Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGTCTACAATTAGCAATGATATGTCGGCTCACTCGGCTGGTTTAGATATTTATCAAATTCAAACTGATAAAACTCAATTCTAAATCAATTTCAAACTCCAAAATAATTCAACCAAATATTTTAGAGAGAGAAAAAACGAAAAGAGTCCAAAACAATGGCCCGAAGAAATGGTGTTTTGCTACCTATTGTTGCCCTTGTTCTTGGTCTACTCGCAATTGGTCTTAGTTTTATTGCTTATTCCAAAAGGATTAAGGTAATTATTTTCTTTTTAATTTTTTTGTTACTCGTTTTTATTTGATTAAAAAAGCTAATTCGGAATTAAGTAATTATTCTTTGATTTATTTTACTAAGTGAAAGAACCAAGCCATCAATTAGGATATTTTTCATGTATGATTATATTTGGATTTTGTACTATGTATACTCAGGTATAAGGTATTTTACATAAAGTCGTATACTCGTACTCCCTCCGTCCCGGAATACTCGACCCGGTTTGACCGGCATAGAATTTAAGGGACTTGAATTGACTTATTTAATTTAATAGGTAGTAGTTGATAGTGGGGTATTATTTTAATGTAGTTAGTGGGAAATGTGTAAAGGGGTGGGGGTTGGGGGAGAGTAAGGGTTGAATTTTTAATTATTTTTTGTATGGAGTAGGGGGTAGGTGGGTTAATAGGGGTGGAGTGAGATATAATATAATATTGTTAGAATATTTCCATTTTTAGAAACAGGTCAAGTATTAAGGGACGGCCCGATAAGGAAAACAGGTCAAGTATTAAGGGACGGCCCGATAAGGAAAACAGGTCAAGTATTCCGGGACGGAGGGAGTATCTAATTGGGACATATACTCCCTCCGTCCCTTAATACTCGCACCGTTTCGACTGGACACGTTTGCCAATGCAAAACTTTGACCACCAATATCTTTAACTACATATTATAAAAATTTATAAAATATTAATATTTTGAAAATATATATTAAGATGAAGCCAACAATATATTATATAATAACATTTATTTTCATATACTATAAATAAAATTGGGTCAAAGTAAATTAGGTGAATAATGCAAAAAGTAGGTGAATAATGCAAAAAGTCAAAGCGGTGCGAGTATTAAGGGACAGAGAGAATATATAGTTAATGAAGTTGCTGGGGGAGGTCGAGTCCTATCGGTCATATTATACCAGGGGTGGCTCGAAAATCAAACTAGTTAGCTATTTAATGTTTTGGAAATGAACCTATGGTAGAGAATACGAGAGATCCGATCTATTTTTACGTCACTAATTTTGTGCCTCATAGAAAGTCAAATACTTATCGCTCCCGGTTGATGACTCATGACTGGAGGGAGGAATTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGCGTGTGTGAGTTAACACCCGGTTCATCTTTAGGCTCCGTTTGGTAAGGCGTTTGGTAAGGCGTTTGGTAAGGCGTAAAACATTTTCATTGTAAAATGATTTTCCAAGGAAAATAGTTTTCAAGGGAAAACACAATTCCAAACTAGTTTTCCTTTGTTTGGTAACTTAAAGGAAAATGGGAGAAAATGGTGAAGATTGAGGGGAAGAAAGGAGAGGGAGGTAAGGAGGAAAGAAGGAAAAGTGGTTTCCCTCCCTTTCAAATGGAAAAGAGTTTTCCATATTTGAGAGAGTAATGGAAAATTATTTTACATCCCTTACCCAACCAAACAACGTAAAATGATTAAAAAGGGGAAAATCGTTTTCCATGAAAACGTTTTACGCCCTACCAAACGGAGCCTTAGAGCTGATTCGGATTCGCGGCAAATTTTGAGTGGATAGATTTCAGTCTCTTACCAATTATTGTTGTGAGATTCGAATACAATGTCATTCTTATTGAGTTCAGCCCCATTATCAATAAACTTATAACATTGTACACAGAACTTCAATTTTAACCTCTAGACAATAAATTTACTGATAAATCCCCTCTAGTATGACTAATACACAATTAGTCTTGGCACCAAAAGCCCAAAAGCAGTTAGGAAGTTAGGATTAAGGCCCAACGGATAGTCAACAGCGCTAATTTATTTTGGTATTCAGCATTGACCAATCGCTAACTGCTGTACCCGGGTACAGCCAGCTCTGGCTGTACCCCCAAAAACGACGCGCTCATATTGTTTGTTCATTCTTGTCGACTGTTTGTTCTTTTTTATTGTACTGTTTGTTCATTCTTATTGTACTGTTTGTTCTTTCTTGTTGTACTGTTTGTTCATTCTTGTTGTACTATTTGTTCTGTCATATTGTTTTTTAAATTCATCATCAAATTTTCATAATTGTTGTATTTTTTGTTCTTTCTTCTGGAATTTTATGTTCTTTTTTATATTGTTTGTTCTTTCTTGTTTATTTGTTTGTTTATAATAATCATATGGTTAATGTTCATAATTAAACTCTTCATTAATCTTTTATTCTTTCTTTTTGTATTGTTTGTTCTTTCTTGTTGTACTGTTTGTTCTTTCTTGTTGTTTTTTAAATTCATTCATCAAACTTATTGTTGTATTGTTTGTTCTTTCATATTGGCTTTAAAATTCGTCATAAAATTGTTCATAATTGTTGTATTGTTTGTTCTTTTTTCTGGAATTTTATGTTCTTTTTTATATTGTTTGTTCTTCTTTGTTTAATTATTTGTTCTTTCTTGTTTATTTGTTTGTTCATAATAAATATATGGTTAATGTTCATAATGAAATTGTTCACTTCATTGGTCTTTTATGTTTTTACAAGCGCCTATATTGTTTATTTCTAAATAAATAAATAAATGTTCATTTCCAAAATAGTAAATGTTCATTCCAAATAAATAAATAAATGTTCATTTCCGAAATAGTAAATGTTCATTTTTGTAGTTTATTTCCAAATAAATAAATAAATGTTCATTTCCAAAATAGAAAATGTTCATTCCAAATAAATAAATAAATGTTCATTTCCGAAATAGTAAATGTTCATTTTTGTACCAGTATATTAATGTTCATTTTAAACAACACAAAACAACATCGTTTTGGATGGAGGTACAGCCAGCTTTGGCTGTACCCGGGTATAGCCAAAAATTTGCGAGCATTGACTATTGAGCTTAAGCGTAGATGCTAGTGGGCGGGCCCACGAGAAAAGCCTAGTTATTTATGATCAACCATTTTCCTTTGTAACCCACTATTAGAGCAACACCAGGGGTCTTATTTTAAAACTTTTTTCATACTTCCTCCGTTTCTGAAAGTTCTTTACGCTTTGGAATACGTGTCCACAACATGAAAACTTTGACCGTAAATTCTCACTATTATATACATCAAAACGTTACATGTAAGATCTTGTTAGATTGTTCTCAGTATGTATTTTCAGAATATCAACTTTTTATAATTTTTCCACGTACGAAATTGGATATATTAGTAGTTAAATATTGCATTGGAGTCCGTGCAAATAGTAACTGTAAAGAACTTTATGAAACGGAGGTAGTATGCCATATTATATTTTCATTAGTATTTAATTAATTAAATTTTATTAAGTCTTCTTCAGACTCTTTTAAATTTAGCTCTTCATCCCTCAAACTCATTTAAAACATCTCAAATAATATTGAGTCTTAGTTTTTCAAGACTCGATTTAAAATTTTGTTAAGACTAACCCACTTCAATGCTACAAAATAACATGTTTGATCTTAAAGCTAGGTGAGTCATGTGTCATGTACTCATGTCTGCTCTTAGCAGCTTAAAGGCATGTATTATGTAACATGTGTTTTATCTTAGCCAAAAACTGCAAACTAACGGTGACTCCAAATATGTCATACATGATAAATTTTGAGTAAACACACACTTGACAAACGTGTATTTGTATGTCAATCAAATAACCACTTTTTAACTCGGTTGTTTTCGTGATCGAGCAGGTTGGAGACGTTTCCAACGTTAACGGGGTATGCAGGTATCCAAGCAGTCCAGCGTTTGCCATAGGCATAATTGCTGCATTAGTTCTTCTGATTGAGCAAATAACAATTAGTGTTGGTATGAGATGCTTTTGCTGTTGTGGAATACGCTGTTCTTCAAAGTGTGGTGCTATTATCTCAATTATCCTCTTCATTTTCTCCTGGTATGTTACTATTTTATACATTAGTTTTTGTCCCAATTCTCTCTCCATTTGTTTTAAAATATTATGGAAACATCTTGTACACACTATAAAATACTACCTAGGTGGTGTGGGCCGGCCCGTCATGCTGTGACGGGCTCGTTACAAATTTCAAGAATGATATTCATGCAAGGCCCATCAACATGTCGGTAGAGCTGGAAAACGTGTCGTGTTGGGTCATGTTCGTGTTCGTGTCGTGTCTAAGCGGGTTGTAAAAGTCTCAACACTAATCCGACCCATTTAATAAACATGTCGTGTCATGTTGACCCGTTTAACTAATCGTGTGTCATACTATCTTGACACTAACCGGTTTTTTTTTTGTCTAGTTCGTGTCGTGTTTGTTCGATAAAGTTGGCTTTATTATAAGGTTTGTAACCGAATACATTAAATTATTGGTTAATTTTTCTTAATCGGTTTAAGTTGTGTCAGTTTCGTGTTTCTCAACACTAACCTGACCCATTTAATTAAACGTTTCGTGTCGTGTTGATCCGTTTAATTAAACGGGTCGTAAACCTTGAGACGAACCTAGTTTTTTCGTGTCCGGTTCATGTCGTGTTATCGTGTCGTGTCAGATTTTGCCAGCTCTACATGTCAGTCATACCATGTTGGGCTTACAATGGGCCCATGACGTGTCGGGTCACCTTTGTGCTGATCTCGGGTAGCCCGTCTACCGACACGGCCGATGCGCGCCCAACTCTTATTTTAAGTGATCAATAAAGCATAGAGTATAGTATAATACACTCATTGAACAAATTAAGCATAGGGACATAGGGTACGTGTATGCTAGATTACATTGTTATAAATATTTGTATATATATTCAAATTACTGAACCGTTACTTTTAACTAATTACGCAGGTTTGCCTTTGTCATAGCATTCATAGGATTGATTTATACTGCAATGCTAAACAACCGCAAATATCTAGTACAAAATCATTCTGAAAACAATATTGACAGTAGCATTTTAGAGGGTGGCATTTGCTACATTGGCAAGGAGAATTTGTTTTTAGGGGATGCAGTTTGGTGCATATTCAGCATTGTTTCGGGTCTCTTCGCGTACAGTTTCCGGGTTTGTGCTACTCGTAACAGAAACAACAATGATAATTACCAAGCTGGTTATGGTAATAATAATGCTGCTAATTATGGACAAACTGGTGTTGCTATGGGACAACCTCCTCATTCTCATTTATCAAAGGACCAAGTATAATGTATATTGTACTTAGTTTGAAGTTTAAATAGTACGAGGTACAATAGACTGTATGTGACTATTATTTTCGAGCGAAGGTTAATATTTGGTATATATGTGTAACACTGTAACATACAATTGTGACACACTTAATTATGAGGAGCTATACACATGCATGAAGTACATTGATTTTTGTAAGGCGAAGTTGGTTTTGACTGTCTTTCTTATATCATATTGTTAAAACAACTACTATACCTTTCATAAATTTAATTAAGGCAAAATTGACTAGAACAACGGTAAGTTATGATCGGATGCATGTGTCTAGCGAGGATAGCTCATGTGCCC CGTCTACAATTAGCAATGATATGTCGGCTCACTCGGCTGGTTTAGATATTTATCAAATTCAAACTGATAAAACTCAATTCTAAATCAATTTCAAACTCCAAAATAATTCAACCAAATATTTTAGAGAGAGAAAAAACGAAAAGAGTCCAAAACAATGGCCCGAAGAAATGGTGTTTTGCTACCTATTGTTGCCCTTGTTCTTGGTCTACTCGCAATTGGTCTTAGTTTTATTGCTTATTCCAAAAGGATTAAGGTTGGAGACGTTTCCAACGTTAACGGGGTATGCAGGTATCCAAGCAGTCCAGCGTTTGCCATAGGCATAATTGCTGCATTAGTTCTTCTGATTGAGCAAATAACAATTAGTGTTGGTATGAGATGCTTTTGCTGTTGTGGAATACGCTGTTCTTCAAAGTGTGGTGCTATTATCTCAATTATCCTCTTCATTTTCTCCTGGTTTGCCTTTGTCATAGCATTCATAGGATTGATTTATACTGCAATGCTAAACAACCGCAAATATCTAGTACAAAATCATTCTGAAAACAATATTGACAGTAGCATTTTAGAGGGTGGCATTTGCTACATTGGCAAGGAGAATTTGTTTTTAGGGGATGCAGTTTGGTGCATATTCAGCATTGTTTCGGGTCTCTTCGCGTACAGTTTCCGGGTTTGTGCTACTCGTAACAGAAACAACAATGATAATTACCAAGCTGGTTATGGTAATAATAATGCTGCTAATTATGGACAAACTGGTGTTGCTATGGGACAACCTCCTCATTCTCATTTATCAAAGGACCAAGTATAATGTATATTGTACTTAGTTTGAAGTTTAAATAGTACGAGGTACAATAGACTGTATGTGACTATTATTTTCGAGCGAAGGTTAATATTTGGTATATATGTGTAACACTGTAACATACAATTGTGACACACTTAATTATGAGGAGCTATACACATGCATGAAGTACATTGATTTTTGTAAGGCGAAGTTGGTTTTGACTGTCTTTCTTATATCATATTGTTAAAACAACTACTATACCTTTCATAAATTTAATTAAGGCAAAATTGACTAGAACAACGGTAAGTTATGATCGGATGCATGTGTCTAGCGAGGATAGCTCATGTGCCC ATGGCCCGAAGAAATGGTGTTTTGCTACCTATTGTTGCCCTTGTTCTTGGTCTACTCGCAATTGGTCTTAGTTTTATTGCTTATTCCAAAAGGATTAAGGTTGGAGACGTTTCCAACGTTAACGGGGTATGCAGGTATCCAAGCAGTCCAGCGTTTGCCATAGGCATAATTGCTGCATTAGTTCTTCTGATTGAGCAAATAACAATTAGTGTTGGTATGAGATGCTTTTGCTGTTGTGGAATACGCTGTTCTTCAAAGTGTGGTGCTATTATCTCAATTATCCTCTTCATTTTCTCCTGGTTTGCCTTTGTCATAGCATTCATAGGATTGATTTATACTGCAATGCTAAACAACCGCAAATATCTAGTACAAAATCATTCTGAAAACAATATTGACAGTAGCATTTTAGAGGGTGGCATTTGCTACATTGGCAAGGAGAATTTGTTTTTAGGGGATGCAGTTTGGTGCATATTCAGCATTGTTTCGGGTCTCTTCGCGTACAGTTTCCGGGTTTGTGCTACTCGTAACAGAAACAACAATGATAATTACCAAGCTGGTTATGGTAATAATAATGCTGCTAATTATGGACAAACTGGTGTTGCTATGGGACAACCTCCTCATTCTCATTTATCAAAGGACCAAGTATAA MARRNGVLLPIVALVLGLLAIGLSFIAYSKRIKVGDVSNVNGVCRYPSSPAFAIGIIAALVLLIEQITISVGMRCFCCCGIRCSSKCGAIISIILFIFSWFAFVIAFIGLIYTAMLNNRKYLVQNHSENNIDSSILEGGICYIGKENLFLGDAVWCIFSIVSGLFAYSFRVCATRNRNNNDNYQAGYGNNNAANYGQTGVAMGQPPHSHLSKDQV Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo02581.1 vs. NCBI nr
Match: gi|902197590|gb|KNA13479.1| (hypothetical protein SOVF_116600 [Spinacia oleracea]) HSP 1 Score: 418.3 bits (1074), Expect = 8.100e-114 Identity = 214/215 (99.53%), Postives = 215/215 (100.00%), Query Frame = 1
BLAST of Spo02581.1 vs. NCBI nr
Match: gi|731321570|ref|XP_010671423.1| (PREDICTED: uncharacterized protein LOC104888225 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 214.2 bits (544), Expect = 2.300e-52 Identity = 120/215 (55.81%), Postives = 153/215 (71.16%), Query Frame = 1
BLAST of Spo02581.1 vs. NCBI nr
Match: gi|731321568|ref|XP_010671422.1| (PREDICTED: uncharacterized protein LOC104888224 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 208.4 bits (529), Expect = 1.300e-50 Identity = 119/214 (55.61%), Postives = 148/214 (69.16%), Query Frame = 1
BLAST of Spo02581.1 vs. NCBI nr
Match: gi|902239164|gb|KNA25471.1| (hypothetical protein SOVF_006380 [Spinacia oleracea]) HSP 1 Score: 174.1 bits (440), Expect = 2.600e-40 Identity = 93/184 (50.54%), Postives = 119/184 (64.67%), Query Frame = 1
BLAST of Spo02581.1 vs. NCBI nr
Match: gi|731322453|ref|XP_010671897.1| (PREDICTED: uncharacterized protein LOC104888572 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 172.2 bits (435), Expect = 1.000e-39 Identity = 104/215 (48.37%), Postives = 134/215 (62.33%), Query Frame = 1
BLAST of Spo02581.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R3F5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_116600 PE=4 SV=1) HSP 1 Score: 418.3 bits (1074), Expect = 5.600e-114 Identity = 214/215 (99.53%), Postives = 215/215 (100.00%), Query Frame = 1
BLAST of Spo02581.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CVA4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g051720 PE=4 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 1.600e-52 Identity = 120/215 (55.81%), Postives = 153/215 (71.16%), Query Frame = 1
BLAST of Spo02581.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CVK2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g051710 PE=4 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 8.800e-51 Identity = 119/214 (55.61%), Postives = 148/214 (69.16%), Query Frame = 1
BLAST of Spo02581.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S146_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_006380 PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 1.800e-40 Identity = 93/184 (50.54%), Postives = 119/184 (64.67%), Query Frame = 1
BLAST of Spo02581.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FJC9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g051690 PE=4 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 7.000e-40 Identity = 104/215 (48.37%), Postives = 134/215 (62.33%), Query Frame = 1
BLAST of Spo02581.1 vs. TAIR (Arabidopsis)
Match: AT5G17210.1 (Protein of unknown function (DUF1218)) HSP 1 Score: 89.7 bits (221), Expect = 2.300e-18 Identity = 78/219 (35.62%), Postives = 110/219 (50.23%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo02581.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo02581.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo02581.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo02581.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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