Spo03362 (gene) | SpinachBase

Overview


Name	Spo03362
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Unknown protein
Location	SpoScf_01141 : 170380 .. 172949 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCAATAATAGAACAAAAGGTATGAACAAATAAAACAAAAAGTATGAACAATTTCATTATGAACATTAAGAAGATGATTATTATGAACAAACAAATAAACAAGCAAGGACAAACAATTCAACAAAAAAGAACAACCAATATAAAAAAGAACATACCAGAAGAAAGAACAAATAATACAACAATTATGAACAATTTTATGATGAATTTAAAAAACCAACATGAAAGAACACACAAAGAAAGAACAAACAATACAAGCAATTGTAAAAACATAAAAGAAAAATGAAGACCTTAGTTTCATTATGAACATTTATTATGAACAAACAGATAAACAAGAAAGAACAAATAAATAAGAAAGAACAAATAATTCAACAAAAAAGAACAAACAATATAAAAAAACATAAAATTCCAGAAGAAAGAACAAACAATTCAACAAATTATGAACAATTTTATGATGAATTTAAAAAAAACATTGAAGAACAAACAGTACAACAAGAAAGAACAAATAATATAAGAGCGTCAAACAATACAGGCGCATCGTTTTTTGGAGGTACAACAGTTAGGGGTTAACCTATCATAACTAATGGAATTATAGAAATAGAAATAATATTGTAGAACCAATGCATCTAATAGTAACATTACGAACTACTAGTAGTAATCTACCAAATTCATTTCAAAGAGCTTAATGTCTCAACTAATAACTAATTGCCAAAATAAAAAATAAAAAATAAAATTGTCTCAACTACCAAGGTAAAAGATTGTCCCAAAGTACAAGAACAACCCCCCACATTAAGGTCGGTGTAATATTTTCTGTTGATCAAAACTTCCTAACCAATAATTCAAACCTTAACTAATGTGGAGTATATAGGTTTAATCTTCATTCGAACTTGCTATTCAGAAAACTATATAAAAGTGGACAAATACCAAAAGAGTACAACCGAGTGTACTTGTACAGTTATACTCTTATACTCCGTAATGTGCAAGTGCCATACTATAAAGGTTATTATTTGTCCATAGCTTATGATTTTTGAGCAAATGTGCAAAACAAATCCTTGGTCCATTGTATGGTGAGCATCTCTCATTTAAATTTGCAATTGGAAGACATAATTGTTCTTTGAGTTACTTATATACAAAGTGCATAGATACCAAAAAGTTACATTACGCCACAACTTAAGATGGATGCTAAACCTTTCATCAGTCCTAACCATTTTCCGTAGTACCTATGTAATACGAATTTTTTTTTTTTTTTGGATGAAGACAAGTGACATGTAAGTTCATGATCATGAAAGCTAAATTTTTTACATGGAAAGCTATAAGAGAATGACAACTCAATAAGTGTTATCGACTTTCTTAACCATCTACTTCCTCCGTCCCTTTTTATTTTTTACATATTTCGTTTTGTTGTCCCGTTATAATCTTTATATTTGATATATTTCCTTTTATATTATATCATAAATACCCTTAATATTCTATCAAAATTATGTCAAATGATTATTTTAATTAATTAAATTCATCCCAGTGAGTTATTAAAATTTCTCACAATTCCCCAATGTCCGAGTTTTAATCGTTAAATTGCGGCATTATACAAAACATAAATAAGAAAAAGAGTTGGAGGGAGTAATATTTTTGAACAAATCTTAACTATCTTAATTGTACATTCAAAATTCAGTCACATAGTAAAAGAGAGAATAAATAAGACCATTGCTACATGAACTTAAGCAAATAAGTTAACTAACTACACAGTACGGAGTATAAAGAACGCTTTACCCAATTCTGCCGGTAATACGAAATGATGCCAAACTTATATTACTTCGAAATCTTAGATTATGTTTCATTTGACTTATGTTGATTATATTTATCCGAACTTATTTTATTTTGTGAAGTATTCTGGCTTGATAAACTTTTTGTGTATAAAAGTGTCGGAATGGATTAGTCATAGTTGTCACATGTTTTTTTCCTTTTATTTTTTAAATAAACAAAGATTACCTCATATGCTCTCCACGTGTGCACGTCTTATTTGCCACATGTATTTTCATATCTCCTTTTTTCTCTCTCTTCTTGAATATCCGTATTTTCTTTAAAATCAAATTAATATTTTACCTCTCACTGTTTTTCAAAATAATAAAATAAAAAACACTGACCGGAACAGATACCTGCGAATATCTTCACCGGAATTTCCATTTTCTCTTTTAGAGAGAGAAACTGAAAAACTCTGCAATTCAATCACCCAAAAAATCAAAATTAGGGTTTACTTTACCTCCATTTAAGCTCAAAAAAGCTCCCTTTTTTTCCCTTCAAAGATTCAAACTTTGCTTTTATCCCACAATAGCTCACTAAAAATTCAACCCCTTCTTTTTTTTGTTGCTTCAAGTGTAAGTTTCTCTGTTCTTTTTGCTACCCTTTTTCCTCCCCACAAATTTTCTTCCATTTTCGAATACGAAGAAGCTTCAAGTTCAAGCTCAATCCCGTCACACACAAAAAAAGAAGAAGTTAAAGCTCAATCAAGAATTTTCAAGAATAAAAACAAAAACAAAGGGTTCTTTGTTTTTTTAGGTAATCTCCCAAAATAA

mRNA sequence

ATGCTCAATAATAGAACAAAAGCTCAAAAAAGCTCCCTTTTTTTCCCTTCAAAGATTCAAACTTTGCTTTTATCCCACAATAGCTCACTAAAAATTCAACCCCTTCTTTTTTTTGTTGCTTCAAGTGTAAGTTTCTCTGTTCTTTTTGCTACCCTTTTTCCTCCCCACAAATTTTCTTCCATTTTCGAATACGAAGAAGCTTCAAGTTCAAGCTCAATCCCGTCACACACAAAAAAAGAAGAAGTTAAAGCTCAATCAAGAATTTTCAAGAATAAAAACAAAAACAAAGGGTTCTTTGTTTTTTTAGGTAATCTCCCAAAATAA

Coding sequence (CDS)

ATGCTCAATAATAGAACAAAAGCTCAAAAAAGCTCCCTTTTTTTCCCTTCAAAGATTCAAACTTTGCTTTTATCCCACAATAGCTCACTAAAAATTCAACCCCTTCTTTTTTTTGTTGCTTCAAGTGTAAGTTTCTCTGTTCTTTTTGCTACCCTTTTTCCTCCCCACAAATTTTCTTCCATTTTCGAATACGAAGAAGCTTCAAGTTCAAGCTCAATCCCGTCACACACAAAAAAAGAAGAAGTTAAAGCTCAATCAAGAATTTTCAAGAATAAAAACAAAAACAAAGGGTTCTTTGTTTTTTTAGGTAATCTCCCAAAATAA

Protein sequence

MLNNRTKAQKSSLFFPSKIQTLLLSHNSSLKIQPLLFFVASSVSFSVLFATLFPPHKFSSIFEYEEASSSSSIPSHTKKEEVKAQSRIFKNKNKNKGFFVFLGNLPK

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo03362.1	Spo03362.1	mRNA

Homology

The following BLAST results are available for this feature:

BLAST of Spo03362.1 vs. NCBI nr
BLAST of Spo03362.1 vs. UniProtKB/TrEMBL
BLAST of Spo03362.1 vs. ExPASy Swiss-Prot
BLAST of Spo03362.1 vs. TAIR (Arabidopsis)

BLAST of Spo03362.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

BLAST of Spo03362.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

BLAST of Spo03362.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

BLAST of Spo03362.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006855	drug transmembrane transport
biological_process	GO:0009651	response to salt stress
biological_process	GO:0006457	protein folding
biological_process	GO:0019761	glucosinolate biosynthetic process
biological_process	GO:0030007	cellular potassium ion homeostasis
biological_process	GO:0000911	cytokinesis by cell plate formation
biological_process	GO:0006888	ER to Golgi vesicle-mediated transport
biological_process	GO:0008152	metabolic process
biological_process	GO:0000226	microtubule cytoskeleton organization
biological_process	GO:0007165	signal transduction
biological_process	GO:0015979	photosynthesis
biological_process	GO:0009553	embryo sac development
biological_process	GO:0050983	obsolete deoxyhypusine biosynthetic process from spermidine
biological_process	GO:0008612	peptidyl-lysine modification to peptidyl-hypusine
biological_process	GO:0015991	ATP hydrolysis coupled proton transport
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0006662	glycerol ether metabolic process
biological_process	GO:0006979	response to oxidative stress
biological_process	GO:0009414	response to water deprivation
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0043090	amino acid import
biological_process	GO:0010363	regulation of plant-type hypersensitive response
biological_process	GO:0009231	riboflavin biosynthetic process
biological_process	GO:0000023	maltose metabolic process
biological_process	GO:0019252	starch biosynthetic process
biological_process	GO:0042908	xenobiotic transport
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0016556	mRNA modification
biological_process	GO:0009963	positive regulation of flavonoid biosynthetic process
biological_process	GO:0006612	protein targeting to membrane
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0033179	proton-transporting V-type ATPase, V0 domain
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0031969	chloroplast membrane
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0000325	plant-type vacuole
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0009349	riboflavin synthase complex
cellular_component	GO:0005774	vacuolar membrane
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0015035	protein disulfide oxidoreductase activity
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0015078	proton transmembrane transporter activity
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008559	xenobiotic transmembrane transporting ATPase activity
molecular_function	GO:0008281	sulfonylurea receptor activity
molecular_function	GO:0004746	riboflavin synthase activity
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003756	protein disulfide isomerase activity
molecular_function	GO:0034038	deoxyhypusine synthase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo24675	0.80	Barchart \| Table
Spo18080	0.80	Barchart \| Table
Spo19938	0.79	Barchart \| Table
Spo21215	0.79	Barchart \| Table
Spo02918	0.78	Barchart \| Table
Spo09554	0.77	Barchart \| Table
Spo26610	0.76	Barchart \| Table
Spo10284	0.76	Barchart \| Table
Spo15461	0.76	Barchart \| Table
Spo24325	0.76	Barchart \| Table
Spo25985	0.76	Barchart \| Table
Spo08407	0.75	Barchart \| Table
Spo23332	0.75	Barchart \| Table
Spo10835	0.75	Barchart \| Table
Spo01925	0.75	Barchart \| Table
Spo26697	0.75	Barchart \| Table
Spo00677	0.75	Barchart \| Table
Spo01054	0.74	Barchart \| Table
Spo24425	0.74	Barchart \| Table
Spo02890	0.74	Barchart \| Table
Spo15317	0.74	Barchart \| Table
Spo24046	0.74	Barchart \| Table
Spo18578	0.74	Barchart \| Table
Spo14914	0.74	Barchart \| Table
Spo05915	0.73	Barchart \| Table
Spo16188	0.73	Barchart \| Table
Spo19018	0.73	Barchart \| Table
Spo25987	0.73	Barchart \| Table
Spo02696	0.73	Barchart \| Table
Spo05307	0.73	Barchart \| Table
Spo06953	0.73	Barchart \| Table
Spo08935	0.73	Barchart \| Table
Spo10898	0.73	Barchart \| Table
Spo21144	0.73	Barchart \| Table
Spo19431	0.72	Barchart \| Table
Spo01057	0.72	Barchart \| Table
Spo17860	0.72	Barchart \| Table
Spo13788	0.72	Barchart \| Table
Spo25196	0.72	Barchart \| Table
Spo08478	0.72	Barchart \| Table
Spo13981	0.71	Barchart \| Table
Spo24913	0.71	Barchart \| Table
Spo23327	0.71	Barchart \| Table
Spo01628	0.71	Barchart \| Table
Spo25107	0.71	Barchart \| Table
Spo16240	0.71	Barchart \| Table
Spo16996	0.71	Barchart \| Table
Spo22811	0.71	Barchart \| Table
Spo15843	0.70	Barchart \| Table
Spo08351	0.70	Barchart \| Table
Spo04200	0.70	Barchart \| Table
Spo05653	0.70	Barchart \| Table
Spo00256	0.70	Barchart \| Table
Spo27364	0.70	Barchart \| Table
Spo01217	0.70	Barchart \| Table
Spo25008	0.70	Barchart \| Table
Spo11524	0.70	Barchart \| Table
Spo11688	0.70	Barchart \| Table
Spo23549	0.70	Barchart \| Table
Spo03572	0.69	Barchart \| Table
Spo26430	0.69	Barchart \| Table
Spo09387	0.69	Barchart \| Table
Spo23853	0.69	Barchart \| Table
Spo06164	0.69	Barchart \| Table
Spo11558	0.69	Barchart \| Table
Spo05402	0.69	Barchart \| Table
Spo03310	0.69	Barchart \| Table
Spo23382	0.69	Barchart \| Table
Spo02665	0.69	Barchart \| Table
Spo12954	0.69	Barchart \| Table
Spo09335	0.69	Barchart \| Table
Spo09769	0.69	Barchart \| Table
Spo09798	0.69	Barchart \| Table
Spo22583	0.69	Barchart \| Table
Spo10235	0.69	Barchart \| Table
Spo19836	0.69	Barchart \| Table
Spo03199	0.69	Barchart \| Table
Spo04123	0.68	Barchart \| Table
Spo24630	0.68	Barchart \| Table
Spo18063	0.68	Barchart \| Table
Spo01252	0.68	Barchart \| Table
Spo20106	0.68	Barchart \| Table
Spo17726	0.68	Barchart \| Table
Spo23076	0.68	Barchart \| Table
Spo13507	0.68	Barchart \| Table
Spo22004	0.68	Barchart \| Table
Spo16643	0.68	Barchart \| Table
Spo21155	0.68	Barchart \| Table
Spo15215	0.68	Barchart \| Table
Spo14225	0.67	Barchart \| Table
Spo01983	0.67	Barchart \| Table
Spo02573	0.67	Barchart \| Table
Spo02730	0.67	Barchart \| Table
Spo02979	0.67	Barchart \| Table
Spo03638	0.67	Barchart \| Table
Spo07941	0.67	Barchart \| Table
Spo08114	0.67	Barchart \| Table
Spo09434	0.67	Barchart \| Table
Spo10491	0.67	Barchart \| Table
Spo10525	0.67	Barchart \| Table
Spo12843	0.67	Barchart \| Table
Spo15222	0.67	Barchart \| Table
Spo17947	0.67	Barchart \| Table
Spo20050	0.67	Barchart \| Table
Spo20837	0.67	Barchart \| Table
Spo23318	0.67	Barchart \| Table
Spo23712	0.67	Barchart \| Table
Spo23745	0.67	Barchart \| Table
Spo06453	0.66	Barchart \| Table
Spo15881	0.66	Barchart \| Table
Spo01068	0.66	Barchart \| Table
Spo15524	0.66	Barchart \| Table
Spo20648	0.66	Barchart \| Table
Spo09381	0.66	Barchart \| Table
Spo24331	0.66	Barchart \| Table
Spo08713	0.66	Barchart \| Table
Spo08654	0.66	Barchart \| Table
Spo08097	0.66	Barchart \| Table
Spo24736	0.66	Barchart \| Table
Spo07149	0.66	Barchart \| Table
Spo02106	0.66	Barchart \| Table
Spo25988	0.66	Barchart \| Table
Spo17320	0.66	Barchart \| Table
Spo16079	0.66	Barchart \| Table
Spo19457	0.66	Barchart \| Table
Spo00526	0.66	Barchart \| Table
Spo15365	0.66	Barchart \| Table
Spo15211	0.66	Barchart \| Table
Spo14938	0.66	Barchart \| Table
Spo21254	0.66	Barchart \| Table
Spo21383	0.66	Barchart \| Table
Spo14630	0.66	Barchart \| Table
Spo22451	0.66	Barchart \| Table
Spo13905	0.66	Barchart \| Table
Spo23035	0.66	Barchart \| Table
Spo23124	0.66	Barchart \| Table
Spo27081	0.66	Barchart \| Table
Spo13171	0.66	Barchart \| Table
Spo13161	0.66	Barchart \| Table
Spo12354	0.66	Barchart \| Table
Spo11960	0.66	Barchart \| Table
Spo00214	0.66	Barchart \| Table
Spo28267	0.66	Barchart \| Table
Spo20651	0.65	Barchart \| Table
Spo13393	0.65	Barchart \| Table
Spo10092	0.65	Barchart \| Table
Spo01135	0.65	Barchart \| Table
Spo15995	0.65	Barchart \| Table
Spo03896	0.65	Barchart \| Table
Spo02932	0.65	Barchart \| Table
Spo16960	0.65	Barchart \| Table
Spo17024	0.65	Barchart \| Table
Spo00205	0.65	Barchart \| Table
Spo07980	0.65	Barchart \| Table
Spo11417	0.65	Barchart \| Table