Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCAGTTTTAGAAATTCTAAGAATGATTGTAAGCAGGTGTCAAAAAGTGATTGGCGCTTTAAGATATATTTCATAGGGTGATGATCATTTTCGTATTTCATAATTTGATGGTTATTATCAACATGGATGTAATTAAGTGCTCACGGGCTTTCCCTTGTTATTTGAACTCTAGTAGTCAGTGATTGGTTTTGTTCATTTTATCAATTTATTATGTCCTTTAGCTAAAATGATAAAGTGTACAGTATTTTGTTTATGAGGGAATTAATTGTTTCATTTCTTGGTCATATCGATTATATATTTGTTAAGAGTTCTTCCCAAATATAATTGGTACAAAATTGACATATACTTTTAATTGGATGAAAAATATTACTCATGTTAGTAAGTAGTAGTAGAATCGTAGATATCATAGTTGATCGGATTACAAACAATAAAACAAAATGTGTCCCACTAATTAAAGCTAGACTTGATGATAGGAGTAATATCTTTGAAAATACAAGGCAAGTTTGTGAAAACTAAAAAGTCCTTGCGGACCATGCAGAAGACGACAGTGTCACATTGTCTGCCAAAGATCAAAGTTTCACATTCGTAAACATGTTGCTCACTATACAAAATTATTAACGACTTTAACTTTGAAAATTTTGTGCAGTGGGAAAAGAGATCGAATTACTTCATCATAAATAGTATTATATCTTTATAAAGTACTGTATTTGATTAGGTGTGTTTCAATCATTTTTCATTGTTTGGTATTATATGACGAGGGGTACAAAATAATTTTCCAATAACTCGATCTCTCAAGGGTGAAAAATGTTTCATTACAAATAAAAGGAAACCATTTTACAAAATGATAAAGTTCGCAACTTGCGACAAATTATTTGTGTGATGTATCACATATTACAATTGCAAACTAAAGATTTTTTAACATAAATACAATATCATTATAATTATATATATATATATATATATATATATATATATATAAATATATAAAATGGGTAGGCAATATTTATATCCTTATTTAGCAAAATATTATTTTTATTTTATTCTTTAAAATTTTGAATAACTTGTAAATTAAGGAATTAAAAAAAAAAACAATCACATATTATTATTACTAGATTTTAGCCTGTGTAATGCACAAATTATATTAAATTGTTAAGTTAAAATAAAAATCCTATATATAGCAACTGCTATATTTTATATATTAGATTAGATTAGGTTTTTTTTATTTTGGATTGAATTTCGGTTTAGATTTATTTTTTAACTATTAAAATGTTTGGTTTTGGATGAAGTTGTATATGCGTAATATTAGTAACTAGATTTTAGCGCGTGCGATGCACTGATTCTATTAGATTGTTAGTTTAAAATAAAACTCATATGTATACCAACTGCTATATTTATATATTAGGTTATATTAGTTTTTGATTTGGATTGAATTTCATTTTAATTTATTTTTTTAATTATTAGAGTGTTTGATTTTGGATGAAATTGTATATGCACAATATTAATCATTAATTAATTAAAATATCTATGTGGCACCTAATTAATTATCTACGTGGCACTCGATTTTTTTATTAAAAATAAATTAGAAATCTTGTTTATCATTGGCCGAAACAATAAGATATCCTACGTGGCGCTCTAATAATTCGGCAAATATGTCTCCTTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTAGATTATTTTTAAAAGAAAATATACGTGACACCTAATTATTTATCTACGTGGCATTCAACTTTTTTAATTCAAAAATAATTTCGAAATCTTATTTTTTATTGGCCGGAACCATTTATATTTCCTACGTGGCGCTTTAATATTTGATTAATGTTTGATTTTGGATTGAATATTTTTTAGATTAGTGTCTGATTTTGGATGAATTTTAATTTAGATTTTCTTTTTAATTATTAGAGTGTTTGATTTTGGATGGAGTTGAATATATTAGTAATTAATTAATTAAAATATCTACTTGGTACCTAATTAATTATCTACGTGACACTCGATTTTTTTCATTGGCCGAAACTATTAGATTTCCTACGTGGCGCTCTAATAGCTTAGTAAATATGCCTCCTTAGTAAATATATATATATATATATATATATATATATATATATATATATATATATATATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTTATCCTTTTCCATCAGGTAATAATCATGTTTCATGCTTTTCTTTCTTGTTTTCCACCATCTTAATTCTTCATTGATTAATCTAATGTTCTACAAAGTGGACATTGCCATGTTCTACTTTTGCCTGTTTCATGTGGTATCCATAGGACAGAATTATAACTTAATGGGAAACTAAATTAGTTGCTTAGTGGACTAATTTGTTTTGCTAGCTAATTAATCATAATTTACCTAACATTTAATTTGTTTTTGATAAGAAGCTAAGATAACCAAGTGCTTAATTAACTACTGTGTCACACATTCTATTTTCCAGTTTTCCTAAAATATACTAAAGGGGCGTGGTGGCCTGGCTAGTTAGCTTGAAAACTTTTGCATGATTGATTACATCCTACTATAATGCCTGGTTTGAACGTACACACAAAAGCAAAGGAAAATGGATAATTATGTGGTTGGTTAAACATAGTGTATTGCCAAGTGGCATGCACGCAACAAACAAGATGTAGTGTCCGGGTCAATAAGAAATGGCTTAATGCATGGGACCATTTGGGAAGCTAGGTTATTGCTGGAAAAGCATTACTGACTATTTAGCTTCAATAGTTGAATTGAATAACACTAAGGGTTAGGTTGAAAAATACTCCGTAATCTCTATTTCATAAGGGAATAGAGGAGGGTTAATATCGTAATCACGCTTTTGGTGTCCCAACTTAAAAGACTAAAATACCCTATATAATTTTCAGTTTTTGTCACTTATAAACCTGATTTGACTACAATAAATCTCCAATTTTCCCGTATGTAATAGAGATTTTTAATAGAAACATGTCAAAGTTTGTTATATACTCCCTCTGTATTTATTTAAGGGATACACTTGTCTTTTCCGGCCGTATTTATTTAAGAGAAACACTTGACATTTTTAGTAACTTGACAATTCCACCATCTAACTAAATAATCTATTTACACCCAACCCCCAACCCCCATCCCCTAAAATGACATGGTCTCCACTTGTTTTACCTATTAAAATACAAAAGGTCTTGTGCGCACAAGGTGCACAATAAATTTATTGTACACCAATATAACTTTTACTTATTTTCTTGTAACTTTAACTTAGTTTTGATTAACTTTTATATTAGTAAAAAAAATTGATAGATAAACATTTTAAAGGGTTATATGATTAATTTTATACATTATTAGTGATTTTAAAGAAATAAGTTTTATTAAAATGAAAAAAAAAATCACTAGAAAATAGATAACTTTTACATATATAAGCTTGACTTTTAAGCATTTTGATTTAACTTTTACTCTAGTGTACAATATTTATTGTACAACTCTTGTAAATAAGAATTTGTGATTAAAATATTTACCCAACCCCACTTGTTTTATTACTTTATTTCATTCAATTGTTTTTCTTAATACTCGTGTCCGACCAAATGTATCTCTCAAATAAATACGGAGGGAGTATGAACTTTATGAACATTTTTTTAGGCGATTAAATGTAATATAACACTAATGGAGTACAATATTTTTTAGTTTTTAAATACCGCACGAATCGCGTGCATGCAATACTAGTGTGTAATAAAAAAAGGGCTACATGATAACATGAATTGTGTTTCCTTAACGCAGGGGACCCGTTAAATGATGCAAACAGCAAGGTGATGAAGTTCATAATAAAGAAACAACGTGTGGATGATCCGGCCCATATACCAAAATGGCTAATAAAATATCCATCACCAAACTTATCCACTGCTTCACGGACTCGTTACATTTCCATGTACGAGTACACAAGTCCATCCGACGAACCCACCCATCTTTTTATCAACGGACTATCATTCGACGCTCCAGTAACAGAGTTCGCTAAGGTGGGGTCCAGTGAAATATGGTATGTGATTAATCTAACAGAGGATAATCACCCGCTTCATGTACATCTAGGATTGTTTAAGGTATTGGAGCAAACAAAATTGCTGGATTTTGATAAGTTTAAGGATTGTATGGCCAACAAAAACAACGCAGAGAGGTGTAATGTACACAAACATGCACGGGGTAAAAAATTAGATGTAACAAAGCATGAAAGAGGGTGGAAGAATGTGTTCAAAATGTGGCCAGGTTATGCAACAAAGATATATGTGAGATTCTCTTACATTCATACCAACGCTTCCTACCCTTTTGATGCTACTAAGGACCCTGGTTATGTCTACCATTGCCACGTAAGTATACTCAACAATTACTCACTTACTCTTACATATCTCTTATACAAAAAAAAAACCGATCTATGAAATTCCTATTACTCCCTCCGTATTTATTTAAGGGATACACTTGCCTTTTCTGGCCGTATTTATTTAAGAGATACACTTGCCATTTTTAGTAACTTATCAACCCTACCATCTAATTAAATAATACATCTAATTTACCCTATGATCCACCATCCTATTAAACAAATAATTTCATAAACCCACCTTATTTCCCACCCACCAAAATAACATGGTCCCCACTTGTTTTATTATTAAAATATCTATCCAATCCCACTTGCTTTATTAATTTTTTTCATTCAATTTTTCTTTTTAATACCTGTGTCCGGCCAAGTGTATCTCTTAAATAAATACGGAGGGAGTATAACCTTATTAACTTGTTGAATAAATTTAACTTGTGGTTGATAATGATATACGCACTTGTAGATACTGGATCATGAGGATAATGTCATGATGCGGCCGTTTAAGTTGGTAAACTAGGATTTGGAGGACGACCTGAGATCTCATGCATGTTATCACCAAGCTAGGTATGTTTTTCAGTCCTTATTGCTCATCTATTACTTATATACTAAAAGAGACACCAGGAATGACACGTGTCAATTCCTGGTGTGATTTTTTCCCGCCAAAAATTCTTTCCTTAAAAAAATATTTACTTTATTCTATTTTTATTTTCTCTCCTTTTATATAAATAATAAATAGAAAAAATTATAGGATTATTAAATATGACATTATTAAAAAAAATTGGTAATATTTAGTCAGATCTTCATATCAATAATAATATTTTGTTCATATTAAGCATATCAAATATTTAATTCGGTCAAATCATCATATTAAACATATAAAATATACACNGTTCATATTAAGCATATCAAATATTTAATTCGGTCAAATCATCATATTAAACATATAAAATATACACTACGTAATAGAGCGGAAATTGTATATTATATGATAAAATGAGTACGTTCGAGATTTATTAATTACGCAATAGATTTAAGGGATAAATATTTCAGTTAAAAAAGATAGTCAATTAATAATTTTCAAATAACCGTGCATGCACGGGACCTAATTTAGTTTGCAACAAAAATAAATTGTTTTTCAAAACTTTCAACATTATTTAATTTGTTGTTTGTTTATTTACAATGTATGCTGAACCTTAATTTCTGGGATTTGCAGGAAATTCAGTTGGTCATAAATCATAATGCCCCACTAAGTCAACTATATATGCCTTTTCAGTTCTCTCATTAAGTCAAAAATTTGTAGATTTGTACCGCAGACAAACGCGCGCCACACCTCAAAATACTGTAATTTCTCGATTCATCATCTCGCCTAAGAACATGTATTCCGAAAATAAATGTACTCCACCAAATTTACATGTGTCCGAGGGCCTACAAACGAGTTTGATGGACTTGGGTTTTGTTCTGTTCTACCTAATCTTGATAAAAGTTATTAATATTCAACCTAACTTGGGCTTGAACGAGTTTTATAAATTCTTATTCCAACGTGGTTTATAA ATGGGCAGTTTTAGAAATTCTAAGAATGATTGGGACCCGTTAAATGATGCAAACAGCAAGGTGATGAAGTTCATAATAAAGAAACAACGTGTGGATGATCCGGCCCATATACCAAAATGGCTAATAAAATATCCATCACCAAACTTATCCACTGCTTCACGGACTCGTTACATTTCCATGTACGAGTACACAAGTCCATCCGACGAACCCACCCATCTTTTTATCAACGGACTATCATTCGACGCTCCAGTAACAGAGTTCGCTAAGGTGGGGTCCAGTGAAATATGGTATGTGATTAATCTAACAGAGGATAATCACCCGCTTCATGTACATCTAGGATTGTTTAAGGTATTGGAGCAAACAAAATTGCTGGATTTTGATAAGTTTAAGGATTGTATGGCCAACAAAAACAACGCAGAGAGGTGTAATGTACACAAACATGCACGGGGTAAAAAATTAGATGTAACAAAGCATGAAAGAGGGTGGAAGAATGTGTTCAAAATGTGGCCAGGTTATGCAACAAAGATATATGTGAGATTCTCTTACATTCATACCAACGCTTCCTACCCTTTTGATGCTACTAAGGACCCTGGTTATGTCTACCATTGCCACATACTGGATCATGAGGATAATGTCATGATGCGGCCGTTTAAGTTGGTAAACTAGGATTTGGAGGACGACCTGAGATCTCATGCATGTTATCACCAAGCTAGGAAATTCAGTTGGTCATAAATCATAATGCCCCACTAAGTCAACTATATATGCCTTTTCAGTTCTCTCATTAAGTCAAAAATTTGTAGATTTGTACCGCAGACAAACGCGCGCCACACCTCAAAATACTGTAATTTCTCGATTCATCATCTCGCCTAAGAACATGTATTCCGAAAATAAATGTACTCCACCAAATTTACATGTGTCCGAGGGCCTACAAACGAGTTTGATGGACTTGGGTTTTGTTCTGTTCTACCTAATCTTGATAAAAGTTATTAATATTCAACCTAACTTGGGCTTGAACGAGTTTTATAAATTCTTATTCCAACGTGGTTTATAA ATGGGCAGTTTTAGAAATTCTAAGAATGATTGGGACCCGTTAAATGATGCAAACAGCAAGGTGATGAAGTTCATAATAAAGAAACAACGTGTGGATGATCCGGCCCATATACCAAAATGGCTAATAAAATATCCATCACCAAACTTATCCACTGCTTCACGGACTCGTTACATTTCCATGTACGAGTACACAAGTCCATCCGACGAACCCACCCATCTTTTTATCAACGGACTATCATTCGACGCTCCAGTAACAGAGTTCGCTAAGGTGGGGTCCAGTGAAATATGGTATGTGATTAATCTAACAGAGGATAATCACCCGCTTCATGTACATCTAGGATTGTTTAAGGTATTGGAGCAAACAAAATTGCTGGATTTTGATAAGTTTAAGGATTGTATGGCCAACAAAAACAACGCAGAGAGGTGTAATGTACACAAACATGCACGGGGTAAAAAATTAGATGTAACAAAGCATGAAAGAGGGTGGAAGAATGTGTTCAAAATGTGGCCAGGTTATGCAACAAAGATATATGTGAGATTCTCTTACATTCATACCAACGCTTCCTACCCTTTTGATGCTACTAAGGACCCTGGTTATGTCTACCATTGCCACATACTGGATCATGAGGATAATGTCATGATGCGGCCGTTTAAGTTGGTAAACTAG MGSFRNSKNDWDPLNDANSKVMKFIIKKQRVDDPAHIPKWLIKYPSPNLSTASRTRYISMYEYTSPSDEPTHLFINGLSFDAPVTEFAKVGSSEIWYVINLTEDNHPLHVHLGLFKVLEQTKLLDFDKFKDCMANKNNAERCNVHKHARGKKLDVTKHERGWKNVFKMWPGYATKIYVRFSYIHTNASYPFDATKDPGYVYHCHILDHEDNVMMRPFKLVN Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo03210.1 vs. NCBI nr
Match: gi|902118579|gb|KNA03955.1| (hypothetical protein SOVF_204250, partial [Spinacia oleracea]) HSP 1 Score: 441.0 bits (1133), Expect = 1.200e-120 Identity = 206/210 (98.10%), Postives = 208/210 (99.05%), Query Frame = 1
BLAST of Spo03210.1 vs. NCBI nr
Match: gi|731368038|ref|XP_010695929.1| (PREDICTED: multicopper oxidase LPR2-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 358.2 bits (918), Expect = 1.000e-95 Identity = 168/200 (84.00%), Postives = 180/200 (90.00%), Query Frame = 1
BLAST of Spo03210.1 vs. NCBI nr
Match: gi|747041916|ref|XP_011075722.1| (PREDICTED: multicopper oxidase LPR1 [Sesamum indicum]) HSP 1 Score: 323.2 bits (827), Expect = 3.600e-85 Identity = 149/210 (70.95%), Postives = 175/210 (83.33%), Query Frame = 1
BLAST of Spo03210.1 vs. NCBI nr
Match: gi|567911949|ref|XP_006448288.1| (hypothetical protein CICLE_v10014737mg [Citrus clementina]) HSP 1 Score: 320.9 bits (821), Expect = 1.800e-84 Identity = 146/209 (69.86%), Postives = 176/209 (84.21%), Query Frame = 1
BLAST of Spo03210.1 vs. NCBI nr
Match: gi|641845825|gb|KDO64711.1| (hypothetical protein CISIN_1g008071mg [Citrus sinensis]) HSP 1 Score: 320.5 bits (820), Expect = 2.300e-84 Identity = 146/209 (69.86%), Postives = 175/209 (83.73%), Query Frame = 1
BLAST of Spo03210.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q9K2_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_204250 PE=4 SV=1) HSP 1 Score: 441.0 bits (1133), Expect = 8.300e-121 Identity = 206/210 (98.10%), Postives = 208/210 (99.05%), Query Frame = 1
BLAST of Spo03210.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B8K0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g156330 PE=4 SV=1) HSP 1 Score: 358.2 bits (918), Expect = 7.100e-96 Identity = 168/200 (84.00%), Postives = 180/200 (90.00%), Query Frame = 1
BLAST of Spo03210.1 vs. UniProtKB/TrEMBL
Match: V4TM17_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10014737mg PE=4 SV=1) HSP 1 Score: 320.9 bits (821), Expect = 1.300e-84 Identity = 146/209 (69.86%), Postives = 176/209 (84.21%), Query Frame = 1
BLAST of Spo03210.1 vs. UniProtKB/TrEMBL
Match: A0A067FNI2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g008071mg PE=4 SV=1) HSP 1 Score: 320.5 bits (820), Expect = 1.600e-84 Identity = 146/209 (69.86%), Postives = 175/209 (83.73%), Query Frame = 1
BLAST of Spo03210.1 vs. UniProtKB/TrEMBL
Match: R0GVQ3_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10008681mg PE=4 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 4.800e-84 Identity = 147/212 (69.34%), Postives = 175/212 (82.55%), Query Frame = 1
BLAST of Spo03210.1 vs. ExPASy Swiss-Prot
Match: LPR1_ARATH (Multicopper oxidase LPR1 OS=Arabidopsis thaliana GN=LPR1 PE=2 SV=1) HSP 1 Score: 307.0 bits (785), Expect = 1.700e-82 Identity = 141/211 (66.82%), Postives = 170/211 (80.57%), Query Frame = 1
BLAST of Spo03210.1 vs. ExPASy Swiss-Prot
Match: LPR2_ARATH (Multicopper oxidase LPR2 OS=Arabidopsis thaliana GN=LPR2 PE=2 SV=1) HSP 1 Score: 302.0 bits (772), Expect = 5.400e-81 Identity = 138/209 (66.03%), Postives = 171/209 (81.82%), Query Frame = 1
BLAST of Spo03210.1 vs. ExPASy Swiss-Prot
Match: COTA_BACSU (Spore coat protein A OS=Bacillus subtilis (strain 168) GN=cotA PE=1 SV=4) HSP 1 Score: 93.6 bits (231), Expect = 2.900e-18 Identity = 64/213 (30.05%), Postives = 98/213 (46.01%), Query Frame = 1
BLAST of Spo03210.1 vs. ExPASy Swiss-Prot
Match: PHSA_STRAT (O-aminophenol oxidase OS=Streptomyces antibioticus GN=phsA PE=1 SV=3) HSP 1 Score: 53.1 bits (126), Expect = 4.400e-6 Identity = 35/127 (27.56%), Postives = 58/127 (45.67%), Query Frame = 1
BLAST of Spo03210.1 vs. TAIR (Arabidopsis)
Match: AT1G23010.1 (Cupredoxin superfamily protein) HSP 1 Score: 307.0 bits (785), Expect = 9.500e-84 Identity = 141/211 (66.82%), Postives = 170/211 (80.57%), Query Frame = 1
BLAST of Spo03210.1 vs. TAIR (Arabidopsis)
Match: AT1G71040.1 (Cupredoxin superfamily protein) HSP 1 Score: 302.0 bits (772), Expect = 3.000e-82 Identity = 138/209 (66.03%), Postives = 171/209 (81.82%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo03210.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo03210.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo03210.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 4
BLAST of Spo03210.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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