Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTGACCTTTACTTTCCTCCATTTCCATTTCACTCTTTCTCCTCTTTAAACCCGAAAATGGCGGTCTGTAGGACTAAAACCTTGTTATTGTTACTCCTCCTAGTTTCCCTTTGCAACACTTTGGATCTATGCATTGGGCAGCAATCCCCTGCCTCTGACCACGCTTGTTCCCATGGTCACCATCATCACCATGACCATGGAAACTCCCACCATCATCATGATCATGATGATGTTGATCTATCCGTTAGTAATAAAAGGAAGTTGCTCCCAGAGGAGCTTGCTGAGGAAGAAGACCTTAAACTTTTCGGCTTTGCATCGGACCATCACGACCACCACCACCACCACCACCACCACCACCATGAAGATCACCTTGATGGGTCCCACTCCAATCTCACCGGAATTCGTAATTTCTTCTCCAATTTCTGTTTTTCTAAATTCAGTAAATTTTCGATCTTGTTTTTGAAAATGCCTTAATTTCTGGTGGGAGATTTTAATTGGGGATGTTTGGAAATTGGGGTTCTTATGCTCTACATTGGGTTTTTAATTTTTTGAATTATTAATCTGAGTTGCATTTTTTCAGTAATGATTATTATTATTTGTTGAAACAGAACTTTGGATTAATGCAATGGGGTGTTCCCTTTTGGTGAGCTTGGCTTCACTTATCTGCTTGACCATTGTTCCTATCTTATGTGGTGAGTTTACTCTTAAATCTTTCTTTTTCGTTTTGTTTAGTGGAGCCATACAGATCAAATAATGTAGACTTGATTCTATTCTCTTAGTAGATTTTACCATTTAAGCTAGCTGATGCCTGAGGGGGAGGGGTTAGTAGTAATTGATTTCATTTTGGAATTGGGTATGAAGAACTTTTGCTGTGAATGTGTAAACATGTGCTGATGCTTTGTTTAATGAATGACATTGCGTTTTTGGATTAATGTCTTTTTTGATCGTCCTGCAATAATGAAGATGTACTCTATACCTAGAAGTGTTAGTGATGATAGAATTTCTGAATTTAGGGATTTACACATTTGAATGGGCTGTAAGTTTGAAGACTGCCAAATTCTTCTACAATTTAATGTATTTCCTGATTTTGTTCGAACGGAAAGCTGAAAGCCTGAAACCTTATTTTTTTTCTTTCTTTCTTTGTAGCACATGGCAAACCATCCAAGGCTGTCGTTGATGCATTGGCGCTATTTGGGGTCAGGTTTCTTTGAGCTTTATGAGAATAGATGCCCTTTGAGGTTTTTGGTGTGTGATTTTTGGCCAAGCATTGGTGATATTAACACAATAGGAACTACCTTTGATGCTCTTTGTTTGTGTTCTTATGTTTGAGATTGGTGATATTAGCTTCGTTTAGCTATGAATGGAAGTCATATTCAAAGAGTATTTCTGGGTTCACTGGATTCGTGTTGACTTGTTTCTCATTCCCCTCTTTAAGTCGGATGCTTACAGTATATTGGTATGCTTTCTGTGTCTGCAGGCTGGTGCCATGCTGGGGGATGCCTTTTTGCACCAATTACCTCATGCTTTCAGTAAGCTTTTGGATGACTAGTTATATTTGTTACTGAAACTATACTTTATTTTCACAATTTTGTACGGCAACAATTGGCATCAAACTACCGTTTGTCAGCATACCCTTGTTTGGATAATTGAAGGGAAGAAAGAGGGGAGGGAAGGAGTGGTAAGGGAAGGGAACCTTTACTTTTTTTAAACTTTCCAATTTGAGAGGATTTGATTCATCTGAGGGATCAAAACTTAAGGATAACTAGAGTCTTTATCTGAAATTCTGAATTACTTCATCCGTTCATTGATCGGTATAACTTGGTCCAATTATAGTGATGCCTACTGATACTTGTTATCTACTCAAAGCAGTGACAGGGAACCACAATAAAGCACCATTGACATCCTGTACTACATCAAATGATTATGGTGTTATCCACTTATCCCAAACAATAATGGAATCAAATTAAATTATTCATGGAAAAGAAGCAGTGTAGTTGTGTAGGTGGAGGGAGATCGGAAGGGTTTTAATTTCTAGTTTGATTTGTGCAAGGTATTTAATGAGAGAGCAGTTGAGGTTTAGTATCTTCATGCATGCCTATCATGTATAACCTGGGTCTTCTCAAGAATTTATCACTTAAGTGAACTGTGAATGTTTATTCCTGCTATACATTATCGTTGTTAAGTGAGCAGGCGTGTTGTATTTAAGGTGTATGGCTTCTGTACAGGTGGTGGGCACTCTCATTCACATGATGATCATGCTCATTCTGAAGATTCACATTCGCATTCTCATGCTCATTCCCTGAAAGATCTGTCCATTGGACTGTCAGTCCTAAGTAAGTGCCTTTTCTGTATGTTTCACCTTGGTTCTCCACCAAGGCCTGCGTGTTACCACTTTCAACCTTTGCCATTGTCTTTAATGTTTAAGTGACCTTTGTAGATTGTAATCTTTTCGAAAGGTTCATTAACGTCTTTACGGAATTTCTCCATTGAAGGTTTCTAAACCTAAATCATTATGCTCTATTGTTATAGTTCTGATTTTGCCTTCTGTTTGAGTGAGATGAGTTTAGTATCATTTTTTTGTGTGTACGTATTCTCCACCTTCCTTCTCCTGTCATATAGTGTTCATCCTTGGGGTAAACTATACTTGGGACATACTGTCAATGGTCATGGCTCTGCTAGTTGGCTTATCGTACATGACAATATTCAACATTCCAGGAAGCAGTATCATCTTATAACTGAAGTTGCAGAAAGTTCCTTCAGCAATAGAATACAGAAACTTATTGTTGATTTACCTTTGAAAAGCCGAATTTTGTTGATGCCTGTCTTAGTGAATGTAAATGATTAATTGATTGATACCAATTTGCATGTAGGTATTGGTGTTTATGATTAGTCAGATTCGGTTCTAATAGAGCTGGGTATTTTTGTAAAAAAGTTATTTGTAGCCAAATTTAGTTTAAGTTGATTCTCAACTGGGATAAAATCACTGAAGATTACTTGATCATTTTTGTATCTGAACTTTGTCACTTTGTGTTCATTTTCTAAATAGAGTTATGGCATTGTACTAGTTCTGTTCATAATAACCATAAGCCTCCATGTCCTCTTGGTCCCTTGCTGCATTGGGAAGGCACTGTTATTTTTTTATCTTAAACTTATTTAGGATTAATAATTGCTTCATTGTCTTGTATCTGCGCTGATAATAATTACATGTGGCTTTTATTAACTTAGGCTCGAAATTTCGTGGAACAATTGTTGGGGCTCCTGCAAGTCAATTAAATGTTACGGATTAGAATATTGCAAATATCTTATTCTACTATATTTTCTGCGGCAGCTGGCATTGTAGTTTTCCTGATCGTGGAGAAGATTGTTAGGTTTGTTGAAGAAGTTTCTGGAGGTGAACATTCAGGGACTCATTCTCACCATCATCACCGCCATAAAAAAAGCAGTAAAAAACTGAAGGATGATGATGATATTGATGAGAAATCATCAGAGAAGCCATCTAAACAGAAATTATTAAATGGAGCTGCTGATGCAACTTCAAAATCAAAGCAAGTTGCTGGGTCCCGGTCTGAATTAAAGAAGGTGAACTCTTTCGCCTGAACTATTCACAATGCTGCTTGCTCAATAGGCTACTATTTAGCATAAAATATTCGGCAATATTTGCCTACACATAATGCCTTCTGCTAAAAGTGCTCTCCTCGCGTCTATATCAGTATCCCAGAAAATAGGCACATGTAGTTTGTCTATTGCCAGCTGATACATTTTAATGAAACAGACTTCCCCAATCGTGATTATAAAGCAATAGGTTTATGTTGTGTGGTTATAAAGTACTTTCACTCCTCTGTAGCTTCTGATAATTGGTCATGTCAATGAGTTAGATATAAACTAAATTTTTAAATTTCAATTATAATCCCTCCTGCCCTCACTTGGTCTGCAGAGAAACAAAAATGGCAACACCAGTGGTGACAAGTCAGACATAGATGCCGCTGATGGCAAAGTAGGAGAAGCAAAGCCTACAAAACAGCCATCCAACCTGGTCTTTGGATATCTCAATCTCTTCTCTGATGGTGTGGTAAGTTTGTGTTATATAGTGAATTTGCTGAAAATTGAATTGGTGTTTTGGATTTGCGATCAAGAGTGAACCTTTTGCTGTTATGACGAAAAGAGAATCGTCTCTGATGTGATAATATGTTTAAATTGTTGCAGCATAATTTTACTGATGGCATGGCCTTGGGAAGTGCATTTTTACTTTATGGATCTGTCGGTGGATGGTCTAGAACAATTTTCTTGCTTGCTCATGAACTCCCTCAAGAGGTACTTCTTGAATAA TTGACCTTTACTTTCCTCCATTTCCATTTCACTCTTTCTCCTCTTTAAACCCGAAAATGGCGGTCTGTAGGACTAAAACCTTGTTATTGTTACTCCTCCTAGTTTCCCTTTGCAACACTTTGGATCTATGCATTGGGCAGCAATCCCCTGCCTCTGACCACGCTTGTTCCCATGGTCACCATCATCACCATGACCATGGAAACTCCCACCATCATCATGATCATGATGATGTTGATCTATCCGTTAGTAATAAAAGGAAGTTGCTCCCAGAGGAGCTTGCTGAGGAAGAAGACCTTAAACTTTTCGGCTTTGCATCGGACCATCACGACCACCACCACCACCACCACCACCACCACCATGAAGATCACCTTGATGGGTCCCACTCCAATCTCACCGGAATTCAACTTTGGATTAATGCAATGGGGTGTTCCCTTTTGGTGAGCTTGGCTTCACTTATCTGCTTGACCATTGTTCCTATCTTATGTGCACATGGCAAACCATCCAAGGCTGTCGTTGATGCATTGGCGCTATTTGGGGCTGGTGCCATGCTGGGGGATGCCTTTTTGCACCAATTACCTCATGCTTTCAGTGGTGGGCACTCTCATTCACATGATGATCATGCTCATTCTGAAGATTCACATTCGCATTCTCATGCTCATTCCCTGAAAGATCTGTCCATTGGACTGTCAGTCCTAACTGGCATTGTAGTTTTCCTGATCGTGGAGAAGATTGTTAGGTTTGTTGAAGAAGTTTCTGGAGGTGAACATTCAGGGACTCATTCTCACCATCATCACCGCCATAAAAAAAGCAGTAAAAAACTGAAGGATGATGATGATATTGATGAGAAATCATCAGAGAAGCCATCTAAACAGAAATTATTAAATGGAGCTGCTGATGCAACTTCAAAATCAAAGCAAGTTGCTGGGTCCCGGTCTGAATTAAAGAAGAGAAACAAAAATGGCAACACCAGTGGTGACAAGTCAGACATAGATGCCGCTGATGGCAAAGTAGGAGAAGCAAAGCCTACAAAACAGCCATCCAACCTGGTCTTTGGATATCTCAATCTCTTCTCTGATGGTGTGCATAATTTTACTGATGGCATGGCCTTGGGAAGTGCATTTTTACTTTATGGATCTGTCGGTGGATGGTCTAGAACAATTTTCTTGCTTGCTCATGAACTCCCTCAAGAGGTACTTCTTGAATAA ATGGCGGTCTGTAGGACTAAAACCTTGTTATTGTTACTCCTCCTAGTTTCCCTTTGCAACACTTTGGATCTATGCATTGGGCAGCAATCCCCTGCCTCTGACCACGCTTGTTCCCATGGTCACCATCATCACCATGACCATGGAAACTCCCACCATCATCATGATCATGATGATGTTGATCTATCCGTTAGTAATAAAAGGAAGTTGCTCCCAGAGGAGCTTGCTGAGGAAGAAGACCTTAAACTTTTCGGCTTTGCATCGGACCATCACGACCACCACCACCACCACCACCACCACCACCATGAAGATCACCTTGATGGGTCCCACTCCAATCTCACCGGAATTCAACTTTGGATTAATGCAATGGGGTGTTCCCTTTTGGTGAGCTTGGCTTCACTTATCTGCTTGACCATTGTTCCTATCTTATGTGCACATGGCAAACCATCCAAGGCTGTCGTTGATGCATTGGCGCTATTTGGGGCTGGTGCCATGCTGGGGGATGCCTTTTTGCACCAATTACCTCATGCTTTCAGTGGTGGGCACTCTCATTCACATGATGATCATGCTCATTCTGAAGATTCACATTCGCATTCTCATGCTCATTCCCTGAAAGATCTGTCCATTGGACTGTCAGTCCTAACTGGCATTGTAGTTTTCCTGATCGTGGAGAAGATTGTTAGGTTTGTTGAAGAAGTTTCTGGAGGTGAACATTCAGGGACTCATTCTCACCATCATCACCGCCATAAAAAAAGCAGTAAAAAACTGAAGGATGATGATGATATTGATGAGAAATCATCAGAGAAGCCATCTAAACAGAAATTATTAAATGGAGCTGCTGATGCAACTTCAAAATCAAAGCAAGTTGCTGGGTCCCGGTCTGAATTAAAGAAGAGAAACAAAAATGGCAACACCAGTGGTGACAAGTCAGACATAGATGCCGCTGATGGCAAAGTAGGAGAAGCAAAGCCTACAAAACAGCCATCCAACCTGGTCTTTGGATATCTCAATCTCTTCTCTGATGGTGTGCATAATTTTACTGATGGCATGGCCTTGGGAAGTGCATTTTTACTTTATGGATCTGTCGGTGGATGGTCTAGAACAATTTTCTTGCTTGCTCATGAACTCCCTCAAGAGGTACTTCTTGAATAA MAVCRTKTLLLLLLLVSLCNTLDLCIGQQSPASDHACSHGHHHHHDHGNSHHHHDHDDVDLSVSNKRKLLPEELAEEEDLKLFGFASDHHDHHHHHHHHHHEDHLDGSHSNLTGIQLWINAMGCSLLVSLASLICLTIVPILCAHGKPSKAVVDALALFGAGAMLGDAFLHQLPHAFSGGHSHSHDDHAHSEDSHSHSHAHSLKDLSIGLSVLTGIVVFLIVEKIVRFVEEVSGGEHSGTHSHHHHRHKKSSKKLKDDDDIDEKSSEKPSKQKLLNGAADATSKSKQVAGSRSELKKRNKNGNTSGDKSDIDAADGKVGEAKPTKQPSNLVFGYLNLFSDGVHNFTDGMALGSAFLLYGSVGGWSRTIFLLAHELPQEVLLE Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo03353.1 vs. NCBI nr
Match: gi|902116682|gb|KNA03906.1| (hypothetical protein SOVF_204660, partial [Spinacia oleracea]) HSP 1 Score: 713.0 bits (1839), Expect = 2.800e-202 Identity = 376/378 (99.47%), Postives = 376/378 (99.47%), Query Frame = 1
BLAST of Spo03353.1 vs. NCBI nr
Match: gi|731353373|ref|XP_010688031.1| (PREDICTED: IAA-alanine resistance protein 1 isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 535.4 bits (1378), Expect = 8.000e-149 Identity = 299/383 (78.07%), Postives = 328/383 (85.64%), Query Frame = 1
BLAST of Spo03353.1 vs. NCBI nr
Match: gi|731353375|ref|XP_010688032.1| (PREDICTED: IAA-alanine resistance protein 1 isoform X2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 535.4 bits (1378), Expect = 8.000e-149 Identity = 299/383 (78.07%), Postives = 328/383 (85.64%), Query Frame = 1
BLAST of Spo03353.1 vs. NCBI nr
Match: gi|255561803|ref|XP_002521911.1| (PREDICTED: IAA-alanine resistance protein 1 [Ricinus communis]) HSP 1 Score: 364.0 bits (933), Expect = 3.200e-97 Identity = 226/390 (57.95%), Postives = 269/390 (68.97%), Query Frame = 1
BLAST of Spo03353.1 vs. NCBI nr
Match: gi|568878640|ref|XP_006492294.1| (PREDICTED: IAA-alanine resistance protein 1 [Citrus sinensis]) HSP 1 Score: 364.0 bits (933), Expect = 3.200e-97 Identity = 233/398 (58.54%), Postives = 276/398 (69.35%), Query Frame = 1
BLAST of Spo03353.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QBI1_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_204660 PE=4 SV=1) HSP 1 Score: 713.0 bits (1839), Expect = 2.000e-202 Identity = 376/378 (99.47%), Postives = 376/378 (99.47%), Query Frame = 1
BLAST of Spo03353.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BNP6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g194780 PE=4 SV=1) HSP 1 Score: 535.4 bits (1378), Expect = 5.600e-149 Identity = 299/383 (78.07%), Postives = 328/383 (85.64%), Query Frame = 1
BLAST of Spo03353.1 vs. UniProtKB/TrEMBL
Match: B9S7E2_RICCO (Iaa-alanine resistance protein, putative OS=Ricinus communis GN=RCOM_0778070 PE=4 SV=1) HSP 1 Score: 364.0 bits (933), Expect = 2.200e-97 Identity = 226/390 (57.95%), Postives = 269/390 (68.97%), Query Frame = 1
BLAST of Spo03353.1 vs. UniProtKB/TrEMBL
Match: A0A0A0KQS8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G257690 PE=4 SV=1) HSP 1 Score: 359.0 bits (920), Expect = 7.200e-96 Identity = 216/367 (58.86%), Postives = 265/367 (72.21%), Query Frame = 1
BLAST of Spo03353.1 vs. UniProtKB/TrEMBL
Match: K4BNZ0_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 358.2 bits (918), Expect = 1.200e-95 Identity = 219/366 (59.84%), Postives = 256/366 (69.95%), Query Frame = 1
BLAST of Spo03353.1 vs. ExPASy Swiss-Prot
Match: IAR1_ARATH (IAA-alanine resistance protein 1 OS=Arabidopsis thaliana GN=IAR1 PE=1 SV=3) HSP 1 Score: 324.3 bits (830), Expect = 1.800e-87 Identity = 215/405 (53.09%), Postives = 261/405 (64.44%), Query Frame = 1
BLAST of Spo03353.1 vs. ExPASy Swiss-Prot
Match: S39A7_MOUSE (Zinc transporter SLC39A7 OS=Mus musculus GN=Slc39a7 PE=1 SV=2) HSP 1 Score: 114.0 bits (284), Expect = 3.600e-24 Identity = 129/368 (35.05%), Postives = 178/368 (48.37%), Query Frame = 1
BLAST of Spo03353.1 vs. ExPASy Swiss-Prot
Match: S39A7_HUMAN (Zinc transporter SLC39A7 OS=Homo sapiens GN=SLC39A7 PE=1 SV=2) HSP 1 Score: 107.8 bits (268), Expect = 2.600e-22 Identity = 116/358 (32.40%), Postives = 165/358 (46.09%), Query Frame = 1
BLAST of Spo03353.1 vs. ExPASy Swiss-Prot
Match: CSUP_DROME (Protein catecholamines up OS=Drosophila melanogaster GN=Catsup PE=2 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 1.700e-21 Identity = 93/251 (37.05%), Postives = 127/251 (50.60%), Query Frame = 1
BLAST of Spo03353.1 vs. ExPASy Swiss-Prot
Match: S39A7_CANLF (Zinc transporter SLC39A7 OS=Canis lupus familiaris GN=SLC39A7 PE=3 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 2.200e-21 Identity = 120/356 (33.71%), Postives = 174/356 (48.88%), Query Frame = 1
BLAST of Spo03353.1 vs. TAIR (Arabidopsis)
Match: AT1G68100.1 (ZIP metal ion transporter family) HSP 1 Score: 324.3 bits (830), Expect = 9.900e-89 Identity = 215/405 (53.09%), Postives = 261/405 (64.44%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo03353.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo03353.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo03353.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo03353.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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