Spo03024 (gene) | SpinachBase

Overview


Name	Spo03024
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Chlorophyll a-b binding protein 1, chloroplastic (Chlorophyll a-b protein 140) (CAB-140) (LHCII type I CAB-1) (Precursor)
Location	Super_scaffold_211 : 743662 .. 744465 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCCACCTCAATGGCTCTCTCTTCTCCCTCCCTTGCTGGAAAGGCCATAAAGCTCGGCCCAACCGCCTCCGAAATCCTCAGTGAGGGAAGGGTCACCATGAGGAAGACTGCCGGAAAGCCCAAGAATGTTTCATCAGGCAGCCCATGGTACGGCCCAGACCGTGTTAAATACTTGGGTCCATTCTCTGGTGAAGCCCCATCTTACCTCACTGGTGAATTCCCCGGTGACTATGGTTGGGACACTGCTGGTCTTTCCGCTGACCCTGAGACTTTTTCTAAGAACCGTGAGCTTGAGGTGATCCACTGCCGATGGGCCATGTTGGGTGCTTTGGGTTGTGTTTTCCCAGAACTCTTGGCCCGTAACGGTGTTAAGTTCGGTGAGGCTGTATGGTTCAAGGCCGGTTCACAAATCTTTAGCGAGGGCGGGCTTGACTACTTGGGTAACCCAAGTTTGGTCCATGCTCAAAGTATCCTTGCTATATGGGCTTGCCAAGTTATCTTGATGGGTGCCGTTGAGGGTTATCGTATTGCCGGTGGACCTCTCGGTGAGGTGGTGGACCCACTTTACCCCGGAGGTAGCTTTGACCCATTGGGCTTGGCTGATGACCCTGAAGCTTTCGCTGAGTTGAAGGTCAAGGAGATCAAGAATGGTAGATTGGCAATGTTTTCAATGTTCGGATTCTTTGTTCAAGCTATTGTTACAGGTAAGGGCCCATTAGAGAACCTAGCCGACCATCTTGCCGACCCAGTTAACAACAACGCTTGGTCTTTTGCCACTAACTTTGTTCCTGGCAAGTGA

mRNA sequence

ATGGCCTCCACCTCAATGGCTCTCTCTTCTCCCTCCCTTGCTGGAAAGGCCATAAAGCTCGGCCCAACCGCCTCCGAAATCCTCAGTGAGGGAAGGGTCACCATGAGGAAGACTGCCGGAAAGCCCAAGAATGTTTCATCAGGCAGCCCATGGTACGGCCCAGACCGTGTTAAATACTTGGGTCCATTCTCTGGTGAAGCCCCATCTTACCTCACTGGTGAATTCCCCGGTGACTATGGTTGGGACACTGCTGGTCTTTCCGCTGACCCTGAGACTTTTTCTAAGAACCGTGAGCTTGAGGTGATCCACTGCCGATGGGCCATGTTGGGTGCTTTGGGTTGTGTTTTCCCAGAACTCTTGGCCCGTAACGGTGTTAAGTTCGGTGAGGCTGTATGGTTCAAGGCCGGTTCACAAATCTTTAGCGAGGGCGGGCTTGACTACTTGGGTAACCCAAGTTTGGTCCATGCTCAAAGTATCCTTGCTATATGGGCTTGCCAAGTTATCTTGATGGGTGCCGTTGAGGGTTATCGTATTGCCGGTGGACCTCTCGGTGAGGTGGTGGACCCACTTTACCCCGGAGGTAGCTTTGACCCATTGGGCTTGGCTGATGACCCTGAAGCTTTCGCTGAGTTGAAGGTCAAGGAGATCAAGAATGGTAGATTGGCAATGTTTTCAATGTTCGGATTCTTTGTTCAAGCTATTGTTACAGGTAAGGGCCCATTAGAGAACCTAGCCGACCATCTTGCCGACCCAGTTAACAACAACGCTTGGTCTTTTGCCACTAACTTTGTTCCTGGCAAGTGA

Coding sequence (CDS)

ATGGCCTCCACCTCAATGGCTCTCTCTTCTCCCTCCCTTGCTGGAAAGGCCATAAAGCTCGGCCCAACCGCCTCCGAAATCCTCAGTGAGGGAAGGGTCACCATGAGGAAGACTGCCGGAAAGCCCAAGAATGTTTCATCAGGCAGCCCATGGTACGGCCCAGACCGTGTTAAATACTTGGGTCCATTCTCTGGTGAAGCCCCATCTTACCTCACTGGTGAATTCCCCGGTGACTATGGTTGGGACACTGCTGGTCTTTCCGCTGACCCTGAGACTTTTTCTAAGAACCGTGAGCTTGAGGTGATCCACTGCCGATGGGCCATGTTGGGTGCTTTGGGTTGTGTTTTCCCAGAACTCTTGGCCCGTAACGGTGTTAAGTTCGGTGAGGCTGTATGGTTCAAGGCCGGTTCACAAATCTTTAGCGAGGGCGGGCTTGACTACTTGGGTAACCCAAGTTTGGTCCATGCTCAAAGTATCCTTGCTATATGGGCTTGCCAAGTTATCTTGATGGGTGCCGTTGAGGGTTATCGTATTGCCGGTGGACCTCTCGGTGAGGTGGTGGACCCACTTTACCCCGGAGGTAGCTTTGACCCATTGGGCTTGGCTGATGACCCTGAAGCTTTCGCTGAGTTGAAGGTCAAGGAGATCAAGAATGGTAGATTGGCAATGTTTTCAATGTTCGGATTCTTTGTTCAAGCTATTGTTACAGGTAAGGGCCCATTAGAGAACCTAGCCGACCATCTTGCCGACCCAGTTAACAACAACGCTTGGTCTTTTGCCACTAACTTTGTTCCTGGCAAGTGA

Protein sequence

MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSFATNFVPGK

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo03024.1	Spo03024.1	mRNA

Homology

[Close]

BLAST of Spo03024.1 vs. NCBI nr
Match: gi|283549609|emb|CAX64458.1| (major chlorophyll a/b binding protein LHCb1.4 precursor [Spinacia oleracea])

HSP 1 Score: 548.9 bits (1413), Expect = 4.900e-153
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1

		  
Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL
Sbjct: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSFATNFVPGK 268
           LENLADHLADPVNNNAWSFATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWSFATNFVPGK 267

[Close]

BLAST of Spo03024.1 vs. NCBI nr
Match: gi|133917261|emb|CAJ77390.1| (major chlorophyll a/b binding protein LHCb1.2 [Spinacia oleracea])

HSP 1 Score: 544.7 bits (1402), Expect = 9.300e-152
Identity = 264/267 (98.88%), Postives = 266/267 (99.63%), Query Frame = 1

		  
Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MAS++MALSSPSLAGKAIKLGPTASEIL EGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPSLAGKAIKLGPTASEILGEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSFATNFVPGK 268
           LENLADHLADPVNNNAWSFATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWSFATNFVPGK 267

[Close]

BLAST of Spo03024.1 vs. NCBI nr
Match: gi|902212423|gb|KNA16961.1| (hypothetical protein SOVF_084380 [Spinacia oleracea])

HSP 1 Score: 534.6 bits (1376), Expect = 9.600e-149
Identity = 256/267 (95.88%), Postives = 263/267 (98.50%), Query Frame = 1

		  
Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MAS++MALSSPSLAGKA+KLGPTASEI+ EGR+TMRKTAGKPK V S SPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSFATNFVPGK 268
           LENLADHLADPVNNNAW+FATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWNFATNFVPGK 267

[Close]

BLAST of Spo03024.1 vs. NCBI nr
Match: gi|731373030|ref|XP_010666522.1| (PREDICTED: uncharacterized protein LOC104883672 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 533.9 bits (1374), Expect = 1.600e-148
Identity = 255/267 (95.51%), Postives = 263/267 (98.50%), Query Frame = 1

		  
Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MA+++MALSSPSLAGKA+ LGP ASEIL EGR+TMRKTAGKPK VSSGSPWYGPDRVKYL
Sbjct: 358 MATSTMALSSPSLAGKAVNLGPNASEILGEGRITMRKTAGKPKQVSSGSPWYGPDRVKYL 417

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 418 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 477

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AG
Sbjct: 478 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 537

Query: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 538 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 597

Query: 241 LENLADHLADPVNNNAWSFATNFVPGK 268
           LENLADHLADPVNNNAW+FATNFVPGK
Sbjct: 598 LENLADHLADPVNNNAWAFATNFVPGK 624

[Close]

BLAST of Spo03024.1 vs. NCBI nr
Match: gi|870842707|gb|KMS96057.1| (hypothetical protein BVRB_002570 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 533.9 bits (1374), Expect = 1.600e-148
Identity = 255/267 (95.51%), Postives = 263/267 (98.50%), Query Frame = 1

		  
Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MA+++MALSSPSLAGKA+ LGP ASEIL EGR+TMRKTAGKPK VSSGSPWYGPDRVKYL
Sbjct: 1   MATSTMALSSPSLAGKAVNLGPNASEILGEGRITMRKTAGKPKQVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSFATNFVPGK 268
           LENLADHLADPVNNNAW+FATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Spo03024.1 vs. UniProtKB/TrEMBL
Match: D2T2F7_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea GN=lhcb1.4 PE=3 SV=1)

HSP 1 Score: 548.9 bits (1413), Expect = 3.400e-153
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1

		  
Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL
Sbjct: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSFATNFVPGK 268
           LENLADHLADPVNNNAWSFATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWSFATNFVPGK 267

[Close]

BLAST of Spo03024.1 vs. UniProtKB/TrEMBL
Match: A4F3R3_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea GN=lhcb1.2 PE=3 SV=1)

HSP 1 Score: 544.7 bits (1402), Expect = 6.400e-152
Identity = 264/267 (98.88%), Postives = 266/267 (99.63%), Query Frame = 1

		  
Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MAS++MALSSPSLAGKAIKLGPTASEIL EGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPSLAGKAIKLGPTASEILGEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSFATNFVPGK 268
           LENLADHLADPVNNNAWSFATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWSFATNFVPGK 267

[Close]

BLAST of Spo03024.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RBU9_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea GN=SOVF_084380 PE=3 SV=1)

HSP 1 Score: 534.6 bits (1376), Expect = 6.700e-149
Identity = 256/267 (95.88%), Postives = 263/267 (98.50%), Query Frame = 1

		  
Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MAS++MALSSPSLAGKA+KLGPTASEI+ EGR+TMRKTAGKPK V S SPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSFATNFVPGK 268
           LENLADHLADPVNNNAW+FATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWNFATNFVPGK 267

[Close]

BLAST of Spo03024.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B8D4_BETVU (Chlorophyll a-b binding protein, chloroplastic OS=Beta vulgaris subsp. vulgaris GN=BVRB_002570 PE=3 SV=1)

HSP 1 Score: 533.9 bits (1374), Expect = 1.100e-148
Identity = 255/267 (95.51%), Postives = 263/267 (98.50%), Query Frame = 1

		  
Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MA+++MALSSPSLAGKA+ LGP ASEIL EGR+TMRKTAGKPK VSSGSPWYGPDRVKYL
Sbjct: 1   MATSTMALSSPSLAGKAVNLGPNASEILGEGRITMRKTAGKPKQVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSFATNFVPGK 268
           LENLADHLADPVNNNAW+FATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Spo03024.1 vs. UniProtKB/TrEMBL
Match: B3WFZ6_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea GN=lhcb1.3 PE=3 SV=1)

HSP 1 Score: 533.5 bits (1373), Expect = 1.500e-148
Identity = 255/267 (95.51%), Postives = 263/267 (98.50%), Query Frame = 1

		  
Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MAS++MALSSPSLAGKA+KLGPTASEI+ EGR+TMRKTAGKPK V S SPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE+PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSFATNFVPGK 268
           LENLADHLADPVNNNAW+FATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWNFATNFVPGK 267

[Close]

BLAST of Spo03024.1 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 533.5 bits (1373), Expect = 1.300e-150
Identity = 255/267 (95.51%), Postives = 263/267 (98.50%), Query Frame = 1

		  
Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MAS++MALSSPSLAGKA+KLGPTASEI+ EGR+TMRKTAGKPK V S SPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE+PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSFATNFVPGK 268
           LENLADHLADPVNNNAW+FATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWNFATNFVPGK 267

[Close]

BLAST of Spo03024.1 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1)

HSP 1 Score: 516.9 bits (1330), Expect = 1.300e-145
Identity = 245/267 (91.76%), Postives = 259/267 (97.00%), Query Frame = 1

		  
Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MA+++MALSSPS AGKA+KL P++SEI   G+VTMRKTA K K VSSGSPWYGPDRVKYL
Sbjct: 1   MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE+PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSFATNFVPGK 268
           LENLADHLADPVNNNAW++ATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPGK 267

[Close]

BLAST of Spo03024.1 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 1.100e-144
Identity = 246/267 (92.13%), Postives = 257/267 (96.25%), Query Frame = 1

		  
Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MA+++MALSS + AGKA+KL P++SEI   GRVTMRKTA K K  SSGSPWYGPDRVKYL
Sbjct: 1   MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE+PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSFATNFVPGK 268
           LENLADHLADPVNNNAW+FATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Spo03024.1 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1)

HSP 1 Score: 511.1 bits (1315), Expect = 7.100e-144
Identity = 244/267 (91.39%), Postives = 254/267 (95.13%), Query Frame = 1

		  
Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MA+ +MALSSPS AGKA+K  P++SEI   G+ TMRKT  K K VSSGSPWYGPDRVKYL
Sbjct: 1   MAAATMALSSPSFAGKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGEAPSYLTGEFPGDYGWDTA LSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSFATNFVPGK 268
           LENLADHLADPVNNNAWS+ATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWSYATNFVPGK 267

[Close]

BLAST of Spo03024.1 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1)

HSP 1 Score: 508.8 bits (1309), Expect = 3.500e-143
Identity = 243/267 (91.01%), Postives = 257/267 (96.25%), Query Frame = 1

		  
Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MA+++ ALSSP  AGKA+KL P++SE+   G+VTMRKTA K K VSSGSPWYGPDRVKYL
Sbjct: 1   MAASTTALSSP-FAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE+PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180

Query: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEVVDPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSFATNFVPGK 268
           LENLADHLADPVNNNAWS+ATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWSYATNFVPGK 266

[Close]

BLAST of Spo03024.1 vs. TAIR (Arabidopsis)
Match: AT1G29930.1 (chlorophyll A/B binding protein 1)

HSP 1 Score: 486.1 bits (1250), Expect = 1.400e-137
Identity = 236/268 (88.06%), Postives = 250/268 (93.28%), Query Frame = 1

		  
Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MA+++MALSSP+ AGKA+KL P ASE+L  GRVTMRKT  KPK   SGSPWYG DRVKYL
Sbjct: 1   MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE+PSYLTGEFPGDYGWDTAGLSADPETF++NRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 180

Query: 181 -GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
            GPLGE  D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 NGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWSFATNFVPGK 268
           P+ENLADHLADPVNNNAW+FATNFVPGK
Sbjct: 241 PIENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Spo03024.1 vs. TAIR (Arabidopsis)
Match: AT1G29920.1 (chlorophyll A/B-binding protein 2)

HSP 1 Score: 484.2 bits (1245), Expect = 5.200e-137
Identity = 235/268 (87.69%), Postives = 249/268 (92.91%), Query Frame = 1

		  
Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MA+++MALSSP+ AGKA+ L P ASE+L  GRVTMRKT  KPK   SGSPWYG DRVKYL
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE+PSYLTGEFPGDYGWDTAGLSADPETF++NRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 180

Query: 181 -GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
            GPLGE  D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 NGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWSFATNFVPGK 268
           P+ENLADHLADPVNNNAW+FATNFVPGK
Sbjct: 241 PIENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Spo03024.1 vs. TAIR (Arabidopsis)
Match: AT1G29910.1 (chlorophyll A/B binding protein 3)

HSP 1 Score: 484.2 bits (1245), Expect = 5.200e-137
Identity = 235/268 (87.69%), Postives = 249/268 (92.91%), Query Frame = 1

		  
Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MA+++MALSSP+ AGKA+ L P ASE+L  GRVTMRKT  KPK   SGSPWYG DRVKYL
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE+PSYLTGEFPGDYGWDTAGLSADPETF++NRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 180

Query: 181 -GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
            GPLGE  D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 NGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWSFATNFVPGK 268
           P+ENLADHLADPVNNNAW+FATNFVPGK
Sbjct: 241 PIENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Spo03024.1 vs. TAIR (Arabidopsis)
Match: AT2G34420.1 (photosystem II light harvesting complex gene B1B2)

HSP 1 Score: 479.6 bits (1233), Expect = 1.300e-135
Identity = 236/268 (88.06%), Postives = 248/268 (92.54%), Query Frame = 1

		  
Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MAS++MALSSP+ AGKA+K  P AS++L  GRVTMRKT  KPK   SGSPWYG DRVKYL
Sbjct: 1   MASSTMALSSPAFAGKAVK--PAASDVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE PSYLTGEFPGDYGWDTAGLSADPETF++NRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 180

Query: 181 -GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
            GPLGE  D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 DGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWSFATNFVPGK 268
           PLENLADHLADPVNNNAW+FATNFVPGK
Sbjct: 241 PLENLADHLADPVNNNAWAFATNFVPGK 265

[Close]

BLAST of Spo03024.1 vs. TAIR (Arabidopsis)
Match: AT2G34430.1 (light-harvesting chlorophyll-protein complex II subunit B1)

HSP 1 Score: 476.5 bits (1225), Expect = 1.100e-134
Identity = 234/268 (87.31%), Postives = 247/268 (92.16%), Query Frame = 1

		  
Query: 1   MASTSMALSSPSLAGKAIKLGPTASEILSEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60
           MA+++MALSSP+L GKA+KL P ASE+   GR+TMRK A KP    SGSPWYG DRVKYL
Sbjct: 1   MAASTMALSSPALTGKAVKLSPAASEVFGTGRITMRK-ASKPTG-PSGSPWYGSDRVKYL 60

Query: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHCRWAMLGALGCVFPELL 120
           GPFSGE PSYLTGEFPGDYGWDTAGLSADPETF++NRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 120

Query: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180
           ARNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 180

Query: 181 -GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
            GPLGE  D LYPGGSFDPLGLA DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 181 DGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 240

Query: 241 PLENLADHLADPVNNNAWSFATNFVPGK 268
           PLENLADHLADPVNNNAW+FATNFVPGK
Sbjct: 241 PLENLADHLADPVNNNAWAFATNFVPGK 266

The following BLAST results are available for this feature:

BLAST of Spo03024.1 vs. NCBI nr
BLAST of Spo03024.1 vs. UniProtKB/TrEMBL
BLAST of Spo03024.1 vs. ExPASy Swiss-Prot
BLAST of Spo03024.1 vs. TAIR (Arabidopsis)

BLAST of Spo03024.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|283549609\|emb\|CAX64458.1\|	4.9e-153	100.	major chlorophyll a/b binding ...	[more]
gi\|133917261\|emb\|CAJ77390.1\|	9.3e-152	98.8	major chlorophyll a/b binding ...	[more]
gi\|902212423\|gb\|KNA16961.1\|	9.6e-149	95.8	hypothetical protein SOVF_0843...	[more]
gi\|731373030\|ref\|XP_010666522.1\|	1.6e-148	95.5	PREDICTED: uncharacterized pro...	[more]
gi\|870842707\|gb\|KMS96057.1\|	1.6e-148	95.5	hypothetical protein BVRB_0025...	[more]

BLAST of Spo03024.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
D2T2F7_SPIOL	3.4e-153	100.	Chlorophyll a-b binding protei...	[more]
A4F3R3_SPIOL	6.4e-152	98.8	Chlorophyll a-b binding protei...	[more]
A0A0K9RBU9_SPIOL	6.7e-149	95.8	Chlorophyll a-b binding protei...	[more]
A0A0J8B8D4_BETVU	1.1e-148	95.5	Chlorophyll a-b binding protei...	[more]
B3WFZ6_SPIOL	1.5e-148	95.5	Chlorophyll a-b binding protei...	[more]

BLAST of Spo03024.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
CB2A_SPIOL	1.3e-150	95.5	Chlorophyll a-b binding protei...	[more]
CB24_TOBAC	1.3e-145	91.7	Chlorophyll a-b binding protei...	[more]
CB2G_SOLLC	1.1e-144	92.1	Chlorophyll a-b binding protei...	[more]
CB25_PETSP	7.1e-144	91.3	Chlorophyll a-b binding protei...	[more]
CB21_TOBAC	3.5e-143	91.0	Chlorophyll a-b binding protei...	[more]

BLAST of Spo03024.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
AT1G29930.1	1.4e-137	88.0	chlorophyll A/B binding protei...	[more]
AT1G29920.1	5.2e-137	87.6	chlorophyll A/B-binding protei...	[more]
AT1G29910.1	5.2e-137	87.6	chlorophyll A/B binding protei...	[more]
AT2G34420.1	1.3e-135	88.0	photosystem II light harvestin...	[more]
AT2G34430.1	1.1e-134	87.3	light-harvesting chlorophyll-p...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 1..267 score: 1.6E
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 67..233 score: 5.5
IPR023329	Chlorophyll a/b binding protein domain	GENE3D	1.10.3460.10		coord: 60..258 score: 7.1
IPR023329	Chlorophyll a/b binding protein domain	unknown	SSF103511	Chlorophyll a-b binding protein	coord: 50..264 score: 1.57
None	No IPR available	PANTHER	PTHR21649:SF26	CHLOROPHYLL A-B BINDING PROTEIN 1, CHLOROPLASTIC-RELATED	coord: 1..267 score: 1.6E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009765	photosynthesis, light harvesting
biological_process	GO:0007219	Notch signaling pathway
biological_process	GO:0001510	RNA methylation
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0009773	photosynthetic electron transport in photosystem I
biological_process	GO:0035304	regulation of protein dephosphorylation
biological_process	GO:0071482	cellular response to light stimulus
biological_process	GO:0009664	plant-type cell wall organization
biological_process	GO:0035970	peptidyl-threonine dephosphorylation
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0046777	protein autophosphorylation
biological_process	GO:0010155	regulation of proton transport
biological_process	GO:0006364	rRNA processing
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
biological_process	GO:0042545	cell wall modification
biological_process	GO:0008643	carbohydrate transport
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0006897	endocytosis
cellular_component	GO:0010287	plastoglobule
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0009543	chloroplast thylakoid lumen
cellular_component	GO:0030093	chloroplast photosystem I
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005618	cell wall
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0016020	membrane
molecular_function	GO:0005351	carbohydrate:proton symporter activity
molecular_function	GO:0005516	calmodulin binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0004721	phosphoprotein phosphatase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo16821	0.84	Barchart \| Table
Spo21067	0.76	Barchart \| Table
Spo10537	0.76	Barchart \| Table
Spo10529	0.76	Barchart \| Table
Spo12202	0.75	Barchart \| Table
Spo02453	0.75	Barchart \| Table
Spo14416	0.74	Barchart \| Table
Spo17046	0.73	Barchart \| Table
Spo24857	0.73	Barchart \| Table
Spo00175	0.70	Barchart \| Table
Spo25347	0.70	Barchart \| Table
Spo23714	0.70	Barchart \| Table
Spo24712	0.69	Barchart \| Table
Spo13202	0.69	Barchart \| Table
Spo10927	0.68	Barchart \| Table
Spo01929	0.68	Barchart \| Table
Spo07501	0.68	Barchart \| Table
Spo10775	0.68	Barchart \| Table
Spo02452	0.67	Barchart \| Table
Spo19113	0.67	Barchart \| Table
Spo07619	0.66	Barchart \| Table
Spo01714	0.66	Barchart \| Table
Spo15639	0.66	Barchart \| Table
Spo25964	0.65	Barchart \| Table
Spo06031	0.65	Barchart \| Table
Spo03019	0.65	Barchart \| Table
Spo02085	0.65	Barchart \| Table