Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAGTGTATATAAATTCGCAATGGATGCATAGGTGGTTATGCACACAAGAAGTAACTACACATTAAGCTTAAGCTTCTCTTGTTTAAAACATATTATCAAGGTACAGATAAGCGCTTGCTTTTGTTAATAATAAATAATAGTTTTTTACTACTATTATTTTTGCTTAATTATTGATTATTTGTTGTTATAGGAGGTTACGTAGCAAGTTAAGGGAAAATGGCTTCAAGACAGGCATCAATCTCAAGGAATGACCATGATGAGAAAGAAATTGTGCTTGCGATGGTAGAGAAGTCAAAGAGCATTGGAAAATCTAAATCCAAGAATGTTGTGAACAAACAGAGTTTGGCTCAAAACAGTGCGGTTGTCACCATAAACAACACCACCACTGGACTAATCAACTTTAACCAATCTTACGATTGGGCAGGGAGTATCGTTGGTGACACATACCCCGTAGGTATTTTCTCTGGGAAGCCAGGTACCTTCACCCATGCTGGACAAACTAAAGACGGCTCCCAAGGAGCAGTAGTTTACTCTGGAAATAACAAGCAAGGAATTCCTTGTGGATGGCTTTTGGCTTGGATTGCACCCACCAATAACTCAACGACCACTCCTAATAGGGTAATCAAAGATCTCGATTTTATACCTGTATTTTTTTAAACATACACTACAAGAATTTGTATCTTTAATGACAACCTAATATGACGGATCAAAAATCTTATCGCAAAAGATTTTTGCGACGGGGCTAACAACCAAAGAAAGACCGGAATAACCGTCGCAAATGTCTTTTACGAGGGGTTAAAGACGAGATTTTTCATTAATAACGGTCCTCTTTTATGACGGGTTCATGATAGGAAATCTCGTCGTCAATCAACGATTATTAGCCTTTACCGACGAGATTTCCTGTTGTTAATGGTACGGTTTCTTGTAGTGATACATACTTCATCCGTATTTTGATAGATCGATCCATCTACTATTTAATTTGTTGTAGGTGTATGTTGAGTGTGGCCCGGTCGCTAACTATGATATCATAAACTGGATCGCAATCAAATCTAAGCTCAATGTAGCAAACGACTACGACAACTACTTTGATCCAGCTACTCAGACCACCATTGCTGCCCAGCTTACTCCAAGCGGTGGTTTTGCTGCTCTTGGTGCAAATTTTGGAGCTATGTAATGCTCCTAATATCCATTATGCACCTTATTTAACGGTCGTCACTTCTAATTAATAATTAAAATGCATATATGGTAGCTCATAAAACTTTGGTACGGGTTGATTATTTATAGTACTATCTCAGTTTCAAAAAAAAAATTGGGGTTACTATTTGCACAAATATTAAGATAAAAATATAAAAGTTGGTTGAATATAGTAAAGTATCGATAAAGTAAGAAAAATGTGTAAAAAGACAGGTTGGTGTAAGAGAAAAATTAATAAAATAAGAGAAAGTGAGTGAAATATTTTAAATATTGTAAGAGTAAGAATGATAAAGAACATTATAAAACGCCTAAGACGGAAAGTGTAAATTCATTTTAAAACAGAGGTAGTACTCGATAAGGTGGGCCTTGTATCATTTTTTACCTAGTTAAACCTATATAATATTTCAACTTTTGTTTTTATTTATCTATCTATCTTAAAAAAAAAAAAAAAAAAAAGGTATAGGACCGTTATTTTCACAGTGGGTAAAATATAAGGTAGAAAGTATAGGACCGTTATTTAAAAAAAATCCTTAAAAAAGTAGGTAGACCGTTATTTTCACAGTGGGTAAAAAGTATAGGACCGTTATTTAAAAAAAATCCTTTCCTCTGTTTTGTTGTATATCTAATTGAATTGTTTTTAAAAAATAGTTAGTTGAACAGTGAATTGCCGCTGCAGAGTGCAGAATTGTGCGAGTGCCGTGATGAATAATGATAGCAAGAGCATAACAATGGTGTTATACCAGAGTTATGATTGGTATGGTAGTGTATCGGGTCCGTATCCCTATGGTATTACCCCCAGTAATTACTCTCAGTTTGTGCATCGTGCGGATCTTACAAATGGTTCCAAGGGCGCGGTGGTGTACTATGGCACAATTAATCCAACAACTGAAGGTGCCTGGCTCTTGGCTTGGTCTGCGCCCACTGGCACCGATTCAATTCCTCCAAACAATCAGGTTATTTTGTCACTTTGGTGAATTATTATCTTTTATAAGTCTAAAAAATGTGGGATTTTATAACATTAAAACTAAATTCATAAGGGGCACTTTAGTAAATTTCAAATGAATGTTAGTTGGTTGATCAATTGATAAAGGGCACTTTAGTAACTTTGATTGTCAAGATAAAGGTGGGAAATTTTCGAGTTGGGCCTGCTAACGGAAAGTTTGACGGTATCAGTCATAAGGTCGTGTTATAAAAGAAAAAGATGATATAAGATATACGGAGTAGTTGTGTTTTTTTTAATATTATCAGGAAAATTTTCAATTACTGTAAGACAAGTATAGGACCCGTGCGATGCACGGTTTATAAATTTTAACTTTAAGTGCGAAGTTAAATTAGTTTAGAAAAAAAGTGGATTTTTCATTCTCATTTATACCCGTCACCCATATTTTAATGTTAGGTATAAAAATCAAAATTAACATCCTATACTATCTCATTTTTTTATCGTGTTACCCGTAACCATTTGATTACATGCCTCATTAGTCTTTAATTGTTAGAGATGGACAGTGAGTAATTGTTATTGACAACTTTTTTGGCGAAACACAAGCCGCACACGCGGTATGCACGCCGTTGCCGGTTAAAATCGTCATTCTCCGTACCTCGATTTGCTACTTGTGTTGCAGGTGTACGTTGAAACTGGAAAAAAAGAGGAGTACAAGAACACAAATTGGACACAGATTCAAGAGAAGCTAGATAAATGTAGCAGCAATAGTAACTATAAGGATCCAATAACGGGATGCTTCGCTTCTGCAGAAATTTACCGAAACAACAACACCGCAGTTGTTGTTGCACATTTCAACTAGCTTGTGAATTGTGACCAAATTAGCTGCCTGTGACATGCCGTAACTAAATTTGATGCTGAATTATCGTACGTTATAAAGAATATGTAATAAAATAAAATAATGATCGTCCTTAATCGTACCGCATATTTTTAATGCTACAACAGTGTGTATAACTTGTGATATGCTTTTTTATGTAATCTAACACTATATATCTATACAACATTGAGAATTTTCAAGAGTATATGATGTTAATAAGCTTGTAATGTCACAAACTATTTTTGCGACAAAATCTGCTGGACAGTCAGCTATTGTAACAATAATGCTGCAGTCACAACATTAGAAGTTGGACTGGCACACATAGGATTAAACCCA GAGTGTATATAAATTCGCAATGGATGCATAGGTGGTTATGCACACAAGAAGTAACTACACATTAAGCTTAAGCTTCTCTTGTTTAAAACATATTATCAAGGAGGTTACGTAGCAAGTTAAGGGAAAATGGCTTCAAGACAGGCATCAATCTCAAGGAATGACCATGATGAGAAAGAAATTGTGCTTGCGATGGTAGAGAAGTCAAAGAGCATTGGAAAATCTAAATCCAAGAATGTTGTGAACAAACAGAGTTTGGCTCAAAACAGTGCGGTTGTCACCATAAACAACACCACCACTGGACTAATCAACTTTAACCAATCTTACGATTGGGCAGGGAGTATCGTTGGTGACACATACCCCGTAGGTATTTTCTCTGGGAAGCCAGGTACCTTCACCCATGCTGGACAAACTAAAGACGGCTCCCAAGGAGCAGTAGTTTACTCTGGAAATAACAAGCAAGGAATTCCTTGTGGATGGCTTTTGGCTTGGATTGCACCCACCAATAACTCAACGACCACTCCTAATAGGGTGTATGTTGAGTGTGGCCCGGTCGCTAACTATGATATCATAAACTGGATCGCAATCAAATCTAAGCTCAATGTAGCAAACGACTACGACAACTACTTTGATCCAGCTACTCAGACCACCATTGCTGCCCAGCTTACTCCAAGCGGTGGTTTTGCTGCTCTTGGTGCAAATTTTGGAGCTATAGTGCAGAATTGTGCGAGTGCCGTGATGAATAATGATAGCAAGAGCATAACAATGGTGTTATACCAGAGTTATGATTGGTATGGTAGTGTATCGGGTCCGTATCCCTATGGTATTACCCCCAGTAATTACTCTCAGTTTGTGCATCGTGCGGATCTTACAAATGGTTCCAAGGGCGCGGTGGTGTACTATGGCACAATTAATCCAACAACTGAAGGTGCCTGGCTCTTGGCTTGGTCTGCGCCCACTGGCACCGATTCAATTCCTCCAAACAATCAGGTGTACGTTGAAACTGGAAAAAAAGAGGAGTACAAGAACACAAATTGGACACAGATTCAAGAGAAGCTAGATAAATGTAGCAGCAATAGTAACTATAAGGATCCAATAACGGGATGCTTCGCTTCTGCAGAAATTTACCGAAACAACAACACCGCAGTTGTTGTTGCACATTTCAACTAGCTTGTGAATTGTGACCAAATTAGCTGCCTGTGACATGCCGTAACTAAATTTGATGCTGAATTATCGTACGTTATAAAGAATATGTAATAAAATAAAATAATGATCGTCCTTAATCGTACCGCATATTTTTAATGCTACAACAGTGTGTATAACTTGTGATATGCTTTTTTATGTAATCTAACACTATATATCTATACAACATTGAGAATTTTCAAGAGTATATGATGTTAATAAGCTTGTAATGTCACAAACTATTTTTGCGACAAAATCTGCTGGACAGTCAGCTATTGTAACAATAATGCTGCAGTCACAACATTAGAAGTTGGACTGGCACACATAGGATTAAACCCA ATGGCTTCAAGACAGGCATCAATCTCAAGGAATGACCATGATGAGAAAGAAATTGTGCTTGCGATGGTAGAGAAGTCAAAGAGCATTGGAAAATCTAAATCCAAGAATGTTGTGAACAAACAGAGTTTGGCTCAAAACAGTGCGGTTGTCACCATAAACAACACCACCACTGGACTAATCAACTTTAACCAATCTTACGATTGGGCAGGGAGTATCGTTGGTGACACATACCCCGTAGGTATTTTCTCTGGGAAGCCAGGTACCTTCACCCATGCTGGACAAACTAAAGACGGCTCCCAAGGAGCAGTAGTTTACTCTGGAAATAACAAGCAAGGAATTCCTTGTGGATGGCTTTTGGCTTGGATTGCACCCACCAATAACTCAACGACCACTCCTAATAGGGTGTATGTTGAGTGTGGCCCGGTCGCTAACTATGATATCATAAACTGGATCGCAATCAAATCTAAGCTCAATGTAGCAAACGACTACGACAACTACTTTGATCCAGCTACTCAGACCACCATTGCTGCCCAGCTTACTCCAAGCGGTGGTTTTGCTGCTCTTGGTGCAAATTTTGGAGCTATAGTGCAGAATTGTGCGAGTGCCGTGATGAATAATGATAGCAAGAGCATAACAATGGTGTTATACCAGAGTTATGATTGGTATGGTAGTGTATCGGGTCCGTATCCCTATGGTATTACCCCCAGTAATTACTCTCAGTTTGTGCATCGTGCGGATCTTACAAATGGTTCCAAGGGCGCGGTGGTGTACTATGGCACAATTAATCCAACAACTGAAGGTGCCTGGCTCTTGGCTTGGTCTGCGCCCACTGGCACCGATTCAATTCCTCCAAACAATCAGGTGTACGTTGAAACTGGAAAAAAAGAGGAGTACAAGAACACAAATTGGACACAGATTCAAGAGAAGCTAGATAAATGTAGCAGCAATAGTAACTATAAGGATCCAATAACGGGATGCTTCGCTTCTGCAGAAATTTACCGAAACAACAACACCGCAGTTGTTGTTGCACATTTCAACTAG MASRQASISRNDHDEKEIVLAMVEKSKSIGKSKSKNVVNKQSLAQNSAVVTINNTTTGLINFNQSYDWAGSIVGDTYPVGIFSGKPGTFTHAGQTKDGSQGAVVYSGNNKQGIPCGWLLAWIAPTNNSTTTPNRVYVECGPVANYDIINWIAIKSKLNVANDYDNYFDPATQTTIAAQLTPSGGFAALGANFGAIVQNCASAVMNNDSKSITMVLYQSYDWYGSVSGPYPYGITPSNYSQFVHRADLTNGSKGAVVYYGTINPTTEGAWLLAWSAPTGTDSIPPNNQVYVETGKKEEYKNTNWTQIQEKLDKCSSNSNYKDPITGCFASAEIYRNNNTAVVVAHFN Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo03187.1 vs. NCBI nr
Match: gi|902160431|gb|KNA06445.1| (hypothetical protein SOVF_181040 [Spinacia oleracea]) HSP 1 Score: 703.0 bits (1813), Expect = 2.600e-199 Identity = 346/346 (100.00%), Postives = 346/346 (100.00%), Query Frame = 1
BLAST of Spo03187.1 vs. NCBI nr
Match: gi|902160430|gb|KNA06444.1| (hypothetical protein SOVF_181030 [Spinacia oleracea]) HSP 1 Score: 337.4 bits (864), Expect = 2.900e-89 Identity = 168/195 (86.15%), Postives = 176/195 (90.26%), Query Frame = 1
BLAST of Spo03187.1 vs. NCBI nr
Match: gi|902164824|gb|KNA07007.1| (hypothetical protein SOVF_175870 [Spinacia oleracea]) HSP 1 Score: 216.1 bits (549), Expect = 9.800e-53 Identity = 113/195 (57.95%), Postives = 146/195 (74.87%), Query Frame = 1
BLAST of Spo03187.1 vs. NCBI nr
Match: gi|731322092|ref|XP_010671702.1| (PREDICTED: jasmonate-induced protein homolog [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 190.3 bits (482), Expect = 5.700e-45 Identity = 101/197 (51.27%), Postives = 141/197 (71.57%), Query Frame = 1
BLAST of Spo03187.1 vs. NCBI nr
Match: gi|731322090|ref|XP_010671701.1| (PREDICTED: jasmonate-induced protein homolog [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 186.0 bits (471), Expect = 1.100e-43 Identity = 98/197 (49.75%), Postives = 139/197 (70.56%), Query Frame = 1
BLAST of Spo03187.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QGU9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_181040 PE=4 SV=1) HSP 1 Score: 703.0 bits (1813), Expect = 1.800e-199 Identity = 346/346 (100.00%), Postives = 346/346 (100.00%), Query Frame = 1
BLAST of Spo03187.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QGM0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_181030 PE=4 SV=1) HSP 1 Score: 337.4 bits (864), Expect = 2.000e-89 Identity = 168/195 (86.15%), Postives = 176/195 (90.26%), Query Frame = 1
BLAST of Spo03187.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QIC6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_175870 PE=4 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 6.800e-53 Identity = 113/195 (57.95%), Postives = 146/195 (74.87%), Query Frame = 1
BLAST of Spo03187.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CRM6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g054010 PE=4 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 4.000e-45 Identity = 101/197 (51.27%), Postives = 141/197 (71.57%), Query Frame = 1
BLAST of Spo03187.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FK11_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g054000 PE=4 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 7.500e-44 Identity = 98/197 (49.75%), Postives = 139/197 (70.56%), Query Frame = 1
BLAST of Spo03187.1 vs. ExPASy Swiss-Prot
Match: JIPH_ATRCA (Jasmonate-induced protein homolog OS=Atriplex canescens PE=2 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 2.500e-40 Identity = 95/193 (49.22%), Postives = 125/193 (64.77%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo03187.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo03187.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo03187.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 1
BLAST of Spo03187.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 0
RNA-Seq Expression
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