Spo03006 (gene)

Overview
NameSpo03006
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionTransmembrane protein, putative
Locationchr1 : 30298920 .. 30303538 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GATTTGCAGAGAGGAGAGAGAAATTTGGGCAAAAATGGCGAGAATTGGAGTTGCCTATTTGATCCGTTCTCAAGCAACTCAGCTCATTTCCAGAAACGTTTCTTCAGGTGCACATTTTTTTTCCCCATATAAACTTATGCCTTTTGCTTCAAATACTAGAAATGTCCTCAGTTTTTTTGAAAGTTTGGTTTGAATCCTATAAATTTCTTCGTAATACAGAAATCAGAACCTTTATGAAGTATCCAGTTCATTTTTTTTATATGAGATGTTGGATGTATCGTAGTTTTTATGTGGAAATGAATTAGGTTAGGTTAAGGGTGCTACAAATTGGAAGATAGTTTGAGTTTGTTTAATTTAATGCTTAAAGAACGATTAGCAATGATGGAAATGCTACTTTGAATTGTTACTGTGTGATATTGATATAGTTATGTAGTTACTTGTATAATTAGAAAATGGTGCAATTTCTCATTTTTTGGGGGTGTTGTCTAGCCCTTATTCTTCGGACTCGGATAGACATATTATTGGATTCCTAAAGCGAAATATTTGTGAGGTCTCTTAGACTTTTCATGGTTGAGAATAGATTTGAATGGAAAGGGAATTTAATTATAGCTTGGCATTGCTTAGGGTTTGAGGTAATTCGAAGACGAAATGTTTGTAGATGTGAGCGAGATGAATTCAGGAAGATTGNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGACTGTATTAGGCCAAAGGGTTCTATTATGTGATTTCTGTCTTAATTTAGTAGATATGCTTTTGAAAATGATAACTGAGGATATTTTAATGACTATGTTGTGGTTGTTTATGTCAAGCCATACCTTGTTGGAAAGAGTTGAAGTTTGGTAAATGGTTTGGTGATCACTAAAGTCTGGAATTTGTTTTCTGCGGAGAATTTTTTTTAGAGGAACTAGAATCAGTTTTTGTTCCCCAAATTGTGGGTCAACATTGAATGGAAATTGCTAATCTTCCATTTTGGGTGTTACTGTGTTAGATATATGATTAATTTTCATTCCATCCTGATTGGAATGTAAAGAGTAATTTATACTTCCCTTAATGTGCCTAGGTGAACCTTGTTTAGCATATGTTCACTTATTCTGGATATATCTCATAAACCATTGTTGATAGTTGAGGGGGTAAGCTCCTCTAACTTGGACCAGTTGCACTTATAAGCGCAACCTAAAACTTTGAACCAGTTGCATTTTTTGAGCTCTCTTCTTTGTGTGAGAATACTTGATGATTTAAATGAGTGAGAATATGAGGGCTAAGATCCTTTTATTGAGTGGAAGTTTAACTTGTTTGATCCTCTCATGATTGGCGGTCTATTGGACCCTTTTCAGTTCTCCTATTACTTTGTTGTAACATTCTTTGATTCTTTCTATTTTGTCATTCTCTTCATTCGTCTTTTACTTTACTGCTGGCTGTTGATGTAGGAAAGTCTTTGTAATCAACTTCGTTTGTTGGTTCTCATGTTGATTAGCCTTGCTGGATTACCATACTCTTCCTTTATTGACGGGAGACTTGAAGAATTAAAACGATGATAAAAATAATTTCTTTTTAGAGAGAAAGATTCATGCTCATCAAAGATGGCCTTCTTTATGCACTTACTTTTTGCACTTTTTCCAGGATCTTTTGAGGTGGTGAATTGGTGATAATTTTAATACTTAGACGTCTCTTCTAGGTAGTTTAACTAGTACATTTGATGGTTCAATATTGCCCTCTTCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGGGATGTTCAGAAAAATGGGAGGTTGGATACCTAACTCTGGTAGAAGACTTCTTATTTTTTGTTGGACTTTGTTGTAGAGAGTGGAATAGACACAACGAAGATAATATACTTGTGTAGTAAATTGTAGGTGAACTGGAGCCAAACTGCATGCAGCTTTACCTCCACGTTAGCCAAAGAAATTCCTTATTTCGTTCTTTCCTTCCTGCTTCTTCCTTTACAAATTTGTAAGGATAAGTTCTCTTTTCGGTGATACTAGCTTTGACTGCCTCTAAAAGGCATGAGGTCCATAGATTTCAGACTTTGTTCACATACTTGGCTCACATACTTAGGGATGTGAGAAGAACCAGCTGGCCACAACAGATAAATAAGATTGAGACAGCAAATAAGAAAAGAACTGGAGGATTTTGATAAATGAATACTCAAGAACAGATTACAAAAGTAGTAGCTTGAGGCTACAAGTCTCCAAGTCAGTAGCTTTAGGCTACAAATCTCTATTCCTAACACCAAAATTCCATGCCTTTCTCTTTCCTATCTTCTTCTATTGATGCACTAGGGTTGTCCAGTACAGTGCCTTTAATTAATGTGCTCCTGCTCTTCTTTGTCTTCTAGTTGGTTAAAGGCTCTTCTCACCAGCCCCTGCTAGACTTGTGGTGTTGATGTGGGTGTTTACCCTACTTCTTGCATCTGTTGTAATGACAGTACAGTGCTCAGTGCTCTGGTGGTCCATGACACTTGATTTATTACAGGATGCTGTTAAATGTGAAAAGGTGTACATGATAGGGAGTAAGTGCGGGTTGATGTGGAGAGAAATGGAAAAGTTAATTTCAATTGCAAGTATAAACAGTTGTTTGGGACAACCCAAAATATTACAGTAAAACTGTAAAAGGATAGGAAGGAGTATATTGAATGCCCCCCTTGTTCAAAAGAAACATCTCCTGAGAATTTGCTCAGATATTGCTTTTTCGTTAAAGATTGTTGGAAATGATTTCCCAATTGCCTTTTAGCCACCCCTTTCTTTGGATTTTAAAGGTAAAAAAGGTCAATACTGTTGGCATCATAGAACAGAATGTCACGGAAGGGGGAAAATAGGCAAGTGTGGTCCAACCTAGGCCTAAGCATTTTGGCCTAACTGTCTCTCCATTTAAAAATTAGTGAATGTTATCAGTATATTATCAGAACTTTAGCCCTGTCCTGACTATGTATGCAATGAATCACCTGTTTTATTCGTAATAACATAGAAACTTACTGTTCATGATGAGACAAAATAGATTGAGCTGCTTCAAAGATAATGTGTTGACTCTATATACTCATCTTTTTAATGGGTGCATACTTTGTTACTGATTAGCTCGAGATTATGAGAATTATTTGGATGCACATCATATCCGTGACATATTTTTGTGACAATCTTCCTACCATTGTAGGATATGTTTTATGCAAGTCTTTCTATAGTCTTTTTGGTATTTGGTGTTGCATATTCTCATTTGTTAATCCACCATTTTCAGGTTACAACAGCTTTAGGTCAGAAGCACCGAGATTATACCCAAACACCGAATTATATTGTAGCTCTTCTATTCTGACTACTATCCAGAAGAGGTGGGCTTCTCACAGCCCTAAAACACAAGATGAAAGCAAGATTAGCATTGGACCGCGTAAAGGGCTAGAAGCTGGTGAAGATGGCAAGGATATTGGGGTAGCCTATTATGGTCCGATCTCATCTACTATCAGGAAAGTCAAGCTCCTCTCTCTCTCCACCTGCTGTTTATCCGTATCTCTGGGTCCTGTGATAACCTTTATGACATCCCCTGAGATGAATGTGATATTGAAAGGTGGTGTTGCATCTACTGTTATGTTCCTAAGTGCTACTACCACTGCTGCCCTTCATTGGTTTGTGAGCCCTTACATTCATAAGATCAGGTGGCAACCCGGTTCTGATACCTTTGAGGCAGAAATGATGTCGTGGTTGGCTACCCCATTAACCAAGACTGTCAAATTCGCTGATATAAGGATTGCAGAGACCAACAGGCCATACGTGTCGTTCAAAGCTAATGAAACATTCTATTACGTGGATCCAGACCACTGTCCAAACAAAGCTTTGCTTGCTAAATTGACTCCCCACAAATCTGCTAATGAATCAGCCTTCAAGAACTTGTGATTGAAAACTGTCCCAACAGTGATTTTGCAGATTATTTTCTACGTAAGTTGGTTTCTTTGAGCAATACTTAGTCTACAATAACCTTTTAAGTGAGTTAAACATCGCCAAATCAGCGGTAAAGCATACTGTGTTGAGATTTTGGGATTTTATCATTGAATAAATGTGTTTGTATTCTTCAAGTTTTTTGTTTATATTGATGTATGATGCTTAAAAGTGCATGAAATTTCTCCGAATTTGCAATGAGCAGATGCAGATGCTATTCCATGAGAAAACATTAATAATTTTTATTTTATTTTTCGCTTTTATCCGTCCCTCCTTGAGTCCTTACTTGCCCTTTTGTCACTGCCCACACCGAAAAGTGGGCAAAGCTTAATACATCAACAGCATATGCTCATAAAATACATTACCAGATTATGATAGGGTGCTATGATACTATGAAGCAGACCAGAATCGGTAAAGACTGAGAAAGTCAAAACCCCCAATATATGAACTTCAAATTTCAATCCAGATATTAGGAAGCTTTAAGAATTAGAACTTGGTACATTTTGGTTTGCCGATGAAAGTTAGGAAAATATAATTGAGAATTAACCAGCACTTCCCCC

mRNA sequence

GATTTGCAGAGAGGAGAGAGAAATTTGGGCAAAAATGGCGAGAATTGGAGTTGCCTATTTGATCCGTTCTCAAGCAACTCAGCTCATTTCCAGAAACGTTTCTTCAGGTTACAACAGCTTTAGGTCAGAAGCACCGAGATTATACCCAAACACCGAATTATATTGTAGCTCTTCTATTCTGACTACTATCCAGAAGAGGTGGGCTTCTCACAGCCCTAAAACACAAGATGAAAGCAAGATTAGCATTGGACCGCGTAAAGGGCTAGAAGCTGGTGAAGATGGCAAGGATATTGGGGTAGCCTATTATGGTCCGATCTCATCTACTATCAGGAAAGTCAAGCTCCTCTCTCTCTCCACCTGCTGTTTATCCGTATCTCTGGGTCCTGTGATAACCTTTATGACATCCCCTGAGATGAATGTGATATTGAAAGGTGGTGTTGCATCTACTGTTATGTTCCTAAGTGCTACTACCACTGCTGCCCTTCATTGGTTTGTGAGCCCTTACATTCATAAGATCAGGTGGCAACCCGGTTCTGATACCTTTGAGGCAGAAATGATGTCGTGGTTGGCTACCCCATTAACCAAGACTGTCAAATTCGCTGATATAAGGATTGCAGAGACCAACAGGCCATACGTGTCGTTCAAAGCTAATGAAACATTCTATTACGTGGATCCAGACCACTGTCCAAACAAAGCTTTGCTTGCTAAATTGACTCCCCACAAATCTGCTAATGAATCAGCCTTCAAGAACTTGTGATTGAAAACTGTCCCAACAGTGATTTTGCAGATTATTTTCTACGTAAGTTGGTTTCTTTGAGCAATACTTAGTCTACAATAACCTTTTAAGTGAGTTAAACATCGCCAAATCAGCGGTAAAGCATACTGTGTTGAGATTTTGGGATTTTATCATTGAATAAATGTGTTTGTATTCTTCAAGTTTTTTGTTTATATTGATGTATGATGCTTAAAAGTGCATGAAATTTCTCCGAATTTGCAATGAGCAGATGCAGATGCTATTCCATGAGAAAACATTAATAATTTTTATTTTATTTTTCGCTTTTATCCGTCCCTCCTTGAGTCCTTACTTGCCCTTTTGTCACTGCCCACACCGAAAAGTGGGCAAAGCTTAATACATCAACAGCATATGCTCATAAAATACATTACCAGATTATGATAGGGTGCTATGATACTATGAAGCAGACCAGAATCGGTAAAGACTGAGAAAGTCAAAACCCCCAATATATGAACTTCAAATTTCAATCCAGATATTAGGAAGCTTTAAGAATTAGAACTTGGTACATTTTGGTTTGCCGATGAAAGTTAGGAAAATATAATTGAGAATTAACCAGCACTTCCCCC

Coding sequence (CDS)

ATGGCGAGAATTGGAGTTGCCTATTTGATCCGTTCTCAAGCAACTCAGCTCATTTCCAGAAACGTTTCTTCAGGTTACAACAGCTTTAGGTCAGAAGCACCGAGATTATACCCAAACACCGAATTATATTGTAGCTCTTCTATTCTGACTACTATCCAGAAGAGGTGGGCTTCTCACAGCCCTAAAACACAAGATGAAAGCAAGATTAGCATTGGACCGCGTAAAGGGCTAGAAGCTGGTGAAGATGGCAAGGATATTGGGGTAGCCTATTATGGTCCGATCTCATCTACTATCAGGAAAGTCAAGCTCCTCTCTCTCTCCACCTGCTGTTTATCCGTATCTCTGGGTCCTGTGATAACCTTTATGACATCCCCTGAGATGAATGTGATATTGAAAGGTGGTGTTGCATCTACTGTTATGTTCCTAAGTGCTACTACCACTGCTGCCCTTCATTGGTTTGTGAGCCCTTACATTCATAAGATCAGGTGGCAACCCGGTTCTGATACCTTTGAGGCAGAAATGATGTCGTGGTTGGCTACCCCATTAACCAAGACTGTCAAATTCGCTGATATAAGGATTGCAGAGACCAACAGGCCATACGTGTCGTTCAAAGCTAATGAAACATTCTATTACGTGGATCCAGACCACTGTCCAAACAAAGCTTTGCTTGCTAAATTGACTCCCCACAAATCTGCTAATGAATCAGCCTTCAAGAACTTGTGA

Protein sequence

MARIGVAYLIRSQATQLISRNVSSGYNSFRSEAPRLYPNTELYCSSSILTTIQKRWASHSPKTQDESKISIGPRKGLEAGEDGKDIGVAYYGPISSTIRKVKLLSLSTCCLSVSLGPVITFMTSPEMNVILKGGVASTVMFLSATTTAALHWFVSPYIHKIRWQPGSDTFEAEMMSWLATPLTKTVKFADIRIAETNRPYVSFKANETFYYVDPDHCPNKALLAKLTPHKSANESAFKNL
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo03006.1Spo03006.1mRNA


Homology
[Close]
BLAST of Spo03006.1 vs. NCBI nr
Match: gi|902142453|gb|KNA04774.1| (hypothetical protein SOVF_196610 [Spinacia oleracea])

HSP 1 Score: 478.4 bits (1230), Expect = 7.300e-132
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 1 

		  

Query: 1   MARIGVAYLIRSQATQLISRNVSSGYNSFRSEAPRLYPNTELYCSSSILTTIQKRWASHS 60
           MARIGVAYLIRSQATQLISRNVSSGYNSFRSEAPRLYPNTELYCSSSILTTIQKRWASHS
Sbjct: 1   MARIGVAYLIRSQATQLISRNVSSGYNSFRSEAPRLYPNTELYCSSSILTTIQKRWASHS 60

Query: 61  PKTQDESKISIGPRKGLEAGEDGKDIGVAYYGPISSTIRKVKLLSLSTCCLSVSLGPVIT 120
           PKTQDESKISIGPRKGLEAGEDGKDIGVAYYGPISSTIRKVKLLSLSTCCLSVSLGPVIT
Sbjct: 61  PKTQDESKISIGPRKGLEAGEDGKDIGVAYYGPISSTIRKVKLLSLSTCCLSVSLGPVIT 120

Query: 121 FMTSPEMNVILKGGVASTVMFLSATTTAALHWFVSPYIHKIRWQPGSDTFEAEMMSWLAT 180
           FMTSPEMNVILKGGVASTVMFLSATTTAALHWFVSPYIHKIRWQPGSDTFEAEMMSWLAT
Sbjct: 121 FMTSPEMNVILKGGVASTVMFLSATTTAALHWFVSPYIHKIRWQPGSDTFEAEMMSWLAT 180

Query: 181 PLTKTVKFADIRIAETNRPYVSFKANETFYYVDPDHCPNKALLAKLTPHKSANESAFKNL 240
           PLTKTVKFADIRIAETNRPYVSFKANETFYYVDPDHCPNKALLAKLTPHKSANESAFKNL
Sbjct: 181 PLTKTVKFADIRIAETNRPYVSFKANETFYYVDPDHCPNKALLAKLTPHKSANESAFKNL 240
[Close]
BLAST of Spo03006.1 vs. NCBI nr
Match: gi|731318321|ref|XP_010669656.1| (PREDICTED: uncharacterized protein LOC104886829 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 386.7 bits (992), Expect = 2.900e-104
Identity = 194/241 (80.50%), Postives = 219/241 (90.87%), Query Frame = 1 

		  

Query: 1   MARIGVAYLIRSQATQLISRNV-SSGYNSFRSEAPRLYPNTELYCSSSILTTIQKRWASH 60
           MARI V + IR +A  LISR++ SSGY+SFRSEAPRL+ + E Y +SSILT+ QKRWASH
Sbjct: 1   MARIAVTHFIRCRANHLISRSLSSSGYSSFRSEAPRLHSSIETYYNSSILTSCQKRWASH 60

Query: 61  SPKTQDESKISIGPRKGLEAGEDGKDIGVAYYGPISSTIRKVKLLSLSTCCLSVSLGPVI 120
           SPKTQD+SKISIGP K ++AGE+ KD  VAYYGPISSTI+KVKLLSLSTCCLSVSLGPVI
Sbjct: 61  SPKTQDDSKISIGPSKVVDAGEEEKDPRVAYYGPISSTIKKVKLLSLSTCCLSVSLGPVI 120

Query: 121 TFMTSPEMNVILKGGVASTVMFLSATTTAALHWFVSPYIHKIRWQPGSDTFEAEMMSWLA 180
           TFMTSP+MNVILKGGVA++V+F SA+TTA LHWFVSPYIHKIRWQPGSDTFEAEMMSWLA
Sbjct: 121 TFMTSPDMNVILKGGVAASVIFFSASTTAILHWFVSPYIHKIRWQPGSDTFEAEMMSWLA 180

Query: 181 TPLTKTVKFADIRIAETNRPYVSFKANETFYYVDPDHCPNKALLAKLTPHKSANESAFKN 240
           TPLTKT++FADIRIAETNRP+V+FKANETFY+VD DHCPNKALLAKLTP KSA+ESA KN
Sbjct: 181 TPLTKTIRFADIRIAETNRPFVTFKANETFYFVDSDHCPNKALLAKLTPQKSAHESALKN 240
[Close]
BLAST of Spo03006.1 vs. NCBI nr
Match: gi|731318319|ref|XP_010669655.1| (PREDICTED: uncharacterized protein LOC104886829 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 386.0 bits (990), Expect = 4.900e-104
Identity = 194/243 (79.84%), Postives = 219/243 (90.12%), Query Frame = 1 

		  

Query: 1   MARIGVAYLIRSQATQLISRNVSS---GYNSFRSEAPRLYPNTELYCSSSILTTIQKRWA 60
           MARI V + IR +A  LISR++SS   GY+SFRSEAPRL+ + E Y +SSILT+ QKRWA
Sbjct: 1   MARIAVTHFIRCRANHLISRSLSSSVSGYSSFRSEAPRLHSSIETYYNSSILTSCQKRWA 60

Query: 61  SHSPKTQDESKISIGPRKGLEAGEDGKDIGVAYYGPISSTIRKVKLLSLSTCCLSVSLGP 120
           SHSPKTQD+SKISIGP K ++AGE+ KD  VAYYGPISSTI+KVKLLSLSTCCLSVSLGP
Sbjct: 61  SHSPKTQDDSKISIGPSKVVDAGEEEKDPRVAYYGPISSTIKKVKLLSLSTCCLSVSLGP 120

Query: 121 VITFMTSPEMNVILKGGVASTVMFLSATTTAALHWFVSPYIHKIRWQPGSDTFEAEMMSW 180
           VITFMTSP+MNVILKGGVA++V+F SA+TTA LHWFVSPYIHKIRWQPGSDTFEAEMMSW
Sbjct: 121 VITFMTSPDMNVILKGGVAASVIFFSASTTAILHWFVSPYIHKIRWQPGSDTFEAEMMSW 180

Query: 181 LATPLTKTVKFADIRIAETNRPYVSFKANETFYYVDPDHCPNKALLAKLTPHKSANESAF 240
           LATPLTKT++FADIRIAETNRP+V+FKANETFY+VD DHCPNKALLAKLTP KSA+ESA 
Sbjct: 181 LATPLTKTIRFADIRIAETNRPFVTFKANETFYFVDSDHCPNKALLAKLTPQKSAHESAL 240
[Close]
BLAST of Spo03006.1 vs. NCBI nr
Match: gi|596001934|ref|XP_007218215.1| (hypothetical protein PRUPE_ppa010662mg [Prunus persica])

HSP 1 Score: 328.6 bits (841), Expect = 9.400e-87
Identity = 166/241 (68.88%), Postives = 196/241 (81.33%), Query Frame = 1 

		  

Query: 1   MARIGVAYLIRSQATQLISRNVSSGYNSFRSEAPRLYPNTELYCSSSI-LTTIQKRWASH 60
           M R  + +L+RSQ+ QL S N+ SGY   RS A  L  NT+   +S   +   QKRWASH
Sbjct: 1   MTRAALFHLLRSQSKQLASSNLLSGYQPCRSGAWALGLNTKSGFNSGFDINASQKRWASH 60

Query: 61  SPKTQDESKISIGPRKGLEAGEDGKDIGVAYYGPISSTIRKVKLLSLSTCCLSVSLGPVI 120
           +   +D+ KISIGPR+G E GEDGKD GV YYGPISSTI+KVKLLSLSTCCLSVSLGPVI
Sbjct: 61  ATTKEDDGKISIGPRRGGEVGEDGKDSGVVYYGPISSTIKKVKLLSLSTCCLSVSLGPVI 120

Query: 121 TFMTSPEMNVILKGGVASTVMFLSATTTAALHWFVSPYIHKIRWQPGSDTFEAEMMSWLA 180
           TFMTSP MNVILKG VAS+V+FLSA+TTAALHWFV+PYIHK+RW+PGSD+FE EM+SWLA
Sbjct: 121 TFMTSPGMNVILKGAVASSVIFLSASTTAALHWFVTPYIHKLRWKPGSDSFEVEMLSWLA 180

Query: 181 TPLTKTVKFADIRIAETNRPYVSFKANETFYYVDPDHCPNKALLAKLTPHKSANESAFKN 240
           T + +T+KF+DIR AETNRP+V+FKAN  FY+VDPDHC NKALLA+LTP K+  ESAFKN
Sbjct: 181 TYIPRTIKFSDIRPAETNRPFVTFKANGNFYFVDPDHCHNKALLARLTPQKATQESAFKN 240
[Close]
BLAST of Spo03006.1 vs. NCBI nr
Match: gi|645255130|ref|XP_008233356.1| (PREDICTED: transmembrane protein 70 homolog, mitochondrial [Prunus mume])

HSP 1 Score: 328.2 bits (840), Expect = 1.200e-86
Identity = 166/241 (68.88%), Postives = 195/241 (80.91%), Query Frame = 1 

		  

Query: 1   MARIGVAYLIRSQATQLISRNVSSGYNSFRSEAPRLYPNTELYCSSSI-LTTIQKRWASH 60
           M R  + +L+RSQ+ QL S N  SGY   RS A  L  NT+   +S   +   QKRWASH
Sbjct: 1   MTRAALFHLLRSQSKQLASSNFLSGYQPCRSGALALGLNTKPCFNSGFDINASQKRWASH 60

Query: 61  SPKTQDESKISIGPRKGLEAGEDGKDIGVAYYGPISSTIRKVKLLSLSTCCLSVSLGPVI 120
           +   +D+ KISIGPR+G E GEDGKD GV YYGPISSTI+KVKLLSLSTCCLSVSLGPVI
Sbjct: 61  ATTKEDDGKISIGPRRGGEVGEDGKDSGVVYYGPISSTIKKVKLLSLSTCCLSVSLGPVI 120

Query: 121 TFMTSPEMNVILKGGVASTVMFLSATTTAALHWFVSPYIHKIRWQPGSDTFEAEMMSWLA 180
           TFMTSP MNVILKG VAS+V+FLSA+TTAALHWFV+PYIHK+RW+PGSD+FE EM+SWLA
Sbjct: 121 TFMTSPGMNVILKGAVASSVIFLSASTTAALHWFVTPYIHKLRWKPGSDSFEVEMLSWLA 180

Query: 181 TPLTKTVKFADIRIAETNRPYVSFKANETFYYVDPDHCPNKALLAKLTPHKSANESAFKN 240
           T + +T+KF+DIR AETNRP+V+FKAN  FY+VDPDHC NKALLA+LTP K+  ESAFKN
Sbjct: 181 TYIPRTIKFSDIRPAETNRPFVTFKANGNFYFVDPDHCHNKALLARLTPQKATQESAFKN 240
[Close]
BLAST of Spo03006.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QBX2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_196610 PE=4 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 5.100e-132
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 1 

		  

Query: 1   MARIGVAYLIRSQATQLISRNVSSGYNSFRSEAPRLYPNTELYCSSSILTTIQKRWASHS 60
           MARIGVAYLIRSQATQLISRNVSSGYNSFRSEAPRLYPNTELYCSSSILTTIQKRWASHS
Sbjct: 1   MARIGVAYLIRSQATQLISRNVSSGYNSFRSEAPRLYPNTELYCSSSILTTIQKRWASHS 60

Query: 61  PKTQDESKISIGPRKGLEAGEDGKDIGVAYYGPISSTIRKVKLLSLSTCCLSVSLGPVIT 120
           PKTQDESKISIGPRKGLEAGEDGKDIGVAYYGPISSTIRKVKLLSLSTCCLSVSLGPVIT
Sbjct: 61  PKTQDESKISIGPRKGLEAGEDGKDIGVAYYGPISSTIRKVKLLSLSTCCLSVSLGPVIT 120

Query: 121 FMTSPEMNVILKGGVASTVMFLSATTTAALHWFVSPYIHKIRWQPGSDTFEAEMMSWLAT 180
           FMTSPEMNVILKGGVASTVMFLSATTTAALHWFVSPYIHKIRWQPGSDTFEAEMMSWLAT
Sbjct: 121 FMTSPEMNVILKGGVASTVMFLSATTTAALHWFVSPYIHKIRWQPGSDTFEAEMMSWLAT 180

Query: 181 PLTKTVKFADIRIAETNRPYVSFKANETFYYVDPDHCPNKALLAKLTPHKSANESAFKNL 240
           PLTKTVKFADIRIAETNRPYVSFKANETFYYVDPDHCPNKALLAKLTPHKSANESAFKNL
Sbjct: 181 PLTKTVKFADIRIAETNRPYVSFKANETFYYVDPDHCPNKALLAKLTPHKSANESAFKNL 240
[Close]
BLAST of Spo03006.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CVR9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g036320 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 2.000e-104
Identity = 194/241 (80.50%), Postives = 219/241 (90.87%), Query Frame = 1 

		  

Query: 1   MARIGVAYLIRSQATQLISRNV-SSGYNSFRSEAPRLYPNTELYCSSSILTTIQKRWASH 60
           MARI V + IR +A  LISR++ SSGY+SFRSEAPRL+ + E Y +SSILT+ QKRWASH
Sbjct: 1   MARIAVTHFIRCRANHLISRSLSSSGYSSFRSEAPRLHSSIETYYNSSILTSCQKRWASH 60

Query: 61  SPKTQDESKISIGPRKGLEAGEDGKDIGVAYYGPISSTIRKVKLLSLSTCCLSVSLGPVI 120
           SPKTQD+SKISIGP K ++AGE+ KD  VAYYGPISSTI+KVKLLSLSTCCLSVSLGPVI
Sbjct: 61  SPKTQDDSKISIGPSKVVDAGEEEKDPRVAYYGPISSTIKKVKLLSLSTCCLSVSLGPVI 120

Query: 121 TFMTSPEMNVILKGGVASTVMFLSATTTAALHWFVSPYIHKIRWQPGSDTFEAEMMSWLA 180
           TFMTSP+MNVILKGGVA++V+F SA+TTA LHWFVSPYIHKIRWQPGSDTFEAEMMSWLA
Sbjct: 121 TFMTSPDMNVILKGGVAASVIFFSASTTAILHWFVSPYIHKIRWQPGSDTFEAEMMSWLA 180

Query: 181 TPLTKTVKFADIRIAETNRPYVSFKANETFYYVDPDHCPNKALLAKLTPHKSANESAFKN 240
           TPLTKT++FADIRIAETNRP+V+FKANETFY+VD DHCPNKALLAKLTP KSA+ESA KN
Sbjct: 181 TPLTKTIRFADIRIAETNRPFVTFKANETFYFVDSDHCPNKALLAKLTPQKSAHESALKN 240
[Close]
BLAST of Spo03006.1 vs. UniProtKB/TrEMBL
Match: M5X0G2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010662mg PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 6.500e-87
Identity = 166/241 (68.88%), Postives = 196/241 (81.33%), Query Frame = 1 

		  

Query: 1   MARIGVAYLIRSQATQLISRNVSSGYNSFRSEAPRLYPNTELYCSSSI-LTTIQKRWASH 60
           M R  + +L+RSQ+ QL S N+ SGY   RS A  L  NT+   +S   +   QKRWASH
Sbjct: 1   MTRAALFHLLRSQSKQLASSNLLSGYQPCRSGAWALGLNTKSGFNSGFDINASQKRWASH 60

Query: 61  SPKTQDESKISIGPRKGLEAGEDGKDIGVAYYGPISSTIRKVKLLSLSTCCLSVSLGPVI 120
           +   +D+ KISIGPR+G E GEDGKD GV YYGPISSTI+KVKLLSLSTCCLSVSLGPVI
Sbjct: 61  ATTKEDDGKISIGPRRGGEVGEDGKDSGVVYYGPISSTIKKVKLLSLSTCCLSVSLGPVI 120

Query: 121 TFMTSPEMNVILKGGVASTVMFLSATTTAALHWFVSPYIHKIRWQPGSDTFEAEMMSWLA 180
           TFMTSP MNVILKG VAS+V+FLSA+TTAALHWFV+PYIHK+RW+PGSD+FE EM+SWLA
Sbjct: 121 TFMTSPGMNVILKGAVASSVIFLSASTTAALHWFVTPYIHKLRWKPGSDSFEVEMLSWLA 180

Query: 181 TPLTKTVKFADIRIAETNRPYVSFKANETFYYVDPDHCPNKALLAKLTPHKSANESAFKN 240
           T + +T+KF+DIR AETNRP+V+FKAN  FY+VDPDHC NKALLA+LTP K+  ESAFKN
Sbjct: 181 TYIPRTIKFSDIRPAETNRPFVTFKANGNFYFVDPDHCHNKALLARLTPQKATQESAFKN 240
[Close]
BLAST of Spo03006.1 vs. UniProtKB/TrEMBL
Match: A0A0B0MH90_GOSAR (Transmembrane 70, mitochondrial OS=Gossypium arboreum GN=F383_21700 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 2.100e-85
Identity = 165/241 (68.46%), Postives = 195/241 (80.91%), Query Frame = 1 

		  

Query: 1   MARIGVAYLIRSQATQLISRNVSSGYN-SFRSEAPRLYPNTELYCSSSILTTIQKRWASH 60
           MAR  + +L+RSQ+ QLISRN+ SGY   F + +   Y    L  ++SI + +QKRWAS 
Sbjct: 1   MARTALFHLLRSQSKQLISRNIHSGYRFRFATLSGTQYAKPNLNYATSIFS-VQKRWASQ 60

Query: 61  SPKTQDESKISIGPRKGLEAGEDGKDIGVAYYGPISSTIRKVKLLSLSTCCLSVSLGPVI 120
           +  T+D  KISIGPRK  E  ED KD GV YYGPISSTI+KVK+LSLSTCCLSVSLGPVI
Sbjct: 61  AKTTEDGDKISIGPRKSKEDDEDEKDAGVVYYGPISSTIKKVKMLSLSTCCLSVSLGPVI 120

Query: 121 TFMTSPEMNVILKGGVASTVMFLSATTTAALHWFVSPYIHKIRWQPGSDTFEAEMMSWLA 180
           TFMTSP+MNVI+KG VAS+V+F SATTTAALHWFVSPYIHKIRWQPGSD+FE EMMSWLA
Sbjct: 121 TFMTSPDMNVIVKGAVASSVIFFSATTTAALHWFVSPYIHKIRWQPGSDSFEVEMMSWLA 180

Query: 181 TPLTKTVKFADIRIAETNRPYVSFKANETFYYVDPDHCPNKALLAKLTPHKSANESAFKN 240
           T + +T+KFADIR AETNRP+V+FKAN  FY+VD +HC NKALLA+LTP K+ +ESA KN
Sbjct: 181 TYIPRTIKFADIRPAETNRPFVTFKANGNFYFVDAEHCHNKALLARLTPQKATHESALKN 240
[Close]
BLAST of Spo03006.1 vs. UniProtKB/TrEMBL
Match: A0A0D2RB28_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G204700 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 2.700e-85
Identity = 164/241 (68.05%), Postives = 198/241 (82.16%), Query Frame = 1 

		  

Query: 1   MARIGVAYLIRSQATQLISRNVSSGYNS-FRSEAPRLYPNTELYCSSSILTTIQKRWASH 60
           MAR  + +L+RSQ+ QLISRN+ SGY   F + +   Y    L  ++SI + +QKRWAS 
Sbjct: 1   MARTALFHLLRSQSKQLISRNIHSGYRCRFATLSGTQYAKPNLNYATSIFS-VQKRWASQ 60

Query: 61  SPKTQDESKISIGPRKGLEAGEDGKDIGVAYYGPISSTIRKVKLLSLSTCCLSVSLGPVI 120
           +  T+D++KISIGPRK  E  E+ KD GV Y+GPISSTI+KVK+LSLSTCCLSVSLGPVI
Sbjct: 61  AKTTEDDNKISIGPRKSKEDDENEKDAGVVYHGPISSTIKKVKMLSLSTCCLSVSLGPVI 120

Query: 121 TFMTSPEMNVILKGGVASTVMFLSATTTAALHWFVSPYIHKIRWQPGSDTFEAEMMSWLA 180
           TFMTSP+MNVI+KG VAS+V+FLSATTTAALHWFVSPYIHKIRWQPGSD+FE EMMSWLA
Sbjct: 121 TFMTSPDMNVIVKGAVASSVIFLSATTTAALHWFVSPYIHKIRWQPGSDSFEVEMMSWLA 180

Query: 181 TPLTKTVKFADIRIAETNRPYVSFKANETFYYVDPDHCPNKALLAKLTPHKSANESAFKN 240
           T + +T+KFADIR AETNRP+V+FKAN  FY+VD +HC NKALLA+LTP K+ +ESA KN
Sbjct: 181 TYIPRTIKFADIRPAETNRPFVTFKANGNFYFVDAEHCHNKALLARLTPQKATHESALKN 240
[Close]
BLAST of Spo03006.1 vs. TAIR (Arabidopsis)
Match: AT2G35790.1 (unknown protein)

HSP 1 Score: 287.3 bits (734), Expect = 8.400e-78
Identity = 153/243 (62.96%), Postives = 183/243 (75.31%), Query Frame = 1 

		  

Query: 1   MARIGVAYLIRSQATQLISRNVSSGYNSFRSEAPRLYPNTELYCSSSILTTIQKRWASHS 60
           M R  + +L+RSQ+ +L S   +SGY+  RS A     +        + +  Q+ WAS  
Sbjct: 1   MGRSALIHLLRSQSRRLSSSTFTSGYHH-RSIAGSWSSSVNPKVRFQVPSLSQRSWASFG 60

Query: 61  PKTQ---DESKISIGPRKGLEAGEDGKDIGVAYYGPISSTIRKVKLLSLSTCCLSVSLGP 120
            KT+   DE KISIGP++  E     KD GV YYGPISSTI+KVKLLSLSTCCLSVSLGP
Sbjct: 61  AKTREDDDEHKISIGPQEKKEE----KDGGVVYYGPISSTIKKVKLLSLSTCCLSVSLGP 120

Query: 121 VITFMTSPEMNVILKGGVASTVMFLSATTTAALHWFVSPYIHKIRWQPGSDTFEAEMMSW 180
           VITFMTSP +NVI+KG VASTV+FLSA+TTAALHWFVSPY+HK+RWQPGSDTFE EMM+W
Sbjct: 121 VITFMTSPGLNVIMKGAVASTVIFLSASTTAALHWFVSPYVHKLRWQPGSDTFEVEMMTW 180

Query: 181 LATPLTKTVKFADIRIAETNRPYVSFKANETFYYVDPDHCPNKALLAKLTPHKSANESAF 240
           L T   KT+KF+DIR  +T RPYVSFKA+  FY+VD DHCPNKALLA+LTP K A++SAF
Sbjct: 181 LGTFSAKTLKFSDIRYPDTQRPYVSFKADGNFYFVDADHCPNKALLARLTPPKDAHDSAF 238
The following BLAST results are available for this feature:
BLAST of Spo03006.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902142453|gb|KNA04774.1|7.3e-132100.hypothetical protein SOVF_1966... [more]
gi|731318321|ref|XP_010669656.1|2.9e-10480.5PREDICTED: uncharacterized pro... [more]
gi|731318319|ref|XP_010669655.1|4.9e-10479.8PREDICTED: uncharacterized pro... [more]
gi|596001934|ref|XP_007218215.1|9.4e-8768.8hypothetical protein PRUPE_ppa... [more]
gi|645255130|ref|XP_008233356.1|1.2e-8668.8PREDICTED: transmembrane prote... [more]
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BLAST of Spo03006.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QBX2_SPIOL5.1e-132100.Uncharacterized protein OS=Spi... [more]
A0A0J8CVR9_BETVU2.0e-10480.5Uncharacterized protein OS=Bet... [more]
M5X0G2_PRUPE6.5e-8768.8Uncharacterized protein OS=Pru... [more]
A0A0B0MH90_GOSAR2.1e-8568.4Transmembrane 70, mitochondria... [more]
A0A0D2RB28_GOSRA2.7e-8568.0Uncharacterized protein OS=Gos... [more]
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BLAST of Spo03006.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo03006.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G35790.18.4e-7862.9unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009724TMEM70 familyPANTHERPTHR13281UNCHARACTERIZEDcoord: 4..239
score: 2.6
IPR009724TMEM70 familyPFAMPF06979TMEM70coord: 101..226
score: 3.1
NoneNo IPR availablePANTHERPTHR13281:SF0TRANSMEMBRANE PROTEIN 70, MITOCHONDRIALcoord: 4..239
score: 2.6

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0001510 RNA methylation
biological_process GO:0042545 cell wall modification
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0010731 protein glutathionylation
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process GO:0010583 response to cyclopentenone
biological_process GO:0006334 nucleosome assembly
biological_process GO:0009636 response to toxic substance
biological_process GO:0006412 translation
biological_process GO:0019852 L-ascorbic acid metabolic process
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0006508 proteolysis
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0009407 toxin catabolic process
biological_process GO:0006749 glutathione metabolic process
cellular_component GO:0005618 cell wall
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0009506 plasmodesma
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009840 chloroplastic endopeptidase Clp complex
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0000786 nucleosome
cellular_component GO:0005634 nucleus
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005840 ribosome
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0005739 mitochondrion
molecular_function GO:0045174 glutathione dehydrogenase (ascorbate) activity
molecular_function GO:0004364 glutathione transferase activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0050897 cobalt ion binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005515 protein binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo187840.86Barchart | Table
Spo217160.85Barchart | Table
Spo011830.81Barchart | Table
Spo251750.81Barchart | Table
Spo150920.81Barchart | Table
Spo238740.80Barchart | Table
Spo103000.79Barchart | Table
Spo230670.79Barchart | Table
Spo244160.79Barchart | Table
Spo007540.79Barchart | Table
Spo108630.77Barchart | Table
Spo108170.77Barchart | Table
Spo085130.77Barchart | Table
Spo030070.77Barchart | Table
Spo081980.77Barchart | Table
Spo184070.76Barchart | Table
Spo182200.76Barchart | Table
Spo232980.76Barchart | Table
Spo005380.75Barchart | Table
Spo113360.75Barchart | Table
Spo019670.75Barchart | Table
Spo065080.75Barchart | Table
Spo165590.75Barchart | Table
Spo126990.74Barchart | Table
Spo194070.74Barchart | Table
Spo067110.74Barchart | Table
Spo128770.73Barchart | Table
Spo259950.73Barchart | Table
Spo116820.73Barchart | Table
Spo239210.73Barchart | Table
Spo032130.73Barchart | Table
Spo250030.73Barchart | Table
Spo043870.72Barchart | Table
Spo159340.72Barchart | Table
Spo029310.72Barchart | Table
Spo061010.72Barchart | Table
Spo192310.72Barchart | Table
Spo073150.72Barchart | Table
Spo174710.71Barchart | Table
Spo193050.71Barchart | Table
Spo070200.71Barchart | Table
Spo249160.71Barchart | Table
Spo176190.71Barchart | Table
Spo063410.71Barchart | Table
Spo152440.71Barchart | Table
Spo280410.71Barchart | Table
Spo130610.70Barchart | Table
Spo057080.70Barchart | Table
Spo084970.70Barchart | Table
Spo094600.70Barchart | Table
Spo134280.70Barchart | Table
Spo249360.70Barchart | Table
Spo254250.70Barchart | Table
Spo233960.69Barchart | Table
Spo060970.69Barchart | Table
Spo108200.69Barchart | Table
Spo104500.69Barchart | Table
Spo093210.69Barchart | Table
Spo249370.69Barchart | Table
Spo043710.69Barchart | Table
Spo244200.69Barchart | Table
Spo171510.69Barchart | Table
Spo048260.69Barchart | Table
Spo004440.68Barchart | Table
Spo181430.68Barchart | Table
Spo162250.68Barchart | Table
Spo024030.68Barchart | Table
Spo119950.68Barchart | Table
Spo168350.68Barchart | Table
Spo272360.68Barchart | Table
Spo255030.68Barchart | Table
Spo029930.68Barchart | Table
Spo030080.68Barchart | Table
Spo116260.67Barchart | Table
Spo138770.67Barchart | Table
Spo079690.67Barchart | Table
Spo067170.67Barchart | Table
Spo064970.67Barchart | Table
Spo063800.67Barchart | Table
Spo062770.67Barchart | Table
Spo202350.67Barchart | Table
Spo206940.67Barchart | Table
Spo058100.67Barchart | Table
Spo230920.67Barchart | Table
Spo242030.67Barchart | Table
Spo020490.67Barchart | Table
Spo214060.66Barchart | Table
Spo249050.66Barchart | Table
Spo069060.66Barchart | Table
Spo163920.66Barchart | Table
Spo163780.66Barchart | Table
Spo157900.66Barchart | Table
Spo153430.66Barchart | Table
Spo127350.66Barchart | Table
Spo075490.66Barchart | Table
Spo102110.66Barchart | Table
Spo237090.66Barchart | Table
Spo237130.66Barchart | Table
Spo173730.66Barchart | Table
Spo123790.66Barchart | Table
Spo242740.66Barchart | Table
Spo044970.66Barchart | Table
Spo170800.66Barchart | Table
Spo222750.65Barchart | Table
Spo196580.65Barchart | Table
Spo134870.65Barchart | Table
Spo049590.65Barchart | Table
Spo078530.65Barchart | Table
Spo089140.65Barchart | Table
Spo206050.65Barchart | Table
Spo049140.65Barchart | Table