Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTGCTGTGGTGGTAACTGTGGTTGTGGATCTAGCTGCGGTTGCGGCAGCAGCTGTGGAGGGTAATTTTTTTCCGTTTTCTTTTTTGTTTCTTTTTCAGATTTTTAAGTGAATCATCATCGTTTTTGACAGAGATGTCCGGATACAAGATATATTTTTGTATTTCTACAAATTAGGTTGTGATTATGTCTTAAATTACTTTTTTGTTGTTTATGTACTAGATTTTATCAAGAAATCGCGAGGGTTGAGATTTGGTCATGTCCTTCTCCTTGTTTTTTTTGAAAAAAAATGGACGATCAGTTTAAATTTTGTTATTGTATACTCCGTAATTCAATTAAATAATTGGGTTATTGTAAAATGTTGATTTAGGTGCAAGATGTTCCCTGACTTTGTGGAGAACGCCTCCAACCCCACCGTCCTCGTCTCTGGTGTTGCTCCCAAGATCTCGTAAGTCCTTTTCCCCCTTCAAGTTGCAGATCATTTGGCATTTTGAGCTTAGTACAAAAAGTTGATTAAATCTTCTAATTATACAATGATAAAGTATAATTATTTGATCAATTGTAATTACAAGTCCCACACTCCCACGTTAAATGATCTAGTTAAATAATGTTTGATTTTAAATGAGAGTTTGTGTAATTGAAACTGTGTTTCTGGTTATTAGCAACAAAAATGTTTGATTTAGCTTAATATATTCTCCTTTTATAATAAAAATTAGGAGTAATTAATAATGTTGTGAAATGAAAACAGGTTCTCTGAAGGAGCAGAGATGGGAGTGGCTGCTGAGAATGGCTGCAAGTGCGGTGCTAACTGCCAGTGCGACCCTTGCACCTGCAAATGA ATGTCTTGCTGTGGTGGTAACTGTGGTTGTGGATCTAGCTGCGGTTGCGGCAGCAGCTGTGGAGGGTGCAAGATGTTCCCTGACTTTGTGGAGAACGCCTCCAACCCCACCGTCCTCGTCTCTGGTGTTGCTCCCAAGATCTCGTTCTCTGAAGGAGCAGAGATGGGAGTGGCTGCTGAGAATGGCTGCAAGTGCGGTGCTAACTGCCAGTGCGACCCTTGCACCTGCAAATGA ATGTCTTGCTGTGGTGGTAACTGTGGTTGTGGATCTAGCTGCGGTTGCGGCAGCAGCTGTGGAGGGTGCAAGATGTTCCCTGACTTTGTGGAGAACGCCTCCAACCCCACCGTCCTCGTCTCTGGTGTTGCTCCCAAGATCTCGTTCTCTGAAGGAGCAGAGATGGGAGTGGCTGCTGAGAATGGCTGCAAGTGCGGTGCTAACTGCCAGTGCGACCCTTGCACCTGCAAATGA MSCCGGNCGCGSSCGCGSSCGGCKMFPDFVENASNPTVLVSGVAPKISFSEGAEMGVAAENGCKCGANCQCDPCTCK Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo02904.1 vs. NCBI nr
Match: gi|902216507|gb|KNA17504.1| (hypothetical protein SOVF_079210 isoform A [Spinacia oleracea]) HSP 1 Score: 150.6 bits (379), Expect = 1.100e-33 Identity = 73/77 (94.81%), Postives = 73/77 (94.81%), Query Frame = 1
BLAST of Spo02904.1 vs. NCBI nr
Match: gi|583984333|gb|AHI62953.1| (metallothionein [Halostachys caspica]) HSP 1 Score: 138.3 bits (347), Expect = 5.800e-30 Identity = 64/78 (82.05%), Postives = 70/78 (89.74%), Query Frame = 1
BLAST of Spo02904.1 vs. NCBI nr
Match: gi|332901279|gb|AEF01492.1| (metallothionein [Salicornia brachiata]) HSP 1 Score: 136.7 bits (343), Expect = 1.700e-29 Identity = 62/78 (79.49%), Postives = 72/78 (92.31%), Query Frame = 1
BLAST of Spo02904.1 vs. NCBI nr
Match: gi|731310618|ref|XP_010667708.1| (PREDICTED: metallothionein-like protein type 2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 136.0 bits (341), Expect = 2.900e-29 Identity = 63/78 (80.77%), Postives = 69/78 (88.46%), Query Frame = 1
BLAST of Spo02904.1 vs. NCBI nr
Match: gi|14268756|gb|AAK57884.1|AF268027_1 (metallothionein [Amaranthus cruentus]) HSP 1 Score: 131.7 bits (330), Expect = 5.400e-28 Identity = 62/78 (79.49%), Postives = 68/78 (87.18%), Query Frame = 1
BLAST of Spo02904.1 vs. UniProtKB/TrEMBL
Match: A0A0K9REW1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_079210 PE=4 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 7.800e-34 Identity = 73/77 (94.81%), Postives = 73/77 (94.81%), Query Frame = 1
BLAST of Spo02904.1 vs. UniProtKB/TrEMBL
Match: W6AWJ0_9CARY (Metallothionein OS=Halostachys caspica PE=2 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 4.000e-30 Identity = 64/78 (82.05%), Postives = 70/78 (89.74%), Query Frame = 1
BLAST of Spo02904.1 vs. UniProtKB/TrEMBL
Match: F6M9W8_9CARY (Metallothionein OS=Salicornia brachiata GN=MT-2 PE=2 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 1.200e-29 Identity = 62/78 (79.49%), Postives = 72/78 (92.31%), Query Frame = 1
BLAST of Spo02904.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FWH8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g000270 PE=4 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 2.000e-29 Identity = 63/78 (80.77%), Postives = 69/78 (88.46%), Query Frame = 1
BLAST of Spo02904.1 vs. UniProtKB/TrEMBL
Match: Q94G67_AMACR (Metallothionein OS=Amaranthus cruentus PE=2 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 3.800e-28 Identity = 62/78 (79.49%), Postives = 68/78 (87.18%), Query Frame = 1
BLAST of Spo02904.1 vs. ExPASy Swiss-Prot
Match: MT2_ACTDE (Metallothionein-like protein type 2 OS=Actinidia deliciosa GN=pKIWI504 PE=2 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 3.600e-24 Identity = 52/78 (66.67%), Postives = 62/78 (79.49%), Query Frame = 1
BLAST of Spo02904.1 vs. ExPASy Swiss-Prot
Match: MT2_CICAR (Metallothionein-like protein 2 OS=Cicer arietinum PE=3 SV=2) HSP 1 Score: 103.2 bits (256), Expect = 1.300e-21 Identity = 54/80 (67.50%), Postives = 61/80 (76.25%), Query Frame = 1
BLAST of Spo02904.1 vs. ExPASy Swiss-Prot
Match: MT2A_ORYSJ (Metallothionein-like protein 2A OS=Oryza sativa subsp. japonica GN=MT2A PE=2 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 4.900e-21 Identity = 47/80 (58.75%), Postives = 54/80 (67.50%), Query Frame = 1
BLAST of Spo02904.1 vs. ExPASy Swiss-Prot
Match: MT2_MALDO (Metallothionein-like protein type 2 OS=Malus domestica GN=MT1 PE=3 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 3.200e-20 Identity = 50/78 (64.10%), Postives = 57/78 (73.08%), Query Frame = 1
BLAST of Spo02904.1 vs. ExPASy Swiss-Prot
Match: MT2B_SOLLC (Metallothionein-like protein type 2 B OS=Solanum lycopersicum GN=MTB PE=2 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 9.200e-20 Identity = 47/80 (58.75%), Postives = 60/80 (75.00%), Query Frame = 1
BLAST of Spo02904.1 vs. TAIR (Arabidopsis)
Match: AT3G09390.1 (metallothionein 2A) HSP 1 Score: 89.0 bits (219), Expect = 1.400e-18 Identity = 44/81 (54.32%), Postives = 52/81 (64.20%), Query Frame = 1
BLAST of Spo02904.1 vs. TAIR (Arabidopsis)
Match: AT5G02380.1 (metallothionein 2B) HSP 1 Score: 87.8 bits (216), Expect = 3.100e-18 Identity = 44/79 (55.70%), Postives = 58/79 (73.42%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo02904.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo02904.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo02904.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo02904.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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