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Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGTAATCTTTGAGAAACGGAAAGAGTAGGATACTACTCCGTAGAAAGCAATTGCAATTACTCGTAAAAGCTATAATTTTCCTTGCATTCAGACTTATAAATACCAATCAGACAAACAAAAATTTGAAAAAGGGAAAAAAAAACGTAGAAGCTTTTTAGTAAGAGTGGGGAAGGATGGTCCAAGAGTGGAACACCACCAAACAGAATAATAAATGATAAGGGTAATCCATGTGTGTCTCTCCAATTGACAGTTGGGTCCTTTATTGGAGAGCCAATCATTGCTGCTACAATCATGGAAATTTGGGGTATCTTCTAAATGTTGTTCATACTCTATTCTCACTTCTTACCCCCTCTTGGGTGGTACGTAGTACTTAGTGGTAACACTACAATAGGTTGTTACAAACATAGTAATGTAAAATTGTGAGAGGTGATATTTATGTGACTTTGAGAGTGAATATAGGGTGTAATTTTACATGTTAAGTCGTTAAGATAACATTTTAATTTGTAAAGAAAGTTGTTTGGTTTAATTTAGTAATATAGGACGTTGTATATGTAATTGTTCATTTACTTTTTCTTTAGGAGGAAGGATATTGAAAGAAAACGCAAATGCATGTTAGACATGAATCCAAACTTGAATTTTTCAATTATTGGATGACTAAAAAATTTATACCATATTCTATAAATTGCAATGGGTTGTAAATTGTGACAATGTAAAAACAATCTCCCATAAAAGGGGAAAAAACTACCTCTTATTCCACGTAACCACTTAAATACTACGTAGTACGGTAGTAGTATACTGTATGCTATTAGCTCTTGGTGCATGTAATCATGTAATGTGTGCAAACATTTTCAAACCCCCAATTTTTATGATAAAAAGTACTCCCTCCGTTCCTAAATATGTGTCCACTTTGGACATGTACACGGTAATTAATAAAATTGAATGGTGTGTAAGAGGTAATGATTGGGATTGTTTTTTTTTTGGAAAGGAAAAAATAGATAATTGTTTATTGATAAAGTATAAATAAAAGTGGAGTGGTGATTGAAAAGTTAGGAAAAGTGTAGAATGTGTAAGAAAAGTTAATAATGATGTATAGAAAAGTGGGAAAAATGTATGGAAAAGTGGGAAAAGTTGGAAAAATGTATAGAAAAGTGGGAAAAGTGTATAGAAAAGTGGAAAAGGTGTATGTCCAAAAACGAAAAGTGGACACATAAAAGGGAACGTCATAAATGGAAACTGGACACGTATTTAGGAACGGAGAGAGTATTAAAGTAATTCTGATAGTTGTAGATAGAGACTTGCTTGTAAACACAAAATTTTCAAGCTTATTAGCTTAATCATTGGAGTGATTTTAATAAATTAGCTTGGGCAAACTAATTTACTAGGAAAAAAGTTCTCCAATACAAATTTAAGTAATAATTAAAATAAAATTGAAATTAAATGGCTAATTGTAAAAATGATACCGTTTGAGTATCAAACTAGTTTGGTAAATTAGCTTGCTATTGGAATACAAACTAGCTCGAAAGTGAAAGTTAATTAACTTAAAATCTTTGGTGGCATAACAAGCTAATTGGACAATTAATTTGCCGTTGAAGTTGCTCTTATTGTTTCATCACTTACCAACATAGAGTTGGTTCAAAGGTAAGCTTGATGCCGCTTAAGGGAGGTCTCGGGTTCGAGAGTCGTCATATGCAGAAACTAACTCTTGTTGGCAGACTCACCCACCACAAGCAAGGTGTGCAACACGGGTCGGATCCGGATGTAGTTGGAGCTATGCTTTGGTGAACCGGGTGCTATGCGTAAAAAAAAATTGTTTCATCACCTAAAAATATTTTTTGACAATTAAAATATGGGTGAGGGTACTATAGATATTTTACGTGACAAAGTTCCTCAAAATATTCTTTATATAATAAAGATGATTAAAATGTTCACAATTTATAAGATAAGTTAATTTCAAAGCTTATATGATAGAGATGATTAAAATGTTCACATTTTATAAGATAAGTTAATTTTAAAGCTACTATGTCCAGATAAGTTAAAATAAGTTACAATAAATGCATATATGTAAAAATCGGATGAAAATATATAAACTCTAAACATAATTTGAAAAAAAAATATAACGGCCAATCTCATAAGTTATATGATATCATTAATGACTGGGTATTGTAAGTTGTGACAATGTGAAAATAATCTTCCATAAAAGGAAAACAATCAACCTTGATCCCATGTAACCACACAAAATTAAAGAGTTCACATTTTATAGACCTCCATACCTAAAACATTATTTAAAGGTTTGTTTCTCTAACTAAAAAATCATAAATGAAAAATGAAAAATGAAAAATGAAAAATAAAGGTAAGAAATAAGAAAACCAACATTTGAAAATTAAAATAAATAATCCGAAATTACAAAAGCACCTCCATCTTGCACCCGAACAAAGGTAAAACTTTGTCAAGTAAGTAGTAGGACTCTGTATTCCAAAGTCTAGAAGGGTCCTCCTCTCTTTGTGTCTTTCCAAAATAACTCAAAAATCTTGTTTCATAGTAGCCACAACAAAATTGTTTTTATACACTATTCAGTCACTCATATTTTCTCTCTCTTCTTTTCTCACCCACATCCACAGAAGCAGACATGGATGACAACAGAAACCCAGAAGAAAACCAACAACAGCCGCAGCAGCTAGTAACCATCTCCCCCTCCGCCGCAACAACCACCAGCAGCAAAGACGACCTTCAACAGAAACAACAGCTACAACAGCAGCTAGCACCAAAGAGAACCTCAAACAAAGACAGACACACAAAAGTGGATGGCCGGAGCAGGAGAATTCGAATGCCAGCACTTTGTGCAGCAAGGGTTTTTCAGCTTACAAGAGAATTAGGCCATAAAACCGATGGCGAAACAATCCAGTGGCTTCTACAACAAGCAGAACCTGCGATCGTTGCTGCTACTGGTAGTGGGACTATCCCAGCTTCGTTCCTTGCTGCGTCGTCTTCCGGTGCGTCTGCGGTTTCGCAACAGGGTGCATCTGTTTCGTTAGGATTACATTCGAAACTTAACGATTTGAGAGCAGGGGTTGAGGTTGGGAATCGGGCGAATTGGGCGAATTTTGGGGATAATTTAGGGAGATCTCAGGTGGGTACATCGATTTGGCCGTCTATTGGAGGTGGGTATGCGCAAGTTTTCGATACCGGGTCGAATTTAGTGAGTCAGAATTCGGGTTATGTGACTAATTTTCAGTTACAAGGGGTTGGATTGCCTACTACTAATATGGGTCTTTTGAGTTTTACGCCGATTTTGGCTAGGGGAACTCAGATTCCCGGCCTTCAACTCGGGCTTTCGCAAGATGGGCATGGTGGTGTTATTGGACAATTATATCAGCAGCAACAACAGCAGCAACAACAGCAACTACAACATCAGCAGCAGCAACACCAAGATCATGAACAAAATAATACAGGTTCGGGTTCGGGTTCGGGTTCCGCAGCAGCAACTGCGGAACCCGTTCACCAACATCAGCAGCAGCAGCAGCAGCAGCATCACTTGCAGTTGCAGTCGCATTCTAATGACAATTCAAGAGAACAATAGATGAGTCACTCATATTTTCTCTCTCTTCTTTTCTCACCCACATCCACAGAAGCAGACATGGATGACAACAGAAACCCAGAAGAAAACCAACAACAGCCGCAGCAGCTAGTAACCATCTCCCCCTCCGCCGCAACAACCACCAGCAGCAAAGACGACCTTCAACAGAAACAACAGCTACAACAGCAGCTAGCACCAAAGAGAACCTCAAACAAAGACAGACACACAAAAGTGGATGGCCGGAGCAGGAGAATTCGAATGCCAGCACTTTGTGCAGCAAGGGTTTTTCAGCTTACAAGAGAATTAGGCCATAAAACCGATGGCGAAACAATCCAGTGGCTTCTACAACAAGCAGAACCTGCGATCGTTGCTGCTACTGGTAGTGGGACTATCCCAGCTTCGTTCCTTGCTGCGTCGTCTTCCGGTGCGTCTGCGGTTTCGCAACAGGGTGCATCTGTTTCGTTAGGATTACATTCGAAACTTAACGATTTGAGAGCAGGGGTTGAGGTTGGGAATCGGGCGAATTGGGCGAATTTTGGGGATAATTTAGGGAGATCTCAGGTGGGTACATCGATTTGGCCGTCTATTGGAGGTGGGTATGCGCAAGTTTTCGATACCGGGTCGAATTTAGTGAGTCAGAATTCGGGTTATGTGACTAATTTTCAGTTACAAGGGGTTGGATTGCCTACTACTAATATGGGTCTTTTGAGTTTTACGCCGATTTTGGCTAGGGGAACTCAGATTCCCGGCCTTCAACTCGGGCTTTCGCAAGATGGGCATGGTGGTGTTATTGGACAATTATATCAGCAGCAACAACAGCAGCAACAACAGCAACTACAACATCAGCAGCAGCAACACCAAGATCATGAACAAAATAATACAGGTTCGGGTTCGGGTTCGGGTTCCGCAGCAGCAACTGCGGAACCCGTTCACCAACATCAGCAGCAGCAGCAGCAGCAGCATCACTTGCAGTTGCAGTCGCATTCTAATGACAATTCAAGAGAACAATAG ATGAGTCACTCATATTTTCTCTCTCTTCTTTTCTCACCCACATCCACAGAAGCAGACATGGATGACAACAGAAACCCAGAAGAAAACCAACAACAGCCGCAGCAGCTAGTAACCATCTCCCCCTCCGCCGCAACAACCACCAGCAGCAAAGACGACCTTCAACAGAAACAACAGCTACAACAGCAGCTAGCACCAAAGAGAACCTCAAACAAAGACAGACACACAAAAGTGGATGGCCGGAGCAGGAGAATTCGAATGCCAGCACTTTGTGCAGCAAGGGTTTTTCAGCTTACAAGAGAATTAGGCCATAAAACCGATGGCGAAACAATCCAGTGGCTTCTACAACAAGCAGAACCTGCGATCGTTGCTGCTACTGGTAGTGGGACTATCCCAGCTTCGTTCCTTGCTGCGTCGTCTTCCGGTGCGTCTGCGGTTTCGCAACAGGGTGCATCTGTTTCGTTAGGATTACATTCGAAACTTAACGATTTGAGAGCAGGGGTTGAGGTTGGGAATCGGGCGAATTGGGCGAATTTTGGGGATAATTTAGGGAGATCTCAGGTGGGTACATCGATTTGGCCGTCTATTGGAGGTGGGTATGCGCAAGTTTTCGATACCGGGTCGAATTTAGTGAGTCAGAATTCGGGTTATGTGACTAATTTTCAGTTACAAGGGGTTGGATTGCCTACTACTAATATGGGTCTTTTGAGTTTTACGCCGATTTTGGCTAGGGGAACTCAGATTCCCGGCCTTCAACTCGGGCTTTCGCAAGATGGGCATGGTGGTGTTATTGGACAATTATATCAGCAGCAACAACAGCAGCAACAACAGCAACTACAACATCAGCAGCAGCAACACCAAGATCATGAACAAAATAATACAGGTTCGGGTTCGGGTTCGGGTTCCGCAGCAGCAACTGCGGAACCCGTTCACCAACATCAGCAGCAGCAGCAGCAGCAGCATCACTTGCAGTTGCAGTCGCATTCTAATGACAATTCAAGAGAACAATAG MSHSYFLSLLFSPTSTEADMDDNRNPEENQQQPQQLVTISPSAATTTSSKDDLQQKQQLQQQLAPKRTSNKDRHTKVDGRSRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPAIVAATGSGTIPASFLAASSSGASAVSQQGASVSLGLHSKLNDLRAGVEVGNRANWANFGDNLGRSQVGTSIWPSIGGGYAQVFDTGSNLVSQNSGYVTNFQLQGVGLPTTNMGLLSFTPILARGTQIPGLQLGLSQDGHGGVIGQLYQQQQQQQQQQLQHQQQQHQDHEQNNTGSGSGSGSAAATAEPVHQHQQQQQQQHHLQLQSHSNDNSREQ Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo02702.1 vs. NCBI nr
Match: gi|902219192|gb|KNA18243.1| (hypothetical protein SOVF_071500 [Spinacia oleracea]) HSP 1 Score: 584.7 bits (1506), Expect = 1.000e-163 Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 1
BLAST of Spo02702.1 vs. NCBI nr
Match: gi|870844812|gb|KMS97688.1| (hypothetical protein BVRB_5g124720 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 429.9 bits (1104), Expect = 4.200e-117 Identity = 248/324 (76.54%), Postives = 268/324 (82.72%), Query Frame = 1
BLAST of Spo02702.1 vs. NCBI nr
Match: gi|719983013|ref|XP_010250638.1| (PREDICTED: transcription factor TCP20 [Nelumbo nucifera]) HSP 1 Score: 243.4 bits (620), Expect = 5.500e-61 Identity = 155/303 (51.16%), Postives = 202/303 (66.67%), Query Frame = 1
BLAST of Spo02702.1 vs. NCBI nr
Match: gi|1009152201|ref|XP_015893968.1| (PREDICTED: transcription factor TCP20-like [Ziziphus jujuba]) HSP 1 Score: 238.8 bits (608), Expect = 1.400e-59 Identity = 154/288 (53.47%), Postives = 192/288 (66.67%), Query Frame = 1
BLAST of Spo02702.1 vs. NCBI nr
Match: gi|590647518|ref|XP_007031923.1| (Teosinte branched 1 [Theobroma cacao]) HSP 1 Score: 231.9 bits (590), Expect = 1.700e-57 Identity = 156/289 (53.98%), Postives = 193/289 (66.78%), Query Frame = 1
BLAST of Spo02702.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RFH8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_071500 PE=4 SV=1) HSP 1 Score: 584.7 bits (1506), Expect = 7.100e-164 Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 1
BLAST of Spo02702.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BC90_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g124720 PE=4 SV=1) HSP 1 Score: 429.9 bits (1104), Expect = 2.900e-117 Identity = 248/324 (76.54%), Postives = 268/324 (82.72%), Query Frame = 1
BLAST of Spo02702.1 vs. UniProtKB/TrEMBL
Match: A0A061EKM4_THECC (Teosinte branched 1 OS=Theobroma cacao GN=TCM_017259 PE=4 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 1.200e-57 Identity = 156/289 (53.98%), Postives = 193/289 (66.78%), Query Frame = 1
BLAST of Spo02702.1 vs. UniProtKB/TrEMBL
Match: F6H463_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0068g01690 PE=4 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 8.300e-56 Identity = 151/298 (50.67%), Postives = 193/298 (64.77%), Query Frame = 1
BLAST of Spo02702.1 vs. UniProtKB/TrEMBL
Match: M5WYR6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009925mg PE=4 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 8.300e-56 Identity = 138/259 (53.28%), Postives = 178/259 (68.73%), Query Frame = 1
BLAST of Spo02702.1 vs. ExPASy Swiss-Prot
Match: TCP20_ARATH (Transcription factor TCP20 OS=Arabidopsis thaliana GN=TCP20 PE=1 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 6.600e-46 Identity = 137/293 (46.76%), Postives = 178/293 (60.75%), Query Frame = 1
BLAST of Spo02702.1 vs. ExPASy Swiss-Prot
Match: TCP15_ARATH (Transcription factor TCP15 OS=Arabidopsis thaliana GN=TCP15 PE=1 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 3.600e-28 Identity = 77/141 (54.61%), Postives = 99/141 (70.21%), Query Frame = 1
BLAST of Spo02702.1 vs. ExPASy Swiss-Prot
Match: TCP14_ARATH (Transcription factor TCP14 OS=Arabidopsis thaliana GN=TCP14 PE=1 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 3.600e-28 Identity = 78/150 (52.00%), Postives = 104/150 (69.33%), Query Frame = 1
BLAST of Spo02702.1 vs. ExPASy Swiss-Prot
Match: TCP8_ARATH (Transcription factor TCP8 OS=Arabidopsis thaliana GN=TCP8 PE=1 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.500e-26 Identity = 74/133 (55.64%), Postives = 85/133 (63.91%), Query Frame = 1
BLAST of Spo02702.1 vs. ExPASy Swiss-Prot
Match: PCF3_ORYSJ (Transcription factor PCF3 OS=Oryza sativa subsp. japonica GN=PCF3 PE=2 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 5.800e-26 Identity = 70/119 (58.82%), Postives = 84/119 (70.59%), Query Frame = 1
BLAST of Spo02702.1 vs. TAIR (Arabidopsis)
Match: AT3G27010.1 (TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20) HSP 1 Score: 186.0 bits (471), Expect = 3.700e-47 Identity = 137/293 (46.76%), Postives = 178/293 (60.75%), Query Frame = 1
BLAST of Spo02702.1 vs. TAIR (Arabidopsis)
Match: AT1G69690.1 (TCP family transcription factor ) HSP 1 Score: 127.1 bits (318), Expect = 2.000e-29 Identity = 77/141 (54.61%), Postives = 99/141 (70.21%), Query Frame = 1
BLAST of Spo02702.1 vs. TAIR (Arabidopsis)
Match: AT3G47620.1 (TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14) HSP 1 Score: 127.1 bits (318), Expect = 2.000e-29 Identity = 78/150 (52.00%), Postives = 104/150 (69.33%), Query Frame = 1
BLAST of Spo02702.1 vs. TAIR (Arabidopsis)
Match: AT1G58100.1 (TCP family transcription factor ) HSP 1 Score: 121.7 bits (304), Expect = 8.600e-28 Identity = 74/133 (55.64%), Postives = 85/133 (63.91%), Query Frame = 1
BLAST of Spo02702.1 vs. TAIR (Arabidopsis)
Match: AT5G23280.1 (TCP family transcription factor ) HSP 1 Score: 118.2 bits (295), Expect = 9.500e-27 Identity = 65/107 (60.75%), Postives = 78/107 (72.90%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo02702.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo02702.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo02702.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo02702.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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