Spo02653 (gene)

Overview
NameSpo02653
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_00722 : 130308 .. 132238 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGATTCCCTTCTCAAAGAACCGTTCGAGAAGGTGAAAAATAGGAAAAGACCCCACAACATTTCAGCATCTTCGAGCAAGAGACGTTACCTGTCACACCAACTCACGACTTAAAAGGAAAAGAGAAAGTTGACTAGGGCACGAAGAGAAGCCCTGAGAAGGTGGAGATAGTTAGTAATATGTTAAAAACACCCTAGATAATCACTAGTAGAAAAAACCTCAAGTGATTTGAATCAAGTGCTTGGATTTTGTCATTAACCCAAGCACTTAATTGCACATTTTACAAGTGCTTGGGTTTTACTATTTACCCCAAGCACTTAATTGCACATTTTACAAGTGCTTGGGTTTTTATATTTACCCCAAGCACTTGGACCTTCTTCTTAGGTTAATTTTCTATTCGGTGAAACTTCCCTTTGAAAACTTTTCAGGAAACTTTTTTTTTTTAAAGAATTTTCGTAAAACAAAACCCTGCACTTCTCTCCTCTACACCTCCCCACTTCTTCCCCACCACTACCCACGCCAAACTCTCACCACCGTCGTTGCTGCCATCGCCTCTCCTCCCGTGTCCCATCTTATCTCCTCTGATGCGTGCCATCTTATCTTCTCTCCTCTCCTATCTTCTCTCCTCTCTAGCAGCCAAGTTGCCGATTTGTGTACCGCTTAGTACCTCCCCCGCCTCCTCTCCGGCCTGGGGCAAAGAATCGCGCTCACCGCCAGTATCGTCGACTTGCCTCCTACTGGAAACCGCTAAGAGGTTAGCTCATACACCGTTCTGCTGGAAAATCAAATTTCTTTTTGGCCCCAATCAAATTTCTATTGTCAATCCTCGCGAACTAAAACGAAATTCATCTACTCAGGCTCAAAGGTTAGGTTTTCTAATGTAATCGAATTGACTCGTTTCTTTTTCGTATGTTAATGTGTTTATAGCATTATTTTATAAGAATTGATGATTAGCTGTTGGTAGATTTTACTGTAATTGATGCAATATGATTTAATTTCGAGGTTAATTAGGGTTCAAGGACGATTCTAGGACAAAAAATTCAGAAAGATGAATTTGGTGTTCTAAAATAGTATAATCTGATTTGAAGAGCTTATTGAATGAAAGAGAGTATAATCTGCTTTGTGAAATGCGAATTCAGAGAGGCTATGGTTTGGGTGTTATATCCTTCCTGCTGGTAATGGTAGTTTTAATGGTAGGAGCAGGACTAATTAATTTGGTTCTAGTGATGGCAATCAAGTTGATGTGCATACATCATCCTGGTTGTTTACATAATTACATGCTTTTCTGAAAACAACGATGATGATGATTTATTGATTATGCACACATTGTTCGGGCCTTAGTTGAACTGTTCTCTGGTTGTTTCACATGGCAAATTGGCAATAGTTGCTAAGATGAAACATTGGGGCTAATAACCGAGCCACTTTTGACTTTTTTGTTTTGTTTTATTTTTACTGCTAATTTCCTCTCTCATTCTTTGTATTCAGAGCTTGCAAGTCCCATTCTCGGATACCAAGTGTTGTGAGTCGTGACTATATACGCCAGTCATTTAGCTTCTGGTCTCTTATTCAATCATGTATTGCAACTTACAAGCAGAGAACAAATTCGTTTATGATGGATGGCTAGGTAATGATCTAAGCCTTTATGATCCTTTCCTCAATTAGTATCATGAGATTAAGGAAGAAAATGTTCCTAAATATACACCGCTCTTTCTTTGTTTTTGTACTCCTGCTATACAGCTAAACATAAATTAATTCTTAGGATGTACCTTTCCGAGATGTCGTGGCTTATGTGAAGAAGATATATTCAAGGGCGTACCTGGATTTAGCACCCTTCCTGCTTTTAGAAAACATAACCGAAGTTGCGCTTTATGTGATCAAGAGTTAAGATGTCCTAGCCACCATCTCATGAAACCCATTGCCTTCCATTGA

mRNA sequence

ATGTTGATTCCCTTCTCAAAGAACCGTTCGAGAAGAATTTTCGTAAAACAAAACCCTGCACTTCTCTCCTCTACACCTCCCCACTTCTTCCCCACCACTACCCACGCCAAACTCTCACCACCGTCGTTGCTGCCATCGCCTCTCCTCCCGTGTCCCATCTTATCTCCTCTGATGCGTGCCATCTTATCTTCTCTCCTCTCCTATCTTCTCTCCTCTCTAGCAGCCAAGTTGCCGATTTGTGTACCGCTTAGTACCTCCCCCGCCTCCTCTCCGGCCTGGGGCAAAGAATCGCGCTCACCGCCAGTATCGTCGACTTGCCTCCTACTGGAAACCGCTAAGAGGTTAGCTCATACACCGTTCTGCTGGAAAATCAAATTTCTTTTTGGCCCCAATCAAATTTCTATTGTCAATCCTCGCGAACTAAAACGAAATTCATCTACTCAGGCTCAAAGAGCTTGCAAGTCCCATTCTCGGATACCAAGTGTTGTGAGTCAGAACAAATTCGTTTATGATGGATGGCTAGGATGTACCTTTCCGAGATGTCGTGGCTTATGTGAAGAAGATATATTCAAGGGCGTACCTGGATTTAGCACCCTTCCTGCTTTTAGAAAACATAACCGAAGTTGCGCTTTATGTGATCAAGAGTTAAGATGTCCTAGCCACCATCTCATGAAACCCATTGCCTTCCATTGA

Coding sequence (CDS)

ATGTTGATTCCCTTCTCAAAGAACCGTTCGAGAAGAATTTTCGTAAAACAAAACCCTGCACTTCTCTCCTCTACACCTCCCCACTTCTTCCCCACCACTACCCACGCCAAACTCTCACCACCGTCGTTGCTGCCATCGCCTCTCCTCCCGTGTCCCATCTTATCTCCTCTGATGCGTGCCATCTTATCTTCTCTCCTCTCCTATCTTCTCTCCTCTCTAGCAGCCAAGTTGCCGATTTGTGTACCGCTTAGTACCTCCCCCGCCTCCTCTCCGGCCTGGGGCAAAGAATCGCGCTCACCGCCAGTATCGTCGACTTGCCTCCTACTGGAAACCGCTAAGAGGTTAGCTCATACACCGTTCTGCTGGAAAATCAAATTTCTTTTTGGCCCCAATCAAATTTCTATTGTCAATCCTCGCGAACTAAAACGAAATTCATCTACTCAGGCTCAAAGAGCTTGCAAGTCCCATTCTCGGATACCAAGTGTTGTGAGTCAGAACAAATTCGTTTATGATGGATGGCTAGGATGTACCTTTCCGAGATGTCGTGGCTTATGTGAAGAAGATATATTCAAGGGCGTACCTGGATTTAGCACCCTTCCTGCTTTTAGAAAACATAACCGAAGTTGCGCTTTATGTGATCAAGAGTTAAGATGTCCTAGCCACCATCTCATGAAACCCATTGCCTTCCATTGA

Protein sequence

MLIPFSKNRSRRIFVKQNPALLSSTPPHFFPTTTHAKLSPPSLLPSPLLPCPILSPLMRAILSSLLSYLLSSLAAKLPICVPLSTSPASSPAWGKESRSPPVSSTCLLLETAKRLAHTPFCWKIKFLFGPNQISIVNPRELKRNSSTQAQRACKSHSRIPSVVSQNKFVYDGWLGCTFPRCRGLCEEDIFKGVPGFSTLPAFRKHNRSCALCDQELRCPSHHLMKPIAFH
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo02653.1Spo02653.1mRNA


Homology
[Close]
BLAST of Spo02653.1 vs. NCBI nr
Match: gi|902205859|gb|KNA15297.1| (hypothetical protein SOVF_099500 isoform A [Spinacia oleracea])

HSP 1 Score: 209.5 bits (532), Expect = 6.100e-51
Identity = 107/109 (98.17%), Postives = 109/109 (100.00%), Query Frame = 1 

		  

Query: 58  MRAILSSLLSYLLSSLAAKLPICVPLSTSPASSPAWGKESRSPPVSSTCLLLETAKRLAH 117
           MRAILSSLLSYLLSSLAAKLPICVPLSTSPASSPAWGKESRSPPVSSTCLLLETAKRLAH
Sbjct: 1   MRAILSSLLSYLLSSLAAKLPICVPLSTSPASSPAWGKESRSPPVSSTCLLLETAKRLAH 60

Query: 118 TPFCWKIKFLFGPNQISIVNPRELKRNSSTQAQRACKSHSRIPSVVSQN 167
           TPFCWKIKFLFGPNQISIVNPRELKRNSSTQAQRACKSHSRIPSVVS++
Sbjct: 61  TPFCWKIKFLFGPNQISIVNPRELKRNSSTQAQRACKSHSRIPSVVSRD 109
[Close]
BLAST of Spo02653.1 vs. NCBI nr
Match: gi|902205860|gb|KNA15298.1| (hypothetical protein SOVF_099500 isoform B [Spinacia oleracea])

HSP 1 Score: 106.3 bits (264), Expect = 7.200e-20
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 1 

		  

Query: 58  MRAILSSLLSYLLSSLAAKLPICVPLSTSPASSPAWGKESRSPPVSSTCLLLETAKR 115
           MRAILSSLLSYLLSSLAAKLPICVPLSTSPASSPAWGKESRSPPVSSTCLLLETAKR
Sbjct: 1   MRAILSSLLSYLLSSLAAKLPICVPLSTSPASSPAWGKESRSPPVSSTCLLLETAKR 57
[Close]
BLAST of Spo02653.1 vs. NCBI nr
Match: gi|902156625|gb|KNA06030.1| (hypothetical protein SOVF_184850 [Spinacia oleracea])

HSP 1 Score: 68.9 bits (167), Expect = 1.300e-8
Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 1 

		  

Query: 164 SQNKFVYDGWLGCTFPRCRGLCEEDIFKGV 194
           +QNKFVYDGWLGCTFPRCRGLCEEDIF  V
Sbjct: 7   AQNKFVYDGWLGCTFPRCRGLCEEDIFNWV 36
[Close]
BLAST of Spo02653.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R961_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_099500 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 4.200e-51
Identity = 107/109 (98.17%), Postives = 109/109 (100.00%), Query Frame = 1 

		  

Query: 58  MRAILSSLLSYLLSSLAAKLPICVPLSTSPASSPAWGKESRSPPVSSTCLLLETAKRLAH 117
           MRAILSSLLSYLLSSLAAKLPICVPLSTSPASSPAWGKESRSPPVSSTCLLLETAKRLAH
Sbjct: 1   MRAILSSLLSYLLSSLAAKLPICVPLSTSPASSPAWGKESRSPPVSSTCLLLETAKRLAH 60

Query: 118 TPFCWKIKFLFGPNQISIVNPRELKRNSSTQAQRACKSHSRIPSVVSQN 167
           TPFCWKIKFLFGPNQISIVNPRELKRNSSTQAQRACKSHSRIPSVVS++
Sbjct: 61  TPFCWKIKFLFGPNQISIVNPRELKRNSSTQAQRACKSHSRIPSVVSRD 109
[Close]
BLAST of Spo02653.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R701_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_099500 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 5.000e-20
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 1 

		  

Query: 58  MRAILSSLLSYLLSSLAAKLPICVPLSTSPASSPAWGKESRSPPVSSTCLLLETAKR 115
           MRAILSSLLSYLLSSLAAKLPICVPLSTSPASSPAWGKESRSPPVSSTCLLLETAKR
Sbjct: 1   MRAILSSLLSYLLSSLAAKLPICVPLSTSPASSPAWGKESRSPPVSSTCLLLETAKR 57
[Close]
BLAST of Spo02653.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QFK4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_184850 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 8.900e-9
Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 1 

		  

Query: 164 SQNKFVYDGWLGCTFPRCRGLCEEDIFKGV 194
           +QNKFVYDGWLGCTFPRCRGLCEEDIF  V
Sbjct: 7   AQNKFVYDGWLGCTFPRCRGLCEEDIFNWV 36
The following BLAST results are available for this feature:
BLAST of Spo02653.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 3
Match NameE-valueIdentityDescription
gi|902205859|gb|KNA15297.1|6.1e-5198.1hypothetical protein SOVF_0995... [more]
gi|902205860|gb|KNA15298.1|7.2e-20100.hypothetical protein SOVF_0995... [more]
gi|902156625|gb|KNA06030.1|1.3e-890.0hypothetical protein SOVF_1848... [more]
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BLAST of Spo02653.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 3
Match NameE-valueIdentityDescription
A0A0K9R961_SPIOL4.2e-5198.1Uncharacterized protein OS=Spi... [more]
A0A0K9R701_SPIOL5.0e-20100.Uncharacterized protein OS=Spi... [more]
A0A0K9QFK4_SPIOL8.9e-990.0Uncharacterized protein OS=Spi... [more]
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BLAST of Spo02653.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo02653.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo270640.68Barchart | Table
Spo191910.66Barchart | Table
Spo248870.66Barchart | Table