Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACGAAGTTTCCTACAGTTTTGTTCCAAAACAAACACCCCAACAAAATTGCCCAAAATAATTTATATCACGTGAAATTACAATTAATTTATAAAAATAAAAGGAAAAGAAAAGAAAAGTTAATCAACACAAATTTGTCTTCTCTATATCCTCCTCATCTTTCATCCTGTCTCTCCTGATCTCCTCTCCACTCCTCTCCTCTCGTTTTCAATTCTCAGATCGGATCAAGCTATTTTAATCAAACACCTTCCGATCACCAGAAAATCATGTCTACTGCAGTCTTCAACGGCGATGAAACGGCGCCATTCTTCGGCTTTCTTGGTGCCGCAGCTGCTCTAGTTTTCTCCTGTAAGCAATCGCAGATTCAATTTTCAATCTAAATCACCGTTAAATTACACACGAAAAGATAATTTTTTTTTGATCTGGGTATTTGAAATTTTGATATGGGTGTTTGTTAATGTCAGGTATGGGAGCAGCATATGGGACAGCAAAAAGTGGGGTTGGAGTAGCATCAATGGGAGTGATGAGGCCAGAGCTTGTGATGAAGTCAATAGTTCCAGTTGTTATGGCTGGAGTTTTGGGTATCTATGGGTTGATTATTGCTGTGATTATTAGTACCGGGATTAACCCTAAAGCTAAATCGTATTACCTTTTTGATGGTTATGCCCATCTTTCATCTGGTCTGGCTTGTGGTCTTGCTGGTTTATCTGCTGGTATGGCTATTGGTATTGTTGGTGATGCTGGTGTTAGGTAATTTTCACTCTTCAATCTTGATCTCTCTCCTTTGACCTCTTTTTTTAAAAAAAAAAAAAAACTCTGTTAATGTAAGTGTTTATTTGCTTGTTTGTTGATTAGGATTCGTGATTTGGGTTAGATTTTATTTCGGGTTTAGTTGTTTTGGTTAGTGATGATCCGTGACTCCGTATGTTGAAATTATTATGATTCAATGTTGTTAAGCTTTTGACTTTACTTGCAGAACCTTAGCTCGTTCGTTTGCTTAATGAATGTTGATTGCATTTGTTGAATTATGATTAGCTCTGAAGTAGGCATATGGGATTGTCATGATTGTAACAATCATTGATGAATATCAGGATGTTTGCTGCATCATGTTGGTTTCGACCGTTTCGTGATACCAGCAGAATTTTATTTTCGCTAATTTTTACAGTCTTCGTGATGGGTTTTGCATTGTTGCTTGGAGTAATATCTTTTCGATTTCAAGTTTTTTGCCACAGTTGTTTGAATCACCATTTGGTAATTGACCAGTTCAGGGTAAGGTTGCCCAATTGCCTCTATCTTGACTTCCTCAAACCCTACTAGCAAGGTATTGATGTTTTTGAAGTAATCTTGACTCACCAGCAAGTTTGGTTATGTCTTCTCTAGTTGCTAGATAGTGAATCAATAGAAAATGTTGTTTATGCTATTTGAATCATTGGCTATGATTTTACAAGTGATCAGAACTTGATGTTGAGCTACGACGCAACTGATGTAGATGACTTGTGTTAGATGCTGTTTATAAACTTGCCCTTGATACATCATTTTCACTATGAGAAATCTGTTTAGGCCTTTGTGGATTTGCATTGAAGGGGTATAACGCGTTGGGCGCTAGTGATGGTTTCTTTGGAAGTGGGTTCTCCTTTTCTTGTCAGATATATATAGATAGGGACTCGAAGCTGGAATAACTCTTCATCCCCCATTCCCCCACCCCTCAGTCCCTCACCCTCCTGGCAAAACAAACATGTTTATCACATCAGCATCTCAAATGGTTTATAGGGTCACAATGAAGATTTTAGAAGTCGTAAGAAATCTGCTTCTTTCTGCGCTTTGAAATGTAAACCAGCTAATATGAGCTTGTCTTGAAATTTTTAGTGCACACTAATGTGGAGTTGGCTGTAACTTCAACCCCTTAGGAAAAACTTAGAATTTTCTATTTCAGCAGTATATCTGGGCTATGTTACTCCGACTCTTTATTTTACCTCAAGTACCCATGTCGGATTCTCGACACTCGGACATGGGTATGAACACTCCGACACTTCGTATTATCTAAATCAAGGAAAATTTCTACAATTTAGCCGTGTCGTACACTTAGTTTTAAAAAGCGCGCTTTTTTGCGCTTAAAGCTCGGAAGCTCACAGCAAACGCTTCTGCCAGCCGAAGCCTAGCGACATACAAGAAGCGCGCGCTTCCTAGCGCTTCGGTGCTTCTGCGCTTCCTAGCGCTTGTGCGCTTCTTGTAGTCTGGGCACATCAGACCCTTCTTTTTTATAAAAAATAAAGCCACGTGACTCTAATCTTCTTTTTTAAAGTATCACGTGATTTTTTTTTTTTTTTAAAAGCGAATTTTTGTGAAGTTTTTGAAAACCCTTGTGTAATTTTCTCCCGTAGCAGGATTTCTCTAGCCTTCTCGCAAGATTTCTCCCATCGGATTCTGAATTTTTCTTTCATCGTTTTGATTTCTCTTTTTATTTCATCTTTTTTTTTCATCTTTTCTCCATATTTTCTGAACTTTTGAAAATTTATTATTTCTTTCCGGTTGCGCTTCGCCTACGAAAAGCGTGCGCTTTGCGCTTAAGCTCCAGGGCCCTTTTGCGCTTCAGTGTGCTTCGCGCTTTTTAAAACTAAGGTCGGACACTTGGACATGCACATGTGTCCGGCGCTAGTACCCGAGTCTGAGTAACATAGTATCTGGGTGATTGGAAGTTTGGAAACGAAGAAGTTTGAATCAAACTGAGATAATGTTACAGCTGAAAATTGTCAGTCTAGGCTCTTAATTAGAACAGATACTACTTGTCCACTGCTGCCTATCTTATGTGTGAGATCTGATAAATATTTCGGGGAAGCGGGATTCTTGAGTTTGATGAATCTGAATATTTGGCATTAGATTTCCGTTGCATGAAGTTATCCTATTGCATTGAGAATATACATGTCCGGATAAGCTCAGTCAAAATGACTCAGATAAGTTAGCATAAGTCTGGATAATATAACTACAGAAAAATTAACTCCAAAAGGACAAAGCCTTAATTTTTGCCACGTGCTTTTAGCAACCTTCTCATTAGCTTTTGGTAGAAAGGGGCTATTGCTGTAGGAGTAGTGATCTTGTCCAATGTTTTGCTTTGTTCTTGTATACGTATGATCTGCTTACTTTCGTGTCAATGTGGATGGCATGTTTATCATACGCCTCACCTTTGTGAAAAGGAATACACCATGCACCTTTTTGGCTACACATAATATAATTGCAATTTAGAGAACATTATTCTATATACTTCCCTTGCACCATTTCTTCATTTCCTTATAGTACAGGGGAAGGGGTTTGTTTGAGTGTTGGGTGACCAGCCAGTCTTTTTCTCTCTCCCAGCTTCATCCTTATGTTGTTAATTTTGATCCATTTTTTCATAACATTCTTTATCCTGTGATTTGCCTTGCTTTTTGGTCTATACAATGAGTGCCTATAGTACTTTTTTGGGTTATTATAAGTTTGTAGCAGCAAAGTTTGCTTTGAGAAGATCTTTGTTTTTTGTAGGGAAAATCTTACAGTCCCTGACTCCCTGTCCCTGATAAATTCTTCACTAGCTTCATTTTCAGTAATTTGCATGCTTTAAAAGTATTGTTTTTGCACTGGCTTTATTTGCTTACTACTCTGTAATAGATGAGGCTTGAGAGAGTGATTTGCTTATTGTAGTGTCTAATACGTTTTTAATCCTTATGTTGAACAGAGCCAATGCACAGCAGCCAAAACTTTTTGTTGGGATGATTCTTATTCTCATCTTTGCTGAAGCACTTGCTCTCTATGGTCTCATTGTCGGCATCATCTTGTCATCCCGAGCTGGACAATCAAGAGCAGATTAAGTACAGTACTGGACTTTTGTTCAGTTATGTTGTATTGTTCAATGCGGAGTGAAACAACATTTTGCCCTTTCTACTTGCTTTCCTCTTCCATTTTTCCCCTCTGGTGAAGGGCAGAGATATCCAGGTTTATATTTGTTATTAGATTAAGTACGGTGAGACTCTGTTTTAATGTTTTTCTTTGAAATATATTATGGTGGCAAAATACTGCTCTACCGAATTCATTTTATACTCTGCTGCTATTTTTAGCGCTAGGCTCTTGCAGAATAAAATTGCTTGTGAATTCTTTTTCAGTTTATCGTTTTCTGTATGCGTTTCACTGGATTTTACCTAAGATGTTTAAACAGGTATATAGATGTTTAAACCATTCAAAAATTGTTGTTCATGAACACCAAATGAAAAATCAATTTCATGCATGGAAGACTTGACATGTGGCATATGGAGGGGATCAAACAATATTGTTTTTTTAAAAATGCAAAGTGACATTTTGATATGGTTTTTTGATTACAAAGTGATATTTTAGAGATGGTGTTTGATAAATGTGGTTACATGTTGTTGGTAGGGGTGTTCATCGGTCCAAACCCGGACCAGACCGATGACCGAATTTTGATAATGTAAGACCCGAAGACCGGACCGATTACGCTTGGACCGAACCCGGACCAGACCGAAAAAATCGGTCCAAAACCCGGACCGGACCGGTTTGGACCTATTTCTATATATATTTTATTTTTTCTAAAAAATATGGTAAAAAAGAAAAAGTATATATAAAAAGCCAATTGTTTAAGGCCTTTTTCGGAAGCTAAAATAAAATATATTTCCTCCA ACGAAGTTTCCTACAGTTTTGTTCCAAAACAAACACCCCAACAAAATTGCCCAAAATAATTTATATCACGTGAAATTACAATTAATTTATAAAAATAAAAGGAAAAGAAAAGAAAAGTTAATCAACACAAATTTGTCTTCTCTATATCCTCCTCATCTTTCATCCTGTCTCTCCTGATCTCCTCTCCACTCCTCTCCTCTCGTTTTCAATTCTCAGATCGGATCAAGCTATTTTAATCAAACACCTTCCGATCACCAGAAAATCATGTCTACTGCAGTCTTCAACGGCGATGAAACGGCGCCATTCTTCGGCTTTCTTGGTGCCGCAGCTGCTCTAGTTTTCTCCTGTATGGGAGCAGCATATGGGACAGCAAAAAGTGGGGTTGGAGTAGCATCAATGGGAGTGATGAGGCCAGAGCTTGTGATGAAGTCAATAGTTCCAGTTGTTATGGCTGGAGTTTTGGGTATCTATGGGTTGATTATTGCTGTGATTATTAGTACCGGGATTAACCCTAAAGCTAAATCGTATTACCTTTTTGATGGTTATGCCCATCTTTCATCTGGTCTGGCTTGTGGTCTTGCTGGTTTATCTGCTGGTATGGCTATTGGTATTGTTGGTGATGCTGGTGTTAGAGCCAATGCACAGCAGCCAAAACTTTTTGTTGGGATGATTCTTATTCTCATCTTTGCTGAAGCACTTGCTCTCTATGGTCTCATTGTCGGCATCATCTTGTCATCCCGAGCTGGACAATCAAGAGCAGATTAAGTACAGTACTGGACTTTTGTTCAGTTATGTTGTATTGTTCAATGCGGAGTGAAACAACATTTTGCCCTTTCTACTTGCTTTCCTCTTCCATTTTTCCCCTCTGGTGAAGGGCAGAGATATCCAGGTTTATATTTGTTATTAGATTAAGTACGGTGAGACTCTGTTTTAATGTTTTTCTTTGAAATATATTATGGTGGCAAAATACTGCTCTACCGAATTCATTTTATACTCTGCTGCTATTTTTAGCGCTAGGCTCTTGCAGAATAAAATTGCTTGTGAATTCTTTTTCAGTTTATCGTTTTCTGTATGCGTTTCACTGGATTTTACCTAAGATGTTTAAACAGGTATATAGATGTTTAAACCATTCAAAAATTGTTGTTCATGAACACCAAATGAAAAATCAATTTCATGCATGGAAGACTTGACATGTGGCATATGGAGGGGATCAAACAATATTGTTTTTTTAAAAATGCAAAGTGACATTTTGATATGGTTTTTTGATTACAAAGTGATATTTTAGAGATGGTGTTTGATAAATGTGGTTACATGTTGTTGGTAGGGGTGTTCATCGGTCCAAACCCGGACCAGACCGATGACCGAATTTTGATAATGTAAGACCCGAAGACCGGACCGATTACGCTTGGACCGAACCCGGACCAGACCGAAAAAATCGGTCCAAAACCCGGACCGGACCGGTTTGGACCTATTTCTATATATATTTTATTTTTTCTAAAAAATATGGTAAAAAAGAAAAAGTATATATAAAAAGCCAATTGTTTAAGGCCTTTTTCGGAAGCTAAAATAAAATATATTTCCTCCA ATGTCTACTGCAGTCTTCAACGGCGATGAAACGGCGCCATTCTTCGGCTTTCTTGGTGCCGCAGCTGCTCTAGTTTTCTCCTGTATGGGAGCAGCATATGGGACAGCAAAAAGTGGGGTTGGAGTAGCATCAATGGGAGTGATGAGGCCAGAGCTTGTGATGAAGTCAATAGTTCCAGTTGTTATGGCTGGAGTTTTGGGTATCTATGGGTTGATTATTGCTGTGATTATTAGTACCGGGATTAACCCTAAAGCTAAATCGTATTACCTTTTTGATGGTTATGCCCATCTTTCATCTGGTCTGGCTTGTGGTCTTGCTGGTTTATCTGCTGGTATGGCTATTGGTATTGTTGGTGATGCTGGTGTTAGAGCCAATGCACAGCAGCCAAAACTTTTTGTTGGGATGATTCTTATTCTCATCTTTGCTGAAGCACTTGCTCTCTATGGTCTCATTGTCGGCATCATCTTGTCATCCCGAGCTGGACAATCAAGAGCAGATTAA MSTAVFNGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo03251.1 vs. NCBI nr
Match: gi|902173363|gb|KNA08252.1| (hypothetical protein SOVF_164250 [Spinacia oleracea]) HSP 1 Score: 303.1 bits (775), Expect = 2.900e-79 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 1
BLAST of Spo03251.1 vs. NCBI nr
Match: gi|30144705|gb|AAP15165.1| (vacuolar H(+)-ATPase subunit c [Suaeda salsa]) HSP 1 Score: 297.4 bits (760), Expect = 1.600e-77 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 1
BLAST of Spo03251.1 vs. NCBI nr
Match: gi|567885121|ref|XP_006435119.1| (hypothetical protein CICLE_v10002710mg [Citrus clementina]) HSP 1 Score: 297.0 bits (759), Expect = 2.100e-77 Identity = 162/166 (97.59%), Postives = 165/166 (99.40%), Query Frame = 1
BLAST of Spo03251.1 vs. NCBI nr
Match: gi|1021036478|gb|KZM94261.1| (hypothetical protein DCAR_017504 [Daucus carota subsp. sativus]) HSP 1 Score: 296.6 bits (758), Expect = 2.700e-77 Identity = 162/166 (97.59%), Postives = 164/166 (98.80%), Query Frame = 1
BLAST of Spo03251.1 vs. NCBI nr
Match: gi|733214298|ref|NP_001290014.1| (V-type proton ATPase 16 kDa proteolipid subunit [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 296.2 bits (757), Expect = 3.600e-77 Identity = 162/164 (98.78%), Postives = 163/164 (99.39%), Query Frame = 1
BLAST of Spo03251.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QPD7_SPIOL (V-type proton ATPase proteolipid subunit OS=Spinacia oleracea GN=SOVF_162570 PE=3 SV=1) HSP 1 Score: 303.1 bits (775), Expect = 2.000e-79 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 1
BLAST of Spo03251.1 vs. UniProtKB/TrEMBL
Match: G4XKY1_9CARY (V-type proton ATPase proteolipid subunit OS=Suaeda corniculata GN=VHA-C PE=2 SV=1) HSP 1 Score: 297.4 bits (760), Expect = 1.100e-77 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 1
BLAST of Spo03251.1 vs. UniProtKB/TrEMBL
Match: Q84MJ9_SUASA (V-type proton ATPase proteolipid subunit OS=Suaeda salsa PE=2 SV=1) HSP 1 Score: 297.4 bits (760), Expect = 1.100e-77 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 1
BLAST of Spo03251.1 vs. UniProtKB/TrEMBL
Match: Q9ZQS2_CITUN (V-type proton ATPase proteolipid subunit OS=Citrus unshiu GN=CitVATP c-3 PE=2 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 1.500e-77 Identity = 162/166 (97.59%), Postives = 165/166 (99.40%), Query Frame = 1
BLAST of Spo03251.1 vs. UniProtKB/TrEMBL
Match: A0A067GYW6_CITSI (V-type proton ATPase proteolipid subunit OS=Citrus sinensis GN=CISIN_1g031073mg PE=3 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 1.500e-77 Identity = 162/166 (97.59%), Postives = 165/166 (99.40%), Query Frame = 1
BLAST of Spo03251.1 vs. ExPASy Swiss-Prot
Match: VATL_MESCR (V-type proton ATPase 16 kDa proteolipid subunit OS=Mesembryanthemum crystallinum GN=VMAC1 PE=2 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 2.200e-79 Identity = 162/164 (98.78%), Postives = 163/164 (99.39%), Query Frame = 1
BLAST of Spo03251.1 vs. ExPASy Swiss-Prot
Match: VATL_BETVU (V-type proton ATPase 16 kDa proteolipid subunit OS=Beta vulgaris GN=VMAC1 PE=2 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 2.200e-79 Identity = 162/164 (98.78%), Postives = 163/164 (99.39%), Query Frame = 1
BLAST of Spo03251.1 vs. ExPASy Swiss-Prot
Match: VATL_KALDA (V-type proton ATPase 16 kDa proteolipid subunit OS=Kalanchoe daigremontiana PE=2 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 1.900e-78 Identity = 160/164 (97.56%), Postives = 163/164 (99.39%), Query Frame = 1
BLAST of Spo03251.1 vs. ExPASy Swiss-Prot
Match: VATL_VIGRR (V-type proton ATPase 16 kDa proteolipid subunit OS=Vigna radiata var. radiata PE=2 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 1.900e-78 Identity = 161/163 (98.77%), Postives = 162/163 (99.39%), Query Frame = 1
BLAST of Spo03251.1 vs. ExPASy Swiss-Prot
Match: VATL4_ARATH (V-type proton ATPase subunit c4 OS=Arabidopsis thaliana GN=VHA-c4 PE=2 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 1.900e-78 Identity = 160/166 (96.39%), Postives = 165/166 (99.40%), Query Frame = 1
BLAST of Spo03251.1 vs. TAIR (Arabidopsis)
Match: AT1G19910.1 (ATPase, F0/V0 complex, subunit C protein) HSP 1 Score: 291.2 bits (744), Expect = 4.000e-79 Identity = 159/163 (97.55%), Postives = 162/163 (99.39%), Query Frame = 1
BLAST of Spo03251.1 vs. TAIR (Arabidopsis)
Match: AT2G16510.1 (ATPase, F0/V0 complex, subunit C protein) HSP 1 Score: 291.2 bits (744), Expect = 4.000e-79 Identity = 159/163 (97.55%), Postives = 162/163 (99.39%), Query Frame = 1
BLAST of Spo03251.1 vs. TAIR (Arabidopsis)
Match: AT4G38920.1 (vacuolar-type H(+)-ATPase C3) HSP 1 Score: 291.2 bits (744), Expect = 4.000e-79 Identity = 159/163 (97.55%), Postives = 162/163 (99.39%), Query Frame = 1
BLAST of Spo03251.1 vs. TAIR (Arabidopsis)
Match: AT4G34720.1 (ATPase, F0/V0 complex, subunit C protein) HSP 1 Score: 291.2 bits (744), Expect = 4.000e-79 Identity = 159/163 (97.55%), Postives = 162/163 (99.39%), Query Frame = 1
BLAST of Spo03251.1 vs. TAIR (Arabidopsis)
Match: AT1G75630.2 (vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4) HSP 1 Score: 257.7 bits (657), Expect = 5.000e-69 Identity = 152/200 (76.00%), Postives = 161/200 (80.50%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo03251.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo03251.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo03251.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo03251.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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