Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCGCACCATGATTTTAACCGATTAATCAAAACCATCCTTTAATTGAAGGGATGACAATAATATTGGCTTACAAAGTCAAAACAATAATACTAAATCAAACGAGTAAAACACAATTTGTGGCTGAAAAACGCACAATCGTAGAAGGCTCTAGAAACGCACACGCCGCCCCACCCCCCAAAACGCAAAAGGGCCCACCAACAGAACCTCCCGGAGGCCCAAACTTTCGGCCCTCTTTCCTCTCTTCAAAGGTTTCTCATACCCTAGAAAATCTTTCTTTTGCATTTCGCCTTTGTAATACCCGAAATATACCAGTAGAGAGAGAAAGCTAGAAAGAGAAAGTAATGGCGACATTCAGCGAAGCACCACCAGGCAACAAGGATGTCGGAGCTAAGATCTTCAAGACTAAGTGCGCTCAATGTCACACCGTCGATCAAGGCGCTGGTCACAAACAAGGTCTTTTTTCTCTTTCATTTTTTAATGAAATTTCTGGAAATTTGGTGTATGTTATTGTTTAGATCTATGAATTGTATATGCGATCTGATTTGATTTTGGTTCATTTTAGTTTTGAGGTTTTGCGATTATTTGATTTATCCTGAAATGATCTTAGATTATGTTTATTCCGGCGCAAAACAATCATGCAATTGAAGTTTCTATGATTATTGTTTGTAGATCTTTAATAATTATTGTGATTCTATCGATGAAGTTCATATGCTGCTTTGATTTGCTCTTTTATGTGAATTGAATTTTGCTTTTCACGTTGATATTAGGTTTTATGGATTAAGAACTAATCATATGCTGTGTTAAGTTGTAAAATGCAATTGGAAGCATGTATTTGTTGGAACATGTGAATGTTTGCCAAAAATACTTTAGGTATGATTTATTCGTTGCGGTTAATAAGAGCCTTTAGCGATGAACTGATTTGATTAAGGTGGTGGAAGGCTAAATATTCACACTCTCTATACAGAATGATTAGATAAAAGCAGGACGGTGGAAAGACTCGGTGAATTTCTCTAGTAATGGATAGAATTTCTTTTTGGAGACTTTGTTTGCTTAAATTTTCTTTCGATTGTGGTCGCCGAGAATAAACATAATCTAAGCCTCATAATTGTTTGCTCCATGGGTTTCCATTGTCTATTAGCCGTTCGGAAATTTGCATTGTTTTGCTCATGGGTTAATAAACGGCTAATAGACTTACGTTTTGCTCCATGGGTTTCCATTGTCTATTAGCCGTTGGGAAATTTGCAAATAGGAAAAATATTTCTGGGGTAACTTATTATCCAGCGTCGTTGCTGAGCAATCTTTGTATTTAGGATTTGACTTTGGACTGTAAAATGCAATATATCACTTTATGCTTCATATTTACACAGAAAGCTTTCTTTAAAGTCCAAATAACATGAAATACGGAGATGTTTTCGTTCATTGAAAATTTAGATATTTTCTATTTGCTCGTGGTGATTGAGCTATGCTTGGTGTGTGCTGGATGCTACGGTCTTAACTGAAAGTTGAGACTGTATTGAGGCGGGGACCTTTACTTCTAGTCACCCGTGGAGGCTGTGTTGATACTGAACTTGTCATAGCTGTATCTAAATTTGAAGTGACAGCCCTGTTTGTGAATTTTTCATGAGTTGGTATATGATTAAATTGTGTTCTTTTCGCTGTTATTGAGTCAAGTTGCTTGCATTGTTTTTAACAAATGGTTAGTTAATAATCATTGTTAATTACAATTGGTAGGTTCCTGTGTATGTGTGTCTTTTTTTTTTCCTCGGTGTGGGGGTTTGATGATCTGGCGTAACTGTGTTGACAATTTGTTGATGCTGTTGTAGTGATTGAATATCCTGTCACTGACTGTATATTTTCCCTAAGCAAATGAAAAAAAGAATCTGTTCCCCTGAAAAGCTCCACCATCCATCGGTTAAAACTTATCTGATGTTTGTCTTGGTTTGTATCAGGTCCTAATCTAAATGGCCTTTTTGGGAGGCAATCTGGGACAGCTGCTTCGTACTCTTACTCTGCTGCTAACAAGAACAAGGCTGTCATCTGGAGTGAAGATACTCTATACGAGTACTTGCTGAACCCCAAGAAGGTTTGTTTTTTATCTGTCTCATCGGAGACCTATGAAATCTTCCTTTCCCACCAGTTTCTCTTGTTTTATTTGAAATCTCAAATGCCAAAAGCACTGAAATTCTACTGTTGTCACATGTTTCCTGTTCTATGGTCTCTACTAACCGACCTCGTTCTTAACTCAAGAATCTGTAATTTCGTCCTTACTTGTAAGCTATTGCCAACTGAAACGAAACAAGCCTAAGCCTTATCGTATGAAATGGGTGTGGTGATTTGTAGCAACGGTGCCTCGAGTTCTTTCCTCTCTCCTTAAAGTAGATAAATAAGCAGAATTTTATGTGTAAAAAGAGGCAAGTAGTAACGTGTTATCATGATTTATCGATGTCATAATACCCTTATAGGGGCTTTCTTCAATTTCATTAGTCTTCGTTTGTTTGAATGATTTGTTTCTCATGATCTGAGGAATCCTCATATTGGTCCAAGAGTCTGCACCAAATACCAACTTTCTTTTGTAACTTGGAATTAGACAAGTGTTGTCCATCAAAGATTATCCGGTGTCATGTTTTTTACTCACACATTTGATAACAGACAAAAATTCTTTCACATTCTCTATTCACACATTTGATATCTTGCAGTACATCCCTGGTACAAAGATGGTGTTCCCTGGTTTGAAGAAGCCACAAGATCGTGCCGACCTTATTGCATACCTGAAGGATTCTACTCAGTGATCACACCACATACTTGTCATCTTTTATGTAGGAGAGGTCAAAGGAGGATTTTGATCGAAACATGAGATTTTTGTTTCCTTAGTAAGAGCAACTTAGAATTCGTTTTGCAAATAAGTTTTACAGTAACGGGGAAATGTTACCCTCGATTCATATTACATCATGCTGTTACAGCTTGGTTTTATCAACATTATTGTTTTACATACGGTCTTATTGACTTGATTTGTTTCTGTAAAAGGAAAATGAAACTGAAACGTTCCATCGTTTTTGTTATAGATGTTGGAACATTGTTTACAAATGGTTTGGAATTGTGATCGTTTCTTTTGGTACAAAGCATCCTTTATTACAGTTTTATATTACGTTTAGGTGATAGTCTCAAGTTGGTTGCTTCTTTGTCTGTTCAAGGAGGAGCTGTGTTTCAATTGGGAATTTTGGTTGTTTAATGTTGAGGATTCTTTGGAAGATAATCTGTTTTCTTACTTCACTAAAGATGAATCTGGCCAATTTTCTTTTGTATTTTTATTTTAAATTTTCAATATTGAAAATGTAGCAAGTCAAATAATTTTATCGGGC CCGCACCATGATTTTAACCGATTAATCAAAACCATCCTTTAATTGAAGGGATGACAATAATATTGGCTTACAAAGTCAAAACAATAATACTAAATCAAACGAGTAAAACACAATTTGTGGCTGAAAAACGCACAATCGTAGAAGGCTCTAGAAACGCACACGCCGCCCCACCCCCCAAAACGCAAAAGGGCCCACCAACAGAACCTCCCGGAGGCCCAAACTTTCGGCCCTCTTTCCTCTCTTCAAAGGTTTCTCATACCCTAGAAAATCTTTCTTTTGCATTTCGCCTTTGTAATACCCGAAATATACCAGTAGAGAGAGAAAGCTAGAAAGAGAAAGTAATGGCGACATTCAGCGAAGCACCACCAGGCAACAAGGATGTCGGAGCTAAGATCTTCAAGACTAAGTGCGCTCAATGTCACACCGTCGATCAAGGCGCTGGTCACAAACAAGGTCCTAATCTAAATGGCCTTTTTGGGAGGCAATCTGGGACAGCTGCTTCGTACTCTTACTCTGCTGCTAACAAGAACAAGGCTGTCATCTGGAGTGAAGATACTCTATACGAGTACTTGCTGAACCCCAAGAAGTACATCCCTGGTACAAAGATGGTGTTCCCTGGTTTGAAGAAGCCACAAGATCGTGCCGACCTTATTGCATACCTGAAGGATTCTACTCAGTGATCACACCACATACTTGTCATCTTTTATGTAGGAGAGGTCAAAGGAGGATTTTGATCGAAACATGAGATTTTTGTTTCCTTAGTAAGAGCAACTTAGAATTCGTTTTGCAAATAAGTTTTACAGTAACGGGGAAATGTTACCCTCGATTCATATTACATCATGCTGTTACAGCTTGGTTTTATCAACATTATTGTTTTACATACGGTCTTATTGACTTGATTTGTTTCTGTAAAAGGAAAATGAAACTGAAACGTTCCATCGTTTTTGTTATAGATGTTGGAACATTGTTTACAAATGGTTTGGAATTGTGATCGTTTCTTTTGGTACAAAGCATCCTTTATTACAGTTTTATATTACGTTTAGGTGATAGTCTCAAGTTGGTTGCTTCTTTGTCTGTTCAAGGAGGAGCTGTGTTTCAATTGGGAATTTTGGTTGTTTAATGTTGAGGATTCTTTGGAAGATAATCTGTTTTCTTACTTCACTAAAGATGAATCTGGCCAATTTTCTTTTGTATTTTTATTTTAAATTTTCAATATTGAAAATGTAGCAAGTCAAATAATTTTATCGGGC ATGGCGACATTCAGCGAAGCACCACCAGGCAACAAGGATGTCGGAGCTAAGATCTTCAAGACTAAGTGCGCTCAATGTCACACCGTCGATCAAGGCGCTGGTCACAAACAAGGTCCTAATCTAAATGGCCTTTTTGGGAGGCAATCTGGGACAGCTGCTTCGTACTCTTACTCTGCTGCTAACAAGAACAAGGCTGTCATCTGGAGTGAAGATACTCTATACGAGTACTTGCTGAACCCCAAGAAGTACATCCCTGGTACAAAGATGGTGTTCCCTGGTTTGAAGAAGCCACAAGATCGTGCCGACCTTATTGCATACCTGAAGGATTCTACTCAGTGA MATFSEAPPGNKDVGAKIFKTKCAQCHTVDQGAGHKQGPNLNGLFGRQSGTAASYSYSAANKNKAVIWSEDTLYEYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKDSTQ Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo03095.1 vs. NCBI nr
Match: gi|902194342|gb|KNA12519.1| (hypothetical protein SOVF_124870 [Spinacia oleracea]) HSP 1 Score: 235.0 bits (598), Expect = 6.600e-59 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 1
BLAST of Spo03095.1 vs. NCBI nr
Match: gi|118024|sp|P00073.1|CYC_SPIOL (RecName: Full=Cytochrome c) HSP 1 Score: 230.3 bits (586), Expect = 1.600e-57 Identity = 110/111 (99.10%), Postives = 110/111 (99.10%), Query Frame = 1
BLAST of Spo03095.1 vs. NCBI nr
Match: gi|731359880|ref|XP_010691513.1| (PREDICTED: cytochrome c [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 220.3 bits (560), Expect = 1.700e-54 Identity = 104/112 (92.86%), Postives = 107/112 (95.54%), Query Frame = 1
BLAST of Spo03095.1 vs. NCBI nr
Match: gi|293335855|ref|NP_001170028.1| (cytochrome c [Zea mays]) HSP 1 Score: 210.7 bits (535), Expect = 1.300e-51 Identity = 97/111 (87.39%), Postives = 103/111 (92.79%), Query Frame = 1
BLAST of Spo03095.1 vs. NCBI nr
Match: gi|117986|sp|P00072.1|CYC_FAGES (RecName: Full=Cytochrome c) HSP 1 Score: 210.7 bits (535), Expect = 1.300e-51 Identity = 98/111 (88.29%), Postives = 103/111 (92.79%), Query Frame = 1
BLAST of Spo03095.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QZ23_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_124870 PE=3 SV=1) HSP 1 Score: 235.0 bits (598), Expect = 4.600e-59 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 1
BLAST of Spo03095.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BJ03_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g222490 PE=3 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 1.200e-54 Identity = 104/112 (92.86%), Postives = 107/112 (95.54%), Query Frame = 1
BLAST of Spo03095.1 vs. UniProtKB/TrEMBL
Match: A0A0D6R8Z7_ARACU (Uncharacterized protein OS=Araucaria cunninghamii PE=3 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 8.400e-53 Identity = 100/111 (90.09%), Postives = 104/111 (93.69%), Query Frame = 1
BLAST of Spo03095.1 vs. UniProtKB/TrEMBL
Match: A0A0C9S3Z9_9SPER (TSA: Wollemia nobilis Ref_Wollemi_Transcript_27722_693 transcribed RNA sequence OS=Wollemia nobilis PE=3 SV=1) HSP 1 Score: 212.6 bits (540), Expect = 2.400e-52 Identity = 99/111 (89.19%), Postives = 104/111 (93.69%), Query Frame = 1
BLAST of Spo03095.1 vs. UniProtKB/TrEMBL
Match: C0PK55_MAIZE (Uncharacterized protein OS=Zea mays GN=LOC100383938 PE=2 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 9.300e-52 Identity = 97/111 (87.39%), Postives = 103/111 (92.79%), Query Frame = 1
BLAST of Spo03095.1 vs. ExPASy Swiss-Prot
Match: CYC_SPIOL (Cytochrome c OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 230.3 bits (586), Expect = 1.000e-59 Identity = 110/111 (99.10%), Postives = 110/111 (99.10%), Query Frame = 1
BLAST of Spo03095.1 vs. ExPASy Swiss-Prot
Match: CYC_FAGES (Cytochrome c OS=Fagopyrum esculentum PE=1 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 8.300e-54 Identity = 98/111 (88.29%), Postives = 103/111 (92.79%), Query Frame = 1
BLAST of Spo03095.1 vs. ExPASy Swiss-Prot
Match: CYC_PASSA (Cytochrome c OS=Pastinaca sativa PE=1 SV=1) HSP 1 Score: 207.6 bits (527), Expect = 7.000e-53 Identity = 94/110 (85.45%), Postives = 105/110 (95.45%), Query Frame = 1
BLAST of Spo03095.1 vs. ExPASy Swiss-Prot
Match: CYC_WHEAT (Cytochrome c OS=Triticum aestivum PE=1 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 9.200e-53 Identity = 97/110 (88.18%), Postives = 102/110 (92.73%), Query Frame = 1
BLAST of Spo03095.1 vs. ExPASy Swiss-Prot
Match: CYC_ALLPO (Cytochrome c OS=Allium porrum PE=1 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 9.200e-53 Identity = 93/110 (84.55%), Postives = 103/110 (93.64%), Query Frame = 1
BLAST of Spo03095.1 vs. TAIR (Arabidopsis)
Match: AT1G22840.1 (CYTOCHROME C-1) HSP 1 Score: 201.8 bits (512), Expect = 2.200e-52 Identity = 94/111 (84.68%), Postives = 99/111 (89.19%), Query Frame = 1
BLAST of Spo03095.1 vs. TAIR (Arabidopsis)
Match: AT4G10040.1 (cytochrome c-2) HSP 1 Score: 196.8 bits (499), Expect = 7.000e-51 Identity = 91/111 (81.98%), Postives = 98/111 (88.29%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo03095.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo03095.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo03095.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo03095.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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