Spo02998 (gene)

Overview
NameSpo02998
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionPseudouridine synthase family protein
Locationchr1 : 30450605 .. 30462649 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCGTACTCCGTACTCGTTATTTCTCCTGTTTGTGTTGGGCGGTATGAAGACCATCGGAATACCATGGCCTGAATTCAACGATGGTCTTAGATACAACGACGTCGTTTCACCCTCAAATTCAGGTGTCTCTTTGATCCAGTTCTACTCCTCCAACCACCCTAGCTCAGCTCCATTGCAGGGGTAATTCTTTATCACACTTTATTTTCAATTTATTCGAGTACAAACATAATTATTGAATAAATGGAAAGGGTTTTTAATTTTATTTTTTTGAATTTTTCAGTTTTTGTTTTGTTTTGATTTCTGATTGTTTCATGTTGTTTTTTTCTGGTTTAATCAGTTGGTTACAGAGAATTCATAATGGTCAGATTACAATTGATGGTGATACTGTTACTGATCCAAACATTGTTCTTCGGTAAGTAGTGACGTCTTTTACTATTTCTGGGCGTATAGTGAGCTATGAAGGGCAATGATATAGACGTGATTTGATACTGTGTGTTGGGTAGAAGTTATCGCCAAGATACCAACTAAGATAATTAGAATCAATAGTTTAGAGCTTACTTTAATATACTCCCCTTGGTGCATACATTTTTTTTTTCACTTGAGTAATTGGTTTGGTCACAAAAACTAAATTAAGAATGCTTCTTCATAGCCAAAATCAAACCTGGAAATCATATTAAGAAAATGGTTGTTAAAATTGAAATTGGATGAGCAGAGAAATCGAAGGGAAAGTGTTGGGAGGGAGGGAGGGAGGGAGGGAGGGAAAGAGAGAATATGGAATGGTAAATAGTTGAATTATATACTTTAACTCGTAAACAAAGTGTGAGGATTTAATATGGGCCATGGCAAATTTCTATTGTGCAGTTTGGATGATGGAAGTGTAAAAACTTTTTCTTTTTTGCTTATATATATATATTTTTTTAGAAGTTATTGTATTCTTGTTCCTTTTTTGTTTAATGGGTGTTTCATACTTTCATGGTATAGAGTTGGTTCGAAGTTGGTGTATCATCGACTTCCATGGAGTGAGCCTGAGACGCCTTTCTTGCTTGAAGTGCTCTATGAGGATGATGACATGGTATAACATCCTAATGGTGATTGTTGTGATGCTATGTTTTCTAAATTACATTTGGTTTTCCATGTTTTGTTTGTATTTCTTTGTAGTTTTATTGATGTCTTGTGCTATGAAATTACTTTGGCGGGTAGGATTAAACGTTTTATAAACGTTATATGTTTCTTTTGGGGGCATCATGTGCATGGTACTCCATATATAAATAAAAAAAATTATTTTGTAGTAAACTTGACCTTGTCAATATTGAATAATGTATCCATTATGATTATATATATAGCATGAACATTTTATGGATACCCTCAATCATATTCATATTGAAACTAGAGCATATTCAATTGGAGCCCCATGCCGTCATGCTCATAGTGCTCCATGGTGTAGGATATTATTTGCGGAATATTATGCTTGTTGTTTTGCATATTAGAGTAATTGTTCGACCTCAAGAGTTGGAGGTTAAACCTTTGAATGGTGTTGGGTCTACTTCTTAAGGCTGGGTAAATATAACTCTTTGGAAGTGACTAGTGGGAATTTGAAATTTTTACTGTTACGGCAATCCATATGGAATAGCATGCAAGGGGCAGACAATTATAATCAGGTCATATCCTTGATTAGTTTTTGTAATTAGATTGTTTGTCAAATAGATGAGAGATGATGATGAAACCTCGCTGCCAGTATAGCCATTTTTCTATTAAGATTCCTATGCATCCAGATTCTAAGCTATCCAGTTGATTTTAGTAAATTTTACTGGATCTTGACTTGTTTTTATCTTTACATGACAGATTGTTCTAAATAAGCCATCTGGATTGCAAGTTCTTCCTGGAGGACTCTTCCAGCAGCGCACTGTTTTGACACAATTGAAGTGGCATGTGAACAAGAATGAGAATTCAACACCAAGTCAACTTCATCCTGTTCCTGTTCACCGTCTAGGCAGAGGCACTTCAGGTTAGCCTTCTTGTTGTATATAGAAATGGAAAGATATTAGGTTCACACTTATGGAAAGTTTCAAGCCTGCTAGTAACTTATAACTCAAATATATATCTAAGAATGGAGTGTGTGCCGTCATCACCTCCTACAGCCCCCAAATAACCATCATGCAATGCAGATGCTCTAATGCAATATTCCGCTTTTGTGGTTTGCAGAACTAAACATCCAGTTATTGGTTGTGATTTGTGGAATCTTACCCATCCACTTCTACTGAGTGATAATCATGTACTCAGCCTTAGTAATGGGAGTAAAATTAAGCTTTGAATTGAGAAAAGAGGCTAAGTATTGATGGTTTGTGATTGTACTTCTGTACTAAAACATGGTATTTTTAAAACAAGATGAATGCTCTCTCTCGCTTTGTTTTCCCTTTAAACTCTCCCTTCTGCTTTCTCTTTTTTTTCCTCCTCGTCTCGCTTCTTCAATAGTGGGAGTGACATGGGACTAGTGCTTCCCTCTTTATAGATCAAAGGGTACCATTAAAAAATATAAAAAATGGATGGTTTATCAAGTTTTAGGGAAAAGGCTAGAATAAATCTTGGTTGATGGTGGTGTTAGTGTGTCACGGTGGTGTCAATGTTTTGACACCGGATCCATGCGGCACGCTCTTTCTTTTTTCGCGGCAAGGACGCAGCCTTGTGCGGAATGAGTGTCTCGGGGCTCGTAGAGGCACGAGCAAGCATTTGGTCAGAACGGGCACTCTTGCTTTTTGGCGACAAGAGCGAGGGTCGATCGGGGCGCTTGTGTGAACAGAACAAGCACAAGCGTGACCGACGACGAGAATTAATTTGCTTGCGGGACTTTGGGGTGCTTTAGAGCGAGTGGCGACATAATATCTATAAAGGCCTACAACAAAACGCAAACAATAAAGCAATTGCAACAATTGGTGAAAAGTAGGAATTCATTCATTCATACCCTTCATAGAGGTTTATTTTGAATTAGCTACAAACTACCTGTGAGCATTGGATTGAACTGGATTGACAGTAACATAATAATTCTATCTAAAGCCTAGAAACCTATTAGAAAAGTCCTAGAAAGCATTAAATAAGCAAAATACAAGTAAAGGAAGGTTGGATTCTAACAAAGTGGGTAGTGTTTGAAGGATATATAGTTCTCTTCAGTAGATTTTGACCTGGTACATAGATCTGAAAAGACGAAGAGGTTTGGATGGGTTTTGTATTGGTCAAAACTGAAAACCTGATCTAATTTAAAACGAAGATTCCTCAACTTGCACTAGCATGCTGGAGTTGTCCGCTGCTTTTTTTATCTATTTCAGGGAGGCAAACAAGTGATCCCTGATTAGATTTGTTGGCAGCTCTGCAATGGGTTGTGGAGCAGTGGTAGATTGCGAAAGATTTTTTTGGTTCAGTTCCTATTAGATCTTGGTATGAGAATCCAGGATCAGGTTATGTGTTGTTTACAATGAGGCGTTAGGTCTTTGCTGGAAACTAATCAGCAGCAACAATGTTGCTAGTGATGGTTGGGACTTGGGAGCAGAGGTAGATTGCAAAGATCAAGGGCGAGCAGACACGCAGGAGGTAGATAAAACGGATATTTACAGGGATAGATGGGTGGCATTGTGAATTGGCACGTAGGTGGTGTTTGAGATTATTATTTATTTGCATGCTTATTGATGTCCTAACACAGGTGAGTCACATGATGCAGCGGTTATTAGCAGCAAATTGAAAAAACACCAAATCTTTTTGATGGGATGGAAGTAAAGCTGGGTGATACTAGGGGAAGCCGTAGTCAAACTTTTACAAGGAAGAATAATTGGAATTTAGAAAGAGAGGAAATCAGGCCATGGTCAAGAAAGGTTTCTTTCTATAGGATTAGTGAATTTCTTAGGATTTTTCCTTGCCTCCTCTTCTTAGGGCTGTTTGTTCTGTTGCTGTATTATTCTCTTTCTATTCTAATGGAATCGTTTCAGCCTGAACTGTAAAAACACCTCAACGTTAAAAGAATGTAAAATAAGGAAGGCTGACTGGAAGCTATGTGGCTATCCAATTTTTCCCAATTTGAACCTGACGGATAATTAGATGCATTGGCACTTAAGCCTAGTATGCAAATGGCTGATGTGTTGAAAATTTTGAGTCTGTTGGTGGGGGCTTCTTGTGTGATGTAAAAAAGTTGCTAGGTGTAAAAATTTCTGAACTTTCATCCAAACCCTCCCCCCCTCAACGCCTTCATGATGTTCACTTATGCCAAGTGATTCAATTGCTTATGGGAGTACCAAATTGCAATGAATCCCCAAAATCTGAATATCTGATTCATTCAACTTCCAACTCGCTAATTAAGTGTAATAAAAGATTACGTCAATTATGAACAAACTTACTCAAAAGAACTATAACATTCACATGCATAAGTGCATAACCCATATAGTTGTTGCCAAACATGTGCATAAAAAATTATCTCTCCCTGTTGGGTTACTTAAACATATTGGTGGGGGGAGTGTGCTATAGTTCTGTGAGATCCGTCTTCAGTTTATACTTTGAAGAAATGGAAACTGTTAATTCTATTAAAGATATCTAGGATTACTGTCCAAAGAAAGGAAATTTGTGCTTCATTAATGTTCAGACAGTTGCAGGAGTTGAAAAGTTTGCTGATGTGTACGTGCGCTACTTAGTGTAATAATGAGATAGGGTCAGATGATTTTGTAATCAGGTGAATTGTCTGGTGAGCAGCTTTGGGTAGAATCAGTTAAGTGTCAGATTACAAATCTGAACTTACGAAGTTGAAAAGGAGGAATCTCGTAGTTTGTGTGTGTGGGTGGGTGTGTGTGTGGGTGGGTGTGTGTGTGCCTGAGGAATGAAGAATATAGGGTAATAGGGATCACCTCTTTGGCCTTATATAGGAGATTAGTGGTTTACCGGTGATGGTGTAAACAATTCATGGTGCAAGAAGTAAGTGGTATGAGGAAGATTGCTCCTTGACTTTAATGTCCCAAATATATGAGAAGTGAGAACAAGTATATTTGATTGTTCCTCACAAAAATGCTAAAGATTAGAATTATATTCTTTTACAGACGTGAACAAAACGACTTTTTTGCAATGCAAATTCCAAATCTTTAGAGAGTATTTACCTCTGCAGTGTGCTATTTTTTTTACTTCAGTGTACTCGTAATGGAAGATTCTTTTCTTGGTCGGTGAAAGTTATTATTTAGAATTTCTTGACAGTTTCTATCATATGGTAATCTGTTCAATGGCATTTAGGTGTATTGCTTTCTGCGAAGACGAAGAGTGCAAAGGCTCGCCTTGCAGCATATTTTGCTGATGGGACGTCATTGGTGAGAGGAAAAAGGCTAGTAAAAGTGACTGCTTTTATAGTATTATGTCCATAATTTCTGTAAGCTTGTCGTTGCTTATGAATTCCTCCATCCCAAAAGAAATCTACGCTTGGGTACTTGTGAACATAAGTTTTTGAGTGGTACGGTGGAAGTAAAGAAGGTGAAGAAATTAAAGAAGACACTGGGTGAACTCTCTCGCGGAGGACAGAGCATCAATACTAAATCCTGGGCTTTTTCTGTCTTGAGATTGATGGTACCTCCTTTTCATTTTCATTTTTCTTCAAAGAGTTCAAACTAATATTCAGAACATCCTCTATAGGAGTGTTTTTTAGGGGGCCCTGTCATATTCTGAATGTAATTAGTAGGGAAATTCAGAGATAAGACGCTAATTGAACTATTGAATTGTTGAAAGGAACCTATCTGCTCATGTCATTAGAGCACCCTTGACAATGAGCCTGAAAGGGTTGACAAAATCCTTGAACCCTTTTAAAACTTAGGAGTTAGGGCTTGAATTTTTTTTCCTCTTAAACAGATTTTCATCTGCTCACTCCATGAAAGGAAAATACCTTCTTACTCCACCACCCTAACCTCTCTGCCTCATAACGAGCTTGATGACATACTTCCACAATAATTTCTCTTCATTTGTAAACCTCCCGTTGTCGTTCCGTTATCGCTTTTGGGTCAATTGGAAACAACCTCTCTGCAATTGCAGGGGTAAGGTTGCGTACACCCGACCCCCCCTTACCCCGCTTCTTGCGAGAGCCTCTTTGAGGCAATGTGGTAATGATAATGAATGTAAACCTCCATAGGCACTTTACCTTGGTAGTGTGTTCTTGGTATGGAGAATCCTAATACGAAGATATTGATCATGCTTGAGGTGACACGTCTACCCAATAGTCCAATAAAGTCCTTATCAGATTCATTTTAGCCCATAGGAAGTCTCGTTCTATTTCTTCAGCTTTCAAGTGACACTAGCTGAGCTGGTTAAACATAGACATAAATTAATAAGCAAAATGGAAAATGTGTTTTTATCAAAATCAATCTAGCCCTCTTGAAAAAAAATTGATTTGTACCCACCACCCAACAAGTTTTTTGAAACTCCCAATAATCAGAATCCAATCAAATTTGCCCCTTCACCTCAAGTTGTTAAAGACAACATAGTAGAGTAGTAGCCACAAGCCGTTCTTCATAAACCTGTGGAGCGGAATAATGGAGCATCCAGTGGGAAGACCCAAAAAAGGAATATGGAAGAAACTCCATGCAAGACAAGCAACCAGCTAAAATTTGCAAAGTCGGTACCTTCCCAACTGGATAAAACACACTTTTCTGTGAAATAACCATCAAGCCCAATATTGCTTCAGAAATTGAGCACATTCCAGATTTGTATAAAGATTGCAGTATCAACGGTGAGGAGAAGATGAGTGATGATGAGTTGTGAGAGAGATTATTTTTATGACATGATTCCAAAAGGCCTGTCTCAGTAGGCTTAGTCACCAGCTTATTCTATGAGACTGTCACAAGATAACAAGAGAAAAAAGAGGATCATGTTGGTGTAACGTAACCCTTGTGAGCTTTATATAAAAAAAATACTGGAAGCTCATTGATCAACACCCAGTAAATGAGTAAAATTACACAATACACCTACCTCCTCTTGTTAGGTAAACCCATTCTTTCAAGATTAATCATCAAAAAGTCCCATTAATAAGGCTATCGTGTACAATGAACTACAACAAACTACATTCAAAAACATTATCATATACCATTTCTAAGGCTATCTTGTACAATGAACTACATTCAAAAACATTATCATATACCATTTCTAAGGCTATCTTGTACAATGAACTACATGAACTTCAGCTAGGGTTGACATCCCCTTGGTGTCCCTTTTAAAATTTTAATACAATTACCCTAAACTCCTAAAGAAAACAGATGTACTTCAGACGTTATGGTTCTTTCATTTAATTTTATAAGAAGTTAAATACAAGTATGTTCTTTTCTCTTTTCCTTTTTATACGAAGTTTTGTTCTTATTCTGGCATCTTTTGACATTTGGTTTTTGATTAGAAGCTAACATTTCTCAATTACTAAACTGTTCAATATTACATATGATGTATGCAGAGAGACAGACTCGGAGATTGGAGAGGAACGAAGGATAACCAAAATATATCGTGCACTAGTCAAGGGGATTATAGACACAAATGAGGTATTTCCGGAAAAAAGGAGATATTTTATAAGCCCGATCTGTTAATTTTTTTATCTCAGATCCACTACCTAAAAAATAAAACATCTTCCCGCCAACTTTTTCTTGGGAGTTAATTAAATGGTATACGATAAGCTGGTAACCATTATTGGTATACATATTTTTTCCCTTTGGGAATAAAATTATTGACAGGTTCTGATCAACAAGCCAATTGGAATTATGCGATATCCTGGGGTTGCTAAGGGTCTATATGTTGCACTGCCCTCAGGTTATTTTCTATCTATATTCAATGCTTATGTTTCCTATTTCATTATAGCACTCCAAAAGCAATATGCAAGGGTACTATGATGGTTTTTGCATGTGTTGGTTCATACGAAGTATCATAATAATAAAGTTTGCAACCTTGAAGCTTATCTCTAGTAAGATAGAGATGTAATGAACTAAATAATAGAAGGGCATATAGGTAGTGAATGATATTTAGGTAGAAGACAAATTAGGTAGGTAGTAAAATGGTTATAATACTAGCACATTAGGTTATGGGAGGGATGTTGAGAATTTGGTAAAGCTTAGGCTTTGGAGAGTGGTGAGCTCAAGTCACTAAATCTGGAGATTGGTGGCCTCAAGTCACTACTTTTGTATTCCCTTTTTGTGTTCATCATCTATCAAGCAACTTGTTATATTTTCTGCCATTACTTTTATGCTCAAGAATATCAGTTCTTTACAAGAGGTCCCCAATGTGATTCACTACTTGCACATTCTCTATATTGGTTTTTCATGCTGGGGCTTCAATTAGATGAATAGCCTGTAGCTGTAGCCATCAAGCATTGACTGGAGGAGTAGAACATATCTTATCGTTTCCACAGTTCCAATTCGCTTATAGTCTTGGTCTCTTCAAATGGGAAATTTTATTTCTATCACAATATGGAGCACTTCCCTAATTTCTCTCTTACTTTGTTATATAGCCAAATGGATTGAAGACATTCTAGCCTAGACCTTGGACTCTAGTTACATGTCTAATTCAAGACCGGTGGCAACTATTGATTTGAAAATGGTCTATTGTAGCTTCTCATTTCATCTAGCTACCTTTATGTGTACGCATATAATGCACATTAAAATTGTTGGCTGTTTAAATCTAATCAAAGCAATTACCATTGGTTCATTTAGTGTGTAGTTTATTCCGTATCAAATCTTTAATCCATACATGTGTTGCAACAAATAATTGACCATTTATCTTATGATAAATAAAAGGCCTCTCTGTATGGATTACATTATTTAATTTTATCTCCATATAGTCCTTAGTGATTGAGTAGTGGATCCGAACTATTATGTGACTCTTTATCTGTGCATTTCACAATTAATTATAGACAGTACTATGCTCATGTCCAACATATTTACAATATTCTGAAATGGTGAAACACTTCAACATAGTATAGTTCATGTTCCTCCATGCACCCTCTTAAGGTGGTTCTGCTCCATGCGCTCAGCCCATAGTTGATGTCATTGAGACCAATTTGACCTTTAATAAACTAGTCGAAGGCTGAGGCCAAGCTTCCAATTTAATTAATTGCATGTACCAGCCCTGGAGTATAAACAATTTCCAATATTGTCTCGTAATAAAATCTTTACAAATGTTGGATTAAGTTGAACTTTAGAAGATCTCTGACTGGTGCATGACTGCAACTTTTAATTTTACGGGCATGTTATGTTCTAGTATACTACTCCCTCATTTCCATTTTACATACTATGGTTTCAATTTCTGGACATCCCAAATTATATGAAATATTAGAAATAACTTAAGGTATAGTTTCCTATTTTGAAAAGTGTGCTTTTTGCGTCAACGTGATATTTCTTTGAATTACTAAAGGATATTTTTGAAAGCAAGTTAGTCTGCAAAATAACTCCCGGAATATTTGTGAAATTTTGAATTTTGTATTATTAAAATAGAATAGGATGGAAGGAGTTGTAGTTTCTGATTCGAACAAGAGATGTTCTAATTTAATCAATCTAATGAGCAGCTTTAAGATACGGTTATTTTATTATGTAATACTGCCTTCTGTTCTTTTTATAGTTTCAATTACTGTAACCTAATATATTTAGGTGAGCATGATAAAAGGTCTGTGAATAGTGTGGTTTGTGTAAGAAAAAGAAGGAAAAATAAAGTTGTATGCAGGTTTGTGTAAGAATAAGTAGGAAGGAGTGTTGCATGGGGAAGGTGGGAAAAAACTGCCAAAACAGGAATAAAGTAGAACTGTAGAAGTGTGACAAACAAAAAGGAATTGGTGTAAATAGAAAGTGTACTTGATGTGCATGAGAAGAAGAGACAGAGAAAGAGTAAGAAGTTCCATGTAGGACTACTAGATTTTGTTTATTTGTTTGTTTGTTTTTTGGTTATATTTTTTGGTTTTTTTTTTGGTTTTTCCATCTTTGTTTAACCTCAATTTTCTGTGTATAGGTAAACCAGCCTTGAGCAAAGTCAGGGTTCTTGAAAGAGACATGGAGAAAAACCAAACACTGGTTCAGGTACTATGTTCTCCACATATTTCTCCTGTGACCTTCCTTTACATCTGAAAAAATTAAATAATCAAATATAATTGGTTTTCTAGAATTCTTGTTCTATATTCTTTAAACCACTTCCAAAGCTGGAAAGCTACTTTGGTAAGAAGTCCTTTGTATTGATGCTTCACAAATATCATAGAAGCTTCCACGCTGAATCTAAACATGTCTAAACCTGAATCCCTGGAAGTTATGGTTTGAGATTGATTTGGAGGTCTAAGACTGTTAGGGTGATGCCAATTTATTGTCCCAACTTCTTAATTAGAATCGCCATACTTTGAAAAGCTGAAGAGATAGGTCAGTGGTGCTGTGGTGGTCTTGTACATTTGTAGGCTTGATTGAAAAATCTTCTTGGTCAGGAAGTACCTTTCCTGTTGGCAAGACACAAAACCTTATAAGTAAAGGGTTTACGTAGTGGATCCTGATTGTTTGGAGTCGATAATAACTTTTTATTGTTTACATAATGGGAAATGGTTTTGTTTTGCTTAGGGCCTTGTGGCTTTCAATGAAAGTATGGAGCTATGCCCGCAGTCGAGAGACAATCACATCAACGTGCCAAGTCCTGTTATTTTGTAACAAATAACTCGAAAGCAAACAGAGAGACCTATAATAGACCATTATACAGAAAGCTAAAAACTGCAAACCTGACTTAATCGTTGATGAAAATCGACGGTGTAGAAAGTTTTTCCATCAGAGTTCTCTTTGCTCCTTTCAATTTTTGCAGAGAGAAGCTTTCACTGTTCTCACAGCTAGCTTCCTGAAACAGGTCCAGATACAGTCAGGAAGGCCTCACCAAATCCGTATTCATCTATCCCTAATTGGGTATCCACTCTTAGGTAAATTTTTGGTGTTATCTCCAAGATGTTTATATTTGATCGACCTTTTCTCGTTACGATTTTTTTTTTCTTCTGTGAGTTTTTCGACACTAGTTTTGGCTGGTCATGGGCAAAGCTGATTCAATTTGGACTTCCCCAAACCTTGCTACTTGTACCAAACTGTTACTGTTGTCTAGAACAGAAACTTCACTGTAACTGATTTTTCGGTCGTTCAAGAATTGCTTCTAAACGTAGCTGAAATGCCCATTTAGTTTTTCTTTCTTGTGGCCCGTCACAAAAATATTTCAGGAACTGTTAATGAAACATGATAATGTACCTGCTTGGAGAGTAATGGTTATCGGACTTCTGCATTTCACATTTCAGGTGATCCTCTTTATGTTGCTGGTGGTCAGCCAGAGTGTTTTGATTCAGAGCTCGTTGAAGAGGAATTTGCGGAAGATGGGTATTGAAACTCTGGATCTCTTCTTAAACTTTCTCGTGGTTTTATCTGTTGACCAAAACATGCAAGCCAGCCTATGAGGAAAACTACAGATGATTCCTATTCAAAGTTCTAATTCTAGCTCTGTGCAAACTACAGCCTATAGATGGGTTTTTTTTAAAAATCATAAACGAAATATATATTGGCATCTGTCAATTTATTTATCTTGAATGAATTTTACTTTATGCAGAGGGTATCAACGGCCTACAAAACCTGTTCCTGGAGACTGTGGGTATCATTTGCACGCACATGAAGTGACTCTATCCCATCCTACTACAAATGCGGTAATTGCAACATGAATTTGATTTGTGTTCATTCTCAACTTAAATTACATAGCTTGGCTATTAGAGAGTAATACTGATGAAGCATATGAGAATCATCATTTTATTTTTTATATTATTGCAGGTGATGAAGATAATTGCACCACTGCCTCCTATGCTGAAGTTGGATCAAGAGGCTAATTGAGGAAGTTATCACCAACAATTTAGCAGAACAGGTTCAGTGTACAGTACCCTGTCAAATTTTGTATCAACTGTAACACTTTGTGTTTTTGTACGGTTTTCTGATTTTCACGCACAAAATATATTTATCAATTTTCATGTCTAATCAGTGGGTTAAAATTTTAGCTGAAAGTCATCGACATTGTTA

mRNA sequence

CTCGTACTCCGTACTCGTTATTTCTCCTGTTTGTGTTGGGCGGTATGAAGACCATCGGAATACCATGGCCTGAATTCAACGATGGTCTTAGATACAACGACGTCGTTTCACCCTCAAATTCAGGTGTCTCTTTGATCCAGTTCTACTCCTCCAACCACCCTAGCTCAGCTCCATTGCAGGGTTGGTTACAGAGAATTCATAATGGTCAGATTACAATTGATGGTGATACTGTTACTGATCCAAACATTGTTCTTCGAGTTGGTTCGAAGTTGGTGTATCATCGACTTCCATGGAGTGAGCCTGAGACGCCTTTCTTGCTTGAAGTGCTCTATGAGGATGATGACATGATTGTTCTAAATAAGCCATCTGGATTGCAAGTTCTTCCTGGAGGACTCTTCCAGCAGCGCACTGTTTTGACACAATTGAAGTGGCATGTGAACAAGAATGAGAATTCAACACCAAGTCAACTTCATCCTGTTCCTGTTCACCGTCTAGGCAGAGGCACTTCAGGTGTATTGCTTTCTGCGAAGACGAAGAGTGCAAAGGCTCGCCTTGCAGCATATTTTGCTGATGGGACGTCATTGGTGAGAGGAAAAAGAGAGACAGACTCGGAGATTGGAGAGGAACGAAGGATAACCAAAATATATCGTGCACTAGTCAAGGGGATTATAGACACAAATGAGGTTCTGATCAACAAGCCAATTGGAATTATGCGATATCCTGGGGTTGCTAAGGGTCTATATGTTGCACTGCCCTCAGGTAAACCAGCCTTGAGCAAAGTCAGGGTTCTTGAAAGAGACATGGAGAAAAACCAAACACTGGTTCAGGTCCAGATACAGTCAGGAAGGCCTCACCAAATCCGTATTCATCTATCCCTAATTGGGTATCCACTCTTAGGTGATCCTCTTTATGTTGCTGGTGGTCAGCCAGAGTGTTTTGATTCAGAGCTCGTTGAAGAGGAATTTGCGGAAGATGGAGGGTATCAACGGCCTACAAAACCTGTTCCTGGAGACTGTGGGTATCATTTGCACGCACATGAAGTGACTCTATCCCATCCTACTACAAATGCGGTGATGAAGATAATTGCACCACTGCCTCCTATGCTGAAGTTGGATCAAGAGGCTAATTGAGGAAGTTATCACCAACAATTTAGCAGAACAGGTTCAGTGTACAGTACCCTGTCAAATTTTGTATCAACTGTAACACTTTGTGTTTTTGTACGGTTTTCTGATTTTCACGCACAAAATATATTTATCAATTTTCATGTCTAATCAGTGGGTTAAAATTTTAGCTGAAAGTCATCGACATTGTTA

Coding sequence (CDS)

ATGAAGACCATCGGAATACCATGGCCTGAATTCAACGATGGTCTTAGATACAACGACGTCGTTTCACCCTCAAATTCAGGTGTCTCTTTGATCCAGTTCTACTCCTCCAACCACCCTAGCTCAGCTCCATTGCAGGGTTGGTTACAGAGAATTCATAATGGTCAGATTACAATTGATGGTGATACTGTTACTGATCCAAACATTGTTCTTCGAGTTGGTTCGAAGTTGGTGTATCATCGACTTCCATGGAGTGAGCCTGAGACGCCTTTCTTGCTTGAAGTGCTCTATGAGGATGATGACATGATTGTTCTAAATAAGCCATCTGGATTGCAAGTTCTTCCTGGAGGACTCTTCCAGCAGCGCACTGTTTTGACACAATTGAAGTGGCATGTGAACAAGAATGAGAATTCAACACCAAGTCAACTTCATCCTGTTCCTGTTCACCGTCTAGGCAGAGGCACTTCAGGTGTATTGCTTTCTGCGAAGACGAAGAGTGCAAAGGCTCGCCTTGCAGCATATTTTGCTGATGGGACGTCATTGGTGAGAGGAAAAAGAGAGACAGACTCGGAGATTGGAGAGGAACGAAGGATAACCAAAATATATCGTGCACTAGTCAAGGGGATTATAGACACAAATGAGGTTCTGATCAACAAGCCAATTGGAATTATGCGATATCCTGGGGTTGCTAAGGGTCTATATGTTGCACTGCCCTCAGGTAAACCAGCCTTGAGCAAAGTCAGGGTTCTTGAAAGAGACATGGAGAAAAACCAAACACTGGTTCAGGTCCAGATACAGTCAGGAAGGCCTCACCAAATCCGTATTCATCTATCCCTAATTGGGTATCCACTCTTAGGTGATCCTCTTTATGTTGCTGGTGGTCAGCCAGAGTGTTTTGATTCAGAGCTCGTTGAAGAGGAATTTGCGGAAGATGGAGGGTATCAACGGCCTACAAAACCTGTTCCTGGAGACTGTGGGTATCATTTGCACGCACATGAAGTGACTCTATCCCATCCTACTACAAATGCGGTGATGAAGATAATTGCACCACTGCCTCCTATGCTGAAGTTGGATCAAGAGGCTAATTGA

Protein sequence

MKTIGIPWPEFNDGLRYNDVVSPSNSGVSLIQFYSSNHPSSAPLQGWLQRIHNGQITIDGDTVTDPNIVLRVGSKLVYHRLPWSEPETPFLLEVLYEDDDMIVLNKPSGLQVLPGGLFQQRTVLTQLKWHVNKNENSTPSQLHPVPVHRLGRGTSGVLLSAKTKSAKARLAAYFADGTSLVRGKRETDSEIGEERRITKIYRALVKGIIDTNEVLINKPIGIMRYPGVAKGLYVALPSGKPALSKVRVLERDMEKNQTLVQVQIQSGRPHQIRIHLSLIGYPLLGDPLYVAGGQPECFDSELVEEEFAEDGGYQRPTKPVPGDCGYHLHAHEVTLSHPTTNAVMKIIAPLPPMLKLDQEAN
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo02998.1Spo02998.1mRNA


Homology
BLAST of Spo02998.1 vs. NCBI nr
Match: gi|902187802|gb|KNA10992.1| (hypothetical protein SOVF_139290 [Spinacia oleracea])

HSP 1 Score: 731.5 bits (1887), Expect = 7.200e-208
Identity = 358/360 (99.44%), Postives = 359/360 (99.72%), Query Frame = 1

		  

Query: 2   KTIGIPWPEFNDGLRYNDVVSPSNSGVSLIQFYSSNHPSSAPLQGWLQRIHNGQITIDGD 61
           +TIGIPWPEFNDGLRYNDVVSPSNSGVSLIQFYSSNHPSSAPLQGWLQRIHNGQITIDGD
Sbjct: 34  ETIGIPWPEFNDGLRYNDVVSPSNSGVSLIQFYSSNHPSSAPLQGWLQRIHNGQITIDGD 93

Query: 62  TVTDPNIVLRVGSKLVYHRLPWSEPETPFLLEVLYEDDDMIVLNKPSGLQVLPGGLFQQR 121
           TVTDPNIVLRVGSKLVYHRLPWSEPETPFLLEVLYEDDDMIVLNKPSGLQVLPGGLFQQR
Sbjct: 94  TVTDPNIVLRVGSKLVYHRLPWSEPETPFLLEVLYEDDDMIVLNKPSGLQVLPGGLFQQR 153

Query: 122 TVLTQLKWHVNKNENSTPSQLHPVPVHRLGRGTSGVLLSAKTKSAKARLAAYFADGTSLV 181
           TVLTQLKWHVNKNENSTPSQLHPVPVHRLGRGTSGVLL AKTKSAKARLAAYFADGTSLV
Sbjct: 154 TVLTQLKWHVNKNENSTPSQLHPVPVHRLGRGTSGVLLCAKTKSAKARLAAYFADGTSLV 213

Query: 182 RGKRETDSEIGEERRITKIYRALVKGIIDTNEVLINKPIGIMRYPGVAKGLYVALPSGKP 241
           RGKRETDSEIGEERRITKIYRALVKGIIDTNEVLINKPIGIMRYPGVAKGLYVALPSGKP
Sbjct: 214 RGKRETDSEIGEERRITKIYRALVKGIIDTNEVLINKPIGIMRYPGVAKGLYVALPSGKP 273

Query: 242 ALSKVRVLERDMEKNQTLVQVQIQSGRPHQIRIHLSLIGYPLLGDPLYVAGGQPECFDSE 301
           ALSKVRVLERDMEKNQTLVQVQIQSGRPHQIRIHLSLIGYPLLGDPLYVAGGQPECFDSE
Sbjct: 274 ALSKVRVLERDMEKNQTLVQVQIQSGRPHQIRIHLSLIGYPLLGDPLYVAGGQPECFDSE 333

Query: 302 LVEEEFAEDGGYQRPTKPVPGDCGYHLHAHEVTLSHPTTNAVMKIIAPLPPMLKLDQEAN 361
           LVEEEFAEDGGYQRPTKPVPGDCGYHLHAHEVTLSHPTTNAVMKIIAPLPPMLKLDQEAN
Sbjct: 334 LVEEEFAEDGGYQRPTKPVPGDCGYHLHAHEVTLSHPTTNAVMKIIAPLPPMLKLDQEAN 393

BLAST of Spo02998.1 vs. NCBI nr
Match: gi|731318303|ref|XP_010669646.1| (PREDICTED: RNA pseudouridine synthase 5 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 623.2 bits (1606), Expect = 2.800e-175
Identity = 304/361 (84.21%), Postives = 330/361 (91.41%), Query Frame = 1

		  

Query: 1   MKTIGIPWPEFNDGLRYNDVVSPSNSGVSLIQFYSSNHPSSAPLQGWLQRIHNGQITIDG 60
           MKTIGIPWPE NDGL YNDVVSPS+SG++LIQFYSSNH SSAPLQGW+QRIHNGQITIDG
Sbjct: 1   MKTIGIPWPELNDGLTYNDVVSPSHSGLTLIQFYSSNHTSSAPLQGWVQRIHNGQITIDG 60

Query: 61  DTVTDPNIVLRVGSKLVYHRLPWSEPETPFLLEVLYEDDDMIVLNKPSGLQVLPGGLFQQ 120
            TVTDP  +LR  SKLVYHRLPW EP+TPFLLEVL+EDDDMI LNKPSGLQVLPGGLFQQ
Sbjct: 61  STVTDPVTILRADSKLVYHRLPWREPDTPFLLEVLFEDDDMIALNKPSGLQVLPGGLFQQ 120

Query: 121 RTVLTQLKWHVNKNENSTPSQ-LHPVPVHRLGRGTSGVLLSAKTKSAKARLAAYFADGTS 180
           RTVLTQLKWH  KN NST SQ L+PVPVHRLGRGTSGVLL AKTK AK  LAAYFADGTS
Sbjct: 121 RTVLTQLKWHTQKNGNSTLSQVLNPVPVHRLGRGTSGVLLCAKTKIAKTCLAAYFADGTS 180

Query: 181 LVRGKRETDSEIGEERRITKIYRALVKGIIDTNEVLINKPIGIMRYPGVAKGLYVALPSG 240
           LVRGKR+ +S++  ERRITKIYRALV+GIID+NEVLI+KPIG+MRYPGVAKGLYVALPSG
Sbjct: 181 LVRGKRDVNSKMEVERRITKIYRALVRGIIDSNEVLIDKPIGVMRYPGVAKGLYVALPSG 240

Query: 241 KPALSKVRVLERDMEKNQTLVQVQIQSGRPHQIRIHLSLIGYPLLGDPLYVAGGQPECFD 300
           KPALSKV VLERD+E++QTLVQV+IQSGRPHQIRIHLSLIG PLLGDPLYVAGGQPECFD
Sbjct: 241 KPALSKVGVLERDVERDQTLVQVEIQSGRPHQIRIHLSLIGCPLLGDPLYVAGGQPECFD 300

Query: 301 SELVEEEFAEDGGYQRPTKPVPGDCGYHLHAHEVTLSHPTTNAVMKIIAPLPPMLKLDQE 360
            EL++E+FAEDGGYQRP KPVPGDCGYHLHAHEVTLSHP+TN  +KIIAPLP MLK  +E
Sbjct: 301 PELIQEDFAEDGGYQRPAKPVPGDCGYHLHAHEVTLSHPSTNEAIKIIAPLPSMLKTVEE 360

BLAST of Spo02998.1 vs. NCBI nr
Match: gi|731412594|ref|XP_010658419.1| (PREDICTED: RNA pseudouridine synthase 5 isoform X1 [Vitis vinifera])

HSP 1 Score: 538.1 bits (1385), Expect = 1.200e-149
Identity = 253/356 (71.07%), Postives = 301/356 (84.55%), Query Frame = 1

		  

Query: 2   KTIGIPWPEFNDGLRYNDVVSPSNSGVSLIQFYSSNHPSSAPLQGWLQRIHNGQITIDGD 61
           KT G+PWP+FNDGL YNDVVS S+S ++LI +YSS H +SAPLQGWLQRI+ GQIT+DG 
Sbjct: 3   KTFGVPWPDFNDGLTYNDVVSASDSELTLIDYYSSKHKNSAPLQGWLQRINKGQITVDGT 62

Query: 62  TVTDPNIVLRVGSKLVYHRLPWSEPETPFLLEVLYEDDDMIVLNKPSGLQVLPGGLFQQR 121
            VT+P  +LR GSKLVYHRLPW EP+ P+LLE+LYEDDD+I LNKPSGLQVLPGGLFQQR
Sbjct: 63  VVTEPKTILRAGSKLVYHRLPWQEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQR 122

Query: 122 TVLTQLKWHVNKNENSTPS--QLHPVPVHRLGRGTSGVLLSAKTKSAKARLAAYFADGTS 181
           TVLTQL+W  NK +NS P+  + H VPVHRLGRGTSG+LL AKTK AK RLAAYFADGTS
Sbjct: 123 TVLTQLQWRANK-QNSLPACQESHSVPVHRLGRGTSGILLCAKTKLAKTRLAAYFADGTS 182

Query: 182 LVRGKRETDSEIGEERRITKIYRALVKGIIDTNEVLINKPIGIMRYPGVAKGLYVALPSG 241
           +V G R+ D +    R+I+KIYRALV GI+D +E++I +PIG+++YPGVAKGLYVA PSG
Sbjct: 183 VVGGNRDADMKSRTMRKISKIYRALVNGILDKDEIVIEQPIGMVQYPGVAKGLYVASPSG 242

Query: 242 KPALSKVRVLERDMEKNQTLVQVQIQSGRPHQIRIHLSLIGYPLLGDPLYVAGGQPECFD 301
           KPALSKV +LERD++ +  +VQV+IQSGRPHQIRIHLS IG+PLLGDPLYV GGQP+C D
Sbjct: 243 KPALSKVSILERDVQGDHMIVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVPGGQPKCCD 302

Query: 302 SELVEEEFAEDGGYQRPTKPVPGDCGYHLHAHEVTLSHPTTNAVMKIIAPLPPMLK 356
           +E   E +A DGGYQRP KPVPGDCGYHLHAH++ LSHPTTN V+KI APLPP+L+
Sbjct: 303 AEFTNESYALDGGYQRPVKPVPGDCGYHLHAHQLVLSHPTTNEVIKITAPLPPVLR 357

BLAST of Spo02998.1 vs. NCBI nr
Match: gi|1012247377|ref|XP_015942620.1| (PREDICTED: RNA pseudouridine synthase 5 [Arachis duranensis])

HSP 1 Score: 530.0 bits (1364), Expect = 3.200e-147
Identity = 254/355 (71.55%), Postives = 296/355 (83.38%), Query Frame = 1

		  

Query: 2   KTIGIPWPEFNDGLRYNDVVSPSNSGVSLIQFYSSNHPSSAPLQGWLQRIHNGQITIDGD 61
           +  G PWPEFNDGL Y+DVV P + G++LIQFYSS + SSAPLQGWLQRI N QIT+DG 
Sbjct: 9   RQFGCPWPEFNDGLIYHDVVPPPDDGLTLIQFYSSKYKSSAPLQGWLQRIKNKQITVDGS 68

Query: 62  TVTDPNIVLRVGSKLVYHRLPWSEPETPFLLEVLYEDDDMIVLNKPSGLQVLPGGLFQQR 121
            VTDP+ VLRVGSKLVYHRLPW EP+ P++LEVLYEDDDMI LNKPSGLQVLPGGLFQQR
Sbjct: 69  VVTDPDAVLRVGSKLVYHRLPWKEPDAPYILEVLYEDDDMIALNKPSGLQVLPGGLFQQR 128

Query: 122 TVLTQLKWHVNKNENSTPSQ-LHPVPVHRLGRGTSGVLLSAKTKSAKARLAAYFADGTSL 181
           TVLTQLKW  NK       Q LH VPVHRLGRGTSG+LL AKTK AKARLA+YFADGTS 
Sbjct: 129 TVLTQLKWEANKQSTVKAHQRLHSVPVHRLGRGTSGLLLCAKTKLAKARLASYFADGTSQ 188

Query: 182 VRGKRETDSEIGEERRITKIYRALVKGIIDTNEVLINKPIGIMRYPGVAKGLYVALPSGK 241
           + GKR+T+ E G   +I KIYRALV GI+D ++V+IN+PIGI++YPGVA GLYVA  SGK
Sbjct: 189 IGGKRDTNKEHG---KIAKIYRALVSGIVDNDKVIINQPIGIVKYPGVATGLYVASESGK 248

Query: 242 PALSKVRVLERDMEKNQTLVQVQIQSGRPHQIRIHLSLIGYPLLGDPLYVAGGQPECFDS 301
           PALS V VLER ++ N TLVQVQI+SGRPHQIRIHLS IG+PLLGDPLY  GGQP+C D 
Sbjct: 249 PALSIVNVLERGVQGNNTLVQVQIESGRPHQIRIHLSFIGHPLLGDPLYAVGGQPKCLDC 308

Query: 302 ELVEEEFAEDGGYQRPTKPVPGDCGYHLHAHEVTLSHPTTNAVMKIIAPLPPMLK 356
           ++++E FA DGGY+RPTKPVPGDCGY+LHAH++ +SHP TN V++IIAPLP +L+
Sbjct: 309 DVIDERFAADGGYERPTKPVPGDCGYYLHAHQLIISHPVTNEVIEIIAPLPSILQ 360

BLAST of Spo02998.1 vs. NCBI nr
Match: gi|1021566500|ref|XP_016174500.1| (PREDICTED: RNA pseudouridine synthase 5 [Arachis ipaensis])

HSP 1 Score: 526.6 bits (1355), Expect = 3.500e-146
Identity = 252/355 (70.99%), Postives = 294/355 (82.82%), Query Frame = 1

		  

Query: 2   KTIGIPWPEFNDGLRYNDVVSPSNSGVSLIQFYSSNHPSSAPLQGWLQRIHNGQITIDGD 61
           +  G PWPEFNDGL Y+DVV P + G++LIQFYSS + SSAPLQGWLQRI N QIT+DG 
Sbjct: 9   RQFGCPWPEFNDGLIYHDVVPPPDDGLTLIQFYSSKYKSSAPLQGWLQRIKNKQITVDGS 68

Query: 62  TVTDPNIVLRVGSKLVYHRLPWSEPETPFLLEVLYEDDDMIVLNKPSGLQVLPGGLFQQR 121
            VTDP+ VLRVG KLVYHRLPW EP+ P++LE+LYEDDDMI LNKPSGLQVLPGGLFQQR
Sbjct: 69  VVTDPDAVLRVGFKLVYHRLPWKEPDAPYILEILYEDDDMIALNKPSGLQVLPGGLFQQR 128

Query: 122 TVLTQLKWHVNKNENSTPSQ-LHPVPVHRLGRGTSGVLLSAKTKSAKARLAAYFADGTSL 181
           TVLTQLKW  NK       Q LH VPVHRLGRGTSG+LL AKTK AKARLA+YFADGTS 
Sbjct: 129 TVLTQLKWEANKQSTVKAHQRLHSVPVHRLGRGTSGLLLCAKTKRAKARLASYFADGTSQ 188

Query: 182 VRGKRETDSEIGEERRITKIYRALVKGIIDTNEVLINKPIGIMRYPGVAKGLYVALPSGK 241
           + GKR+T+ E G   +I KIYRALV GI+D ++V+IN+PIGI++YPGVA GLYVA  SGK
Sbjct: 189 IGGKRDTNKEHG---KIAKIYRALVSGIVDNDKVIINQPIGIVKYPGVATGLYVASESGK 248

Query: 242 PALSKVRVLERDMEKNQTLVQVQIQSGRPHQIRIHLSLIGYPLLGDPLYVAGGQPECFDS 301
           PALS V VLER ++ N TLVQVQI+SGRPHQIRIHLS IG+PLLGDPLY  GGQP+C D 
Sbjct: 249 PALSIVNVLERGVQGNNTLVQVQIESGRPHQIRIHLSFIGHPLLGDPLYSVGGQPKCLDC 308

Query: 302 ELVEEEFAEDGGYQRPTKPVPGDCGYHLHAHEVTLSHPTTNAVMKIIAPLPPMLK 356
           + ++E FA DGGY+RPTKPVPGDCGY+LHAH++ +SHP TN V++IIAPLP +L+
Sbjct: 309 DFIDERFAADGGYERPTKPVPGDCGYYLHAHQLIISHPVTNEVIEIIAPLPSILQ 360

BLAST of Spo02998.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QUM3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_139290 PE=4 SV=1)

HSP 1 Score: 731.5 bits (1887), Expect = 5.000e-208
Identity = 358/360 (99.44%), Postives = 359/360 (99.72%), Query Frame = 1

		  

Query: 2   KTIGIPWPEFNDGLRYNDVVSPSNSGVSLIQFYSSNHPSSAPLQGWLQRIHNGQITIDGD 61
           +TIGIPWPEFNDGLRYNDVVSPSNSGVSLIQFYSSNHPSSAPLQGWLQRIHNGQITIDGD
Sbjct: 34  ETIGIPWPEFNDGLRYNDVVSPSNSGVSLIQFYSSNHPSSAPLQGWLQRIHNGQITIDGD 93

Query: 62  TVTDPNIVLRVGSKLVYHRLPWSEPETPFLLEVLYEDDDMIVLNKPSGLQVLPGGLFQQR 121
           TVTDPNIVLRVGSKLVYHRLPWSEPETPFLLEVLYEDDDMIVLNKPSGLQVLPGGLFQQR
Sbjct: 94  TVTDPNIVLRVGSKLVYHRLPWSEPETPFLLEVLYEDDDMIVLNKPSGLQVLPGGLFQQR 153

Query: 122 TVLTQLKWHVNKNENSTPSQLHPVPVHRLGRGTSGVLLSAKTKSAKARLAAYFADGTSLV 181
           TVLTQLKWHVNKNENSTPSQLHPVPVHRLGRGTSGVLL AKTKSAKARLAAYFADGTSLV
Sbjct: 154 TVLTQLKWHVNKNENSTPSQLHPVPVHRLGRGTSGVLLCAKTKSAKARLAAYFADGTSLV 213

Query: 182 RGKRETDSEIGEERRITKIYRALVKGIIDTNEVLINKPIGIMRYPGVAKGLYVALPSGKP 241
           RGKRETDSEIGEERRITKIYRALVKGIIDTNEVLINKPIGIMRYPGVAKGLYVALPSGKP
Sbjct: 214 RGKRETDSEIGEERRITKIYRALVKGIIDTNEVLINKPIGIMRYPGVAKGLYVALPSGKP 273

Query: 242 ALSKVRVLERDMEKNQTLVQVQIQSGRPHQIRIHLSLIGYPLLGDPLYVAGGQPECFDSE 301
           ALSKVRVLERDMEKNQTLVQVQIQSGRPHQIRIHLSLIGYPLLGDPLYVAGGQPECFDSE
Sbjct: 274 ALSKVRVLERDMEKNQTLVQVQIQSGRPHQIRIHLSLIGYPLLGDPLYVAGGQPECFDSE 333

Query: 302 LVEEEFAEDGGYQRPTKPVPGDCGYHLHAHEVTLSHPTTNAVMKIIAPLPPMLKLDQEAN 361
           LVEEEFAEDGGYQRPTKPVPGDCGYHLHAHEVTLSHPTTNAVMKIIAPLPPMLKLDQEAN
Sbjct: 334 LVEEEFAEDGGYQRPTKPVPGDCGYHLHAHEVTLSHPTTNAVMKIIAPLPPMLKLDQEAN 393

BLAST of Spo02998.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D0M1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g036190 PE=4 SV=1)

HSP 1 Score: 623.2 bits (1606), Expect = 1.900e-175
Identity = 304/361 (84.21%), Postives = 330/361 (91.41%), Query Frame = 1

		  

Query: 1   MKTIGIPWPEFNDGLRYNDVVSPSNSGVSLIQFYSSNHPSSAPLQGWLQRIHNGQITIDG 60
           MKTIGIPWPE NDGL YNDVVSPS+SG++LIQFYSSNH SSAPLQGW+QRIHNGQITIDG
Sbjct: 1   MKTIGIPWPELNDGLTYNDVVSPSHSGLTLIQFYSSNHTSSAPLQGWVQRIHNGQITIDG 60

Query: 61  DTVTDPNIVLRVGSKLVYHRLPWSEPETPFLLEVLYEDDDMIVLNKPSGLQVLPGGLFQQ 120
            TVTDP  +LR  SKLVYHRLPW EP+TPFLLEVL+EDDDMI LNKPSGLQVLPGGLFQQ
Sbjct: 61  STVTDPVTILRADSKLVYHRLPWREPDTPFLLEVLFEDDDMIALNKPSGLQVLPGGLFQQ 120

Query: 121 RTVLTQLKWHVNKNENSTPSQ-LHPVPVHRLGRGTSGVLLSAKTKSAKARLAAYFADGTS 180
           RTVLTQLKWH  KN NST SQ L+PVPVHRLGRGTSGVLL AKTK AK  LAAYFADGTS
Sbjct: 121 RTVLTQLKWHTQKNGNSTLSQVLNPVPVHRLGRGTSGVLLCAKTKIAKTCLAAYFADGTS 180

Query: 181 LVRGKRETDSEIGEERRITKIYRALVKGIIDTNEVLINKPIGIMRYPGVAKGLYVALPSG 240
           LVRGKR+ +S++  ERRITKIYRALV+GIID+NEVLI+KPIG+MRYPGVAKGLYVALPSG
Sbjct: 181 LVRGKRDVNSKMEVERRITKIYRALVRGIIDSNEVLIDKPIGVMRYPGVAKGLYVALPSG 240

Query: 241 KPALSKVRVLERDMEKNQTLVQVQIQSGRPHQIRIHLSLIGYPLLGDPLYVAGGQPECFD 300
           KPALSKV VLERD+E++QTLVQV+IQSGRPHQIRIHLSLIG PLLGDPLYVAGGQPECFD
Sbjct: 241 KPALSKVGVLERDVERDQTLVQVEIQSGRPHQIRIHLSLIGCPLLGDPLYVAGGQPECFD 300

Query: 301 SELVEEEFAEDGGYQRPTKPVPGDCGYHLHAHEVTLSHPTTNAVMKIIAPLPPMLKLDQE 360
            EL++E+FAEDGGYQRP KPVPGDCGYHLHAHEVTLSHP+TN  +KIIAPLP MLK  +E
Sbjct: 301 PELIQEDFAEDGGYQRPAKPVPGDCGYHLHAHEVTLSHPSTNEAIKIIAPLPSMLKTVEE 360

BLAST of Spo02998.1 vs. UniProtKB/TrEMBL
Match: G7I9K6_MEDTR (Pseudouridine synthase Rlu family protein OS=Medicago truncatula GN=MTR_1g095580 PE=4 SV=2)

HSP 1 Score: 525.0 bits (1351), Expect = 7.100e-146
Identity = 249/360 (69.17%), Postives = 298/360 (82.78%), Query Frame = 1

		  

Query: 2   KTIGIPWPEFNDGLRYNDVVSPSNSGVSLIQFYSSNHPSSAPLQGWLQRIHNGQITIDGD 61
           K IGIPWPEFNDGL Y+DVV PS++G++LI+FYS+ + SSAPLQGWLQRI + QIT+D  
Sbjct: 5   KKIGIPWPEFNDGLSYDDVVRPSDAGLTLIEFYSTKYKSSAPLQGWLQRIKSDQITLDAR 64

Query: 62  TVTDPNIVLRVGSKLVYHRLPWSEPETPFLLEVLYEDDDMIVLNKPSGLQVLPGGLFQQR 121
            VTDPN +LRVGSKLVYHR+PW EP+ P  +EVLYEDDD+I LNKPSGLQVLPGGLFQQR
Sbjct: 65  VVTDPNTILRVGSKLVYHRIPWKEPDAPHTIEVLYEDDDIIALNKPSGLQVLPGGLFQQR 124

Query: 122 TVLTQLKWHVNKNENSTPSQL-HPVPVHRLGRGTSGVLLSAKTKSAKARLAAYFADGTSL 181
           TVLTQL+W  N        Q  HPVPVHRLGRGTSG+LL AKTK A+ARLA+YFADGTS 
Sbjct: 125 TVLTQLQWETNNKSTIEAHQKPHPVPVHRLGRGTSGILLCAKTKLARARLASYFADGTSR 184

Query: 182 VRGKRETDSEIGEERRITKIYRALVKGIIDTNEVLINKPIGIMRYPGVAKGLYVALPSGK 241
           + GK  T+ E+G   +I KIYRALV GII+ ++V IN+PIG+++YPGVAKGLYVA  SGK
Sbjct: 185 IEGKGHTNQELG---KIAKIYRALVSGIINNDQVTINQPIGMVKYPGVAKGLYVASQSGK 244

Query: 242 PALSKVRVLERDMEKNQTLVQVQIQSGRPHQIRIHLSLIGYPLLGDPLYVAGGQPECFDS 301
           PALS V VLER++++N TLVQV+IQSGRPHQIRIHLS IG+PLLGDPLY  GGQP+C D 
Sbjct: 245 PALSVVHVLERNVKENSTLVQVKIQSGRPHQIRIHLSFIGHPLLGDPLYAVGGQPKCLDC 304

Query: 302 ELVEEEFAEDGGYQRPTKPVPGDCGYHLHAHEVTLSHPTTNAVMKIIAPLPPMLKLDQEA 361
           + ++E FAEDGGY RP+KPVPGDCGYHLHAH + LSHP TN ++++IAPLP +L+  +EA
Sbjct: 305 DFLDESFAEDGGYTRPSKPVPGDCGYHLHAHRLFLSHPITNEIIEMIAPLPSILQTHEEA 361

BLAST of Spo02998.1 vs. UniProtKB/TrEMBL
Match: A0A151U5V2_CAJCA (RNA pseudourine synthase 5 OS=Cajanus cajan GN=KK1_007400 PE=4 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 2.100e-145
Identity = 251/360 (69.72%), Postives = 302/360 (83.89%), Query Frame = 1

		  

Query: 2   KTIGIPWPEFNDGLRYNDVVSPSNSGVSLIQFYSSNHPSSAPLQGWLQRIHNGQITIDGD 61
           K  GIPWP+ NDGL Y+DVVSPS++G++L+QFYS+N+ SSAPLQGWLQRI +GQIT+DG 
Sbjct: 5   KRFGIPWPDCNDGLSYDDVVSPSDAGLTLLQFYSTNYKSSAPLQGWLQRIKSGQITVDGS 64

Query: 62  TVTDPNIVLRVGSKLVYHRLPWSEPETPFLLEVLYEDDDMIVLNKPSGLQVLPGGLFQQR 121
            VTD + VLRV SKLVYHRLPW EPE P ++EVLYEDDDMI LNKPSGLQVLPGGLFQQR
Sbjct: 65  VVTDSDTVLRVASKLVYHRLPWKEPEAPHMIEVLYEDDDMIALNKPSGLQVLPGGLFQQR 124

Query: 122 TVLTQLKWHVNKNENSTP--SQLHPVPVHRLGRGTSGVLLSAKTKSAKARLAAYFADGTS 181
           TVLTQL+W  N N+ S     + HPVPVHRLGRGTSG+LL AKTK A+ARLA+YFADGTS
Sbjct: 125 TVLTQLQWECN-NQGSCEMHKRPHPVPVHRLGRGTSGILLCAKTKVARARLASYFADGTS 184

Query: 182 LVRGKRETDSEIGEERRITKIYRALVKGIIDTNEVLINKPIGIMRYPGVAKGLYVALPSG 241
            +  KR+T+ +IG   +I KIYRALV GI++ +++ IN+PIGI++YPGVAKGLYVA  SG
Sbjct: 185 HIGVKRDTNQKIG---KIAKIYRALVSGIVENDKMTINQPIGIVKYPGVAKGLYVASQSG 244

Query: 242 KPALSKVRVLERDMEKNQTLVQVQIQSGRPHQIRIHLSLIGYPLLGDPLYVAGGQPECFD 301
           KPALS V +LER++++N TLVQV+IQSGRPHQIRIHLS IG+PLLGDPLY   GQP+C D
Sbjct: 245 KPALSAVEILERNIQENSTLVQVKIQSGRPHQIRIHLSFIGHPLLGDPLYGVDGQPKCLD 304

Query: 302 SELVEEEFAEDGGYQRPTKPVPGDCGYHLHAHEVTLSHPTTNAVMKIIAPLPPMLKLDQE 360
            + ++E FAEDGGYQRPTKPVPGDCGYHLHAH++ LSHP TN +++IIAPLP +L+   E
Sbjct: 305 CDFIDESFAEDGGYQRPTKPVPGDCGYHLHAHKLFLSHPITNELVEIIAPLPTVLQTPDE 360

BLAST of Spo02998.1 vs. UniProtKB/TrEMBL
Match: A0A0B2P011_GLYSO (Pseudouridine synthase OS=Glycine soja GN=glysoja_000496 PE=3 SV=1)

HSP 1 Score: 521.2 bits (1341), Expect = 1.000e-144
Identity = 248/360 (68.89%), Postives = 298/360 (82.78%), Query Frame = 1

		  

Query: 2   KTIGIPWPEFNDGLRYNDVVSPSNSGVSLIQFYSSNHPSSAPLQGWLQRIHNGQITIDGD 61
           K  GIPWPE NDGL Y+DVV  S++G +LI+FYS+ + SSAPLQGWLQRI +GQIT+DG 
Sbjct: 5   KKFGIPWPECNDGLSYDDVVRASDAGATLIEFYSTKYKSSAPLQGWLQRIKSGQITVDGG 64

Query: 62  TVTDPNIVLRVGSKLVYHRLPWSEPETPFLLEVLYEDDDMIVLNKPSGLQVLPGGLFQQR 121
            VTD N VLRVGSKL+YHRLPW EP+ P +++VLYEDDDMI LNKPSGLQVLPGGL+QQR
Sbjct: 65  VVTDSNTVLRVGSKLIYHRLPWKEPDAPHMIDVLYEDDDMIALNKPSGLQVLPGGLYQQR 124

Query: 122 TVLTQLKWHVNKNEN-STPSQLHPVPVHRLGRGTSGVLLSAKTKSAKARLAAYFADGTSL 181
           T+LTQL+W  N         +LHPVPVHRLGRGTSG+LL AKTK A+ARLA++FADGTS 
Sbjct: 125 TILTQLQWEANNQGTCEMHKRLHPVPVHRLGRGTSGILLCAKTKLARARLASHFADGTSH 184

Query: 182 VRGKRETDSEIGEERRITKIYRALVKGIIDTNEVLINKPIGIMRYPGVAKGLYVALPSGK 241
           V GKR+T  E+G   +I K+YRALV GI++ ++V IN+PIGI++YPGVAKGLYVA  SGK
Sbjct: 185 VGGKRDTKQELG---KIAKMYRALVSGIVENDKVTINQPIGIVKYPGVAKGLYVASESGK 244

Query: 242 PALSKVRVLERDMEKNQTLVQVQIQSGRPHQIRIHLSLIGYPLLGDPLYVAGGQPECFDS 301
           PALS V +LE ++++N TLVQV+IQSGRPHQIRIHLS IG+PLLGDPLY  GGQP+C D 
Sbjct: 245 PALSVVDILETNIQENSTLVQVKIQSGRPHQIRIHLSFIGHPLLGDPLYGVGGQPKCLDC 304

Query: 302 ELVEEEFAEDGGYQRPTKPVPGDCGYHLHAHEVTLSHPTTNAVMKIIAPLPPMLKLDQEA 361
           + V+E FAEDGGYQRPTKPVPGDCGY+LHAH++ LSHPTTN +++IIAPLP  L   +EA
Sbjct: 305 DFVDESFAEDGGYQRPTKPVPGDCGYYLHAHKLVLSHPTTNELIEIIAPLPSALHTAEEA 361

BLAST of Spo02998.1 vs. ExPASy Swiss-Prot
Match: PUS5_ARATH (RNA pseudouridine synthase 5 OS=Arabidopsis thaliana GN=At3g52260 PE=2 SV=2)

HSP 1 Score: 486.9 bits (1252), Expect = 1.900e-136
Identity = 239/358 (66.76%), Postives = 291/358 (81.28%), Query Frame = 1

		  

Query: 4   IGIPWPEFNDGLRYNDVVSPSNSGVSLI-QFYSSNHPSSAPLQGWLQRIHNGQITIDGDT 63
           IG+PWPE NDGL Y D +S S S ++ + +FY + + SSAPL GW+QRI NGQI IDG+ 
Sbjct: 8   IGLPWPELNDGLAYKDAISSSESELTTVSEFYFTKYKSSAPLLGWIQRIQNGQIQIDGEV 67

Query: 64  VTDPNIVLRVGSKLVYHRLPWSEPETPFLLEVLYEDDDMIVLNKPSGLQVLPGGLFQQRT 123
           V DPN +LR GSKLVY RLPW EP+TP+ LEVLYEDDD+I LNKPSGLQVLPGGLFQQRT
Sbjct: 68  VKDPNTLLRSGSKLVYSRLPWKEPDTPYSLEVLYEDDDLIALNKPSGLQVLPGGLFQQRT 127

Query: 124 VLTQLKWHVNKNENSTPSQL--HPVPVHRLGRGTSGVLLSAKTKSAKARLAAYFADGTSL 183
           VLTQL+W   KN++   S+   HPVPVHRLGRGTSG+LL AKTK AK +LAAYFA+GTSL
Sbjct: 128 VLTQLQWCFGKNDSYIGSRESPHPVPVHRLGRGTSGILLCAKTKLAKTKLAAYFAEGTSL 187

Query: 184 VRGKRETDSEIGEERRITKIYRALVKGIIDTNEVLINKPIGIMRYPGVAKGLYVALPSGK 243
           V G    D E G  R+++KIYRAL  GI++ +EV+I +PIG++RYPGVA+GLYVA P GK
Sbjct: 188 V-GSGNLDQECGTGRKLSKIYRALADGIVEEDEVVIKQPIGVVRYPGVAQGLYVASPEGK 247

Query: 244 PALSKVRVLERDMEKNQTLVQVQIQSGRPHQIRIHLSLIGYPLLGDPLYVAGGQPECFDS 303
           PA SKV VLERD EKN +LV+V+IQSGRPHQIRIHL+ +G+PL+GDPLYVAGGQP+CFD 
Sbjct: 248 PAFSKVFVLERDREKNCSLVKVEIQSGRPHQIRIHLAYMGHPLVGDPLYVAGGQPKCFDP 307

Query: 304 ELVEE--EFAEDGGYQRPTKPVPGDCGYHLHAHEVTLSH-PTTNAVMKIIAPLPPMLK 356
           +LV++   FAEDGGY+RP + VPGDCGYHLHAH+V L +   T+ V+KI+APLPP+L+
Sbjct: 308 DLVDDAAAFAEDGGYRRPNQAVPGDCGYHLHAHQVELPNLLNTHKVVKIVAPLPPILQ 364

BLAST of Spo02998.1 vs. ExPASy Swiss-Prot
Match: PUS5_ORYSJ (RNA pseudouridine synthase 5 OS=Oryza sativa subsp. japonica GN=Os03g0288500 PE=2 SV=2)

HSP 1 Score: 448.0 bits (1151), Expect = 1.000e-124
Identity = 222/366 (60.66%), Postives = 281/366 (76.78%), Query Frame = 1

		  

Query: 3   TIGIPWPEFNDGLRYNDVVSPSNSGVS--LIQFYSSNHPSSAPLQGWLQRIHNGQITIDG 62
           + G PWPEFN+G+ Y D    +++G +  LI+FYS+++ SSAPL GW++RI +GQIT+DG
Sbjct: 23  SFGTPWPEFNEGISYIDTFRCADAGATTTLIEFYSTSYKSSAPLPGWIKRIRDGQITVDG 82

Query: 63  DTVTDPNIVLRVGSKLVYHRLPWSEPETPFLLEVLYEDDDMIVLNKPSGLQVLPGGLFQQ 122
           +  TDP+++LR GSKLVYHRLPW EP  P LL+VLYEDDDMI LNKPSGLQVLP GLFQQ
Sbjct: 83  EVATDPDMILREGSKLVYHRLPWQEPFAPHLLDVLYEDDDMIALNKPSGLQVLPKGLFQQ 142

Query: 123 RTVLTQLK---WHVNKN--ENSTPSQLHPVPVHRLGRGTSGVLLSAKTKSAKARLAAYFA 182
           RTVL QL+   W +  +       +Q HPVPVHRLGRGTSG+LL AKTK AKA+LAAYFA
Sbjct: 143 RTVLAQLQLKDWKMPSSFCSKRKDAQSHPVPVHRLGRGTSGLLLCAKTKLAKAQLAAYFA 202

Query: 183 DGTSLVRGKRETDSEIGEERRITKIYRALVKGIIDTNEVLINKPIGIMRYPGVAKGLYVA 242
           +G +   GK   +++I + R+I+K YRALV GI++ +EV+I +PIG++RYPGVA+GLY A
Sbjct: 203 EGATNA-GKSRDETDICKARKISKFYRALVTGILENDEVMITQPIGLVRYPGVAEGLYAA 262

Query: 243 LPSGKPALSKVRVLERDMEKNQTLVQVQIQSGRPHQIRIHLSLIGYPLLGDPLYVAGGQP 302
             SGKPA+SKVRVLER    N TL+QV+I SGRPHQIRIHL+ IG+PL+ DPLY  GGQP
Sbjct: 263 CSSGKPAMSKVRVLERLKIHNHTLIQVEIHSGRPHQIRIHLAYIGHPLVDDPLYGIGGQP 322

Query: 303 ECFDSE--LVEEEFAEDGGYQRPTKPVPGDCGYHLHAHEVTLSHPTTNAVMKIIAPLPPM 360
           +  + E     + FA DGGY+RP +PVPGDCGYHLHAH + L HPTTN ++KI APLP +
Sbjct: 323 KFDEPEPTSTADSFAYDGGYERPLQPVPGDCGYHLHAHWLVLCHPTTNEMIKITAPLPHI 382

BLAST of Spo02998.1 vs. ExPASy Swiss-Prot
Match: Y1592_SYNY3 (Uncharacterized RNA pseudouridine synthase slr1592 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1592 PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.300e-47
Identity = 126/326 (38.65%), Postives = 166/326 (50.92%), Query Frame = 1

		  

Query: 30  LIQFYSSNHPSSAPLQGWLQRIHNGQITIDGDTVTDPNIVLRVGSKLVYHRLPWSEPETP 89
           ++ FYS  +  S   Q W +RI  GQI +DG TV DP   L+ G  L Y R PW EPE P
Sbjct: 1   MLDFYSQRYLHSER-QAWQERIEQGQIEVDGKTV-DPTYPLQAGQTLTYWRSPWVEPEVP 60

Query: 90  FLLEVLYEDDDMIVLNKPSGLQVLPGGLFQQRTVLTQLKWHVNKNENSTPSQLHPVPVHR 149
             L VL+ D+D+  ++KPSGL VLPGG F   TVL QLK            Q    P+HR
Sbjct: 61  LQLSVLHRDEDLWAIDKPSGLPVLPGGDFVYHTVLEQLKIQY--------PQESLFPLHR 120

Query: 150 LGRGTSGVLLSAKTKSAKARLAAYFADGTSLVRGKRETDSEIGEERRITKIYRALVKGII 209
           LG GTSG+LL  ++   +  L+  F                   E    KIYR ++    
Sbjct: 121 LGTGTSGLLLLGRSTLGRRELSRQF------------------REHICRKIYRTVIGPCD 180

Query: 210 DTNEVLINKPIGIMRYPGVAKGLYVALPSGKPALSKVRVLERDMEKNQTLVQVQIQSGRP 269
              +   ++ IG + YP +   +Y A   GKPA S  R+L R  EK  T ++V+I++GRP
Sbjct: 181 LPEKFECHQAIGKIPYPQLGY-IYAASSHGKPAQSYGRILARSPEK--TWLEVEIRTGRP 240

Query: 270 HQIRIHLSLIGYPLLGDPLYVAGGQP-ECFDSELVEEEFAEDGGYQRPTKPVPGDCGYHL 329
           HQIRIHL+ +GYPLLGD LY  GG P  C  +                    P D GY L
Sbjct: 241 HQIRIHLASLGYPLLGDRLYGPGGVPINCRTAR-------------------PSDGGYTL 276

Query: 330 HAHEVTLSHPTTNAVMKIIAPLPPML 355
           H++++   H  T   +K+ APLPP L
Sbjct: 301 HSYQLGFLHLHTQQAIKLTAPLPPEL 276

BLAST of Spo02998.1 vs. ExPASy Swiss-Prot
Match: RLUD_PSEAE (Ribosomal large subunit pseudouridine synthase D OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=rluD PE=3 SV=2)

HSP 1 Score: 137.9 bits (346), Expect = 2.200e-31
Identity = 111/336 (33.04%), Postives = 171/336 (50.89%), Query Frame = 1

		  

Query: 40  SSAPLQGWLQRIHNGQITIDGDTVTDPNIVLRVGSKLVYHRLPWSEPE---TPFLLEVLY 99
           S + L GW++   +G++T+DG  V  P  ++  G++LV      ++ E       LE++Y
Sbjct: 32  SRSRLAGWIK---DGRLTVDG-AVLRPRDIVHSGAQLVLEAEQEAQGEWLAQDIELEIVY 91

Query: 100 EDDDMIVLNKPSGLQVLPGGLFQQRTVLTQLKWHVNKNENSTPSQLHPVPVHRLGRGTSG 159
           ED+ ++V++KP+GL V P    Q  T+L  L +HV    N   + +    VHRL + T+G
Sbjct: 92  EDEHILVIDKPAGLVVHPAAGHQDGTLLNALLYHVPDIANVPRAGI----VHRLDKDTTG 151

Query: 160 VLLSAKTKSAKARLAAYFADGTSLVRGKRETDSEIGEERRITKIYRALVKGIIDTNEVLI 219
           +++ AKT  A  +L A                    + R +++IY A+V G+I T+   I
Sbjct: 152 LMVVAKTLEAHTKLVAQL------------------QARSVSRIYEAIVIGVI-TSGGTI 211

Query: 220 NKPIGIMRYPGVAKGLYVALPSGKPALSKVRVLERDMEKNQTLVQVQIQSGRPHQIRIHL 279
           + PIG  R+ GV +     + +GK A+S  RVLER      T  +V++++GR HQIR+H+
Sbjct: 212 DAPIG--RH-GVQRQKMAVVDAGKVAVSHYRVLERFRAHTHT--RVKLETGRTHQIRVHM 271

Query: 280 SLIGYPLLGDPLYVAGGQ---PECFDSELVE--EEFAEDGGYQRPTKPVPGDCGYHLHAH 339
           S IGYPL+GDP+Y  GG+   P      LV+   EF                    LHA 
Sbjct: 272 SHIGYPLVGDPVY--GGRFRIPPVASQTLVQTLREFPRQA----------------LHAR 317

Query: 340 EVTLSHPTTNAVMKIIAPLP-------PMLKLDQEA 361
            + L HP T   MK  +PLP        +L+ D+EA
Sbjct: 332 FLELDHPATGVRMKWESPLPEDFLWLLSLLRQDREA 317

BLAST of Spo02998.1 vs. ExPASy Swiss-Prot
Match: Y1758_AQUAE (Uncharacterized RNA pseudouridine synthase aq_1758 OS=Aquifex aeolicus (strain VF5) GN=aq_1758 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.600e-26
Identity = 80/243 (32.92%), Postives = 129/243 (53.09%), Query Frame = 1

		  

Query: 51  IHNGQITIDGDTVTDPNIVLRVGSKLVYHRLPWSEP----ETPFLLEVLYEDDDMIVLNK 110
           +  G + ++G+ V  P+  LR G +++ H +P  EP         + ++YED+D+ V+ K
Sbjct: 38  VKEGLVYVNGEEVRKPSRKLREGERVILH-VPEPEPLDVKPENIPINIIYEDEDIAVVEK 97

Query: 111 PSGLQVLPGGLFQQRTVLTQLKWHVNKNENSTPSQLHPVPVHRLGRGTSGVLLSAKTKSA 170
           P GL V P   +   T++  L +H+ K+ +S      P  VHRL + T+GV++ AK  +A
Sbjct: 98  PCGLVVHPSPGYTSGTLVNALLYHI-KDLSSIGGVERPGIVHRLDKETAGVMVIAKNNTA 157

Query: 171 KARLAAYFADGTSLVRGKRETDSEIGEERRITKIYRALVKGIIDTNEVLINKPIGIMRYP 230
              L   F                  +ER+  K Y+ LVKG++  +   I+ PI   R+P
Sbjct: 158 HRNLVRQF------------------QERKTEKFYKVLVKGLVKKDYGAIDTPIA--RHP 217

Query: 231 GVAKGLYVALPSGKPALSKVRVLERDMEKNQTLVQVQIQSGRPHQIRIHLSLIGYPLLGD 290
              K  +V    GK AL++  VL+R  +   TL++V+I +GR HQIR+H + IG+P+LGD
Sbjct: 218 VDRKRFWVR-KEGKEALTEYWVLKRYEKYEITLLKVKIHTGRTHQIRVHFASIGHPVLGD 257

BLAST of Spo02998.1 vs. TAIR (Arabidopsis)
Match: AT3G52260.3 (Pseudouridine synthase family protein)

HSP 1 Score: 439.5 bits (1129), Expect = 2.000e-123
Identity = 232/405 (57.28%), Postives = 286/405 (70.62%), Query Frame = 1

		  

Query: 4   IGIPWPEFNDGLRYNDVVSPSNSGVSLI-QFYSSNHPSSAPL------------------ 63
           IG+PWPE NDGL Y D +S S S ++ + +FY + + SSAPL                  
Sbjct: 8   IGLPWPELNDGLAYKDAISSSESELTTVSEFYFTKYKSSAPLLGFLLFFFLYSSSTIISF 67

Query: 64  ------------QGWLQRIHNGQITIDGDTVTDPNIVLRVGSKLVYHRLPWSEPETPFLL 123
                        G+ +   +  I IDG+ V DPN +LR GSKLVY RLPW EP+TP+ L
Sbjct: 68  LLSILFNHLSFLGGFNESKTDRFIQIDGEVVKDPNTLLRSGSKLVYSRLPWKEPDTPYSL 127

Query: 124 EVLYEDDDMIVLNKPSGLQVLPGGLFQQRTVLTQLKWHVNKNENSTPSQL--HPVPVHRL 183
           EVLYEDDD+I LNKPSGLQVLPGGLFQQRTVLTQL+W   KN++   S+   HPVPVHRL
Sbjct: 128 EVLYEDDDLIALNKPSGLQVLPGGLFQQRTVLTQLQWCFGKNDSYIGSRESPHPVPVHRL 187

Query: 184 GRGTSGVLLSAKTKSAKARLAAYFADGTSLVRGKRETDSEIGEERRITKIYRALVKGIID 243
           GRGTSG+LL AKTK AK +LAAYFA+GTSLV G    D E G  R+++KIYRAL  GI++
Sbjct: 188 GRGTSGILLCAKTKLAKTKLAAYFAEGTSLV-GSGNLDQECGTGRKLSKIYRALADGIVE 247

Query: 244 TNEVLINKPIGIMRYPGVAKGLYVALPSGKPALSKVRVLERDMEKNQTLVQVQIQSGRPH 303
            +EV+I +PIG++RYPGVA+GLYVA P GKPA SKV VLERD EKN +LV+V+IQSGRPH
Sbjct: 248 EDEVVIKQPIGVVRYPGVAQGLYVASPEGKPAFSKVFVLERDREKNCSLVKVEIQSGRPH 307

Query: 304 QIRIHLSLIGYPLL-----------------GDPLYVAGGQPECFDSELVEE--EFAEDG 356
           QIRIHL+ +G+PL+                 GDPLYVAGGQP+CFD +LV++   FAEDG
Sbjct: 308 QIRIHLAYMGHPLVEMTMFTGSECLRADQSAGDPLYVAGGQPKCFDPDLVDDAAAFAEDG 367

BLAST of Spo02998.1 vs. TAIR (Arabidopsis)
Match: AT5G51140.2 (Pseudouridine synthase family protein)

HSP 1 Score: 75.5 bits (184), Expect = 7.600e-14
Identity = 72/278 (25.90%), Postives = 132/278 (47.48%), Query Frame = 1

		  

Query: 26  SGVSLIQFYSSNHPSSAPLQGWLQRIHNGQITIDGDTVTDPNIVLRVGSKLVYHRLPWSE 85
           +G +++  ++       P   ++  + +G+I +DG+ V    IV    S+ + H L   E
Sbjct: 72  TGKTIVDLFADEF-KGRPRDYYVGAVKSGRIKVDGEIVPVSYIVK--SSQKITHFLHRHE 131

Query: 86  PETPFLLE---VLYEDDDMIVLNKPSGLQVLPGGLFQQRTVLTQLKWHVNKNENSTPSQL 145
           P  P +++   +L+++ D++ + KP+ + V P G +++ T++  L     +++  T    
Sbjct: 132 P--PVMIDDVVILHQEPDVVTVCKPASVPVHPCGQYRKNTIVGILD---AEHDLGTL--- 191

Query: 146 HPVPVHRLGRGTSGVLLSAKTKSAKARLAAYFADGTSLVRGKRETDSEIGEERRITKIYR 205
              P+HRL R  SG+L+ A+T +AKA       +G                   + K Y 
Sbjct: 192 --FPIHRLDRLVSGLLIIART-AAKADFFRQQIEGGM-----------------VKKRYI 251

Query: 206 ALVKGIIDTNEVLINKPIGIMRYPGVAKGLYVALPS----------GKPALSKVRVLERD 265
           A V G+   +E++++  I    Y G ++G   A  +          GKPA +K   +  D
Sbjct: 252 AKVIGVFPEDEMIVDANIN---YNG-SEGRSTAEDANSSGDDKKVKGKPACTKFTRI--D 311

Query: 266 MEKNQTLVQVQIQSGRPHQIRIHLSLIGYPLLGDPLYV 291
                +LV  +  +GR HQIR+HL   G+P+  DPLY+
Sbjct: 312 TNGTHSLVSCEPVTGRTHQIRVHLQYTGHPIANDPLYL 312

BLAST of Spo02998.1 vs. TAIR (Arabidopsis)
Match: AT3G19440.1 (Pseudouridine synthase family protein)

HSP 1 Score: 69.3 bits (168), Expect = 5.400e-12
Identity = 77/265 (29.06%), Postives = 122/265 (46.04%), Query Frame = 1

		  

Query: 84  SEPETPFLLE-VLYEDDDMIVLNKPSGLQVLPGGLFQQRTVLTQLKWHVNKNENSTPSQL 143
           S+ E  F+   VLY+D  +IVLNKP GL V  G     +T + +L     K + S   +L
Sbjct: 174 SDEERKFVCSLVLYKDPAIIVLNKPHGLAVQGGSGI--KTSIDELAASCLKFDKSESPRL 233

Query: 144 HPVPVHRLGRGTSGVLLSAKTKSAKARLAAYFADGTSLVRGKRETDSEIGEERRITKI-- 203
               VHRL R  SG+L+ A+T++A   L + F       R K    S  G ++ +  +  
Sbjct: 234 ----VHRLDRDCSGLLVLARTQTAATVLHSIF-------REKTTGASAYGVKKNVKSLKR 293

Query: 204 -YRALVKGIIDTNEVLINKPI-GIMRYPGVAKGLYV----ALPSGKPALSKVRVLERDME 263
            Y ALV G        I+ P+  ++   G ++ + V     L S + A+++ RV+E    
Sbjct: 294 KYMALVIGCPPRQRGQISAPLRKVVVDDGKSERITVNDNGELVSTQHAITEYRVIE-SSP 353

Query: 264 KNQTLVQVQIQSGRPHQIRIHLS-LIGYPLLGDPLYVAGGQPECFDSELVEEEFAEDGGY 323
              T ++++  +GR HQ+R+H + ++G P++GD  Y  G Q        V  E       
Sbjct: 354 HGYTWLELRPLTGRKHQLRVHCAEVLGTPIVGD--YKYGWQAHKAREPFVSSE------- 413

Query: 324 QRPTKPVPGDCGYHLHAHEVTLSHP 339
             PTK      G  L   +V+   P
Sbjct: 414 NNPTKQSSSPFGLDLDGGDVSSKQP 415

BLAST of Spo02998.1 vs. TAIR (Arabidopsis)
Match: AT1G76050.2 (Pseudouridine synthase family protein)

HSP 1 Score: 68.9 bits (167), Expect = 7.100e-12
Identity = 64/229 (27.95%), Postives = 97/229 (42.36%), Query Frame = 1

		  

Query: 136 NSTPSQLHPVPVHRLGRGTSGVLLSAKTKSAKARLAAYFADGTSLVRGKRETDSEIGEER 195
           +S  + + P  VHRL +GT+G+L+ AK + + A LA  F   T                 
Sbjct: 219 SSYAASVRPGIVHRLDKGTTGLLVVAKDEHSHAHLAEQFKLHT----------------- 278

Query: 196 RITKIYRALVKGIIDTNEVLINKPIG--------IMRYPGVAKGLYVALPSGKPALSKVR 255
            I ++Y +L  G+    +  I  PIG        +   PG  +G        + A S+ +
Sbjct: 279 -IERVYVSLTTGVPSPPQGRIEIPIGRDSSNRIRMAAIPGGVRG-----GRARHAASRYK 338

Query: 256 VLERDMEKNQTLVQVQIQSGRPHQIRIHLSLIGYPLLGDPLYVAGGQPECFDSELVEEEF 315
           V+E        LV+ ++++GR HQIR H   +G PLLGD +Y  GG      S L +   
Sbjct: 339 VIETFAGGGSALVEWRLETGRTHQIRAHAKYMGVPLLGDEVY--GGTKSMALSLLQKRVS 398

Query: 316 AEDGG-----YQRPTKPVPGDCGYHLHAHEVTLSHPTTNAVMKIIAPLP 352
             D         R  +P        LHA  +  +HP T  ++K   P P
Sbjct: 399 RSDQEEIIELISRMDRPC-------LHAIVLGFTHPCTGEIVKFSCPPP 415

The following BLAST results are available for this feature:
BLAST of Spo02998.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902187802|gb|KNA10992.1|7.2e-20899.4hypothetical protein SOVF_1392... [more]
gi|731318303|ref|XP_010669646.1|2.8e-17584.2PREDICTED: RNA pseudouridine s... [more]
gi|731412594|ref|XP_010658419.1|1.2e-14971.0PREDICTED: RNA pseudouridine s... [more]
gi|1012247377|ref|XP_015942620.1|3.2e-14771.5PREDICTED: RNA pseudouridine s... [more]
gi|1021566500|ref|XP_016174500.1|3.5e-14670.9PREDICTED: RNA pseudouridine s... [more]
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BLAST of Spo02998.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QUM3_SPIOL5.0e-20899.4Uncharacterized protein OS=Spi... [more]
A0A0J8D0M1_BETVU1.9e-17584.2Uncharacterized protein OS=Bet... [more]
G7I9K6_MEDTR7.1e-14669.1Pseudouridine synthase Rlu fam... [more]
A0A151U5V2_CAJCA2.1e-14569.7RNA pseudourine synthase 5 OS=... [more]
A0A0B2P011_GLYSO1.0e-14468.8Pseudouridine synthase OS=Glyc... [more]
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BLAST of Spo02998.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PUS5_ARATH1.9e-13666.7RNA pseudouridine synthase 5 O... [more]
PUS5_ORYSJ1.0e-12460.6RNA pseudouridine synthase 5 O... [more]
Y1592_SYNY31.3e-4738.6Uncharacterized RNA pseudourid... [more]
RLUD_PSEAE2.2e-3133.0Ribosomal large subunit pseudo... [more]
Y1758_AQUAE1.6e-2632.9Uncharacterized RNA pseudourid... [more]
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BLAST of Spo02998.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4
Match NameE-valueIdentityDescription
AT3G52260.32.0e-12357.2Pseudouridine synthase family ... [more]
AT5G51140.27.6e-1425.9Pseudouridine synthase family ... [more]
AT3G19440.15.4e-1229.0Pseudouridine synthase family ... [more]
AT1G76050.27.1e-1227.9Pseudouridine synthase family ... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006145Pseudouridine synthase, RsuA/RluB/C/D/E/FPFAMPF00849PseudoU_synth_2coord: 100..277
score: 1.8
IPR020103Pseudouridine synthase, catalytic domainunknownSSF55120Pseudouridine synthasecoord: 86..355
score: 7.2
NoneNo IPR availablePANTHERPTHR11079CYTOSINE DEAMINASEcoord: 197..357
score: 7.3E-103coord: 29..178
score: 7.3E
NoneNo IPR availablePANTHERPTHR11079:SF98PROTEIN ZK287.7coord: 197..357
score: 7.3E-103coord: 29..178
score: 7.3E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0001522 pseudouridine synthesis
biological_process GO:0043087 regulation of GTPase activity
biological_process GO:0009451 RNA modification
biological_process GO:0055085 transmembrane transport
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0043547 positive regulation of GTPase activity
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005634 nucleus
molecular_function GO:0005524 ATP binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0005096 GTPase activator activity
molecular_function GO:0009982 pseudouridine synthase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0004674 protein serine/threonine kinase activity
RNA-Seq Expression