Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTCTCTCCATAAGAACACCTGCTTTTCTTCCTCTCCCCAATCTCAGTCACCCTCTAAAACTCCCATCAAATCCTCTCTTTCTCACTTTCCACTCTCAAACCCACAATCTTTTGTGTTTCAGCAAAGGGGGCAACCCAAATAAACCCAACAAAATCAGTGATGCAGACCTAGCATCAGATTTTGCTTCAGAAGTCAACAAGCTAAACACTCAGTCAGAGGAGAGAGAAAATGCAATGATGAGGAGCAAACAGCTGCTTTTCTCTGACCTCTGCAATTACCTTCAGATGAACCCAGAAGATGTCAGGAACAAATGGAGGAGTTTGAGCCCGGATGAAAAATTGGGTTTGGTTAAAGGGTTTGTTTCTGATTGGGGTTTGAATTTTCATCCCTTGTCACCGAAATCTGTTCAGGATTTGGTTGAGGAATTTGTGGTCAAGGATACTAAGGAGAAAGAAAACCCAGAAATTCGTCAGAAAGATGAAGATGTTAAATCTAGTTCTGATGTGTTTCTTCCTACTTTGAAGAGATTAATCATGGGTTTTTCCCCAAATAATTAA ATGTCTCTCTCCATAAGAACACCTGCTTTTCTTCCTCTCCCCAATCTCAGTCACCCTCTAAAACTCCCATCAAATCCTCTCTTTCTCACTTTCCACTCTCAAACCCACAATCTTTTGTGTTTCAGCAAAGGGGGCAACCCAAATAAACCCAACAAAATCAGTGATGCAGACCTAGCATCAGATTTTGCTTCAGAAGTCAACAAGCTAAACACTCAGTCAGAGGAGAGAGAAAATGCAATGATGAGGAGCAAACAGCTGCTTTTCTCTGACCTCTGCAATTACCTTCAGATGAACCCAGAAGATGTCAGGAACAAATGGAGGAGTTTGAGCCCGGATGAAAAATTGGGTTTGGTTAAAGGGTTTGTTTCTGATTGGGGTTTGAATTTTCATCCCTTGTCACCGAAATCTGTTCAGGATTTGGTTGAGGAATTTGTGGTCAAGGATACTAAGGAGAAAGAAAACCCAGAAATTCGTCAGAAAGATGAAGATGTTAAATCTAGTTCTGATGTGTTTCTTCCTACTTTGAAGAGATTAATCATGGGTTTTTCCCCAAATAATTAA ATGTCTCTCTCCATAAGAACACCTGCTTTTCTTCCTCTCCCCAATCTCAGTCACCCTCTAAAACTCCCATCAAATCCTCTCTTTCTCACTTTCCACTCTCAAACCCACAATCTTTTGTGTTTCAGCAAAGGGGGCAACCCAAATAAACCCAACAAAATCAGTGATGCAGACCTAGCATCAGATTTTGCTTCAGAAGTCAACAAGCTAAACACTCAGTCAGAGGAGAGAGAAAATGCAATGATGAGGAGCAAACAGCTGCTTTTCTCTGACCTCTGCAATTACCTTCAGATGAACCCAGAAGATGTCAGGAACAAATGGAGGAGTTTGAGCCCGGATGAAAAATTGGGTTTGGTTAAAGGGTTTGTTTCTGATTGGGGTTTGAATTTTCATCCCTTGTCACCGAAATCTGTTCAGGATTTGGTTGAGGAATTTGTGGTCAAGGATACTAAGGAGAAAGAAAACCCAGAAATTCGTCAGAAAGATGAAGATGTTAAATCTAGTTCTGATGTGTTTCTTCCTACTTTGAAGAGATTAATCATGGGTTTTTCCCCAAATAATTAA MSLSIRTPAFLPLPNLSHPLKLPSNPLFLTFHSQTHNLLCFSKGGNPNKPNKISDADLASDFASEVNKLNTQSEERENAMMRSKQLLFSDLCNYLQMNPEDVRNKWRSLSPDEKLGLVKGFVSDWGLNFHPLSPKSVQDLVEEFVVKDTKEKENPEIRQKDEDVKSSSDVFLPTLKRLIMGFSPNN Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo03064.1 vs. NCBI nr
Match: gi|902177055|gb|KNA08879.1| (hypothetical protein SOVF_158720 [Spinacia oleracea]) HSP 1 Score: 375.2 bits (962), Expect = 6.800e-101 Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 1
BLAST of Spo03064.1 vs. NCBI nr
Match: gi|731359806|ref|XP_010691476.1| (PREDICTED: uncharacterized protein LOC104904792 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 248.4 bits (633), Expect = 9.500e-63 Identity = 122/189 (64.55%), Postives = 154/189 (81.48%), Query Frame = 1
BLAST of Spo03064.1 vs. NCBI nr
Match: gi|870848668|gb|KMT00957.1| (hypothetical protein BVRB_9g222220 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 159.5 bits (402), Expect = 5.800e-36 Identity = 70/107 (65.42%), Postives = 94/107 (87.85%), Query Frame = 1
BLAST of Spo03064.1 vs. NCBI nr
Match: gi|1000968001|ref|XP_002518309.2| (PREDICTED: uncharacterized protein LOC8279178 [Ricinus communis]) HSP 1 Score: 130.6 bits (327), Expect = 2.900e-27 Identity = 67/138 (48.55%), Postives = 91/138 (65.94%), Query Frame = 1
BLAST of Spo03064.1 vs. NCBI nr
Match: gi|223542529|gb|EEF44069.1| (conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 130.6 bits (327), Expect = 2.900e-27 Identity = 67/138 (48.55%), Postives = 91/138 (65.94%), Query Frame = 1
BLAST of Spo03064.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QNP0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_158720 PE=4 SV=1) HSP 1 Score: 375.2 bits (962), Expect = 4.700e-101 Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 1
BLAST of Spo03064.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BIX6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g222220 PE=4 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 4.100e-36 Identity = 70/107 (65.42%), Postives = 94/107 (87.85%), Query Frame = 1
BLAST of Spo03064.1 vs. UniProtKB/TrEMBL
Match: B9RX40_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0817010 PE=4 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 2.000e-27 Identity = 67/138 (48.55%), Postives = 91/138 (65.94%), Query Frame = 1
BLAST of Spo03064.1 vs. UniProtKB/TrEMBL
Match: M0ZU07_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400003116 PE=4 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 1.000e-26 Identity = 73/180 (40.56%), Postives = 109/180 (60.56%), Query Frame = 1
BLAST of Spo03064.1 vs. UniProtKB/TrEMBL
Match: B9HN68_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s08390g PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 8.500e-26 Identity = 74/181 (40.88%), Postives = 107/181 (59.12%), Query Frame = 1
BLAST of Spo03064.1 vs. TAIR (Arabidopsis)
Match: AT5G64480.1 (unknown protein) HSP 1 Score: 85.9 bits (211), Expect = 2.900e-17 Identity = 46/134 (34.33%), Postives = 82/134 (61.19%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo03064.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo03064.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo03064.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo03064.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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