Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGTTCCATAATCTCCCCTTTCTCATTTTCAAACACCACAACATCAGGTAGCTCCTGCTGCAATCCGACCTCGATAAGAACTCCAGCAAATAGCAATTTCTCTCATTTTAGAGTTGCTTGATCCACTTTCACATACTTCCCCACCAATCCTGCAATTTTGGACAAACTCCTTTCCCCCCAATACTTAAAATCAAGGGAAGGAAATTGCACCCAAATTGGAATTATTTTGATCTCATCCTTAGCCACATTCATATCAGCAGTCCATGGTTTTATAATCAAAGGTTTTTTATCAAAAAATTGACACCCATATTTCAGGATTTTATCCCTATTTCCAACAGTCGTCATCCGAACAATGAACACACCCTTCCCCAATGAGCAACCTTATCCACACCCAATTTCCCCCAAATTTGGCGAACGAATCCCTCCATAATGTGATTGGGAGGATTTGCTCCAAGAATATAACAAACAATGGAAGAATCCCAAAATTGAATTTCATCTTGTATATCCTCTAGGTCAGGTTCGTACTTTGCTGTTTCATATTATTGTCAAACTTTAGAACTCTTAACTATGCATCGTAATTTTATATTTTGCTCGTGTCTATTTTGCAGTGTAGATGGAAAGTATCTGGTCTCTTTAGGAAGTGGTGGTCCTTGCAAGGTTTGGGATGTAACTTCATCAAAAGCTGTAGCTACTTTACCCAAGGAGAATGTGAGAACTGTAATCAAACTTATATGTTTCCAATATTATTTTTAGGTTGTAATTTTATTTTTAAATACAGAAAGGAGTCTTATTTTATTCAGAATTGTTATACTTCATATGACCTTTGATTTGGACCTGCGGTGGGTCATGGTTGTTTATCTTAGCATAAAATTCAAACGAAGTTGTCCTCATTTTCCTTTCAATTTGGTTGTAGGCTTGTAGCCATTTAATCTGCATTTGTTAAACTTGATAATGTTTGGTGCAGGATGAGAATTTCAGGTTTTGCAGATTTTCTCAAAGTAGTGAAAGGGACCAGGTTCTGTACACAATTGCTATGCGAGGTAAAGACTTATTTGCTAACTGCTATTGTGCTCTTATGATCTTACATATGATCAATCTTCATAAGAGTGGTTGATGAACTTTGCTTTAAAATGTAGATAAAGGTGGGAGTATAATATCGTGGAACACCAGATCCTGGAAAAGAATAGCTTCAAAGCATATCGGCCGGGATGCAGTTACTGCATTTAATGTCTCAGTTGATGGAAAGCTTCTAGCCATGTAAGTGTTGCTTTTTTTTTTCTTTCTTTTGCTCTTTTGGTCAATTTCTTCATCTGTTTTATATATGTAGGGTTAATCATTCATGATTTTGTAGAATGTGTAGGGTTAATCATTCATGATTTTCTAGCTAGAACTACACGCGACTTGATTCCAAATTAAGTTTACTTAAGGCGGATACGTAGGCAATCCAAACTAGGATTTAGTCCAAATAATTTGCAAAAATTTATAAGTCTGCAAGCAATGACGAAAACAAAAAACAAATGTCTTTATTGAATTTAAATAAGTTTGCAAACCAAACTAAAAAAAAAACTAAGTGCAAAAGCAAAATAAAAAGCCAACATCGAAAATTAAAAGGGGCACATAAAAGAAAGAGAAGTTAAGGTCGGTAGGCAGGGGGAGTTCACCGCAACGAAAGTCAGCGCTGTTGCCTGTTGGATAGAAGACTGGTAGAGAATTCTCTGGCAAGTCTTAGGTTAGGGATGAGACACCCGCGCAAGGACCGAATTTTTCCACATTCTTTCGCGTGTTCAACCACGCAAGTCTACTTCTCTTCTTCCTGTATCTTCGCTCTTCCAGCCCCTCGGCTCCATGCGGGCCAGCCGAGCCCGGCGCTCCGGAAGACGAACAAATTGTTCATGTTTTTGAAGAATAATTAAAAAGGGTTCAAAATTAGGTTTACGGTGTTGGCTAAAAAAAAGGAACGTAGGAATTTTAAGAATACGGCTTAACGACCAATGGGTTAACAATGGTCGGATGGGAGGTTTTGCTAGCTCAAGGGTTTCATCACGTACGTAGTCGCTTAAGCGAAGGTTAACGAAATAGATAGCAACAGCTACTGCCTCTTTACCTGACTGGCGGGGTTGCACTCAATAGTCAATCAATTCGTTTTTCTGATGTTGCCACCGGCAAACGTCTTACTTTTACTGTGAAAAGCTTCTAGCCATGTAAGTGTTGTTTTTTTCTTTCTTTTGCTCTTTTGGTCAATTTCTTCATCTGTTTTATATATTTAGGGTTAATCATTCATGATTTTGTAGAATATGTAGGGTTAATCATTCATGATTTTCATCCCCTGTTTGGTTGACAAACTTGAGAGCTCTTAGATCCATTTTCTTCTGAAAATAAGTGACATCTGCCGGCATTATCAAATTAAAACTTTTCTCTAAGGACTGTGTTTCTGTTTATGTGGCTTTTCTTATATTTCGTATAAATTGGTAATCTTAAAATGAGATTACAACTTAGATTTTTGGATCAAGCTACTTTTTTTGCTTTGGTTGATACATTATAATTTACTTAGTTATGCAACACTGTATGAAGAATAGGTTCGTGTGCTGGTAGAAATTGAGGTGGAGATTGTAAGATTCTGAATTTTGTGGATGAGGGCTTTGCATGGGTTGGAATGGGTATGCTTCTTGCTGTATGTGTTCTTATAATTTCCACATTGATGTGTACTTGTAGTGGGACCAATGAAGGAGACGTCGTGATTAGAGATACATCAAAGATGCAAGTCCAGATGAACGTGAAGAAGGCACACCTGGGCCTGGTAACTGCATTGACTTTCTCACACGACTCAAGGTTAGGAACCATTGCCTAGTACCCTACTTAAAACATCTGGATTTAGGAGTATTGAATTGACATTGAAGTTATGGCTCTATGTCCAGGGCTTTGTGTTCTGCTTCCATGGATTCAAGTGTCAGAGTGACACTGGTTCAAGAAAGAAGTGCTAATGGTTTGTCCTTACTCTTGTTTGAAACATATTTACATGTCTATTCAATTTCAATGTGATAATCCATTTTCCTCATGATCGAATTGCACAACTAACAATCATATAAACTATGTAAAGGTAAAGGCTAGCTGTAGGATCAGGATGTCAAATGGCCGTATTAGAAGATGGTTAGAAGGGAACATATGATACTTACTTATTTCGTTTGTAAAGAACCAGAAGCTGTGTTCTTTTCATTGCTAATAAAACTAGAGAAAGAGAAGCCCTAACAAAACAGGACGGTGGTAACTAACCCTCATAGCTAAGCTAAGCAGATGTTAGTTGACTTAATTCTGGCCATGCTATGCTAGAGAATGTTGACAAATAATCAATAATGCTAATCTTTGAAGTTTTGCATACACTTTTAAGAAGATGGAAGACATAATCTGAAAATGCATTACCATCCAGCCCCTAGACCTTAAGCACTCACTCTTAGTCAACGTTGCTGTTTCAAGAAATAGGCCTTTTGGCAAACAATGCAAGCCACTGGACTACTATTTGCATAAAGGTTGTCCTGTTCTGCTTTCTCCCTGGTAGCAACCAAATAGACGATATATTAATTGTTGGTTTCTTTTTATTCTCAGAAGGGAACAGTGAATCACTTTAATTGCCTAGGAAAATTTCCCTCATTAGCAGTTGTACTAAAATGTCTTTATTTTGGTGGATGCAGGTTTCAACTATGGGATCATCTTTTTCATGATACTACTAGTTGCAATTGTCGTTGCTTTCTTGATGAGACAAGGAATGATTCCTGGATTCTTAACTAGGTTTGACTAAAGTTTGCGGATGAGATATATTGGAGCCTCTTTCAAGTATAACCATGTCTAAAATTTGTCTTAGACACAGCTCAATAATGTATTTGTATTATTTTATACCAGAAGTGATTGTGTTGACAACTGAAATTTTAAGTGACAGAAGAAAAACATGTTAGATATTGTTTTACTAGTGCCTCGAACATCAAAATTTCATAATTGTTGGAGTCGAGTGTATAATGCCGTATTTTTGACTTGTTTTAGATACTAGTGCTGTGAGGATCGGAAAGAAAGTACTACGTAGTTGGTTTCTTCCAATAACTAACACCTAGCATGGAAACCCAAGATTGAGTGAAATAAATTAATAAATACCTCCTAAGAGGGCTTCCTACCTTGTTAGTTAGTTATGGGTTAAACTAGAGTGCCGCTTCTCCCCT ATGTTGTTCCATAATCTCCCCTTTCTCATTTTCAAACACCACAACATCAGTGTAGATGGAAAGTATCTGGTCTCTTTAGGAAGTGGTGGTCCTTGCAAGGTTTGGGATGTAACTTCATCAAAAGCTGTAGCTACTTTACCCAAGGAGAATGATGAGAATTTCAGGTTTTGCAGATTTTCTCAAAGTAGTGAAAGGGACCAGGTTCTGTACACAATTGCTATGCGAGATAAAGGTGGGAGTATAATATCGTGGAACACCAGATCCTGGAAAAGAATAGCTTCAAAGCATATCGGCCGGGATGCAGTTACTGCATTTAATGTCTCAGTTGATGGAAAGCTTCTAGCCATTGGGACCAATGAAGGAGACGTCGTGATTAGAGATACATCAAAGATGCAAGTCCAGATGAACGTGAAGAAGGCACACCTGGGCCTGGTAACTGCATTGACTTTCTCACACGACTCAAGGGCTTTGTGTTCTGCTTCCATGGATTCAAGTGTCAGAGTGACACTGGTTCAAGAAAGAAGTGCTAATGGTTTCAACTATGGGATCATCTTTTTCATGATACTACTAGTTGCAATTGTCGTTGCTTTCTTGATGAGACAAGGAATGATTCCTGGATTCTTAACTAGGTTTGACTAAAGTTTGCGGATGAGATATATTGGAGCCTCTTTCAAGTATAACCATGTCTAAAATTTGTCTTAGACACAGCTCAATAATGTATTTGTATTATTTTATACCAGAAGTGATTGTGTTGACAACTGAAATTTTAAGTGACAGAAGAAAAACATGTTAGATATTGTTTTACTAGTGCCTCGAACATCAAAATTTCATAATTGTTGGAGTCGAGTGTATAATGCCGTATTTTTGACTTGTTTTAGATACTAGTGCTGTGAGGATCGGAAAGAAAGTACTACGTAGTTGGTTTCTTCCAATAACTAACACCTAGCATGGAAACCCAAGATTGAGTGAAATAAATTAATAAATACCTCCTAAGAGGGCTTCCTACCTTGTTAGTTAGTTATGGGTTAAACTAGAGTGCCGCTTCTCCCCT ATGTTGTTCCATAATCTCCCCTTTCTCATTTTCAAACACCACAACATCAGTGTAGATGGAAAGTATCTGGTCTCTTTAGGAAGTGGTGGTCCTTGCAAGGTTTGGGATGTAACTTCATCAAAAGCTGTAGCTACTTTACCCAAGGAGAATGATGAGAATTTCAGGTTTTGCAGATTTTCTCAAAGTAGTGAAAGGGACCAGGTTCTGTACACAATTGCTATGCGAGATAAAGGTGGGAGTATAATATCGTGGAACACCAGATCCTGGAAAAGAATAGCTTCAAAGCATATCGGCCGGGATGCAGTTACTGCATTTAATGTCTCAGTTGATGGAAAGCTTCTAGCCATTGGGACCAATGAAGGAGACGTCGTGATTAGAGATACATCAAAGATGCAAGTCCAGATGAACGTGAAGAAGGCACACCTGGGCCTGGTAACTGCATTGACTTTCTCACACGACTCAAGGGCTTTGTGTTCTGCTTCCATGGATTCAAGTGTCAGAGTGACACTGGTTCAAGAAAGAAGTGCTAATGGTTTCAACTATGGGATCATCTTTTTCATGATACTACTAGTTGCAATTGTCGTTGCTTTCTTGATGAGACAAGGAATGATTCCTGGATTCTTAACTAGGTTTGACTAA MLFHNLPFLIFKHHNISVDGKYLVSLGSGGPCKVWDVTSSKAVATLPKENDENFRFCRFSQSSERDQVLYTIAMRDKGGSIISWNTRSWKRIASKHIGRDAVTAFNVSVDGKLLAIGTNEGDVVIRDTSKMQVQMNVKKAHLGLVTALTFSHDSRALCSASMDSSVRVTLVQERSANGFNYGIIFFMILLVAIVVAFLMRQGMIPGFLTRFD Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo03357.1 vs. NCBI nr
Match: gi|902152836|gb|KNA05636.1| (hypothetical protein SOVF_188520 [Spinacia oleracea]) HSP 1 Score: 386.0 bits (990), Expect = 4.400e-104 Identity = 196/201 (97.51%), Postives = 197/201 (98.01%), Query Frame = 1
BLAST of Spo03357.1 vs. NCBI nr
Match: gi|902169158|gb|KNA07624.1| (hypothetical protein SOVF_170150 [Spinacia oleracea]) HSP 1 Score: 368.2 bits (944), Expect = 9.400e-99 Identity = 187/197 (94.92%), Postives = 191/197 (96.95%), Query Frame = 1
BLAST of Spo03357.1 vs. NCBI nr
Match: gi|731360672|ref|XP_010691946.1| (PREDICTED: SEC12-like protein 2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 279.3 bits (713), Expect = 5.800e-72 Identity = 140/186 (75.27%), Postives = 162/186 (87.10%), Query Frame = 1
BLAST of Spo03357.1 vs. NCBI nr
Match: gi|297737697|emb|CBI26898.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 231.5 bits (589), Expect = 1.400e-57 Identity = 112/194 (57.73%), Postives = 153/194 (78.87%), Query Frame = 1
BLAST of Spo03357.1 vs. NCBI nr
Match: gi|359472868|ref|XP_002284414.2| (PREDICTED: SEC12-like protein 2 [Vitis vinifera]) HSP 1 Score: 231.5 bits (589), Expect = 1.400e-57 Identity = 112/194 (57.73%), Postives = 153/194 (78.87%), Query Frame = 1
BLAST of Spo03357.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QGF1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_188520 PE=4 SV=1) HSP 1 Score: 386.0 bits (990), Expect = 3.000e-104 Identity = 196/201 (97.51%), Postives = 197/201 (98.01%), Query Frame = 1
BLAST of Spo03357.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QK66_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_170150 PE=4 SV=1) HSP 1 Score: 368.2 bits (944), Expect = 6.600e-99 Identity = 187/197 (94.92%), Postives = 191/197 (96.95%), Query Frame = 1
BLAST of Spo03357.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BEP7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g016910 PE=4 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 4.000e-72 Identity = 140/186 (75.27%), Postives = 162/186 (87.10%), Query Frame = 1
BLAST of Spo03357.1 vs. UniProtKB/TrEMBL
Match: F6HFH8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g04970 PE=4 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 9.600e-58 Identity = 112/194 (57.73%), Postives = 153/194 (78.87%), Query Frame = 1
BLAST of Spo03357.1 vs. UniProtKB/TrEMBL
Match: B9SJ58_RICCO (Prolactin regulatory element-binding protein, putative OS=Ricinus communis GN=RCOM_0843720 PE=4 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 3.100e-56 Identity = 112/189 (59.26%), Postives = 150/189 (79.37%), Query Frame = 1
BLAST of Spo03357.1 vs. ExPASy Swiss-Prot
Match: STLP2_ARATH (SEC12-like protein 2 OS=Arabidopsis thaliana GN=STL2P PE=1 SV=4) HSP 1 Score: 179.1 bits (453), Expect = 5.100e-44 Identity = 98/191 (51.31%), Postives = 137/191 (71.73%), Query Frame = 1
BLAST of Spo03357.1 vs. ExPASy Swiss-Prot
Match: PHF1_ARATH (SEC12-like protein 1 OS=Arabidopsis thaliana GN=PHF1 PE=1 SV=2) HSP 1 Score: 84.3 bits (207), Expect = 1.700e-15 Identity = 45/186 (24.19%), Postives = 91/186 (48.92%), Query Frame = 1
BLAST of Spo03357.1 vs. TAIR (Arabidopsis)
Match: AT2G01470.1 (SEC12P-like 2 protein) HSP 1 Score: 179.1 bits (453), Expect = 2.900e-45 Identity = 98/191 (51.31%), Postives = 137/191 (71.73%), Query Frame = 1
BLAST of Spo03357.1 vs. TAIR (Arabidopsis)
Match: AT5G50550.1 (Transducin/WD40 repeat-like superfamily protein) HSP 1 Score: 176.4 bits (446), Expect = 1.900e-44 Identity = 98/190 (51.58%), Postives = 131/190 (68.95%), Query Frame = 1
BLAST of Spo03357.1 vs. TAIR (Arabidopsis)
Match: AT5G50650.1 (Transducin/WD40 repeat-like superfamily protein) HSP 1 Score: 176.4 bits (446), Expect = 1.900e-44 Identity = 98/190 (51.58%), Postives = 131/190 (68.95%), Query Frame = 1
BLAST of Spo03357.1 vs. TAIR (Arabidopsis)
Match: AT3G52190.1 (phosphate transporter traffic facilitator1) HSP 1 Score: 84.3 bits (207), Expect = 9.600e-17 Identity = 45/186 (24.19%), Postives = 91/186 (48.92%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo03357.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo03357.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo03357.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 2
BLAST of Spo03357.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 4
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
|