Spo03108 (gene)

Overview
NameSpo03108
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionPentatricopeptide repeat-containing protein, putative
LocationSpoScf_01682 : 105418 .. 106893 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCAACTCTTGCGCTCGTCTCAGTAGCTTATTTTCCAGAAATGCAACCAACACCATTAAATCAAAACTACCCCAAATCCAAACCCCTAAATCCATAAAAGAGAAACCATTGATAACCCTAGTCAAGAATCGAGCAGTTAGCAATGGTGTTAGTGTTAAAGACCTCATGGATGAGAGAGACTCCCAAAAACTCGTTGAAAAGTTCAACTCACTTTCTCAGCAAAAGGATTTCAGGAGCAAGTATAAAATCTACGATTACACAATTCGTCGTCTTGCTCTCGCAAATCAGTCTACGTTAATTAAAGAGGTGCTAGAATCCCAGAAGAAATACATTAACGGGGAAGGATTTGCTTCACGGATTATATTTCTGTATGGGAAAGCAGGTTTGTTTGATCATGCACAGAAGCTGTTCGACGAATTGCCTGAACGAGGTTGTGAACAAGGGGCCAGATCTTTTAACGCCCTTTTAGGGGCTGCTTCTTATTTGGAGGATTTTGATAAAGTTCACAAACTTTTTCGTGAGTTGCCATTGAAGTTATCGATTAAGCCAATTACTGGGTCTTATAACATAGCTGCTAATGCGCTCTGTAAACTCGGGTTGATTGATAAGGCTGCAGCATTGCTTGATGAGATGGAGGACAATGGAGTGAAACCCTGTGTCATTTCATTCAACACCCTGCTTCGTGCTTTTTATGACAAGGGGGAGTTTGATGAAGGAGACAAGATATGGGAAAGGATGATAAAAAGTGGTGTAGCTCCTAGTATACTTAGTTACGATTTCAAGCTGCAAAGACTTGTTAATGATGGGAAGATTTCCAAAGCAATGGACATGGTTATGGAACTGAAAAGTAAAGGACTGAATCCTCATGTGGGAACTTACAATGCTTTTATTGTAGGAGCGTGTAAGAAGGGCGATTTGGATGGTGTAAGGCGGTGGTATAACGAGCTGTTGAGCCATGGTTGTGCACCGAACAAGGTGACTTTCAATAGCATTGTTCCGTTTCTGTGTGATAAGGGTGATTATGGATTGGTTTATCAGGTTTGTAGGAGGATGTTTAAGAGGCAGTGCTCGGTTGATCAGTGTTTGTTGCAGAAGGTAGTTGATGCATTGGCAAAGAAGTCGATGATGGAAGAAGCGAAAATTCTTGTGGCACTAGGAAAGGCTAATAGCTATTTTCCTTATGATCTTGAACTGCCTACAGGTTTTACGCGATATTTGACTTATTTACGTTGACCCCATTGATGCTAATAAGGCGAATTCTGCTTTTAACTGATATGGAGTAAAGATTATGTGAGGTTTTCGGTGGGAAATAGTTGCAGGTTTTTTGTTCCTTTGCTTTTTGCGACTGTGTATGACCAAAACTTTTAGCAGAACAAATTTCTGGTGTTTTTTTTGTAGTGTAAAGATGATATAGCGAACCACTGCAGACGCGCTACACATATTAGCATGTCGCCTTTCAATCTTTCATGGTGA

mRNA sequence

ATGTCCAACTCTTGCGCTCGTCTCAGTAGCTTATTTTCCAGAAATGCAACCAACACCATTAAATCAAAACTACCCCAAATCCAAACCCCTAAATCCATAAAAGAGAAACCATTGATAACCCTAGTCAAGAATCGAGCAGTTAGCAATGGTGTTAGTGTTAAAGACCTCATGGATGAGAGAGACTCCCAAAAACTCGTTGAAAAGTTCAACTCACTTTCTCAGCAAAAGGATTTCAGGAGCAAGTATAAAATCTACGATTACACAATTCGTCGTCTTGCTCTCGCAAATCAGTCTACGTTAATTAAAGAGGTGCTAGAATCCCAGAAGAAATACATTAACGGGGAAGGATTTGCTTCACGGATTATATTTCTGTATGGGAAAGCAGGTTTGTTTGATCATGCACAGAAGCTGTTCGACGAATTGCCTGAACGAGGTTGTGAACAAGGGGCCAGATCTTTTAACGCCCTTTTAGGGGCTGCTTCTTATTTGGAGGATTTTGATAAAGTTCACAAACTTTTTCGTGAGTTGCCATTGAAGTTATCGATTAAGCCAATTACTGGGTCTTATAACATAGCTGCTAATGCGCTCTGTAAACTCGGGTTGATTGATAAGGCTGCAGCATTGCTTGATGAGATGGAGGACAATGGAGTGAAACCCTGTGTCATTTCATTCAACACCCTGCTTCGTGCTTTTTATGACAAGGGGGAGTTTGATGAAGGAGACAAGATATGGGAAAGGATGATAAAAAGTGGTGTAGCTCCTAGTATACTTAGTTACGATTTCAAGCTGCAAAGACTTGTTAATGATGGGAAGATTTCCAAAGCAATGGACATGGTTATGGAACTGAAAAGTAAAGGACTGAATCCTCATGTGGGAACTTACAATGCTTTTATTGTAGGAGCGTGTAAGAAGGGCGATTTGGATGGTGTAAGGCGGTGGTATAACGAGCTGTTGAGCCATGGTTGTGCACCGAACAAGGTGACTTTCAATAGCATTGTTCCGTTTCTGTGTGATAAGGGTGATTATGGATTGGTTTATCAGGTTTGTAGGAGGATGTTTAAGAGGCAGTGCTCGGTTGATCAGTGTTTGTTGCAGAAGGTAGTTGATGCATTGGCAAAGAAGTCGATGATGGAAGAAGCGAAAATTCTTGTGGCACTAGGAAAGGCTAATAGCTATTTTCCTTATGATCTTGAACTGCCTACAGATGATATAGCGAACCACTGCAGACGCGCTACACATATTAGCATGTCGCCTTTCAATCTTTCATGGTGA

Coding sequence (CDS)

ATGTCCAACTCTTGCGCTCGTCTCAGTAGCTTATTTTCCAGAAATGCAACCAACACCATTAAATCAAAACTACCCCAAATCCAAACCCCTAAATCCATAAAAGAGAAACCATTGATAACCCTAGTCAAGAATCGAGCAGTTAGCAATGGTGTTAGTGTTAAAGACCTCATGGATGAGAGAGACTCCCAAAAACTCGTTGAAAAGTTCAACTCACTTTCTCAGCAAAAGGATTTCAGGAGCAAGTATAAAATCTACGATTACACAATTCGTCGTCTTGCTCTCGCAAATCAGTCTACGTTAATTAAAGAGGTGCTAGAATCCCAGAAGAAATACATTAACGGGGAAGGATTTGCTTCACGGATTATATTTCTGTATGGGAAAGCAGGTTTGTTTGATCATGCACAGAAGCTGTTCGACGAATTGCCTGAACGAGGTTGTGAACAAGGGGCCAGATCTTTTAACGCCCTTTTAGGGGCTGCTTCTTATTTGGAGGATTTTGATAAAGTTCACAAACTTTTTCGTGAGTTGCCATTGAAGTTATCGATTAAGCCAATTACTGGGTCTTATAACATAGCTGCTAATGCGCTCTGTAAACTCGGGTTGATTGATAAGGCTGCAGCATTGCTTGATGAGATGGAGGACAATGGAGTGAAACCCTGTGTCATTTCATTCAACACCCTGCTTCGTGCTTTTTATGACAAGGGGGAGTTTGATGAAGGAGACAAGATATGGGAAAGGATGATAAAAAGTGGTGTAGCTCCTAGTATACTTAGTTACGATTTCAAGCTGCAAAGACTTGTTAATGATGGGAAGATTTCCAAAGCAATGGACATGGTTATGGAACTGAAAAGTAAAGGACTGAATCCTCATGTGGGAACTTACAATGCTTTTATTGTAGGAGCGTGTAAGAAGGGCGATTTGGATGGTGTAAGGCGGTGGTATAACGAGCTGTTGAGCCATGGTTGTGCACCGAACAAGGTGACTTTCAATAGCATTGTTCCGTTTCTGTGTGATAAGGGTGATTATGGATTGGTTTATCAGGTTTGTAGGAGGATGTTTAAGAGGCAGTGCTCGGTTGATCAGTGTTTGTTGCAGAAGGTAGTTGATGCATTGGCAAAGAAGTCGATGATGGAAGAAGCGAAAATTCTTGTGGCACTAGGAAAGGCTAATAGCTATTTTCCTTATGATCTTGAACTGCCTACAGATGATATAGCGAACCACTGCAGACGCGCTACACATATTAGCATGTCGCCTTTCAATCTTTCATGGTGA

Protein sequence

MSNSCARLSSLFSRNATNTIKSKLPQIQTPKSIKEKPLITLVKNRAVSNGVSVKDLMDERDSQKLVEKFNSLSQQKDFRSKYKIYDYTIRRLALANQSTLIKEVLESQKKYINGEGFASRIIFLYGKAGLFDHAQKLFDELPERGCEQGARSFNALLGAASYLEDFDKVHKLFRELPLKLSIKPITGSYNIAANALCKLGLIDKAAALLDEMEDNGVKPCVISFNTLLRAFYDKGEFDEGDKIWERMIKSGVAPSILSYDFKLQRLVNDGKISKAMDMVMELKSKGLNPHVGTYNAFIVGACKKGDLDGVRRWYNELLSHGCAPNKVTFNSIVPFLCDKGDYGLVYQVCRRMFKRQCSVDQCLLQKVVDALAKKSMMEEAKILVALGKANSYFPYDLELPTDDIANHCRRATHISMSPFNLSW
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo03108.1Spo03108.1mRNA


Homology
BLAST of Spo03108.1 vs. NCBI nr
Match: gi|902184085|gb|KNA10241.1| (hypothetical protein SOVF_146030 [Spinacia oleracea])

HSP 1 Score: 799.3 bits (2063), Expect = 3.300e-228
Identity = 401/401 (100.00%), Postives = 401/401 (100.00%), Query Frame = 1

		  

Query: 1   MSNSCARLSSLFSRNATNTIKSKLPQIQTPKSIKEKPLITLVKNRAVSNGVSVKDLMDER 60
           MSNSCARLSSLFSRNATNTIKSKLPQIQTPKSIKEKPLITLVKNRAVSNGVSVKDLMDER
Sbjct: 1   MSNSCARLSSLFSRNATNTIKSKLPQIQTPKSIKEKPLITLVKNRAVSNGVSVKDLMDER 60

Query: 61  DSQKLVEKFNSLSQQKDFRSKYKIYDYTIRRLALANQSTLIKEVLESQKKYINGEGFASR 120
           DSQKLVEKFNSLSQQKDFRSKYKIYDYTIRRLALANQSTLIKEVLESQKKYINGEGFASR
Sbjct: 61  DSQKLVEKFNSLSQQKDFRSKYKIYDYTIRRLALANQSTLIKEVLESQKKYINGEGFASR 120

Query: 121 IIFLYGKAGLFDHAQKLFDELPERGCEQGARSFNALLGAASYLEDFDKVHKLFRELPLKL 180
           IIFLYGKAGLFDHAQKLFDELPERGCEQGARSFNALLGAASYLEDFDKVHKLFRELPLKL
Sbjct: 121 IIFLYGKAGLFDHAQKLFDELPERGCEQGARSFNALLGAASYLEDFDKVHKLFRELPLKL 180

Query: 181 SIKPITGSYNIAANALCKLGLIDKAAALLDEMEDNGVKPCVISFNTLLRAFYDKGEFDEG 240
           SIKPITGSYNIAANALCKLGLIDKAAALLDEMEDNGVKPCVISFNTLLRAFYDKGEFDEG
Sbjct: 181 SIKPITGSYNIAANALCKLGLIDKAAALLDEMEDNGVKPCVISFNTLLRAFYDKGEFDEG 240

Query: 241 DKIWERMIKSGVAPSILSYDFKLQRLVNDGKISKAMDMVMELKSKGLNPHVGTYNAFIVG 300
           DKIWERMIKSGVAPSILSYDFKLQRLVNDGKISKAMDMVMELKSKGLNPHVGTYNAFIVG
Sbjct: 241 DKIWERMIKSGVAPSILSYDFKLQRLVNDGKISKAMDMVMELKSKGLNPHVGTYNAFIVG 300

Query: 301 ACKKGDLDGVRRWYNELLSHGCAPNKVTFNSIVPFLCDKGDYGLVYQVCRRMFKRQCSVD 360
           ACKKGDLDGVRRWYNELLSHGCAPNKVTFNSIVPFLCDKGDYGLVYQVCRRMFKRQCSVD
Sbjct: 301 ACKKGDLDGVRRWYNELLSHGCAPNKVTFNSIVPFLCDKGDYGLVYQVCRRMFKRQCSVD 360

Query: 361 QCLLQKVVDALAKKSMMEEAKILVALGKANSYFPYDLELPT 402
           QCLLQKVVDALAKKSMMEEAKILVALGKANSYFPYDLELPT
Sbjct: 361 QCLLQKVVDALAKKSMMEEAKILVALGKANSYFPYDLELPT 401

BLAST of Spo03108.1 vs. NCBI nr
Match: gi|902184084|gb|KNA10240.1| (hypothetical protein SOVF_146020 [Spinacia oleracea])

HSP 1 Score: 528.5 bits (1360), Expect = 1.100e-146
Identity = 267/409 (65.28%), Postives = 325/409 (79.46%), Query Frame = 1

		  

Query: 2   SNSCARLSSLFS--RNATNTIKSKLPQ-IQTPKSIKEKPLITLVKNRAVSNGVSVKDLMD 61
           SN   RL SLFS  RNA N+IKS  P+  +T KS+      T  K + ++ G+  KDL+D
Sbjct: 4   SNVYTRLHSLFSSTRNAANSIKSTHPKPTETTKSL------TSAKRKEINLGI--KDLLD 63

Query: 62  ERDSQKLVEKFNSLSQQKDFRSKYKIYDYTIRRLALANQSTLIKEVLESQKKYINGEGFA 121
           E+DSQKLV+KF  LSQ+K FR ++KIY+ TI RLALANQ+TLI++ LESQKKYI GE FA
Sbjct: 64  EKDSQKLVQKFKLLSQEKYFRQRHKIYENTIHRLALANQNTLIEDALESQKKYIIGEPFA 123

Query: 122 SRIIFLYGKAGLFDHAQKLFDELPERGCEQGARSFNALLGAASYLEDFDKVHKLFRELPL 181
           +RIIFLYGKAGLF+HA K+FDELP+ GC+QG +SFN LLGAAS  E +DKV++LFRELP 
Sbjct: 124 ARIIFLYGKAGLFEHAHKVFDELPQLGCQQGFKSFNVLLGAASNSEKYDKVYELFRELPK 183

Query: 182 KLSIKPITGSYNIAANALCKLGLIDKAAALLDEMEDNGVKPCVISFNTLLRAFYDKGEFD 241
           KLSIKP    YN AA+ALCKLGLID A +L+ EME NG+ P V+S NTLL A Y+K  F+
Sbjct: 184 KLSIKPSVHCYNTAAHALCKLGLIDDAVSLISEMEMNGLNPSVVSLNTLLGAVYEKKGFE 243

Query: 242 EGDKIWERMIKSGVAPSILSYDFKLQRLVNDGKISKAMDMVMELKSKGLNPHVGTYNAFI 301
           EG+K+WE MI+ GV P +LSY+FKLQRLVNDGK+SKAM+++MEL+SK ++P VGTYN  I
Sbjct: 244 EGEKVWESMIEKGVVPDVLSYNFKLQRLVNDGKLSKAMELIMELESKEISPDVGTYNGLI 303

Query: 302 VGACKKGDLDGVRRWYNELLSHGCAPNKVTFNSIVPFLCDKGDYGLVYQVCRRMFKRQCS 361
           +GACK  DLD VRRWY ELL+ G  PNKVTFN+++PFLC+ GD+GL YQVC+RMF+ QCS
Sbjct: 304 LGACKNNDLDEVRRWYKELLNSGIFPNKVTFNTVIPFLCENGDFGLAYQVCKRMFRHQCS 363

Query: 362 VDQCLLQKVVDALAKKSMMEEAKILVALGKANSYFPYDLELPTDDIANH 408
           VDQ LLQKV + LAKKSMMEEAKILV LGK+NSYFPYDLELPT  I  +
Sbjct: 364 VDQSLLQKVANGLAKKSMMEEAKILVGLGKSNSYFPYDLELPTTGIMRY 404

BLAST of Spo03108.1 vs. NCBI nr
Match: gi|731351183|ref|XP_010686906.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g55890, mitochondrial-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 521.5 bits (1342), Expect = 1.300e-144
Identity = 261/406 (64.29%), Postives = 326/406 (80.30%), Query Frame = 1

		  

Query: 1   MSNSCARLSSLFS--RNATNTIKSKLPQIQTPKSIKEKPLITLVKNRAVSNGVSVKDLMD 60
           MSN   RL  LFS  RN+ N+IKSKLPQIQ PK  K  P I    N  ++ GV  K+L+D
Sbjct: 1   MSNVYTRLHCLFSSNRNSANSIKSKLPQIQNPKPTKSTPNI----NADINQGV--KELLD 60

Query: 61  ERDSQKLVEKFNSLSQQKDFRSKYKIYDYTIRRLALANQSTLIKEVLESQKKYINGEGFA 120
           ERDS+KLVEKF SLS+ K FR+K++IY   I RL L+ Q +LI+ +LESQK YI+GE FA
Sbjct: 61  ERDSKKLVEKFTSLSEHKYFRTKHRIYGNIIHRLTLSKQLSLIEYLLESQKIYISGEAFA 120

Query: 121 SRIIFLYGKAGLFDHAQKLFDELPERGCEQGARSFNALLGAASYLEDFDKVHKLFRELPL 180
           +RIIFLYGKAGLF+HA KLFDELP+RG EQ  R+F+ALLGA     +FDKV++LF+E+P+
Sbjct: 121 ARIIFLYGKAGLFEHAHKLFDELPDRGFEQSDRTFSALLGAGCNSGNFDKVYELFQEVPV 180

Query: 181 KLSIKPITGSYNIAANALCKLGLIDKAAALLDEMEDNGVKPCVISFNTLLRAFYDKGEFD 240
           KL+IK    SYN A +ALCKLGL D A ALLD ME+ G+KP V S NT+L AFY+KGEF+
Sbjct: 181 KLAIKLSMDSYNAALHALCKLGLFDDAVALLDVMEEKGLKPSVCSLNTVLGAFYEKGEFE 240

Query: 241 EGDKIWERMIKSGVAPSILSYDFKLQRLVNDGKISKAMDMVMELKSKGLNPHVGTYNAFI 300
           +G+KIWERMI SGV P ++SY+FKLQ+LV++GKIS+AM+++MEL+SKGLNP+VGTYNA I
Sbjct: 241 KGEKIWERMIGSGVVPDMISYNFKLQKLVSEGKISEAMELIMELESKGLNPNVGTYNALI 300

Query: 301 VGACKKGDLDGVRRWYNELLSHGCAPNKVTFNSIVPFLCDKGDYGLVYQVCRRMFKRQCS 360
           +G+CK  DLDGVRRWY EL+S GC PN+VTF++IVPFLCDKGDY L +QVC+RMF+RQCS
Sbjct: 301 IGSCKHDDLDGVRRWYTELMSRGCIPNRVTFHTIVPFLCDKGDYSLAFQVCKRMFRRQCS 360

Query: 361 VDQCLLQKVVDALAKKSMMEEAKILVALGKANSYFPYDLELPTDDI 405
           VD+ LLQKVVD LAK SM++EA ILV LG++NS+FPY+L LP   +
Sbjct: 361 VDKSLLQKVVDGLAKNSMIDEANILVGLGRSNSFFPYNLVLPNQGV 400

BLAST of Spo03108.1 vs. NCBI nr
Match: gi|697152506|ref|XP_009630488.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g13160, mitochondrial-like [Nicotiana tomentosiformis])

HSP 1 Score: 348.6 bits (893), Expect = 1.500e-92
Identity = 176/367 (47.96%), Postives = 246/367 (67.03%), Query Frame = 1

		  

Query: 40  TLVKNRAVSNGVSVKDLMDERDSQKLVEKFNSLSQQKDFRSKYKIYDYTIRRLALANQST 99
           TL   RA+S+     DL  ER+ ++LVEKF   S    FR+K  IY+ T++RLA A +  
Sbjct: 19  TLSPIRAISD-----DLYKERNLKRLVEKFKQYSDVNRFRTKNGIYESTVQRLASAKKFK 78

Query: 100 LIKEVLESQKKY---INGEGFASRIIFLYGKAGLFDHAQKLFDELPERGCEQGARSFNAL 159
            I+E+LE QK+Y   I+ E FA+R++ LYGK GLF+HAQK+FDE+PER C+Q  +S NAL
Sbjct: 79  WIEEILEHQKQYRLDISKESFAARLVSLYGKCGLFEHAQKVFDEMPERNCKQTLKSVNAL 138

Query: 160 LGAASYLEDFDKVHKLFRELPLKLSIKPITGSYNIAANALCKLGLIDKAAALLDEMEDNG 219
           LGA    + +D++  LF+ELP KL +KP   +YNI    LC  G +DKAAAL+DE+E NG
Sbjct: 139 LGACVNSQKYDELETLFKELPEKLKVKPDVVTYNIMIKGLCDKGTLDKAAALIDEIEKNG 198

Query: 220 VKPCVISFNTLLRAFYDKGEFDEGDKIWERMIKSGVAPSILSYDFKLQRLVNDGKISKAM 279
           +KP +++FNT+L AFY  G+FD G+K W+ M+   V P I SY+ KL  L+N+ K+S+A 
Sbjct: 199 LKPDLVTFNTILGAFYCTGKFDAGEKTWKLMVSKNVIPDIRSYNAKLVGLINNSKVSEAA 258

Query: 280 DMVMELKSKGLNPHVGTYNAFIVGACKKGDLDGVRRWYNELLSHGCAPNKVTFNSIVPFL 339
            +V +L S  L P V TY   I G C KG+L+  ++WY EL+  G +PNKV F S++   
Sbjct: 259 KLVGDLGSFELKPDVFTYGTLIRGYCDKGNLEEAKKWYLELVKSGSSPNKVIFGSVITAA 318

Query: 340 CDKGDYGLVYQVCRRMFKRQCSVDQCLLQKVVDALAKKSMMEEAKILVALGKANSYFPYD 399
           C+KGD+   +++C+ +FK +C VD  LLQ VVD + K S + EAK +V LGK+N Y  Y 
Sbjct: 319 CEKGDFDWAFELCKDVFKNKCHVDAELLQGVVDGMVKSSRIWEAKEVVRLGKSNDYHLYK 378

Query: 400 LELPTDD 404
           L+LP+DD
Sbjct: 379 LKLPSDD 380

BLAST of Spo03108.1 vs. NCBI nr
Match: gi|565352696|ref|XP_006343276.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g55890, mitochondrial-like [Solanum tuberosum])

HSP 1 Score: 344.0 bits (881), Expect = 3.800e-91
Identity = 170/352 (48.30%), Postives = 236/352 (67.05%), Query Frame = 1

		  

Query: 55  DLMDERDSQKLVEKFNSLSQQKDFRSKYKIYDYTIRRLALANQSTLIKEVLESQKKY--- 114
           DL  ER+ ++LVEKF   S    FR+K  IY+ T+ RLA A +   I+E+LE QK+Y   
Sbjct: 28  DLYKERNLKRLVEKFKQYSDVTRFRTKTGIYESTVHRLASAKRYKWIEEILEHQKQYRPD 87

Query: 115 INGEGFASRIIFLYGKAGLFDHAQKLFDELPERGCEQGARSFNALLGAASYLEDFDKVHK 174
           I+ E FA+R++ LYGK+GLF++AQK+FDE+PER C+Q  +S NALLGA    + +DK+  
Sbjct: 88  ISKESFAARLVSLYGKSGLFENAQKVFDEMPERNCKQSVKSVNALLGACVNSQKYDKLEG 147

Query: 175 LFRELPLKLSIKPITGSYNIAANALCKLGLIDKAAALLDEMEDNGVKPCVISFNTLLRAF 234
           LF EL  KL +KP   +YNI    LC  G +DKAAA +DE+E NG+KP +++FNT+L  F
Sbjct: 148 LFEELLEKLKVKPDVVTYNIMIKGLCDKGELDKAAAFVDEIEKNGLKPDLVTFNTILGVF 207

Query: 235 YDKGEFDEGDKIWERMIKSGVAPSILSYDFKLQRLVNDGKISKAMDMVMELKSKGLNPHV 294
           Y  G+FD+G+K+W+ M+   V P I SY+ KL  L+N+ K+S+A  +V EL S  L P V
Sbjct: 208 YSNGKFDDGEKMWKLMVSKNVVPDIRSYNAKLVGLMNENKVSEAAKLVGELGSFELKPDV 267

Query: 295 GTYNAFIVGACKKGDLDGVRRWYNELLSHGCAPNKVTFNSIVPFLCDKGDYGLVYQVCRR 354
            TY A I G CK  +L+  ++WY EL+    APNKV F S++   C+KGD+    ++C+ 
Sbjct: 268 FTYGALIRGFCKMSNLEEAKKWYEELVKSSSAPNKVIFASVISSACEKGDFDWALELCKE 327

Query: 355 MFKRQCSVDQCLLQKVVDALAKKSMMEEAKILVALGKANSYFPYDLELPTDD 404
           +FKR+C+VD  LLQ+VVD L   S + EAK +V LGK+N Y  Y L LP+DD
Sbjct: 328 VFKRKCNVDAKLLQRVVDGLVSSSRIREAKEVVHLGKSNDYHLYKLNLPSDD 379

BLAST of Spo03108.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QUS7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_146030 PE=4 SV=1)

HSP 1 Score: 799.3 bits (2063), Expect = 2.300e-228
Identity = 401/401 (100.00%), Postives = 401/401 (100.00%), Query Frame = 1

		  

Query: 1   MSNSCARLSSLFSRNATNTIKSKLPQIQTPKSIKEKPLITLVKNRAVSNGVSVKDLMDER 60
           MSNSCARLSSLFSRNATNTIKSKLPQIQTPKSIKEKPLITLVKNRAVSNGVSVKDLMDER
Sbjct: 1   MSNSCARLSSLFSRNATNTIKSKLPQIQTPKSIKEKPLITLVKNRAVSNGVSVKDLMDER 60

Query: 61  DSQKLVEKFNSLSQQKDFRSKYKIYDYTIRRLALANQSTLIKEVLESQKKYINGEGFASR 120
           DSQKLVEKFNSLSQQKDFRSKYKIYDYTIRRLALANQSTLIKEVLESQKKYINGEGFASR
Sbjct: 61  DSQKLVEKFNSLSQQKDFRSKYKIYDYTIRRLALANQSTLIKEVLESQKKYINGEGFASR 120

Query: 121 IIFLYGKAGLFDHAQKLFDELPERGCEQGARSFNALLGAASYLEDFDKVHKLFRELPLKL 180
           IIFLYGKAGLFDHAQKLFDELPERGCEQGARSFNALLGAASYLEDFDKVHKLFRELPLKL
Sbjct: 121 IIFLYGKAGLFDHAQKLFDELPERGCEQGARSFNALLGAASYLEDFDKVHKLFRELPLKL 180

Query: 181 SIKPITGSYNIAANALCKLGLIDKAAALLDEMEDNGVKPCVISFNTLLRAFYDKGEFDEG 240
           SIKPITGSYNIAANALCKLGLIDKAAALLDEMEDNGVKPCVISFNTLLRAFYDKGEFDEG
Sbjct: 181 SIKPITGSYNIAANALCKLGLIDKAAALLDEMEDNGVKPCVISFNTLLRAFYDKGEFDEG 240

Query: 241 DKIWERMIKSGVAPSILSYDFKLQRLVNDGKISKAMDMVMELKSKGLNPHVGTYNAFIVG 300
           DKIWERMIKSGVAPSILSYDFKLQRLVNDGKISKAMDMVMELKSKGLNPHVGTYNAFIVG
Sbjct: 241 DKIWERMIKSGVAPSILSYDFKLQRLVNDGKISKAMDMVMELKSKGLNPHVGTYNAFIVG 300

Query: 301 ACKKGDLDGVRRWYNELLSHGCAPNKVTFNSIVPFLCDKGDYGLVYQVCRRMFKRQCSVD 360
           ACKKGDLDGVRRWYNELLSHGCAPNKVTFNSIVPFLCDKGDYGLVYQVCRRMFKRQCSVD
Sbjct: 301 ACKKGDLDGVRRWYNELLSHGCAPNKVTFNSIVPFLCDKGDYGLVYQVCRRMFKRQCSVD 360

Query: 361 QCLLQKVVDALAKKSMMEEAKILVALGKANSYFPYDLELPT 402
           QCLLQKVVDALAKKSMMEEAKILVALGKANSYFPYDLELPT
Sbjct: 361 QCLLQKVVDALAKKSMMEEAKILVALGKANSYFPYDLELPT 401

BLAST of Spo03108.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QSM1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_146020 PE=4 SV=1)

HSP 1 Score: 528.5 bits (1360), Expect = 7.600e-147
Identity = 267/409 (65.28%), Postives = 325/409 (79.46%), Query Frame = 1

		  

Query: 2   SNSCARLSSLFS--RNATNTIKSKLPQ-IQTPKSIKEKPLITLVKNRAVSNGVSVKDLMD 61
           SN   RL SLFS  RNA N+IKS  P+  +T KS+      T  K + ++ G+  KDL+D
Sbjct: 4   SNVYTRLHSLFSSTRNAANSIKSTHPKPTETTKSL------TSAKRKEINLGI--KDLLD 63

Query: 62  ERDSQKLVEKFNSLSQQKDFRSKYKIYDYTIRRLALANQSTLIKEVLESQKKYINGEGFA 121
           E+DSQKLV+KF  LSQ+K FR ++KIY+ TI RLALANQ+TLI++ LESQKKYI GE FA
Sbjct: 64  EKDSQKLVQKFKLLSQEKYFRQRHKIYENTIHRLALANQNTLIEDALESQKKYIIGEPFA 123

Query: 122 SRIIFLYGKAGLFDHAQKLFDELPERGCEQGARSFNALLGAASYLEDFDKVHKLFRELPL 181
           +RIIFLYGKAGLF+HA K+FDELP+ GC+QG +SFN LLGAAS  E +DKV++LFRELP 
Sbjct: 124 ARIIFLYGKAGLFEHAHKVFDELPQLGCQQGFKSFNVLLGAASNSEKYDKVYELFRELPK 183

Query: 182 KLSIKPITGSYNIAANALCKLGLIDKAAALLDEMEDNGVKPCVISFNTLLRAFYDKGEFD 241
           KLSIKP    YN AA+ALCKLGLID A +L+ EME NG+ P V+S NTLL A Y+K  F+
Sbjct: 184 KLSIKPSVHCYNTAAHALCKLGLIDDAVSLISEMEMNGLNPSVVSLNTLLGAVYEKKGFE 243

Query: 242 EGDKIWERMIKSGVAPSILSYDFKLQRLVNDGKISKAMDMVMELKSKGLNPHVGTYNAFI 301
           EG+K+WE MI+ GV P +LSY+FKLQRLVNDGK+SKAM+++MEL+SK ++P VGTYN  I
Sbjct: 244 EGEKVWESMIEKGVVPDVLSYNFKLQRLVNDGKLSKAMELIMELESKEISPDVGTYNGLI 303

Query: 302 VGACKKGDLDGVRRWYNELLSHGCAPNKVTFNSIVPFLCDKGDYGLVYQVCRRMFKRQCS 361
           +GACK  DLD VRRWY ELL+ G  PNKVTFN+++PFLC+ GD+GL YQVC+RMF+ QCS
Sbjct: 304 LGACKNNDLDEVRRWYKELLNSGIFPNKVTFNTVIPFLCENGDFGLAYQVCKRMFRHQCS 363

Query: 362 VDQCLLQKVVDALAKKSMMEEAKILVALGKANSYFPYDLELPTDDIANH 408
           VDQ LLQKV + LAKKSMMEEAKILV LGK+NSYFPYDLELPT  I  +
Sbjct: 364 VDQSLLQKVANGLAKKSMMEEAKILVGLGKSNSYFPYDLELPTTGIMRY 404

BLAST of Spo03108.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BVP6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g186460 PE=4 SV=1)

HSP 1 Score: 521.5 bits (1342), Expect = 9.300e-145
Identity = 261/406 (64.29%), Postives = 326/406 (80.30%), Query Frame = 1

		  

Query: 1   MSNSCARLSSLFS--RNATNTIKSKLPQIQTPKSIKEKPLITLVKNRAVSNGVSVKDLMD 60
           MSN   RL  LFS  RN+ N+IKSKLPQIQ PK  K  P I    N  ++ GV  K+L+D
Sbjct: 1   MSNVYTRLHCLFSSNRNSANSIKSKLPQIQNPKPTKSTPNI----NADINQGV--KELLD 60

Query: 61  ERDSQKLVEKFNSLSQQKDFRSKYKIYDYTIRRLALANQSTLIKEVLESQKKYINGEGFA 120
           ERDS+KLVEKF SLS+ K FR+K++IY   I RL L+ Q +LI+ +LESQK YI+GE FA
Sbjct: 61  ERDSKKLVEKFTSLSEHKYFRTKHRIYGNIIHRLTLSKQLSLIEYLLESQKIYISGEAFA 120

Query: 121 SRIIFLYGKAGLFDHAQKLFDELPERGCEQGARSFNALLGAASYLEDFDKVHKLFRELPL 180
           +RIIFLYGKAGLF+HA KLFDELP+RG EQ  R+F+ALLGA     +FDKV++LF+E+P+
Sbjct: 121 ARIIFLYGKAGLFEHAHKLFDELPDRGFEQSDRTFSALLGAGCNSGNFDKVYELFQEVPV 180

Query: 181 KLSIKPITGSYNIAANALCKLGLIDKAAALLDEMEDNGVKPCVISFNTLLRAFYDKGEFD 240
           KL+IK    SYN A +ALCKLGL D A ALLD ME+ G+KP V S NT+L AFY+KGEF+
Sbjct: 181 KLAIKLSMDSYNAALHALCKLGLFDDAVALLDVMEEKGLKPSVCSLNTVLGAFYEKGEFE 240

Query: 241 EGDKIWERMIKSGVAPSILSYDFKLQRLVNDGKISKAMDMVMELKSKGLNPHVGTYNAFI 300
           +G+KIWERMI SGV P ++SY+FKLQ+LV++GKIS+AM+++MEL+SKGLNP+VGTYNA I
Sbjct: 241 KGEKIWERMIGSGVVPDMISYNFKLQKLVSEGKISEAMELIMELESKGLNPNVGTYNALI 300

Query: 301 VGACKKGDLDGVRRWYNELLSHGCAPNKVTFNSIVPFLCDKGDYGLVYQVCRRMFKRQCS 360
           +G+CK  DLDGVRRWY EL+S GC PN+VTF++IVPFLCDKGDY L +QVC+RMF+RQCS
Sbjct: 301 IGSCKHDDLDGVRRWYTELMSRGCIPNRVTFHTIVPFLCDKGDYSLAFQVCKRMFRRQCS 360

Query: 361 VDQCLLQKVVDALAKKSMMEEAKILVALGKANSYFPYDLELPTDDI 405
           VD+ LLQKVVD LAK SM++EA ILV LG++NS+FPY+L LP   +
Sbjct: 361 VDKSLLQKVVDGLAKNSMIDEANILVGLGRSNSFFPYNLVLPNQGV 400

BLAST of Spo03108.1 vs. UniProtKB/TrEMBL
Match: A0A0V0HZU8_SOLCH (Putative pentatricopeptide repeat-containing protein, mitochondrial-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 3.100e-92
Identity = 171/352 (48.58%), Postives = 237/352 (67.33%), Query Frame = 1

		  

Query: 55  DLMDERDSQKLVEKFNSLSQQKDFRSKYKIYDYTIRRLALANQSTLIKEVLESQKKY--- 114
           DL  ER+ ++LVEKF   S    FR+K  IY+ T+ RLA A +   I+E+LE QK+Y   
Sbjct: 28  DLYKERNLKRLVEKFKQYSDVTRFRTKTGIYESTVHRLASAKRYKWIEEILEHQKQYRPD 87

Query: 115 INGEGFASRIIFLYGKAGLFDHAQKLFDELPERGCEQGARSFNALLGAASYLEDFDKVHK 174
           I+ E FA+R++ LYGK+GLF++AQK+FDE+PER C+Q  +S NALLGA    + +DK+  
Sbjct: 88  ISKESFAARLVSLYGKSGLFENAQKVFDEMPERNCKQSVKSVNALLGACXNSQKYDKLEG 147

Query: 175 LFRELPLKLSIKPITGSYNIAANALCKLGLIDKAAALLDEMEDNGVKPCVISFNTLLRAF 234
           LF EL  KL +KP   +YNI    LC  G +DKAAA +DE+E NG+KP +++FNT+L  F
Sbjct: 148 LFEELLEKLKVKPDVVTYNIMIKGLCDKGELDKAAAFVDEIEKNGLKPDLVTFNTILGVF 207

Query: 235 YDKGEFDEGDKIWERMIKSGVAPSILSYDFKLQRLVNDGKISKAMDMVMELKSKGLNPHV 294
           Y  G+FD+G+K+W+ M+   V P I SY+ KL  L+N+ K+S+A  +V EL S  L P V
Sbjct: 208 YSNGKFDDGEKMWKLMVSKNVVPDIRSYNAKLVGLMNENKVSEAAKLVGELGSFELKPDV 267

Query: 295 GTYNAFIVGACKKGDLDGVRRWYNELLSHGCAPNKVTFNSIVPFLCDKGDYGLVYQVCRR 354
            TY A I G CK  +L+  ++WY EL+  G APNKV F S++   C+KGD+    ++C+ 
Sbjct: 268 FTYGALIRGFCKMSNLEKAKKWYEELVKSGSAPNKVIFASVISSACEKGDFDYALELCKE 327

Query: 355 MFKRQCSVDQCLLQKVVDALAKKSMMEEAKILVALGKANSYFPYDLELPTDD 404
           +FKR+C+VD  LLQ+VVD L   S + EAK +V LGK+N Y  Y L LP+DD
Sbjct: 328 VFKRKCNVDAKLLQRVVDGLVSSSRIREAKEVVHLGKSNDYHLYKLNLPSDD 379

BLAST of Spo03108.1 vs. UniProtKB/TrEMBL
Match: M1A228_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400005048 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 2.600e-91
Identity = 170/352 (48.30%), Postives = 236/352 (67.05%), Query Frame = 1

		  

Query: 55  DLMDERDSQKLVEKFNSLSQQKDFRSKYKIYDYTIRRLALANQSTLIKEVLESQKKY--- 114
           DL  ER+ ++LVEKF   S    FR+K  IY+ T+ RLA A +   I+E+LE QK+Y   
Sbjct: 28  DLYKERNLKRLVEKFKQYSDVTRFRTKTGIYESTVHRLASAKRYKWIEEILEHQKQYRPD 87

Query: 115 INGEGFASRIIFLYGKAGLFDHAQKLFDELPERGCEQGARSFNALLGAASYLEDFDKVHK 174
           I+ E FA+R++ LYGK+GLF++AQK+FDE+PER C+Q  +S NALLGA    + +DK+  
Sbjct: 88  ISKESFAARLVSLYGKSGLFENAQKVFDEMPERNCKQSVKSVNALLGACVNSQKYDKLEG 147

Query: 175 LFRELPLKLSIKPITGSYNIAANALCKLGLIDKAAALLDEMEDNGVKPCVISFNTLLRAF 234
           LF EL  KL +KP   +YNI    LC  G +DKAAA +DE+E NG+KP +++FNT+L  F
Sbjct: 148 LFEELLEKLKVKPDVVTYNIMIKGLCDKGELDKAAAFVDEIEKNGLKPDLVTFNTILGVF 207

Query: 235 YDKGEFDEGDKIWERMIKSGVAPSILSYDFKLQRLVNDGKISKAMDMVMELKSKGLNPHV 294
           Y  G+FD+G+K+W+ M+   V P I SY+ KL  L+N+ K+S+A  +V EL S  L P V
Sbjct: 208 YSNGKFDDGEKMWKLMVSKNVVPDIRSYNAKLVGLMNENKVSEAAKLVGELGSFELKPDV 267

Query: 295 GTYNAFIVGACKKGDLDGVRRWYNELLSHGCAPNKVTFNSIVPFLCDKGDYGLVYQVCRR 354
            TY A I G CK  +L+  ++WY EL+    APNKV F S++   C+KGD+    ++C+ 
Sbjct: 268 FTYGALIRGFCKMSNLEEAKKWYEELVKSSSAPNKVIFASVISSACEKGDFDWALELCKE 327

Query: 355 MFKRQCSVDQCLLQKVVDALAKKSMMEEAKILVALGKANSYFPYDLELPTDD 404
           +FKR+C+VD  LLQ+VVD L   S + EAK +V LGK+N Y  Y L LP+DD
Sbjct: 328 VFKRKCNVDAKLLQRVVDGLVSSSRIREAKEVVHLGKSNDYHLYKLNLPSDD 379

BLAST of Spo03108.1 vs. ExPASy Swiss-Prot
Match: PPR82_ARATH (Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidopsis thaliana GN=At1g55890 PE=2 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 3.900e-80
Identity = 147/347 (42.36%), Postives = 224/347 (64.55%), Query Frame = 1

		  

Query: 59  ERDSQKLVEKFNSLSQQKDFRSKYKIYDYTIRRLALANQSTLIKEVLESQKKY--INGEG 118
           ER+ +++VEKF    + + FR+   +YD T+RRL  A +   ++E+LE QKKY  ++ EG
Sbjct: 51  ERNPKRIVEKFKKACESERFRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEG 110

Query: 119 FASRIIFLYGKAGLFDHAQKLFDELPERGCEQGARSFNALLGAASYLEDFDKVHKLFREL 178
           FA+RII LYGKAG+F++AQK+F+E+P R C++   SFNALL A    + FD V +LF EL
Sbjct: 111 FAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNEL 170

Query: 179 PLKLSIKPITGSYNIAANALCKLGLIDKAAALLDEMEDNGVKPCVISFNTLLRAFYDKGE 238
           P KLSIKP   SYN    ALC+   + +A ALLDE+E+ G+KP +++FNTLL + Y KG+
Sbjct: 171 PGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQ 230

Query: 239 FDEGDKIWERMIKSGVAPSILSYDFKLQRLVNDGKISKAMDMVMELKSKGLNPHVGTYNA 298
           F+ G++IW +M++  VA  I +Y+ +L  L N+ K  + +++  ELK+ GL P V ++NA
Sbjct: 231 FELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNA 290

Query: 299 FIVGACKKGDLDGVRRWYNELLSHGCAPNKVTFNSIVPFLCDKGDYGLVYQVCRRMFKRQ 358
            I G+  +G +D    WY E++ HG  P+K TF  ++P +C  GD+    ++ +  F ++
Sbjct: 291 MIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKR 350

Query: 359 CSVDQCLLQKVVDALAKKSMMEEAKILVALGKANSYFPYDLELPTDD 404
             V Q  LQ++VD L K S  EEA+ +V + K N +    L LP+ +
Sbjct: 351 YLVGQTTLQQLVDELVKGSKREEAEEIVKIAKTNDFLKLKLNLPSQE 397

BLAST of Spo03108.1 vs. ExPASy Swiss-Prot
Match: PP226_ARATH (Pentatricopeptide repeat-containing protein At3g13160, mitochondrial OS=Arabidopsis thaliana GN=At3g13160 PE=2 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 3.300e-79
Identity = 151/344 (43.90%), Postives = 212/344 (61.63%), Query Frame = 1

		  

Query: 58  DERDSQKLVEKFNSLSQQKDFRSKYKIYDYTIRRLALANQSTLIKEVLESQKKYIN--GE 117
           DERD + + EKF    Q + FR    +Y+ T+RRLA A +   ++E+LE Q KY N   E
Sbjct: 47  DERDPKFITEKFKKACQAEWFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKE 106

Query: 118 GFASRIIFLYGKAGLFDHAQKLFDELPERGCEQGARSFNALLGAASYLEDFDKVHKLFRE 177
           GF +RII LYG+ G+F++AQK+FDE+PER C++ A SFNALL A    + FD V  +F+E
Sbjct: 107 GFVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKE 166

Query: 178 LPLKLSIKPITGSYNIAANALCKLGLIDKAAALLDEMEDNGVKPCVISFNTLLRAFYDKG 237
           LP KLSI+P   SYN     LC  G   +A AL+DE+E+ G+KP  I+FN LL   Y KG
Sbjct: 167 LPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKG 226

Query: 238 EFDEGDKIWERMIKSGVAPSILSYDFKLQRLVNDGKISKAMDMVMELKSKGLNPHVGTYN 297
           +F+EG++IW RM++  V   I SY+ +L  L  + K  + + +  +LK   L P V T+ 
Sbjct: 227 KFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFT 286

Query: 298 AFIVGACKKGDLDGVRRWYNELLSHGCAPNKVTFNSIVPFLCDKGDYGLVYQVCRRMFKR 357
           A I G   +G LD    WY E+  +GC P K  FNS++P +C  GD    Y++C+ +F +
Sbjct: 287 AMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAK 346

Query: 358 QCSVDQCLLQKVVDALAKKSMMEEAKILVALGKANSYFPYDLEL 400
           +  VD+ +LQ+VVDAL K S  +EA+ +V L K N Y    L L
Sbjct: 347 RLLVDEAVLQEVVDALVKGSKQDEAEEIVELAKTNDYLQCKLRL 390

BLAST of Spo03108.1 vs. ExPASy Swiss-Prot
Match: PP225_ARATH (Pentatricopeptide repeat-containing protein At3g13150 OS=Arabidopsis thaliana GN=At3g13150 PE=2 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.100e-66
Identity = 148/398 (37.19%), Postives = 222/398 (55.78%), Query Frame = 1

		  

Query: 2   SNSCARLSSLFSRNATNTIKSKLPQIQTPKSIKEKPLITLVKNRAVSNGVSVKDLMDERD 61
           S+  +RL  +F  ++  T KS  P+ QT KS K    +          G S  D  D ++
Sbjct: 6   SSLYSRLHGIFKESSIATAKSAKPRSQT-KSTKFPSKLKASTASVGDGGQSSNDAKDSKN 65

Query: 62  SQ--KLVEKFNSLSQQKDFRSKYKIYDYTIRRLALANQSTLIKEVLESQKKY--INGEGF 121
           S+  + VEKF    + + FR  + +Y   IRRL  A + + I EVL+ QKK+  I  E F
Sbjct: 66  SKLTQKVEKFKRSCESESFRQVHGLYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDF 125

Query: 122 ASRIIFLYGKAGLFDHAQKLFDELPERGCEQGARSFNALLGAASYLEDFDKVHKLFRELP 181
             RI+ LYG +G+ +HA KLFDE+PE  CE+  +SFNALL A    +  D+  K F+ELP
Sbjct: 126 VIRIMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELP 185

Query: 182 LKLSIKPITGSYNIAANALCKLGLIDKAAALLDEMEDNGVKPCVISFNTLLRAFYDKGEF 241
            KL I P   +YN    ALC+ G +D   ++ +E+E NG +P +ISFNTLL  FY +  F
Sbjct: 186 EKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELF 245

Query: 242 DEGDKIWERMIKSGVAPSILSYDFKLQRLVNDGKISKAMDMVMELKSKGLNPHVGTYNAF 301
            EGD+IW+ M    ++P+I SY+ +++ L  + K + A++++  +K++G++P V TYNA 
Sbjct: 246 VEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNAL 305

Query: 302 IVGACKKGDLDGVRRWYNELLSHGCAPNKVTFNSIVPFLCDKGDYGLVYQVCRRMFKRQC 361
           I       +L+ V + YNE+   G  P+ VT+  ++P LC KGD     +V     K + 
Sbjct: 306 ITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKL 365

Query: 362 SVDQCLLQKVVDALAKKSMMEEAKILVALGKANSYFPY 396
                + + VV+ L     ++EA  LV  GK  SYF Y
Sbjct: 366 LSRPNMYKPVVERLMGAGKIDEATQLVKNGKLQSYFRY 402

BLAST of Spo03108.1 vs. ExPASy Swiss-Prot
Match: PP134_ARATH (Pentatricopeptide repeat-containing protein At1g80150, mitochondrial OS=Arabidopsis thaliana GN=At1g80150 PE=2 SV=2)

HSP 1 Score: 171.8 bits (434), Expect = 1.600e-41
Identity = 98/333 (29.43%), Postives = 169/333 (50.75%), Query Frame = 1

		  

Query: 56  LMDERDSQKLVEKFNSLSQQKDFRSKYKIYDYTIRRLALANQSTLIKEVLESQKKYING- 115
           L  ERD +KL   F + +  +        ++ T+ RLA A +   I+++LE QK    G 
Sbjct: 45  LKSERDPEKLYNLFKANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGR 104

Query: 116 -EGFASRIIFLYGKAGLFDHAQKLFDELPERGCEQGARSFNALLGAASYLEDFDKVHKLF 175
            EGF  RII LYGKAG+   A   F  +   GC++  +SFNA L   S+  D   + +  
Sbjct: 105 REGFIVRIIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFL 164

Query: 176 RELPLKLSIKPITGSYNIAANALCKLGLIDKAAALLDEMEDNGVKPCVISFNTLLRAFYD 235
            + P K  I     S+NIA  + C+LG++D A   + EME +G+ P V+++ TL+ A Y 
Sbjct: 165 HDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYK 224

Query: 236 KGEFDEGDKIWERMIKSGVAPSILSYDFKLQRLVNDGKISKAMDMVMELKSKGLNPHVGT 295
                 G+ +W  M+  G  P++ +++ ++Q LVN  +   A D+++ +    + P   T
Sbjct: 225 HERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSIT 284

Query: 296 YNAFIVGACKKGDLDGVRRWYNELLSHGCAPNKVTFNSIVPFLCDKGDYGLVYQVCRRMF 355
           YN  I G       D   R Y  +   G  PN   + +++ +LC  G++ L Y +C+   
Sbjct: 285 YNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCM 344

Query: 356 KRQCSVDQCLLQKVVDALAKKSMMEEAKILVAL 387
           +++   +   ++ ++  L KK  +++AK ++ L
Sbjct: 345 RKKWYPNLDTVEMLLKGLVKKGQLDQAKSIMEL 377

BLAST of Spo03108.1 vs. ExPASy Swiss-Prot
Match: PP352_ARATH (Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidopsis thaliana GN=At4g36680 PE=2 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.800e-40
Identity = 100/334 (29.94%), Postives = 173/334 (51.80%), Query Frame = 1

		  

Query: 56  LMDERDSQKLVEKFNSLSQQK--DFRSKYKIYDYTIRRLALANQSTLIKEVLESQKK--Y 115
           L  E D  K ++ + ++S        S+Y   + T+RRLA   + + I+ ++ES K    
Sbjct: 40  LRKEHDPDKALKIYANVSDHSASPVSSRYA-QELTVRRLAKCRRFSDIETLIESHKNDPK 99

Query: 116 INGEGFASRIIFLYGKAGLFDHAQKLFDELPERGCEQGARSFNALLGAASYLEDFDKVHK 175
           I  E F S +I  YG+A +F+HA + F+++ + G  + A SFNALL A  + ++FDKV +
Sbjct: 100 IKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQ 159

Query: 176 LFRELPLKLS-IKPITGSYNIAANALCKLGLIDKAAALLDEMEDNGVKPCVISFNTLLRA 235
           LF E+P + + I P   SY I   + C  G  +KA  ++ +M+  G++   I+F T+L +
Sbjct: 160 LFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSS 219

Query: 236 FYDKGEFDEGDKIWERMIKSGVAPSILSYDFKLQRLVNDGKISKAMDMVMELKSKGLNPH 295
            Y KGE +  D +W  M+K G      +Y+ ++     +    +  +++ E+ S GL P 
Sbjct: 220 LYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESP-ERVKELIEEMSSMGLKPD 279

Query: 296 VGTYNAFIVGACKKGDLDGVRRWYNELLSHGCAPNKVTFNSIVPFLCDKGDYGLVYQVCR 355
             +YN  +   C++G LD  ++ Y  L  + CAPN  TF +++  LC    Y   Y + +
Sbjct: 280 TISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFK 339

Query: 356 RMFKRQCSVDQCLLQKVVDALAKKSMMEEAKILV 385
           +        D   L+ +V  L +    ++AK L+
Sbjct: 340 KSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLI 371

BLAST of Spo03108.1 vs. TAIR (Arabidopsis)
Match: AT1G55890.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 300.1 bits (767), Expect = 2.200e-81
Identity = 147/347 (42.36%), Postives = 224/347 (64.55%), Query Frame = 1

		  

Query: 59  ERDSQKLVEKFNSLSQQKDFRSKYKIYDYTIRRLALANQSTLIKEVLESQKKY--INGEG 118
           ER+ +++VEKF    + + FR+   +YD T+RRL  A +   ++E+LE QKKY  ++ EG
Sbjct: 51  ERNPKRIVEKFKKACESERFRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEG 110

Query: 119 FASRIIFLYGKAGLFDHAQKLFDELPERGCEQGARSFNALLGAASYLEDFDKVHKLFREL 178
           FA+RII LYGKAG+F++AQK+F+E+P R C++   SFNALL A    + FD V +LF EL
Sbjct: 111 FAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNEL 170

Query: 179 PLKLSIKPITGSYNIAANALCKLGLIDKAAALLDEMEDNGVKPCVISFNTLLRAFYDKGE 238
           P KLSIKP   SYN    ALC+   + +A ALLDE+E+ G+KP +++FNTLL + Y KG+
Sbjct: 171 PGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQ 230

Query: 239 FDEGDKIWERMIKSGVAPSILSYDFKLQRLVNDGKISKAMDMVMELKSKGLNPHVGTYNA 298
           F+ G++IW +M++  VA  I +Y+ +L  L N+ K  + +++  ELK+ GL P V ++NA
Sbjct: 231 FELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNA 290

Query: 299 FIVGACKKGDLDGVRRWYNELLSHGCAPNKVTFNSIVPFLCDKGDYGLVYQVCRRMFKRQ 358
            I G+  +G +D    WY E++ HG  P+K TF  ++P +C  GD+    ++ +  F ++
Sbjct: 291 MIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKR 350

Query: 359 CSVDQCLLQKVVDALAKKSMMEEAKILVALGKANSYFPYDLELPTDD 404
             V Q  LQ++VD L K S  EEA+ +V + K N +    L LP+ +
Sbjct: 351 YLVGQTTLQQLVDELVKGSKREEAEEIVKIAKTNDFLKLKLNLPSQE 397

BLAST of Spo03108.1 vs. TAIR (Arabidopsis)
Match: AT3G13160.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 297.0 bits (759), Expect = 1.900e-80
Identity = 151/344 (43.90%), Postives = 212/344 (61.63%), Query Frame = 1

		  

Query: 58  DERDSQKLVEKFNSLSQQKDFRSKYKIYDYTIRRLALANQSTLIKEVLESQKKYIN--GE 117
           DERD + + EKF    Q + FR    +Y+ T+RRLA A +   ++E+LE Q KY N   E
Sbjct: 47  DERDPKFITEKFKKACQAEWFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKE 106

Query: 118 GFASRIIFLYGKAGLFDHAQKLFDELPERGCEQGARSFNALLGAASYLEDFDKVHKLFRE 177
           GF +RII LYG+ G+F++AQK+FDE+PER C++ A SFNALL A    + FD V  +F+E
Sbjct: 107 GFVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKE 166

Query: 178 LPLKLSIKPITGSYNIAANALCKLGLIDKAAALLDEMEDNGVKPCVISFNTLLRAFYDKG 237
           LP KLSI+P   SYN     LC  G   +A AL+DE+E+ G+KP  I+FN LL   Y KG
Sbjct: 167 LPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKG 226

Query: 238 EFDEGDKIWERMIKSGVAPSILSYDFKLQRLVNDGKISKAMDMVMELKSKGLNPHVGTYN 297
           +F+EG++IW RM++  V   I SY+ +L  L  + K  + + +  +LK   L P V T+ 
Sbjct: 227 KFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFT 286

Query: 298 AFIVGACKKGDLDGVRRWYNELLSHGCAPNKVTFNSIVPFLCDKGDYGLVYQVCRRMFKR 357
           A I G   +G LD    WY E+  +GC P K  FNS++P +C  GD    Y++C+ +F +
Sbjct: 287 AMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAK 346

Query: 358 QCSVDQCLLQKVVDALAKKSMMEEAKILVALGKANSYFPYDLEL 400
           +  VD+ +LQ+VVDAL K S  +EA+ +V L K N Y    L L
Sbjct: 347 RLLVDEAVLQEVVDALVKGSKQDEAEEIVELAKTNDYLQCKLRL 390

BLAST of Spo03108.1 vs. TAIR (Arabidopsis)
Match: AT3G13150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 255.4 bits (651), Expect = 6.300e-68
Identity = 148/398 (37.19%), Postives = 222/398 (55.78%), Query Frame = 1

		  

Query: 2   SNSCARLSSLFSRNATNTIKSKLPQIQTPKSIKEKPLITLVKNRAVSNGVSVKDLMDERD 61
           S+  +RL  +F  ++  T KS  P+ QT KS K    +          G S  D  D ++
Sbjct: 6   SSLYSRLHGIFKESSIATAKSAKPRSQT-KSTKFPSKLKASTASVGDGGQSSNDAKDSKN 65

Query: 62  SQ--KLVEKFNSLSQQKDFRSKYKIYDYTIRRLALANQSTLIKEVLESQKKY--INGEGF 121
           S+  + VEKF    + + FR  + +Y   IRRL  A + + I EVL+ QKK+  I  E F
Sbjct: 66  SKLTQKVEKFKRSCESESFRQVHGLYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDF 125

Query: 122 ASRIIFLYGKAGLFDHAQKLFDELPERGCEQGARSFNALLGAASYLEDFDKVHKLFRELP 181
             RI+ LYG +G+ +HA KLFDE+PE  CE+  +SFNALL A    +  D+  K F+ELP
Sbjct: 126 VIRIMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELP 185

Query: 182 LKLSIKPITGSYNIAANALCKLGLIDKAAALLDEMEDNGVKPCVISFNTLLRAFYDKGEF 241
            KL I P   +YN    ALC+ G +D   ++ +E+E NG +P +ISFNTLL  FY +  F
Sbjct: 186 EKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELF 245

Query: 242 DEGDKIWERMIKSGVAPSILSYDFKLQRLVNDGKISKAMDMVMELKSKGLNPHVGTYNAF 301
            EGD+IW+ M    ++P+I SY+ +++ L  + K + A++++  +K++G++P V TYNA 
Sbjct: 246 VEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNAL 305

Query: 302 IVGACKKGDLDGVRRWYNELLSHGCAPNKVTFNSIVPFLCDKGDYGLVYQVCRRMFKRQC 361
           I       +L+ V + YNE+   G  P+ VT+  ++P LC KGD     +V     K + 
Sbjct: 306 ITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKL 365

Query: 362 SVDQCLLQKVVDALAKKSMMEEAKILVALGKANSYFPY 396
                + + VV+ L     ++EA  LV  GK  SYF Y
Sbjct: 366 LSRPNMYKPVVERLMGAGKIDEATQLVKNGKLQSYFRY 402

BLAST of Spo03108.1 vs. TAIR (Arabidopsis)
Match: AT1G80150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 171.8 bits (434), Expect = 9.100e-43
Identity = 98/333 (29.43%), Postives = 169/333 (50.75%), Query Frame = 1

		  

Query: 56  LMDERDSQKLVEKFNSLSQQKDFRSKYKIYDYTIRRLALANQSTLIKEVLESQKKYING- 115
           L  ERD +KL   F + +  +        ++ T+ RLA A +   I+++LE QK    G 
Sbjct: 45  LKSERDPEKLYNLFKANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGR 104

Query: 116 -EGFASRIIFLYGKAGLFDHAQKLFDELPERGCEQGARSFNALLGAASYLEDFDKVHKLF 175
            EGF  RII LYGKAG+   A   F  +   GC++  +SFNA L   S+  D   + +  
Sbjct: 105 REGFIVRIIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFL 164

Query: 176 RELPLKLSIKPITGSYNIAANALCKLGLIDKAAALLDEMEDNGVKPCVISFNTLLRAFYD 235
            + P K  I     S+NIA  + C+LG++D A   + EME +G+ P V+++ TL+ A Y 
Sbjct: 165 HDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYK 224

Query: 236 KGEFDEGDKIWERMIKSGVAPSILSYDFKLQRLVNDGKISKAMDMVMELKSKGLNPHVGT 295
                 G+ +W  M+  G  P++ +++ ++Q LVN  +   A D+++ +    + P   T
Sbjct: 225 HERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSIT 284

Query: 296 YNAFIVGACKKGDLDGVRRWYNELLSHGCAPNKVTFNSIVPFLCDKGDYGLVYQVCRRMF 355
           YN  I G       D   R Y  +   G  PN   + +++ +LC  G++ L Y +C+   
Sbjct: 285 YNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCM 344

Query: 356 KRQCSVDQCLLQKVVDALAKKSMMEEAKILVAL 387
           +++   +   ++ ++  L KK  +++AK ++ L
Sbjct: 345 RKKWYPNLDTVEMLLKGLVKKGQLDQAKSIMEL 377

BLAST of Spo03108.1 vs. TAIR (Arabidopsis)
Match: AT4G36680.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 168.3 bits (425), Expect = 1.000e-41
Identity = 100/334 (29.94%), Postives = 173/334 (51.80%), Query Frame = 1

		  

Query: 56  LMDERDSQKLVEKFNSLSQQK--DFRSKYKIYDYTIRRLALANQSTLIKEVLESQKK--Y 115
           L  E D  K ++ + ++S        S+Y   + T+RRLA   + + I+ ++ES K    
Sbjct: 40  LRKEHDPDKALKIYANVSDHSASPVSSRYA-QELTVRRLAKCRRFSDIETLIESHKNDPK 99

Query: 116 INGEGFASRIIFLYGKAGLFDHAQKLFDELPERGCEQGARSFNALLGAASYLEDFDKVHK 175
           I  E F S +I  YG+A +F+HA + F+++ + G  + A SFNALL A  + ++FDKV +
Sbjct: 100 IKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQ 159

Query: 176 LFRELPLKLS-IKPITGSYNIAANALCKLGLIDKAAALLDEMEDNGVKPCVISFNTLLRA 235
           LF E+P + + I P   SY I   + C  G  +KA  ++ +M+  G++   I+F T+L +
Sbjct: 160 LFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSS 219

Query: 236 FYDKGEFDEGDKIWERMIKSGVAPSILSYDFKLQRLVNDGKISKAMDMVMELKSKGLNPH 295
            Y KGE +  D +W  M+K G      +Y+ ++     +    +  +++ E+ S GL P 
Sbjct: 220 LYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESP-ERVKELIEEMSSMGLKPD 279

Query: 296 VGTYNAFIVGACKKGDLDGVRRWYNELLSHGCAPNKVTFNSIVPFLCDKGDYGLVYQVCR 355
             +YN  +   C++G LD  ++ Y  L  + CAPN  TF +++  LC    Y   Y + +
Sbjct: 280 TISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFK 339

Query: 356 RMFKRQCSVDQCLLQKVVDALAKKSMMEEAKILV 385
           +        D   L+ +V  L +    ++AK L+
Sbjct: 340 KSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLI 371

The following BLAST results are available for this feature:
BLAST of Spo03108.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902184085|gb|KNA10241.1|3.3e-228100.hypothetical protein SOVF_1460... [more]
gi|902184084|gb|KNA10240.1|1.1e-14665.2hypothetical protein SOVF_1460... [more]
gi|731351183|ref|XP_010686906.1|1.3e-14464.2PREDICTED: pentatricopeptide r... [more]
gi|697152506|ref|XP_009630488.1|1.5e-9247.9PREDICTED: pentatricopeptide r... [more]
gi|565352696|ref|XP_006343276.1|3.8e-9148.3PREDICTED: pentatricopeptide r... [more]
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BLAST of Spo03108.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QUS7_SPIOL2.3e-228100.Uncharacterized protein OS=Spi... [more]
A0A0K9QSM1_SPIOL7.6e-14765.2Uncharacterized protein OS=Spi... [more]
A0A0J8BVP6_BETVU9.3e-14564.2Uncharacterized protein OS=Bet... [more]
A0A0V0HZU8_SOLCH3.1e-9248.5Putative pentatricopeptide rep... [more]
M1A228_SOLTU2.6e-9148.3Uncharacterized protein OS=Sol... [more]
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BLAST of Spo03108.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PPR82_ARATH3.9e-8042.3Pentatricopeptide repeat-conta... [more]
PP226_ARATH3.3e-7943.9Pentatricopeptide repeat-conta... [more]
PP225_ARATH1.1e-6637.1Pentatricopeptide repeat-conta... [more]
PP134_ARATH1.6e-4129.4Pentatricopeptide repeat-conta... [more]
PP352_ARATH1.8e-4029.9Pentatricopeptide repeat-conta... [more]
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BLAST of Spo03108.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT1G55890.12.2e-8142.3Tetratricopeptide repeat (TPR)... [more]
AT3G13160.11.9e-8043.9Tetratricopeptide repeat (TPR)... [more]
AT3G13150.16.3e-6837.1Tetratricopeptide repeat (TPR)... [more]
AT1G80150.19.1e-4329.4Tetratricopeptide repeat (TPR)... [more]
AT4G36680.11.0e-4129.9Tetratricopeptide repeat (TPR)... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 121..146
score: 0.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 289..337
score: 4.3
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 208..261
score: 4.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 222..255
score: 8.6E-7coord: 188..219
score: 4.4E-7coord: 293..325
score: 1.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 149..184
score: 6.182coord: 185..219
score: 11.027coord: 255..289
score: 8.188coord: 114..148
score: 7.75coord: 290..324
score: 10.424coord: 220..254
score: 11.509coord: 360..394
score: 5.415coord: 325..359
score: 8
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 53..388
score: 2.2E
NoneNo IPR availablePANTHERPTHR24015:SF773SUBFAMILY NOT NAMEDcoord: 53..388
score: 2.2E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
biological_process GO:0030154 cell differentiation
biological_process GO:0009658 chloroplast organization
biological_process GO:0045036 protein targeting to chloroplast
biological_process GO:0006364 rRNA processing
biological_process GO:0006399 tRNA metabolic process
biological_process GO:0006457 protein folding
biological_process GO:0034976 response to endoplasmic reticulum stress
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0009408 response to heat
biological_process GO:0009644 response to high light intensity
biological_process GO:0042542 response to hydrogen peroxide
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0006766 vitamin metabolic process
biological_process GO:0010103 stomatal complex morphogenesis
biological_process GO:0019748 secondary metabolic process
biological_process GO:0009695 jasmonic acid biosynthetic process
biological_process GO:0042545 cell wall modification
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0009108 coenzyme biosynthetic process
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0006546 glycine catabolic process
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0009106 lipoate metabolic process
biological_process GO:0009117 nucleotide metabolic process
biological_process GO:0006733 oxidoreduction coenzyme metabolic process
biological_process GO:0016310 phosphorylation
biological_process GO:0010207 photosystem II assembly
cellular_component GO:0005768 endosome
cellular_component GO:0005840 ribosome
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0009507 chloroplast
molecular_function GO:0005515 protein binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0016301 kinase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo009210.74Barchart | Table
Spo029640.74Barchart | Table
Spo247500.74Barchart | Table
Spo239330.74Barchart | Table
Spo158410.73Barchart | Table
Spo123190.72Barchart | Table
Spo189080.71Barchart | Table
Spo086250.71Barchart | Table
Spo150250.71Barchart | Table
Spo022140.70Barchart | Table
Spo232270.70Barchart | Table
Spo089980.70Barchart | Table
Spo194180.69Barchart | Table
Spo020010.69Barchart | Table
Spo043770.69Barchart | Table
Spo064990.69Barchart | Table
Spo081650.69Barchart | Table
Spo087750.69Barchart | Table
Spo106230.69Barchart | Table
Spo161840.69Barchart | Table
Spo192200.69Barchart | Table
Spo199390.69Barchart | Table
Spo157930.68Barchart | Table
Spo076440.68Barchart | Table
Spo023300.68Barchart | Table
Spo165630.68Barchart | Table
Spo173480.68Barchart | Table
Spo224560.68Barchart | Table
Spo121960.68Barchart | Table
Spo143100.68Barchart | Table
Spo045800.68Barchart | Table
Spo039720.68Barchart | Table
Spo261950.67Barchart | Table
Spo049950.67Barchart | Table
Spo272910.67Barchart | Table
Spo217570.67Barchart | Table
Spo123770.67Barchart | Table
Spo057330.67Barchart | Table
Spo179870.67Barchart | Table
Spo184780.67Barchart | Table
Spo107440.66Barchart | Table
Spo088790.66Barchart | Table
Spo127780.66Barchart | Table
Spo146540.66Barchart | Table
Spo085350.66Barchart | Table
Spo157660.66Barchart | Table
Spo185980.66Barchart | Table
Spo224530.66Barchart | Table
Spo226100.66Barchart | Table
Spo240540.66Barchart | Table
Spo090270.66Barchart | Table
Spo094410.66Barchart | Table
Spo112210.66Barchart | Table
Spo268460.65Barchart | Table
Spo266440.65Barchart | Table
Spo266710.65Barchart | Table
Spo137190.65Barchart | Table