Spo02915 (gene) | SpinachBase

Overview


Name	Spo02915
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Serine/arginine repetitive matrix protein 2, putative isoform 2
Location	chr2 : 24091433 .. 24095788 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGACCTCGGACCCTGCTCAAATAGCTCACGAACACACACCAAGATCTCTATAAATATGTAAAATATCCTTTCACTTATCATTACTCCTTATCAATCAAGAAAACCCCCCAAATATCTTGTTAGCTTTTTTGCAAAGAAACGCTGAATATAATATCATCCAAAACCGCTCTAGTAATAAGTCGGTGTTGTCGTGCGCAGGTACAAAACCCGTACGCTATCAGCTCATATATTCTTCCCCAATTCAACAAAATCTCGTTTTCTCTCTCCTCTCCCATCAATGGCACGTCGGTTTTCCCAATACCTAACCACCACCCTCTCCTCCTCCTCCGTCGCATCAACCACCCTTCTAAAACTCCTCCCAAGTTCTCTATGCTCCCCATTTTTGTCCCACCCTAGAAATCACCTCTCCACAAAAGCCCGCCTAATCGAAATCGACCTTGAATCCTCCGATGGCGGTGAAATCGAGGTGATAGGGTTGAAGAAGCTTGAAGATGCTATCCACGGTATCTTCGTACGAAGGCTCGCACCCGATTGGCTCCCTCTCCGGCCAGGTTCCTCTTACTGGGTCCCACCTAAACGATCCTCCGACAACATTATTGAGATTGTGGAGAGGCTCACTAATCCTTTGACTGAGGAGGAGTGTCTTTCTCTCTCCTCTACTCGTGGTTGGCCCTCCTCCTCTTTCTTCTTTGAAGGTACTTCCCCTTATTAGCTTTTTGTTTTCAATTATAATGGCTTCCATTTCTTCTTAATTGTTAGAATTGATTCATGTTATTTTAGGTTTATATGATCATTTATGTGTTGATGTTTTATTGTGGTTAAAATGCTGTATTGATTCGACACGGTTTGATTTCAGTGATCGATTGATCGATCTGGAGAATTGGGTTTGATACTTTGAACACAATATTATGAACTTTAGACATATTAAGTAATAGTTTTTGCATTCGTTGAGACTATTTTGGGATGTCCGGAAAGAGTTGGCAAATAGATTGAGTGATGACACAGTCTATGGTAACTTACTAATTTGTAAAGATGTGAACTTTTTTTTACTAGAGTGCATCATCGGGTTAAGAATGGTGAGAAACGATCCTCTTGGTACCTCAAACCCACTAAAAAAAGGTGATTGTGTATTTGTGTTAGTGGGACTCTTGCAGGTAATGAGAAGCTCAAAAAATGGAGAGACAATGTGGCGATTATATCTGAAGAAAAGGCTATATTTTTGTGAAGGGAACATCATAGAGTTATTTGAACAGTATAGGATATAGTCACTTTTTTTTGGGTTTAGGTTGAAGTGTTTGTGTTAAAACAAGTGTTTAGGACGGTTGTCTACATCGAGAAGTGATGATTATTGGTGAAAAAATCATTTGAAGGTATGTGATTGAGTTGAGGATAACCTGGATTTTAGCAATGGCGACTTATGGTGGGCTTCAAGAGTTCAAGTTCTTTAGGACAGTGTGTTTATTCCCCGAGTTCAAGTACATAAGTTTAAGATGTAAGTCGAACTGGTTATCTATTGCCTTGTAAGCAAAAAAAAAAGATAATTTTCTGAACTTTCTTGTTTTTTTGTGTGGTACAATTCATTGGTCTTCTACACTAGAATTCTAATGCTTACAAAATCAGAAAGAGCTCCTTGACTAGAACCTGGCTTTCAATCCTCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNGACTTGTGTCTTTGACATGTTATGGATGATAAAGCTTACTTCTAAAAATTATGTAATGTGGATTGAGAGGACGTGTTCAGACTGTTAGTACATTCCCCCTATATATCCCATCTCTTTCTGATTTACGAAAAACTTGGTTAATGAACCATATGTCCATGTACAACAATAATCTAATGCCCTCTGACCTTCAGAGAGTTTTTTTTTGGGTTAAGGGAAATCTATTGGGGTTGTTGTAACTTGCCTTGCGTTTTGAGCTGATATTAAGAGATAATGGAGCACCAGCTAAAGAGATTGAGCTGGATCCTTTCTGCCAAAGTTCAATTCCAAATGTAGCAGACTAGCCGTGTAGAATAACTTTCAGACTGTTTCTTCCCTACCTAACTGATTGCGTGATCATTGACCTTCAGGGACTTGACTTCTGAGTTCTCACTAAGTGCAATATCAATCCGAGTAGGAGGTGCAGAATTAAAAACTAGCTATCTTCAAATGCTATAATTGGCTTTTTTGGCAGGCCCATGTACCGCCAGGCTGCATTTTTCCCTTTTATCTTTTTCCTGAGGTTTGTAATTTCAGTGAGTAAGCCTTTAGCATTCCTCTGCATTTTCTGTGTATCTGAGCAAAAATTCTGTCCTCCGGTCATGCATTTAGTGGATTTATGTGTAGTAGTTAGCTAATATGTTATATTATTAAGAATTAACGACCCCTCTGTTAATACGGCGTTCTTATAAAGGTTGTAAGGTAGTACAGTTGTTTAAGATTCATGAAGAGGGAACCTCGGAGCCCCTTCCAGAGTTCCAGTTAAGGAAGTATAAACTAAACTGCCCTAAAACTTCAAAGGGTAACATGTAGTTAGTACAGTAGTGTTATGTAAATGTAATATTATTTGACTGATTGATTTCTAGTTGAAAAAAGAGGCTCGAGCTGTCCTTTACAGACCTTTTTCACCGTAAGACGGCAGCCTCTTAACATTCATCACGCCTTTGAAAAAGGAGGCATATTTTACGGGAAAAAGGGATTGTTAATGGAAGTTCCTTACCCACTAATTCTTATTTGGGTTCCTCTGCATGCTTTACTGTAGAAATATCAACTCTCAAGTCTGAAGTACAGGAAAAGTTGATAAATGCCTTATTTTAGTCCCTGGCCATTTCTTCAGTCAGATTATCTCTTCGTCGTTAACTATGCTTTCTTGCTTTTGGTGACAGGGTCAATCAGACATAGCACTCCTGTGCAAGTAGAGGTGCAGGTACATGACTCGAGCAACTTAGGGAAGCCATCAGTATCTGAGGATGAGGAGTAATGATCTGTATTTATGGCCAGTTTACTCTCTAGCAGACGTCTGATGGTAAGCAGTATCCAGTGTCTGTATTTTTAGCGTAGATCTGAAAGCCATTTGGTGTACGATGTACCCCCCATTCCCCCAAAACCATGATAGCAGGTTTTTCAATTTGCATATATTGGTGCTGAATTCTACTGTGAGCTCAGGATTCTGGTTATATCTGTTGGGTTGATAAATTTCTGCAGTCTGATGTATTTGTAGCATCTTTGCTCAATTAGAACAGTTGTTATAAATGAATGTGTATTTAGGAAATCTCGTAGAAAACTCGACTTATTATGAATCGTAATACCCTGTATGTTCAAGTTTGTGTCTGAAAACCTGGTTGAATGTCTGTTCCTCCTATAGGATTCCAACTTTTCCCGTAACATCATAACTGTTATCGCTCTTTTTTTTTGGATAATCTATTACTAAAAACAGATGAAATGTTAATTTGACTCTGGAATCTGGTCCAAGAAACCTTTATCTTTCACTATGTTGATTATAAGCTATGGGTGTGTGTAAAGGCTTGTTGTTTCTCCTTAGTTGATTGTATGCGTGTAATTGTATTTTCTCTTACAGATATACTGTTCGAATCTACAGGCTTCTGCTCGTGCAAGGGTTGATCACGAAGTCATGAAACATTTATTCTGGAAGGCAAACAACACAAGTATACTGGCATTTGTACATAATTGTAACCTGTAGTTTCCGCAGCAAAAAAGTTTACTGTCACCTTTTTCTGATGTCCATATGGTAAAGCTAGGTTAGTTGTGGAAACTCATCCTGTATTTGTTTCTTGCACATCGACTCAGGAGAAAAATAAATACAAGTGTGATCTAATTTATGCGGGAGCATTTCTACATTCTGACTCAAATCTTGTGTTTTTTTTTAACTGTTTTTTCCATGTTTGTCTTATGTTGCAGTCATTTTAGCCGATGCAAATTTAATTAGGATACTAATGTTTTAGTGTTTTGATTGTCAAACATTCGACTATTTTCTGTTGTATTGTGGATTTGGCCTGAAATAGCAAGGCAAAACCTCTGATTCCCTTTTAGCATATTACCGTGTCTAAGCAAAGTAAAACTCAAGTTTTTTGTATTCATTATATCCAACTGAGTCTGAATATATA

mRNA sequence

ACGACCTCGGACCCTGCTCAAATAGCTCACGAACACACACCAAGATCTCTATAAATATGTAAAATATCCTTTCACTTATCATTACTCCTTATCAATCAAGAAAACCCCCCAAATATCTTGTTAGCTTTTTTGCAAAGAAACGCTGAATATAATATCATCCAAAACCGCTCTAGTAATAAGTCGGTGTTGTCGTGCGCAGGTACAAAACCCGTACGCTATCAGCTCATATATTCTTCCCCAATTCAACAAAATCTCGTTTTCTCTCTCCTCTCCCATCAATGGCACGTCGGTTTTCCCAATACCTAACCACCACCCTCTCCTCCTCCTCCGTCGCATCAACCACCCTTCTAAAACTCCTCCCAAGTTCTCTATGCTCCCCATTTTTGTCCCACCCTAGAAATCACCTCTCCACAAAAGCCCGCCTAATCGAAATCGACCTTGAATCCTCCGATGGCGGTGAAATCGAGGTGATAGGGTTGAAGAAGCTTGAAGATGCTATCCACGGTATCTTCGTACGAAGGCTCGCACCCGATTGGCTCCCTCTCCGGCCAGGTTCCTCTTACTGGGTCCCACCTAAACGATCCTCCGACAACATTATTGAGATTGTGGAGAGGCTCACTAATCCTTTGACTGAGGAGGAGTGTCTTTCTCTCTCCTCTACTCGTGGTTGGCCCTCCTCCTCTTTCTTCTTTGAAGGGTCAATCAGACATAGCACTCCTGTGCAAGTAGAGGTGCAGGTACATGACTCGAGCAACTTAGGGAAGCCATCAGTATCTGAGGATGAGGAGTAATGATCTGTATTTATGGCCAGTTTACTCTCTAGCAGACGTCTGATGGCTTCTGCTCGTGCAAGGGTTGATCACGAAGTCATGAAACATTTATTCTGGAAGGCAAACAACACAAGTATACTGGCATTTGTACATAATTGTAACCTGTAGTTTCCGCAGCAAAAAAGTTTACTGTCACCTTTTTCTGATGTCCATATGGTAAAGCTAGGTTAGTTGTGGAAACTCATCCTGTATTTGTTTCTTGCACATCGACTCAGGAGAAAAATAAATACAAGTGTGATCTAATTTATGCGGGAGCATTTCTACATTCTGACTCAAATCTTGTGTTTTTTTTTAACTGTTTTTTCCATGTTTGTCTTATGTTGCAGTCATTTTAGCCGATGCAAATTTAATTAGGATACTAATGTTTTAGTGTTTTGATTGTCAAACATTCGACTATTTTCTGTTGTATTGTGGATTTGGCCTGAAATAGCAAGGCAAAACCTCTGATTCCCTTTTAGCATATTACCGTGTCTAAGCAAAGTAAAACTCAAGTTTTTTGTATTCATTATATCCAACTGAGTCTGAATATATA

Coding sequence (CDS)

ATGGCACGTCGGTTTTCCCAATACCTAACCACCACCCTCTCCTCCTCCTCCGTCGCATCAACCACCCTTCTAAAACTCCTCCCAAGTTCTCTATGCTCCCCATTTTTGTCCCACCCTAGAAATCACCTCTCCACAAAAGCCCGCCTAATCGAAATCGACCTTGAATCCTCCGATGGCGGTGAAATCGAGGTGATAGGGTTGAAGAAGCTTGAAGATGCTATCCACGGTATCTTCGTACGAAGGCTCGCACCCGATTGGCTCCCTCTCCGGCCAGGTTCCTCTTACTGGGTCCCACCTAAACGATCCTCCGACAACATTATTGAGATTGTGGAGAGGCTCACTAATCCTTTGACTGAGGAGGAGTGTCTTTCTCTCTCCTCTACTCGTGGTTGGCCCTCCTCCTCTTTCTTCTTTGAAGGGTCAATCAGACATAGCACTCCTGTGCAAGTAGAGGTGCAGGTACATGACTCGAGCAACTTAGGGAAGCCATCAGTATCTGAGGATGAGGAGTAA

Protein sequence

MARRFSQYLTTTLSSSSVASTTLLKLLPSSLCSPFLSHPRNHLSTKARLIEIDLESSDGGEIEVIGLKKLEDAIHGIFVRRLAPDWLPLRPGSSYWVPPKRSSDNIIEIVERLTNPLTEEECLSLSSTRGWPSSSFFFEGSIRHSTPVQVEVQVHDSSNLGKPSVSEDEE

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo02915.1	Spo02915.1	mRNA

Homology

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BLAST of Spo02915.1 vs. NCBI nr
Match: gi|902230167|gb|KNA21743.1| (hypothetical protein SOVF_040400 [Spinacia oleracea])

HSP 1 Score: 334.3 bits (856), Expect = 1.200e-88
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1

		  
Query: 1   MARRFSQYLTTTLSSSSVASTTLLKLLPSSLCSPFLSHPRNHLSTKARLIEIDLESSDGG 60
           MARRFSQYLTTTLSSSSVASTTLLKLLPSSLCSPFLSHPRNHLSTKARLIEIDLESSDGG
Sbjct: 1   MARRFSQYLTTTLSSSSVASTTLLKLLPSSLCSPFLSHPRNHLSTKARLIEIDLESSDGG 60

Query: 61  EIEVIGLKKLEDAIHGIFVRRLAPDWLPLRPGSSYWVPPKRSSDNIIEIVERLTNPLTEE 120
           EIEVIGLKKLEDAIHGIFVRRLAPDWLPLRPGSSYWVPPKRSSDNIIEIVERLTNPLTEE
Sbjct: 61  EIEVIGLKKLEDAIHGIFVRRLAPDWLPLRPGSSYWVPPKRSSDNIIEIVERLTNPLTEE 120

Query: 121 ECLSLSSTRGWPSSSFFFEGSIRHSTPVQVEVQVHDSSNLGKPSVSEDEE 171
           ECLSLSSTRGWPSSSFFFEGSIRHSTPVQVEVQVHDSSNLGKPSVSEDEE
Sbjct: 121 ECLSLSSTRGWPSSSFFFEGSIRHSTPVQVEVQVHDSSNLGKPSVSEDEE 170

[Close]

BLAST of Spo02915.1 vs. NCBI nr
Match: gi|731354110|ref|XP_010688408.1| (PREDICTED: uncharacterized protein LOC104902353 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 201.4 bits (511), Expect = 1.200e-48
Identity = 113/173 (65.32%), Postives = 128/173 (73.99%), Query Frame = 1

		  
Query: 1   MARRFSQYLTTTLSSSSVASTTLLKLLPSSLCSPFLSHPRNHLSTKARLIEIDLESS--D 60
           MAR+ S+ LT+ L             LP SL S   S       +KARLIE+DL+SS  +
Sbjct: 1   MARQLSKTLTSNL-------------LPISLSSRVFS-------SKARLIEVDLDSSSSE 60

Query: 61  GGEIEVIGLKKLEDAIHGIFVRRLAPDWLPLRPGSSYWVPPKRSSDNIIEIVERLTNPLT 120
            GEIEV+GLKKLEDAIH IFVRRLAPDWLP RPGSSYWVPPKR +DNI+E+VE+LTNPLT
Sbjct: 61  SGEIEVLGLKKLEDAIHSIFVRRLAPDWLPFRPGSSYWVPPKRPTDNIVELVEKLTNPLT 120

Query: 121 EEECLSLSSTRGWPSSSFFFEGSIR-HSTPVQVEVQVHDSSNLGKPSVSEDEE 171
           EEE LSLSS RGWPSSSFF  GSI  H  PV+VEVQVH  SN GKPS++EDEE
Sbjct: 121 EEESLSLSSARGWPSSSFFLGGSISDHVIPVEVEVQVHVQSNSGKPSLAEDEE 153

[Close]

BLAST of Spo02915.1 vs. NCBI nr
Match: gi|720055897|ref|XP_010273529.1| (PREDICTED: uncharacterized protein LOC104609040 [Nelumbo nucifera])

HSP 1 Score: 147.9 bits (372), Expect = 1.600e-32
Identity = 87/171 (50.88%), Postives = 112/171 (65.50%), Query Frame = 1

		  
Query: 1   MARRFSQYLTTTLSSSSVASTTLLKLLPSSLCSPFLSHP-RNHLSTKARLIEIDLESSDG 60
           MAR  SQ L  T S + ++S    KL P +  S  ++H  R++ S KA+LIE+DL+    
Sbjct: 1   MARIISQTLIRTSSPTFLSS----KLPPFAPSSRLVNHRNRSNRSEKAQLIEVDLDPES- 60

Query: 61  GEIEVIGLKKLEDAIHGIFVRRLAPDWLPLRPGSSYWVPPKRSSDNIIEIVERLTNPLTE 120
            E+EV+GL++LE+AIHGI VRR APDWLP  PGSSYWVPP++    I+E+V +L NPLTE
Sbjct: 61  -EVEVLGLRRLEEAIHGIIVRRSAPDWLPFIPGSSYWVPPRKRPYGIVELVGKLANPLTE 120

Query: 121 EECLSLSSTRGWPSSSFFFEGSIRHSTPVQVEVQVHDSSNLGKPSVSEDEE 171
           EE LSL S RGWPSSS+F EG   H + +         +N  K S SEDEE
Sbjct: 121 EEMLSLKSIRGWPSSSYFVEGGAPHPSEI--------DANSKKASQSEDEE 157

[Close]

BLAST of Spo02915.1 vs. NCBI nr
Match: gi|720012560|ref|XP_010259901.1| (PREDICTED: uncharacterized protein LOC104599177 [Nelumbo nucifera])

HSP 1 Score: 140.6 bits (353), Expect = 2.600e-30
Identity = 85/170 (50.00%), Postives = 108/170 (63.53%), Query Frame = 1

		  
Query: 1   MARRFSQYLTTTLSSSSVASTTLLKLLPSSLCSPFLSHPRNHLSTKARLIEIDLESSDGG 60
           MAR  SQ L   +SS S  S+      PSS      S        +A++IE+DL+S +  
Sbjct: 1   MARILSQTLIR-VSSPSFLSSQSPPFAPSSRLVNHRSRSNRSEKVQAQVIEVDLDSEN-- 60

Query: 61  EIEVIGLKKLEDAIHGIFVRRLAPDWLPLRPGSSYWVPPKRSSDNIIEIVERLTNPLTEE 120
           E+EV+G+++LEDAIHGI VRR APDWLP  PGSSYWVPP++    I+E+V RL NPLTEE
Sbjct: 61  EVEVLGMRRLEDAIHGIIVRRSAPDWLPFIPGSSYWVPPRKRPYGIVELVGRLANPLTEE 120

Query: 121 ECLSLSSTRGWPSSSFFFEGSIRHSTPVQVEVQVHDSSNLGKPSVSEDEE 171
           E LSL++ RGWPS S+F EG    + P  VE+     +N  K S SEDEE
Sbjct: 121 ETLSLTTVRGWPSFSYFVEG----AGPQHVEI----DANSMKSSQSEDEE 159

[Close]

BLAST of Spo02915.1 vs. NCBI nr
Match: gi|548854561|gb|ERN12471.1| (hypothetical protein AMTR_s00025p00162300 [Amborella trichopoda])

HSP 1 Score: 135.2 bits (339), Expect = 1.100e-28
Identity = 71/137 (51.82%), Postives = 92/137 (67.15%), Query Frame = 1

		  
Query: 39  PRNHLSTK-----ARLIEIDLESSDGGEIEVIGLKKLEDAIHGIFVRRLAPDWLPLRPGS 98
           PR++ S K     ++LIE+DLE  D  E+E++G KKLEDAIHGI VRR AP WLP  PGS
Sbjct: 5   PRSNSSRKEGLESSQLIEVDLEGGDA-EVEILGFKKLEDAIHGIIVRRSAPSWLPFLPGS 64

Query: 99  SYWVPPKRSSDNIIEIVERLTNPLTEEECLSLSSTRGWPSSSFFFEGSIRHSTPVQVEVQ 158
           SYWVPP++   +++E+V RL NP+TEEE +S ++ RGWPSSS+F E S  H  PV+    
Sbjct: 65  SYWVPPRKKQLSVVELVGRLANPMTEEETMSFTTARGWPSSSYFIEDSSPH--PVE---- 124

Query: 159 VHDSSNLGKPSVSEDEE 171
                N  K   SE+EE
Sbjct: 125 ----GNSKKTPHSEEEE 130

[Close]

BLAST of Spo02915.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RQI8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_040400 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 8.400e-89
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1

		  
Query: 1   MARRFSQYLTTTLSSSSVASTTLLKLLPSSLCSPFLSHPRNHLSTKARLIEIDLESSDGG 60
           MARRFSQYLTTTLSSSSVASTTLLKLLPSSLCSPFLSHPRNHLSTKARLIEIDLESSDGG
Sbjct: 1   MARRFSQYLTTTLSSSSVASTTLLKLLPSSLCSPFLSHPRNHLSTKARLIEIDLESSDGG 60

Query: 61  EIEVIGLKKLEDAIHGIFVRRLAPDWLPLRPGSSYWVPPKRSSDNIIEIVERLTNPLTEE 120
           EIEVIGLKKLEDAIHGIFVRRLAPDWLPLRPGSSYWVPPKRSSDNIIEIVERLTNPLTEE
Sbjct: 61  EIEVIGLKKLEDAIHGIFVRRLAPDWLPLRPGSSYWVPPKRSSDNIIEIVERLTNPLTEE 120

Query: 121 ECLSLSSTRGWPSSSFFFEGSIRHSTPVQVEVQVHDSSNLGKPSVSEDEE 171
           ECLSLSSTRGWPSSSFFFEGSIRHSTPVQVEVQVHDSSNLGKPSVSEDEE
Sbjct: 121 ECLSLSSTRGWPSSSFFFEGSIRHSTPVQVEVQVHDSSNLGKPSVSEDEE 170

[Close]

BLAST of Spo02915.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BPS4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g198000 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 8.500e-49
Identity = 113/173 (65.32%), Postives = 128/173 (73.99%), Query Frame = 1

		  
Query: 1   MARRFSQYLTTTLSSSSVASTTLLKLLPSSLCSPFLSHPRNHLSTKARLIEIDLESS--D 60
           MAR+ S+ LT+ L             LP SL S   S       +KARLIE+DL+SS  +
Sbjct: 1   MARQLSKTLTSNL-------------LPISLSSRVFS-------SKARLIEVDLDSSSSE 60

Query: 61  GGEIEVIGLKKLEDAIHGIFVRRLAPDWLPLRPGSSYWVPPKRSSDNIIEIVERLTNPLT 120
            GEIEV+GLKKLEDAIH IFVRRLAPDWLP RPGSSYWVPPKR +DNI+E+VE+LTNPLT
Sbjct: 61  SGEIEVLGLKKLEDAIHSIFVRRLAPDWLPFRPGSSYWVPPKRPTDNIVELVEKLTNPLT 120

Query: 121 EEECLSLSSTRGWPSSSFFFEGSIR-HSTPVQVEVQVHDSSNLGKPSVSEDEE 171
           EEE LSLSS RGWPSSSFF  GSI  H  PV+VEVQVH  SN GKPS++EDEE
Sbjct: 121 EEESLSLSSARGWPSSSFFLGGSISDHVIPVEVEVQVHVQSNSGKPSLAEDEE 153

[Close]

BLAST of Spo02915.1 vs. UniProtKB/TrEMBL
Match: W1PX98_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00025p00162300 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 7.500e-29
Identity = 71/137 (51.82%), Postives = 92/137 (67.15%), Query Frame = 1

		  
Query: 39  PRNHLSTK-----ARLIEIDLESSDGGEIEVIGLKKLEDAIHGIFVRRLAPDWLPLRPGS 98
           PR++ S K     ++LIE+DLE  D  E+E++G KKLEDAIHGI VRR AP WLP  PGS
Sbjct: 5   PRSNSSRKEGLESSQLIEVDLEGGDA-EVEILGFKKLEDAIHGIIVRRSAPSWLPFLPGS 64

Query: 99  SYWVPPKRSSDNIIEIVERLTNPLTEEECLSLSSTRGWPSSSFFFEGSIRHSTPVQVEVQ 158
           SYWVPP++   +++E+V RL NP+TEEE +S ++ RGWPSSS+F E S  H  PV+    
Sbjct: 65  SYWVPPRKKQLSVVELVGRLANPMTEEETMSFTTARGWPSSSYFIEDSSPH--PVE---- 124

Query: 159 VHDSSNLGKPSVSEDEE 171
                N  K   SE+EE
Sbjct: 125 ----GNSKKTPHSEEEE 130

[Close]

BLAST of Spo02915.1 vs. UniProtKB/TrEMBL
Match: A0A124SI81_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_009730 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 3.700e-28
Identity = 83/175 (47.43%), Postives = 115/175 (65.71%), Query Frame = 1

		  
Query: 1   MARRFSQYLTTTLSSSSVASTTLLKLLPSSLCSPFLSHPRNHLSTKARLIEIDLESSDGG 60
           MAR  S+ L  + SSSS+ S    KL  S        H  +  S KA+LIE++LES    
Sbjct: 1   MARFLSKTLIQSTSSSSLNSFETFKLGVSQ------PHRFSSRSGKAQLIEVELES---- 60

Query: 61  EIEVIGLKKLEDAIHGIFVRRLAPDWLPLRPGSSYWVPPKR---SSDNIIEIVERLTNPL 120
           E EV+G++KLED IH I VR+  PDWLP  PGSSYWVPP+R    S  I+E++E+LTNP+
Sbjct: 61  EGEVVGIRKLEDVIHNIIVRQSTPDWLPFIPGSSYWVPPRRHRPESHGIVEVLEKLTNPM 120

Query: 121 TEEECLSLSSTRGWPSSSFFFEGSIRHSTPVQ-VEVQVHDS-SNLGKPSVSEDEE 171
           TE+E +SL+++RGWPSSS+F EG    ++PV  VE + +++  N+ +P   +DEE
Sbjct: 121 TEDESMSLNTSRGWPSSSYFLEG----TSPVHPVEAKAYNNEENMSQP---KDEE 158

[Close]

BLAST of Spo02915.1 vs. UniProtKB/TrEMBL
Match: A0A103Y2Q5_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_020302 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 3.700e-28
Identity = 86/178 (48.31%), Postives = 112/178 (62.92%), Query Frame = 1

		  
Query: 1   MARRFSQYLTTTLSSSSVASTTLLKLLPSSLCSPFLSHPRNHLSTKARLIEIDLESSDGG 60
           MAR  SQ L  T SS+S +  T  KL  S      + H  +  S KA+LIE+DLES   G
Sbjct: 1   MARFLSQTLIRTTSSASNSLQTF-KLGIS------MEHRFSSQSGKAQLIEVDLESD--G 60

Query: 61  EIEVIGLKKLEDAIHGIFVRRLAPDWLPLRPGSSYWVPPKRSSD------NIIEIVERLT 120
           E+EV+GL+KLEDAIH I VR+ APDWLP  PGSSYWVPP+R         N++    R +
Sbjct: 61  EVEVLGLRKLEDAIHSIIVRQSAPDWLPFVPGSSYWVPPRRHRPDSLGMINVLRKFRRRS 120

Query: 121 NPLTEEECLSLSSTRGWPSSSFFFEGSIR-HSTPVQVEVQ-VHDSSNLGKPSVSEDEE 171
                EE +++SS+RGWPSS++FFEG+   H  PV+VE + VH + N+   S +EDEE
Sbjct: 121 RDAETEESMAVSSSRGWPSSAYFFEGTTTIHPLPVEVEAEVVHSNENM---SDAEDEE 166

[Close]

BLAST of Spo02915.1 vs. TAIR (Arabidopsis)
Match: AT1G16840.4 (unknown protein)

HSP 1 Score: 109.8 bits (273), Expect = 1.700e-24
Identity = 74/173 (42.77%), Postives = 100/173 (57.80%), Query Frame = 1

		  
Query: 1   MARRFSQYLTTTLSSSSVASTTLLKLLPSSLCSPFLSHPRNHLSTKARLIEIDLESSDGG 60
           MAR FS+ L+ +    + AS++LL   PSS    F S   +    +  L EID  ++   
Sbjct: 1   MARSFSRSLSLSKGRFAAASSSLL---PSSHLVSFRSQSSDR---RGDLYEIDTSAASQS 60

Query: 61  EIEVIGLKKLEDAIHGIFVRRLAPDWLPLRPGSSYWVPPKRS---SDNIIEIVERLTNPL 120
             + + ++KLEDA+H IFVRR  PDWLP  PG+SYWVPP  S   S  I ++V +L NPL
Sbjct: 61  PSDPL-IQKLEDAVHRIFVRRAQPDWLPFVPGASYWVPPPGSGSQSHGIAQLVVKLANPL 120

Query: 121 TEEECLSLSSTRGWPSSSFFFEGSIRHSTPVQVEVQVHDSSNLGKPSVSEDEE 171
           T EE LS +S+ GWPSS +F +G      P  +E +   +SN    S SEDEE
Sbjct: 121 THEESLSTNSSHGWPSSDYFLKG----VQPQLMETKTETTSN--SESHSEDEE 160

[Close]

BLAST of Spo02915.1 vs. TAIR (Arabidopsis)
Match: AT1G78890.1 (unknown protein)

HSP 1 Score: 100.5 bits (249), Expect = 1.000e-21
Identity = 75/174 (43.10%), Postives = 97/174 (55.75%), Query Frame = 1

		  
Query: 1   MARRFSQYLTTTLSSSSVASTTLLKLLPSSLCSPFLSHPRNHLSTKARL---IEIDLESS 60
           MAR  S  L+  LS    A+ +LL  LPSS      S   N  S    L    EID+ + 
Sbjct: 1   MARSLSPSLS--LSRYRFAAASLL--LPSSQTIFIRSQSSNRRSNSNHLGVIYEIDIAAD 60

Query: 61  DGGEIEVIGLKKLEDAIHGIFVRRLAPDWLPLRPGSSYWVPPKRS-SDNIIEIVERLTNP 120
                    + KLEDA+H I VRR APDWLP  PG+S+WVPP RS S  I ++VE+L NP
Sbjct: 61  PL-------VNKLEDAVHRIMVRRSAPDWLPFVPGASFWVPPPRSQSHGIAKLVEKLANP 120

Query: 121 LTEEECLSLSSTRGWPSSSFFFEGSIRHSTPVQVEVQVHDSSNLGKPSVSEDEE 171
           +++EE +S+SS RGWP S +F +G      P  VE ++  +SN      SEDEE
Sbjct: 121 ISDEESISISSVRGWPCSDYFIKG----VKPQSVETEM--TSNTAYH--SEDEE 155

[Close]

BLAST of Spo02915.1 vs. TAIR (Arabidopsis)
Match: AT2G19180.1 (unknown protein)

HSP 1 Score: 94.0 bits (232), Expect = 9.700e-20
Identity = 57/149 (38.26%), Postives = 83/149 (55.70%), Query Frame = 1

		  
Query: 16  SSVASTTLL---KLLPSSLCSPFLSHPRN------HLSTKARLIEIDLESSDGGEIEVIG 75
           S + S TL+   + L      P ++ P N        S+  ++IE++++S +  E  +  
Sbjct: 2   SRLLSKTLIPNGRFLLRRFNEPAITTPPNVVCFSRRFSSIPQVIELEIDSKNEAEAAI-- 61

Query: 76  LKKLEDAIHGIFVRRLAPDWLPLRPGSSYWVPPKR-SSDNIIEIVERLTNPLTEEECLSL 135
           LKKL + +  I V    PDWLP  PGSS+WVPP + ++  I  +V+++TNPLTEEE LSL
Sbjct: 62  LKKLNEFVRRIIVHNSTPDWLPFAPGSSFWVPPHQITATKIANLVDKVTNPLTEEESLSL 121

Query: 136 SSTRGWPSSSFFFEGSIRHSTPVQVEVQV 155
           SS  GWP SSFF       S+  + E  V
Sbjct: 122 SSPYGWPCSSFFIPPPDGSSSTQEEEASV 148

The following BLAST results are available for this feature:

BLAST of Spo02915.1 vs. NCBI nr
BLAST of Spo02915.1 vs. UniProtKB/TrEMBL
BLAST of Spo02915.1 vs. ExPASy Swiss-Prot
BLAST of Spo02915.1 vs. TAIR (Arabidopsis)

BLAST of Spo02915.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|902230167\|gb\|KNA21743.1\|	1.2e-88	100.	hypothetical protein SOVF_0404...	[more]
gi\|731354110\|ref\|XP_010688408.1\|	1.2e-48	65.3	PREDICTED: uncharacterized pro...	[more]
gi\|720055897\|ref\|XP_010273529.1\|	1.6e-32	50.8	PREDICTED: uncharacterized pro...	[more]
gi\|720012560\|ref\|XP_010259901.1\|	2.6e-30	50.0	PREDICTED: uncharacterized pro...	[more]
gi\|548854561\|gb\|ERN12471.1\|	1.1e-28	51.8	hypothetical protein AMTR_s000...	[more]

BLAST of Spo02915.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0K9RQI8_SPIOL	8.4e-89	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BPS4_BETVU	8.5e-49	65.3	Uncharacterized protein OS=Bet...	[more]
W1PX98_AMBTC	7.5e-29	51.8	Uncharacterized protein OS=Amb...	[more]
A0A124SI81_CYNCS	3.7e-28	47.4	Uncharacterized protein OS=Cyn...	[more]
A0A103Y2Q5_CYNCS	3.7e-28	48.3	Uncharacterized protein OS=Cyn...	[more]

BLAST of Spo02915.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

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x 1


Match Name	E-value	Identity	Description

BLAST of Spo02915.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3

Position :

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x 1


Match Name	E-value	Identity	Description
AT1G16840.4	1.7e-24	42.7	unknown protein	[more]
AT1G78890.1	1.0e-21	43.1	unknown protein	[more]
AT2G19180.1	9.7e-20	38.2	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33972	FAMILY NOT NAMED	coord: 2..169 score: 2.0
None	No IPR available	PANTHER	PTHR33972:SF2	EXPRESSED PROTEIN	coord: 2..169 score: 2.0

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042967	obsolete acyl-carrier-protein biosynthetic process
biological_process	GO:0009664	plant-type cell wall organization
biological_process	GO:0046777	protein autophosphorylation
biological_process	GO:0071555	cell wall organization
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process	GO:0080129	proteasome core complex assembly
biological_process	GO:0000271	polysaccharide biosynthetic process
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
biological_process	GO:0009832	plant-type cell wall biogenesis
biological_process	GO:0016311	dephosphorylation
biological_process	GO:0043090	amino acid import
biological_process	GO:0043481	anthocyanin accumulation in tissues in response to UV light
biological_process	GO:0009785	blue light signaling pathway
biological_process	GO:0009932	cell tip growth
biological_process	GO:0007010	cytoskeleton organization
biological_process	GO:0006888	ER to Golgi vesicle-mediated transport
biological_process	GO:0006635	fatty acid beta-oxidation
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0009825	multidimensional cell growth
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0010817	regulation of hormone levels
biological_process	GO:0009638	phototropism
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0007623	circadian rhythm
biological_process	GO:0009909	regulation of flower development
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009407	toxin catabolic process
biological_process	GO:0048767	root hair elongation
biological_process	GO:0010155	regulation of proton transport
biological_process	GO:0051788	response to misfolded protein
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0000373	Group II intron splicing
biological_process	GO:0006397	mRNA processing
biological_process	GO:0000956	nuclear-transcribed mRNA catabolic process
biological_process	GO:0097031	obsolete mitochondrial respiratory chain complex I biogenesis
biological_process	GO:0097034	obsolete mitochondrial respiratory chain complex IV biogenesis
biological_process	GO:0048573	photoperiodism, flowering
biological_process	GO:0010048	vernalization response
biological_process	GO:0009735	response to cytokinin
biological_process	GO:0009853	photorespiration
cellular_component	GO:0005618	cell wall
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0008540	proteasome regulatory particle, base subcomplex
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005576	extracellular region
cellular_component	GO:1990904	ribonucleoprotein complex
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0000785	chromatin
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0004871	obsolete signal transducer activity
molecular_function	GO:0008568	microtubule-severing ATPase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008080	N-acetyltransferase activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0016706	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008253	5'-nucleotidase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016829	lyase activity
molecular_function	GO:0004650	polygalacturonase activity
molecular_function	GO:0008270	zinc ion binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo21802	0.79	Barchart \| Table
Spo18386	0.78	Barchart \| Table
Spo26850	0.76	Barchart \| Table
Spo01421	0.76	Barchart \| Table
Spo13479	0.76	Barchart \| Table
Spo00124	0.75	Barchart \| Table
Spo07928	0.75	Barchart \| Table
Spo12742	0.74	Barchart \| Table
Spo07610	0.74	Barchart \| Table
Spo06829	0.74	Barchart \| Table
Spo22006	0.74	Barchart \| Table
Spo00358	0.73	Barchart \| Table
Spo00222	0.73	Barchart \| Table
Spo25593	0.73	Barchart \| Table
Spo16806	0.73	Barchart \| Table
Spo15537	0.73	Barchart \| Table
Spo23690	0.72	Barchart \| Table
Spo21332	0.72	Barchart \| Table
Spo10752	0.72	Barchart \| Table
Spo24440	0.72	Barchart \| Table
Spo17628	0.72	Barchart \| Table
Spo22732	0.71	Barchart \| Table
Spo16661	0.71	Barchart \| Table
Spo06185	0.70	Barchart \| Table
Spo01305	0.70	Barchart \| Table
Spo18746	0.70	Barchart \| Table
Spo03858	0.70	Barchart \| Table
Spo16817	0.70	Barchart \| Table
Spo21376	0.70	Barchart \| Table
Spo16321	0.70	Barchart \| Table
Spo26851	0.69	Barchart \| Table
Spo25351	0.69	Barchart \| Table
Spo06614	0.69	Barchart \| Table
Spo21542	0.69	Barchart \| Table
Spo08221	0.69	Barchart \| Table
Spo08254	0.69	Barchart \| Table
Spo25099	0.69	Barchart \| Table
Spo20612	0.69	Barchart \| Table
Spo25873	0.69	Barchart \| Table
Spo16209	0.69	Barchart \| Table
Spo01384	0.69	Barchart \| Table
Spo25433	0.69	Barchart \| Table
Spo10586	0.68	Barchart \| Table
Spo14523	0.68	Barchart \| Table
Spo09093	0.68	Barchart \| Table
Spo03903	0.68	Barchart \| Table
Spo26661	0.68	Barchart \| Table
Spo04377	0.68	Barchart \| Table
Spo06061	0.68	Barchart \| Table
Spo00400	0.68	Barchart \| Table
Spo05751	0.68	Barchart \| Table
Spo24502	0.68	Barchart \| Table
Spo19196	0.68	Barchart \| Table
Spo20387	0.68	Barchart \| Table
Spo01442	0.68	Barchart \| Table
Spo01868	0.68	Barchart \| Table
Spo19195	0.67	Barchart \| Table
Spo02773	0.67	Barchart \| Table
Spo04698	0.67	Barchart \| Table
Spo05134	0.67	Barchart \| Table
Spo05230	0.67	Barchart \| Table
Spo05311	0.67	Barchart \| Table
Spo14697	0.67	Barchart \| Table
Spo16568	0.67	Barchart \| Table
Spo16839	0.67	Barchart \| Table
Spo18907	0.67	Barchart \| Table
Spo18942	0.67	Barchart \| Table
Spo19474	0.67	Barchart \| Table
Spo19863	0.67	Barchart \| Table
Spo21289	0.67	Barchart \| Table
Spo21811	0.67	Barchart \| Table
Spo22364	0.67	Barchart \| Table
Spo23235	0.67	Barchart \| Table
Spo23906	0.67	Barchart \| Table
Spo24388	0.67	Barchart \| Table
Spo26302	0.67	Barchart \| Table
Spo26857	0.67	Barchart \| Table
Spo02460	0.66	Barchart \| Table
Spo21996	0.66	Barchart \| Table
Spo15850	0.66	Barchart \| Table
Spo27210	0.66	Barchart \| Table
Spo13780	0.66	Barchart \| Table
Spo13491	0.66	Barchart \| Table
Spo11520	0.66	Barchart \| Table
Spo24533	0.66	Barchart \| Table
Spo11348	0.66	Barchart \| Table
Spo13760	0.66	Barchart \| Table
Spo00750	0.66	Barchart \| Table
Spo04147	0.66	Barchart \| Table
Spo00413	0.66	Barchart \| Table
Spo18986	0.66	Barchart \| Table
Spo22712	0.65	Barchart \| Table
Spo02432	0.65	Barchart \| Table
Spo05969	0.65	Barchart \| Table
Spo04989	0.65	Barchart \| Table
Spo20966	0.65	Barchart \| Table