Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TACCAGCTCGAAAGGATCATGAAAATCGTGAAAAGACAATAATAGTGGTACATGCTAAAATAAATGCGTATGAATACATTATATCCGTGGACCGTTTGCAGCCTCACCTGCTTTGCTTCACTTAACTCTTGCTCTATCACTTGCCCACTTGTCTTTTAAGGACTCGTGTGTTTTAAATATTGAACCCAAATCCCAACTAATTAACTTCAAAAAACAAACAAAAAAGGTGTCCATTTCTTAAAAATAGGTTGAGGTTTATGCAAGCAAAACAAAGATGGAGATGATTAAAATTGAAGCAATTTTGAGATTATGTGCCTTGTTGACACTCTTGTTGGCTGCTATTGTTATGATGACGGATAACCAAACCAAAACATTTTTTGGTTATTACAAAATGAGGGCTGATTATAAATTGGCTAAGATTTTGAAGTAAGTTTTCTTCCTTTTACTTTAGTTTTCTTTGATTTTAGTTACGAAATACCCTCTCTATTTCATAAGCGCGTGTACATCAGTATGATTTTGAGATTGAATTTGAAGAATTCTAATATGATTTTTAAAACCCAAAAGCATTAGCGTAGTTAGAGTAAAAATCTCGAAATTATGCATTTATACATATTGTGCATACTTTATTTTGAAATGGAGAGAGTACGTTTATGTATGATAGATCGGCGAGCACAGTAGTTCTAAACAAGTTTAATTTGATTTTGGTTGATTAGAGTATCGGTGTACGTGTATTTGATTGGAGCCGGGTACACCTTACTTCAACTAGTTCGATGTATGGCCTTCATGACTAAGTATGAGGGAGATAAATTAAGCTGCTCAAGCCATATTCTTAAATGGTTTTATTTCTCTCTTGATCAGGTATGTACGTACCTACTACGTTGCAACTATAGATCCCTATGCTTCTTATTTCGTATCTTTATAAGTTGTTCGATTTACAAATACTACATAGTAACTTTATTTGCTTCCCCTATGTTCCTAGATAGGTACACCGTAATTGTTTTTGTGTATTCATAAGGAACAGATATAAAAGTTATGTAAATGATTAAATTAGTATCTTGAATCTTGACTATCATAATTTACTCACTTAATTTCAGCAAATTTAAGAACTTTTTCAACTTAAATCAGCCACCAATATATTGCATCTAACTTGTCCATTTCCGCTTGCATATAAAGCCATAATTTGATCAGTCGGTTTAATTATTGCTTTCTGATAAAATGACAAAAACACTAATTTCCATGTTTAATTAATTTAAGGATTTTTTTGGTATTTACTACTTTAAAAATACACCACTTTTGTATTTACTAACTTATGAAAATTTTATTTTAAATTACTACTTTAAAGTTGCATTTTTTTTTTTGTATTTACTATCACTTTACAGTTTTCTCATTTTAAAATTGAGATATCTCTTTCGTTTCTTAACCATTTTAAGTGATTCAAAACTCATTCTTCTCAATTATGCGTAAGAATTTCATAGGGATCTTGCTTTTAAGGATCTTGCTTTTAACATTTTGTAAAAGGTAAAATGAAATAAATATTATTTGTAAAATTTTAAAACATTTATGAATTATCAAATGAATTGTTTTGAAATGTCGCTATCAATGAAATCCCTATAGAAAAAGGAAAATAATGAACTTTGAATTACTTTAAACAATTAAGAAACGAAAGAGATATCTTAATTTTAAAATGAGAAAATTGTAAAGTGGTAGTAAATAATAAAAATTTGGAACTTTAAGGTAGTAATTTAAAACAAAAATTTCATAAGGTAGTAAATACAAAAGTGGTGTATTTTTAAGGTAGTAAATACCAAAATTTCCTTAATATAAATAAATAATGGTCAAACTATTAATTTTTCATAGGTAGAGTTATTTAAAAGATACTTCTCTGATTTTATGGACAGACCGATTTAGGTCCTATTTTGTTCACCTTGTTTCCAATTATTTTACAAAAAATGAGTTCTGATAAGACGAATTCAGGAAAAACAAGGGTTATCCAAGTACAAATTTTAACTACAACAAATTTCGAAGTTCAATTGAGTTTAGATAAATTCACATAAGATAAATTTAGGAAAAACAAGTGAAAGTCAAGTGAATATAACACATCCTTAATTATTAAAAAAAATGTTAATGTTTCAAAATGAAGCCATTTTTCGTTTTAATCATTCTATGAACGTCTCCCCATTTTAGAGTATTTCCTTTCTTGGTAGGTTATAGAGTAATTTGGATTATACACTCGGCCACTCGGGTGCACAATGCTTATTGTGCACCCTAATGAACATTTATTGAACACCTATAGTGAACATAGAGAATGATTTTTTATTTTTTGAGGGGACATAGAGAATGATTTCAGTGTACATGTACAAGTGGAATACTTGAACTATATGTTCTTATGAACAATATGTTAATTTACTATATGTTATTTGGGTATAAACAATATGTTCTAGCTTTATATTTGAATTAAATGTTCATTTAAAAAACATGATGCACAATGACCATTATGCACCTAAATACCTAATGAGCATAGAGAATAATTTCAATGTACATATACAAGTGGAATATTTGAACTATATGTTTATTTACTATAGGTTCTTTGGGTATAAACAATATGTTCTTTATATTTAAACTAAATTAATGTTCATTTAAAAACATGGTGCACAATAAACATATATTGTGCACCCGAATGCATAAACCATATTTTAAGATAATGGACATTTCACGACATAATTAGAGCTGACTTCTTTTCCCGTGGGGTTGTGTGGTAGCTACCAACTATAGTGACTCGTGATTGAGGCAGCCCCCAGTCCCCACTATACCCCCCGAACACACCCATCTATCCACACGTCCCCAGTCCAATCATAAAAGATTTTACTGTGGATGCCAATTAGTTTAGTTGATAAAATCTTGAGGGATTAGTATCCAAGACTGGGATCTAAATCCCGCCAACATCTTTTGTCGCTTTACTCATAAAAGATTTTACTCACTCTTCGTTTAGGATGTTACATATGAAGCCATGTTTACTTTTAACAAACATTGTTTACCAGAATCACCACCTTATCTATCACCCTTCCATGCATTGCACGGTACATTAATTATATTATGTATCGATGAATTGAAACAATGTAGTAATGGACATTCGATGTATGCTGAATATATATATTTGACCGTACGTATTGTTGTTTAATTAGGTGGCAGCATACGTTGTTTTCGCAATAGTATGTGCAACACTTGAAATATCATTCCTGGTATTAACCGGTTCAAAGGATCTTCAATGGATGAAACTATGCAGCAAATATGTGAGGTTCTGCGTTCAAATTGGTGGTTCCATAGCTTGTGGTGGCGTTGCATCCATCTTATTAGCCGTCATTTCGGCCATTTCCACCTTTAATTTGTTCAGATGGTATTCTCCAAACTTCTTGTGCTTAAAACCCAAGAAGATTGGTATCGCAGCCACTACCAGCTAGCTAGCTATATATATATGCATGACTCATGCCATTATTAGTTGTTTGCTAGGTAGTACTCCGTACTAGTATAATATACGAACAAGATTTTTAATGTACAATACTTTTATCATTTTATCTCCTAGTATAAATCACTTTAAGTATATTAGTATTGTATTAAGGATTTTCAAACACAGACAATGTAATGTACGTGTACTCCTTTATTTACACAAATCAAGTGTACATAAAGTATAACTTGTGTTAGGTGTTGATTCAGTAGGCTCCCTTCTTCTTACTAATTTTTTTTAAAAAAATAAAGTGTACATAAAGTAAATATTGTATAGTACGTGCTACAAAGACTCCG TACCAGCTCGAAAGGATCATGAAAATCGTGAAAAGACAATAATAGTGGTACATGCTAAAATAAATGCGTATGAATACATTATATCCGTGGACCGTTTGCAGCCTCACCTGCTTTGCTTCACTTAACTCTTGCTCTATCACTTGCCCACTTGTCTTTTAAGGACTCGTGTGTTTTAAATATTGAACCCAAATCCCAACTAATTAACTTCAAAAAACAAACAAAAAAGGTGTCCATTTCTTAAAAATAGGTTGAGGTTTATGCAAGCAAAACAAAGATGGAGATGATTAAAATTGAAGCAATTTTGAGATTATGTGCCTTGTTGACACTCTTGTTGGCTGCTATTGTTATGATGACGGATAACCAAACCAAAACATTTTTTGGTTATTACAAAATGAGGGCTGATTATAAATTGGCTAAGATTTTGAAAGTATCGGTGTACGTGTATTTGATTGGAGCCGGGTACACCTTACTTCAACTAGTTCGATGTATGGCCTTCATGACTAAGTATGAGGGAGATAAATTAAGCTGCTCAAGCCATATTCTTAAATGGTTTTATTTCTCTCTTGATCAGGTGGCAGCATACGTTGTTTTCGCAATAGTATGTGCAACACTTGAAATATCATTCCTGGTATTAACCGGTTCAAAGGATCTTCAATGGATGAAACTATGCAGCAAATATGTGAGGTTCTGCGTTCAAATTGGTGGTTCCATAGCTTGTGGTGGCGTTGCATCCATCTTATTAGCCGTCATTTCGGCCATTTCCACCTTTAATTTGTTCAGATGGTATTCTCCAAACTTCTTGTGCTTAAAACCCAAGAAGATTGGTATCGCAGCCACTACCAGCTAGCTAGCTATATATATATGCATGACTCATGCCATTATTAGTTGTTTGCTAGGTAGTACTCCGTACTAGTATAATATACGAACAAGATTTTTAATGTACAATACTTTTATCATTTTATCTCCTAGTATAAATCACTTTAAGTATATTAGTATTGTATTAAGGATTTTCAAACACAGACAATGTAATGTACGTGTACTCCTTTATTTACACAAATCAAGTGTACATAAAGTATAACTTGTGTTAGGTGTTGATTCAGTAGGCTCCCTTCTTCTTACTAATTTTTTTTAAAAAAATAAAGTGTACATAAAGTAAATATTGTATAGTACGTGCTACAAAGACTCCG ATGGAGATGATTAAAATTGAAGCAATTTTGAGATTATGTGCCTTGTTGACACTCTTGTTGGCTGCTATTGTTATGATGACGGATAACCAAACCAAAACATTTTTTGGTTATTACAAAATGAGGGCTGATTATAAATTGGCTAAGATTTTGAAAGTATCGGTGTACGTGTATTTGATTGGAGCCGGGTACACCTTACTTCAACTAGTTCGATGTATGGCCTTCATGACTAAGTATGAGGGAGATAAATTAAGCTGCTCAAGCCATATTCTTAAATGGTTTTATTTCTCTCTTGATCAGGTGGCAGCATACGTTGTTTTCGCAATAGTATGTGCAACACTTGAAATATCATTCCTGGTATTAACCGGTTCAAAGGATCTTCAATGGATGAAACTATGCAGCAAATATGTGAGGTTCTGCGTTCAAATTGGTGGTTCCATAGCTTGTGGTGGCGTTGCATCCATCTTATTAGCCGTCATTTCGGCCATTTCCACCTTTAATTTGTTCAGATGGTATTCTCCAAACTTCTTGTGCTTAAAACCCAAGAAGATTGGTATCGCAGCCACTACCAGCTAG MEMIKIEAILRLCALLTLLLAAIVMMTDNQTKTFFGYYKMRADYKLAKILKVSVYVYLIGAGYTLLQLVRCMAFMTKYEGDKLSCSSHILKWFYFSLDQVAAYVVFAIVCATLEISFLVLTGSKDLQWMKLCSKYVRFCVQIGGSIACGGVASILLAVISAISTFNLFRWYSPNFLCLKPKKIGIAATTS Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo03065.1 vs. NCBI nr
Match: gi|902177057|gb|KNA08881.1| (hypothetical protein SOVF_158740 [Spinacia oleracea]) HSP 1 Score: 367.9 bits (943), Expect = 1.100e-98 Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 1
BLAST of Spo03065.1 vs. NCBI nr
Match: gi|731359812|ref|XP_010691480.1| (PREDICTED: CASP-like protein 2C1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 252.7 bits (644), Expect = 5.200e-64 Identity = 128/188 (68.09%), Postives = 156/188 (82.98%), Query Frame = 1
BLAST of Spo03065.1 vs. NCBI nr
Match: gi|596218191|ref|XP_007223970.1| (hypothetical protein PRUPE_ppa014614mg, partial [Prunus persica]) HSP 1 Score: 147.9 bits (372), Expect = 1.800e-32 Identity = 90/176 (51.14%), Postives = 113/176 (64.20%), Query Frame = 1
BLAST of Spo03065.1 vs. NCBI nr
Match: gi|645234217|ref|XP_008223711.1| (PREDICTED: CASP-like protein POPTRDRAFT_578614 [Prunus mume]) HSP 1 Score: 147.5 bits (371), Expect = 2.300e-32 Identity = 89/178 (50.00%), Postives = 115/178 (64.61%), Query Frame = 1
BLAST of Spo03065.1 vs. NCBI nr
Match: gi|870848670|gb|KMT00959.1| (hypothetical protein BVRB_9g222240 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 141.4 bits (355), Expect = 1.700e-30 Identity = 66/91 (72.53%), Postives = 78/91 (85.71%), Query Frame = 1
BLAST of Spo03065.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QQR2_SPIOL (CASP-like protein OS=Spinacia oleracea GN=SOVF_158740 PE=3 SV=1) HSP 1 Score: 367.9 bits (943), Expect = 7.700e-99 Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 1
BLAST of Spo03065.1 vs. UniProtKB/TrEMBL
Match: M5XGU4_PRUPE (CASP-like protein (Fragment) OS=Prunus persica GN=PRUPE_ppa014614mg PE=3 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 1.300e-32 Identity = 90/176 (51.14%), Postives = 113/176 (64.20%), Query Frame = 1
BLAST of Spo03065.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BLQ3_BETVU (CASP-like protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g222240 PE=3 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 1.200e-30 Identity = 66/91 (72.53%), Postives = 78/91 (85.71%), Query Frame = 1
BLAST of Spo03065.1 vs. UniProtKB/TrEMBL
Match: A0A059CJU0_EUCGR (CASP-like protein OS=Eucalyptus grandis GN=EUGRSUZ_C00172 PE=3 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 4.400e-30 Identity = 81/178 (45.51%), Postives = 111/178 (62.36%), Query Frame = 1
BLAST of Spo03065.1 vs. UniProtKB/TrEMBL
Match: A0A0B0MH02_GOSAR (CASP-like protein OS=Gossypium arboreum GN=F383_02234 PE=3 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 7.600e-30 Identity = 83/176 (47.16%), Postives = 113/176 (64.20%), Query Frame = 1
BLAST of Spo03065.1 vs. ExPASy Swiss-Prot
Match: CSPL2_GOSHI (CASP-like protein XL3 OS=Gossypium hirsutum GN=XL3 PE=2 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 6.800e-32 Identity = 83/176 (47.16%), Postives = 113/176 (64.20%), Query Frame = 1
BLAST of Spo03065.1 vs. ExPASy Swiss-Prot
Match: CSPL9_VITVI (CASP-like protein 2C1 OS=Vitis vinifera GN=VIT_11s0052g01140 PE=2 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 3.700e-30 Identity = 78/181 (43.09%), Postives = 111/181 (61.33%), Query Frame = 1
BLAST of Spo03065.1 vs. ExPASy Swiss-Prot
Match: CSPLG_POPTR (CASP-like protein 2C1 OS=Populus trichocarpa GN=POPTRDRAFT_578614 PE=3 SV=2) HSP 1 Score: 132.1 bits (331), Expect = 6.400e-30 Identity = 85/180 (47.22%), Postives = 110/180 (61.11%), Query Frame = 1
BLAST of Spo03065.1 vs. ExPASy Swiss-Prot
Match: CSPL3_SOYBN (CASP-like protein 2C1 OS=Glycine max PE=2 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 2.700e-28 Identity = 76/178 (42.70%), Postives = 106/178 (59.55%), Query Frame = 1
BLAST of Spo03065.1 vs. ExPASy Swiss-Prot
Match: CSPL4_ARALL (CASP-like protein 2C1 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_657503 PE=3 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 5.200e-24 Identity = 66/167 (39.52%), Postives = 102/167 (61.08%), Query Frame = 1
BLAST of Spo03065.1 vs. TAIR (Arabidopsis)
Match: AT4G25830.1 (Uncharacterised protein family (UPF0497)) HSP 1 Score: 111.3 bits (277), Expect = 6.600e-25 Identity = 68/173 (39.31%), Postives = 104/173 (60.12%), Query Frame = 1
BLAST of Spo03065.1 vs. TAIR (Arabidopsis)
Match: AT4G16442.1 (Uncharacterised protein family (UPF0497)) HSP 1 Score: 86.7 bits (213), Expect = 1.700e-17 Identity = 63/165 (38.18%), Postives = 88/165 (53.33%), Query Frame = 1
BLAST of Spo03065.1 vs. TAIR (Arabidopsis)
Match: AT2G35760.1 (Uncharacterised protein family (UPF0497)) HSP 1 Score: 86.3 bits (212), Expect = 2.300e-17 Identity = 65/165 (39.39%), Postives = 88/165 (53.33%), Query Frame = 1
BLAST of Spo03065.1 vs. TAIR (Arabidopsis)
Match: AT4G15610.1 (Uncharacterised protein family (UPF0497)) HSP 1 Score: 55.1 bits (131), Expect = 5.600e-8 Identity = 46/167 (27.54%), Postives = 82/167 (49.10%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo03065.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo03065.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo03065.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo03065.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 4
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
|