Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTGATAACTTGATGGATAAAGTCACCTCATTGGGTGAGCGCCTAAAGATCGGTGGGATTGAGGTTGGTAAGAAAATGAGTGCTGGTGTGAGATCGATGGGTGACAAGATGAAGGAATTATTCCAAGGGCTGAATCAGACGGATAAGATTGTTGAGGAGGCCACTGTAGAGACCCTCGAGGAGCCAGATTGGGCCACGAATCTGGAGATATGTGACATGGTTAATCAAGAGAGAGTCAATAGTATTGACTTGATTCGAGGGAAAAAGAAGCGGATTATGTTAAAGACCCATAGGGTTCAGTATTTGTCTATGGTGTTGCTCGAAACTGTTGTTAAGAACTGCGAAAAAGACTTCTCTAAGGTGGCGTCTGAGAGGGTTCTTGATGAGATGGTGAAGTTGATTGATGACCCTCAAACTGTGATTATGAACAGGAACAAGGCACTTATGTTAATTGAATCCCGGGGGGAATCTTCAAACGAACTCAGATACTTGCCTGTATTTGAAGAAACATATAAGGTATGTCTATTTTATAAGATGCATATTCATCTTCCTTCTTTTTTTGAGATGACCAGAATGATAATTTTTTGTACTCGTATATTTCCATCTTTTGCTTACTGGTAATTTATCAAGTAAATGTTATTTGGAATGAGCAGATATTTTGGTATCCTTTTTTCATCTTTCTAACGTGTTATTCTTTAATTCTTTAACTTAATAGAGCTTGAGATCGAGAGGAATCCGATTCCCAGGACGTGATGATGAGAGTTTGGCACCTGTTTTTACCCCTCCTTGCTCTGTCCTTGAAGCAGATGTGAATGCACCTCTTGCACAGCCTGATATTCCAGTACAAAGCTTCTCAGAAGAAGACACAAAAGAAGCATTTAATGTCGCACGGAATTGCATTGAGCTTTCTTTCAACCGTTCTATCTTCTTCTCCCGAACAAGATGTGCTGCAGGTATCCAAACTTAATATATCAGTTACTCTTGTCTAGAATTAAGTGATATGATCTTAGCTTAACTGTTGGATCATTAGATGTCCCTTTACAGACAAGACTCGTGTTAGATTAATGTACTTAATTGAGTATATGCATAACCTGCTCGGCGATGCTACGTTTCAGATTTATTAGATACACGTTAGCTTTTAGTGATAATATATTTTAGTTTAATATTTGGTTTTTTTGCCAAAAAGGACCTTTTATAAACGTTTTTTTGTGAGAAAGGACCTTTTATGACGAAATTGGTGAAATGGGACCTAATACATAATTTTTTTTGTTGATTTGGACTTTTTACCGGTTTCTTGGAGTTGACCCAAGATTCCGGCAACGACTTTGACACGTGGCAACCGGAGAAGGCCACGTGTCCATTTAATGATTAAAAAAAAAAAAATCCCCCCCAAAAAAAAAAATTATCGATTTTTTTTTTTTTTTTTGCCCCAAATCGATTTTTTTTTTACCCCAAATCGAAATTGATTTTTTTGCCCCAAATCGATATTTTTTTTTTGCCCCAAATCGATTTTTTTTGCTCCAATTCTCCCTCCAAAATCCCAATTGCCTTAAAGTTCGTCACTGAAATTGTCTACCACGAATTGTTATTCATAGCCACACGAATGAGGTTTGCTAGTTTCCCCCCTCAATTGTTCTAATTTTGCGTCGAAAAAATTAGGGTTCTTCGCAAAATTGGGGCATAAAAAAAGAAATTCGATTTGGGGCCACAAAAAAAAAAAATATCGAATTTTTTTTTTTAGGCTTTTTTTTTTTGGGCAAATTTTTTTTTAATCATTAAATGGACTCGTGGCACTCTCCGGTTGCCACGTGTCAAAGTCGTTGCCTGAATCTTGGGTCAACTCCAAAAAACCGGTAAAAGGTCCCAATCAACAAAAAATTTTATGTTTTAGGTCCCATTTCACCAATTTCGTCATAAAAGGTCCTTTCTCGCAAAAAACCGTTTATAAAAGGTCCTTTTTGGCAAAAAATCCTTAATATTTCAGTATAAAGTGATAATTGCTTTACTTTCCAAGGTGGTTTGTGTGTTAATTACAGGTGAAAGTCCATAATTTTCATAATTTTCCATTGTTTTAATGTTTTATCAGGATGAAGACATCTATTCATATTTCGAGGCAGAGCCTCGTGTGAAACCTTTAAGGGCATCAAGAAGTGAGGTAGTAGATGGAGAAATATTGGCTTCTCCATGCATTCGTAGTGGACTTTTTCATAGTGGACTTATTGTTGAAATTGAATGTTAATTTGTATATTGTTAGTGTGAGCTAGAGGAAATAAAACTAAGACTTTCACATTTTGTATTATAACATTTCCGGTATCGGGGAGGGTCAAATTACAAAGGAAACATTGCCGAAATTTTCACCTAGTTTACTTTTATTTTTATGCTCTGAAT ATGAGTGATAACTTGATGGATAAAGTCACCTCATTGGGTGAGCGCCTAAAGATCGGTGGGATTGAGGTTGGTAAGAAAATGAGTGCTGGTGTGAGATCGATGGGTGACAAGATGAAGGAATTATTCCAAGGGCTGAATCAGACGGATAAGATTGTTGAGGAGGCCACTGTAGAGACCCTCGAGGAGCCAGATTGGGCCACGAATCTGGAGATATGTGACATGGTTAATCAAGAGAGAGTCAATAGTATTGACTTGATTCGAGGGAAAAAGAAGCGGATTATGTTAAAGACCCATAGGGTTCAGTATTTGTCTATGGTGTTGCTCGAAACTGTTGTTAAGAACTGCGAAAAAGACTTCTCTAAGGTGGCGTCTGAGAGGGTTCTTGATGAGATGGTGAAGTTGATTGATGACCCTCAAACTGTGATTATGAACAGGAACAAGGCACTTATGTTAATTGAATCCCGGGGGGAATCTTCAAACGAACTCAGATACTTGCCTGTATTTGAAGAAACATATAAGAGCTTGAGATCGAGAGGAATCCGATTCCCAGGACGTGATGATGAGAGTTTGGCACCTGTTTTTACCCCTCCTTGCTCTGTCCTTGAAGCAGATGTGAATGCACCTCTTGCACAGCCTGATATTCCAGTACAAAGCTTCTCAGAAGAAGACACAAAAGAAGCATTTAATGTCGCACGGAATTGCATTGAGCTTTCTTTCAACCGTTCTATCTTCTTCTCCCGAACAAGATGTGCTGCAGGATGAAGACATCTATTCATATTTCGAGGCAGAGCCTCGTGTGAAACCTTTAAGGGCATCAAGAAGTGAGGTAGTAGATGGAGAAATATTGGCTTCTCCATGCATTCGTAGTGGACTTTTTCATAGTGGACTTATTGTTGAAATTGAATGTTAATTTGTATATTGTTAGTGTGAGCTAGAGGAAATAAAACTAAGACTTTCACATTTTGTATTATAACATTTCCGGTATCGGGGAGGGTCAAATTACAAAGGAAACATTGCCGAAATTTTCACCTAGTTTACTTTTATTTTTATGCTCTGAAT ATGAGTGATAACTTGATGGATAAAGTCACCTCATTGGGTGAGCGCCTAAAGATCGGTGGGATTGAGGTTGGTAAGAAAATGAGTGCTGGTGTGAGATCGATGGGTGACAAGATGAAGGAATTATTCCAAGGGCTGAATCAGACGGATAAGATTGTTGAGGAGGCCACTGTAGAGACCCTCGAGGAGCCAGATTGGGCCACGAATCTGGAGATATGTGACATGGTTAATCAAGAGAGAGTCAATAGTATTGACTTGATTCGAGGGAAAAAGAAGCGGATTATGTTAAAGACCCATAGGGTTCAGTATTTGTCTATGGTGTTGCTCGAAACTGTTGTTAAGAACTGCGAAAAAGACTTCTCTAAGGTGGCGTCTGAGAGGGTTCTTGATGAGATGGTGAAGTTGATTGATGACCCTCAAACTGTGATTATGAACAGGAACAAGGCACTTATGTTAATTGAATCCCGGGGGGAATCTTCAAACGAACTCAGATACTTGCCTGTATTTGAAGAAACATATAAGAGCTTGAGATCGAGAGGAATCCGATTCCCAGGACGTGATGATGAGAGTTTGGCACCTGTTTTTACCCCTCCTTGCTCTGTCCTTGAAGCAGATGTGAATGCACCTCTTGCACAGCCTGATATTCCAGTACAAAGCTTCTCAGAAGAAGACACAAAAGAAGCATTTAATGTCGCACGGAATTGCATTGAGCTTTCTTTCAACCGTTCTATCTTCTTCTCCCGAACAAGATGTGCTGCAGGATGA MSDNLMDKVTSLGERLKIGGIEVGKKMSAGVRSMGDKMKELFQGLNQTDKIVEEATVETLEEPDWATNLEICDMVNQERVNSIDLIRGKKKRIMLKTHRVQYLSMVLLETVVKNCEKDFSKVASERVLDEMVKLIDDPQTVIMNRNKALMLIESRGESSNELRYLPVFEETYKSLRSRGIRFPGRDDESLAPVFTPPCSVLEADVNAPLAQPDIPVQSFSEEDTKEAFNVARNCIELSFNRSIFFSRTRCAAG Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo03021.1 vs. NCBI nr
Match: gi|902221700|gb|KNA18976.1| (hypothetical protein SOVF_064510 [Spinacia oleracea]) HSP 1 Score: 419.5 bits (1077), Expect = 4.300e-114 Identity = 221/237 (93.25%), Postives = 224/237 (94.51%), Query Frame = 1
BLAST of Spo03021.1 vs. NCBI nr
Match: gi|731320998|ref|XP_010671112.1| (PREDICTED: TOM1-like protein 2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 384.4 bits (986), Expect = 1.500e-103 Identity = 200/237 (84.39%), Postives = 216/237 (91.14%), Query Frame = 1
BLAST of Spo03021.1 vs. NCBI nr
Match: gi|147784756|emb|CAN70382.1| (hypothetical protein VITISV_020135 [Vitis vinifera]) HSP 1 Score: 355.1 bits (910), Expect = 9.900e-95 Identity = 183/240 (76.25%), Postives = 211/240 (87.92%), Query Frame = 1
BLAST of Spo03021.1 vs. NCBI nr
Match: gi|225461774|ref|XP_002285602.1| (PREDICTED: TOM1-like protein 2 [Vitis vinifera]) HSP 1 Score: 355.1 bits (910), Expect = 9.900e-95 Identity = 183/240 (76.25%), Postives = 211/240 (87.92%), Query Frame = 1
BLAST of Spo03021.1 vs. NCBI nr
Match: gi|747075179|ref|XP_011084615.1| (PREDICTED: TOM1-like protein 2 [Sesamum indicum]) HSP 1 Score: 354.8 bits (909), Expect = 1.300e-94 Identity = 185/240 (77.08%), Postives = 208/240 (86.67%), Query Frame = 1
BLAST of Spo03021.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RHJ4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_064510 PE=4 SV=1) HSP 1 Score: 419.5 bits (1077), Expect = 3.000e-114 Identity = 221/237 (93.25%), Postives = 224/237 (94.51%), Query Frame = 1
BLAST of Spo03021.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CSW5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g049810 PE=4 SV=1) HSP 1 Score: 384.4 bits (986), Expect = 1.100e-103 Identity = 200/237 (84.39%), Postives = 216/237 (91.14%), Query Frame = 1
BLAST of Spo03021.1 vs. UniProtKB/TrEMBL
Match: F6H1U2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g00550 PE=4 SV=1) HSP 1 Score: 355.1 bits (910), Expect = 6.900e-95 Identity = 183/240 (76.25%), Postives = 211/240 (87.92%), Query Frame = 1
BLAST of Spo03021.1 vs. UniProtKB/TrEMBL
Match: A5BNT2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020135 PE=4 SV=1) HSP 1 Score: 355.1 bits (910), Expect = 6.900e-95 Identity = 183/240 (76.25%), Postives = 211/240 (87.92%), Query Frame = 1
BLAST of Spo03021.1 vs. UniProtKB/TrEMBL
Match: A0A022RZ95_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a007671mg PE=4 SV=1) HSP 1 Score: 354.0 bits (907), Expect = 1.500e-94 Identity = 185/241 (76.76%), Postives = 213/241 (88.38%), Query Frame = 1
BLAST of Spo03021.1 vs. ExPASy Swiss-Prot
Match: TM1L2_MOUSE (TOM1-like protein 2 OS=Mus musculus GN=Tom1l2 PE=1 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 1.600e-15 Identity = 55/164 (33.54%), Postives = 91/164 (55.49%), Query Frame = 1
BLAST of Spo03021.1 vs. ExPASy Swiss-Prot
Match: TM1L2_HUMAN (TOM1-like protein 2 OS=Homo sapiens GN=TOM1L2 PE=1 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 5.900e-15 Identity = 53/164 (32.32%), Postives = 91/164 (55.49%), Query Frame = 1
BLAST of Spo03021.1 vs. ExPASy Swiss-Prot
Match: TOM1_HUMAN (Target of Myb protein 1 OS=Homo sapiens GN=TOM1 PE=1 SV=2) HSP 1 Score: 82.0 bits (201), Expect = 1.000e-14 Identity = 56/179 (31.28%), Postives = 93/179 (51.96%), Query Frame = 1
BLAST of Spo03021.1 vs. ExPASy Swiss-Prot
Match: TM1L2_XENLA (TOM1-like protein 2 OS=Xenopus laevis GN=tom1l2 PE=2 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.300e-14 Identity = 51/159 (32.08%), Postives = 88/159 (55.35%), Query Frame = 1
BLAST of Spo03021.1 vs. ExPASy Swiss-Prot
Match: TOM1_MOUSE (Target of Myb protein 1 OS=Mus musculus GN=Tom1 PE=1 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 2.200e-14 Identity = 53/159 (33.33%), Postives = 84/159 (52.83%), Query Frame = 1
BLAST of Spo03021.1 vs. TAIR (Arabidopsis)
Match: AT5G16880.1 (Target of Myb protein 1) HSP 1 Score: 334.3 bits (856), Expect = 6.300e-92 Identity = 174/246 (70.73%), Postives = 203/246 (82.52%), Query Frame = 1
BLAST of Spo03021.1 vs. TAIR (Arabidopsis)
Match: AT1G06210.1 (ENTH/VHS/GAT family protein) HSP 1 Score: 136.0 bits (341), Expect = 3.300e-32 Identity = 90/251 (35.86%), Postives = 133/251 (52.99%), Query Frame = 1
BLAST of Spo03021.1 vs. TAIR (Arabidopsis)
Match: AT4G32760.2 (ENTH/VHS/GAT family protein) HSP 1 Score: 97.8 bits (242), Expect = 1.000e-20 Identity = 72/187 (38.50%), Postives = 103/187 (55.08%), Query Frame = 1
BLAST of Spo03021.1 vs. TAIR (Arabidopsis)
Match: AT2G38410.1 (ENTH/VHS/GAT family protein) HSP 1 Score: 95.5 bits (236), Expect = 5.000e-20 Identity = 62/164 (37.80%), Postives = 97/164 (59.15%), Query Frame = 1
BLAST of Spo03021.1 vs. TAIR (Arabidopsis)
Match: AT1G21380.1 (Target of Myb protein 1) HSP 1 Score: 87.8 bits (216), Expect = 1.000e-17 Identity = 60/187 (32.09%), Postives = 93/187 (49.73%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo03021.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo03021.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo03021.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo03021.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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