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Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTGGGATATTTAGTGAATTTCGTAAAAACGTTGGGAAATTTTGATATGACCCGGCCCCATTAGAGTCAAGTTGAACCCGAGCCACACACCCGATTGGACAACTCTCCCCGATTCAAAAATGCTTCAAGCATTCAACGAGAACTATCAGTACTCTTCAAACGGTAGAGAAATTTTGTGAAATTCTCACTCCATCAAAGAAATGGCGATGCAAGTTGAAGAAGGTAAATCAGGATCAGAGTTCCCTTACTGGAAACCTGTTCACCGGAAGTTTGCTCCTGATTCTCCCTTTTTCTCTTCCGGCGATGTTGAGCGACAACTTCTCGACAAACAGGTCTTAATTTTTTTTACTCGTTGTGAACATTTCTGTACTTTATGAGAATGATTGCTTTGATTAAACTCATTAGTTACTGTAATGGAAATTATTTTGTGTTTATGATCATCTATTGTGTTATAATTAGGTTTAATTTTAAAAAGGGTTAATTGAGATTTTTAGGGTTTTGATTGGAATATGCAATGCATCATTTTTTCTTGAAATTAAGCTCACTTTTAGGTGTAAACTGGTTGTTCTCGCTAGCTTATATGAGTGGGTATACCATTTTTTATAAGGTGGAGCTTAATTTTTCTATCTGTACCAAAATATGAAGAGTAGTAAATTTAGAGAAATTTCATAATTCTAGTCCATGAACTGGTTCCGTGGGACTGCGAATGCTGCCTGAGTCCCTGATTGTTATTGCTCAACCCTGTGAACTGATTGAACTCTGTAAATTAGATTTAACAAGTACCATGCACAAACCAATTTGCCAATGTATATCTTATATAATTGGCACCTTGTCCAGACCCCTCGTAATTAAGAATATGATACTCGGTATTTTGTAACTTCTAAAATCAGTCAAGAAATGGTTTCTTCATAACATAAATACATAATGGCATAAGTTTTAGCTCTTCATGGTCCATTGAATAAAATCTAGATGTCCGGCTTAGCTTCTCTTGGGGAAAGTTCGCCTTTTATTCGATATGATACTGCAGGATTAACTAGTTAAATTTACGGTTTCCTTTCTATTATGGATAAAGCTGTCATCGTAATACTGACCCTGTATTGCTGTGTTTTGAACAAAGTGGCTTGTTTTATTTTTGACTTGATTCATGTCCAGGTTGCGTTGGTTTTGACTGAAGATGAAATGCAACAACTTCTTGACATGGAAGATCATGAAAGGTATGAAGTAATACAATACAATTGTCTGTTTCAGATGTCCCGTATTTCCAATTTAAGAATGTCCCTTGATGCTAAATTCAAATCCATTCCACCCATGGGGTTATCAGTTCAAATGCTAGAGAAGGTACTTACCTAATCTATGTAGTTATTGTCTCCCTTTTCCAGCTTGCTGGATAAGCGGAAAAATATGATGACTACTTAACTAGTGATAAGGAAGTCTCGTTTCCACGGCTTCATTTGAGTAGTTCATGTTTCTAGTACCATTAGGTTGTTCTCACTTCTTGTTTTGCGGACTAAAAACTGGGGTATGAGTTTAAATTATAGAGCGCATTACATTTTCTTGTCGATTTTATTGAGGAATTGCTTGCACTGGCTAGTTACTAGAGTTTTCATCTTTTCCTGCTTCCAAAGACCAAGTTCGCAACTTTTTCTCTAATTTCTATAATCTTCTTTTGTTAGATATTACTCCCTCCATCTATTTTATCGTCGCAATTTCTTTTTTCGTCTGTCAATCTAATTGTCATACTTCCTTTATGGCATGAACCCACTGGTATTTGATTAACTCTCTCCTCCTACTACCAAAAGTTATGGCCTCAAATCCCCCCCACATTCAATTAAACAAATACTTCCACTATCTCTCACCATACCCATTTTCTATTAAACTATAATAAATAAGCTTATAATAACGTATCGCATTGAACTTCGTGAGAAGTCTATTGCGACAATTCAGGAATACTTCATTCTGCTTGTTTTTACTTGATTGAGATCAGTATACCTCATGACATAACGTGATTGCAGGGAGATTTTCTGTCCAATTGTGGGTTGTGGTGCACGGTTAAATTCATTAGAAGGCTTTGAGGATCACTACCATTCATGCCATACTGCATCCTGTTCAGTATGCCATAAATCATATCCAACACAGCGCTTGCTTAGCATACATTTGTCAGAAGTGCATGACTCTTATTTTAAGGCCAAAGTTTCGAAGGGTTTCTCCATGGTAAGTACTAACTCTGCTCACATCCTTTTATCTTTACTCAACATCACACGTTTTCCCTCCTCAACTATCTAAATATTGTAGCCTTCTTGTTGATGATACACAATAATACTTTGAGTTCTGAAGGCATCCTTTATTTATGCTGGAAAACAAAATAAAACTATAGCAATGGATGCCAACGGTGACTTTCATATAGTAATTTAATACAGGACAAAGTTTTTTCTTCCAAGCATGCTAGTAGACCATAGGTAGGGATTGATGGAATGATGGACAGTAGAAAGTTGAACTCACGCTAGTTTCCAGTGGTGTCATTTCAGCTGCCAAACCAAACGTCAAAGAAAGAGAAATGGTTGTTTGTCAATTCACATAGCCTAGAAGTAATGATGAACCGGTGGTATTTGTCAGTGCACATTTTTTGAAAGACAAATGCTGAAAAATTAAGATTGATTATGTTCATCTTCAGTACGAATGCTTGGTGGAAACTTGCGGGTTGAAATTCAAGAGTTATAAAGCCCGACATCAACATCTTGTGGACAAGCACAAATTTCCTATTACATATGAGTTCTATAAGAAAGCACACTTATCCAAGAAACAGAGGCAGAAATACGGGCGTAAACCAGCACTTTGCAAGGAGGAAACTTCAAATGCAATGCCATTAGACAATGAGGCCGATGACAGCATGGAAGATCTTACTTCTGCTATCTCCCAGTTAAGCACGTCTGACTCGGTGCCTTCGTCCATTAGCTTTGGCCATCGCCACAGTCGTGGCTTGGCCTTTGTTCCTCGGTCTGTTCAGCGTGAGAGAAGACCGGGCTATTCACCATCCACAATGAATTGATAGCAACATATATATACTCTGTAGTTTGATGTTTTGAATTTTTTTCTTGAAAATACTAGTGCTATCATTTTTCTTTTGTTTCCGCGTATCTGGTTTATTTGTTTTATATTTTTAATTTTGGGGGATGTAGTTTGTTCAGCATTTTGTATGTTCAATTACCTATCCAAAAATTAGGTTAAAACTCGTTGTTGGGATATTTAGTGAATTTCGTAAAAACGTTGGGAAATTTTGATATGACCCGGCCCCATTAGAGTCAAGTTGAACCCGAGCCACACACCCGATTGGACAACTCTCCCCGATTCAAAAATGCTTCAAGCATTCAACGAGAACTATCAGTACTCTTCAAACGGTAGAGAAATTTTGTGAAATTCTCACTCCATCAAAGAAATGGCGATGCAAGTTGAAGAAGGTAAATCAGGATCAGAGTTCCCTTACTGGAAACCTGTTCACCGGAAGTTTGCTCCTGATTCTCCCTTTTTCTCTTCCGGCGATGTTGAGCGACAACTTCTCGACAAACAGGTTGCGTTGGTTTTGACTGAAGATGAAATGCAACAACTTCTTGACATGGAAGATCATGAAAGGGAGATTTTCTGTCCAATTGTGGGTTGTGGTGCACGGTTAAATTCATTAGAAGGCTTTGAGGATCACTACCATTCATGCCATACTGCATCCTGTTCAGTATGCCATAAATCATATCCAACACAGCGCTTGCTTAGCATACATTTGTCAGAAGTGCATGACTCTTATTTTAAGGCCAAAGTTTCGAAGGGTTTCTCCATGTACGAATGCTTGGTGGAAACTTGCGGGTTGAAATTCAAGAGTTATAAAGCCCGACATCAACATCTTGTGGACAAGCACAAATTTCCTATTACATATGAGTTCTATAAGAAAGCACACTTATCCAAGAAACAGAGGCAGAAATACGGGCGTAAACCAGCACTTTGCAAGGAGGAAACTTCAAATGCAATGCCATTAGACAATGAGGCCGATGACAGCATGGAAGATCTTACTTCTGCTATCTCCCAGTTAAGCACGTCTGACTCGGTGCCTTCGTCCATTAGCTTTGGCCATCGCCACAGTCGTGGCTTGGCCTTTGTTCCTCGGTCTGTTCAGCGTGAGAGAAGACCGGGCTATTCACCATCCACAATGAATTGATAGCAACATATATATACTCTGTAGTTTGATGTTTTGAATTTTTTTCTTGAAAATACTAGTGCTATCATTTTTCTTTTGTTTCCGCGTATCTGGTTTATTTGTTTTATATTTTTAATTTTGGGGGATGTAGTTTGTTCAGCATTTTGTATGTTCAATTACCTATCCAAAAATTAGGTTAAAACTCGTT ATGGCGATGCAAGTTGAAGAAGGTAAATCAGGATCAGAGTTCCCTTACTGGAAACCTGTTCACCGGAAGTTTGCTCCTGATTCTCCCTTTTTCTCTTCCGGCGATGTTGAGCGACAACTTCTCGACAAACAGGTTGCGTTGGTTTTGACTGAAGATGAAATGCAACAACTTCTTGACATGGAAGATCATGAAAGGGAGATTTTCTGTCCAATTGTGGGTTGTGGTGCACGGTTAAATTCATTAGAAGGCTTTGAGGATCACTACCATTCATGCCATACTGCATCCTGTTCAGTATGCCATAAATCATATCCAACACAGCGCTTGCTTAGCATACATTTGTCAGAAGTGCATGACTCTTATTTTAAGGCCAAAGTTTCGAAGGGTTTCTCCATGTACGAATGCTTGGTGGAAACTTGCGGGTTGAAATTCAAGAGTTATAAAGCCCGACATCAACATCTTGTGGACAAGCACAAATTTCCTATTACATATGAGTTCTATAAGAAAGCACACTTATCCAAGAAACAGAGGCAGAAATACGGGCGTAAACCAGCACTTTGCAAGGAGGAAACTTCAAATGCAATGCCATTAGACAATGAGGCCGATGACAGCATGGAAGATCTTACTTCTGCTATCTCCCAGTTAAGCACGTCTGACTCGGTGCCTTCGTCCATTAGCTTTGGCCATCGCCACAGTCGTGGCTTGGCCTTTGTTCCTCGGTCTGTTCAGCGTGAGAGAAGACCGGGCTATTCACCATCCACAATGAATTGA MAMQVEEGKSGSEFPYWKPVHRKFAPDSPFFSSGDVERQLLDKQVALVLTEDEMQQLLDMEDHEREIFCPIVGCGARLNSLEGFEDHYHSCHTASCSVCHKSYPTQRLLSIHLSEVHDSYFKAKVSKGFSMYECLVETCGLKFKSYKARHQHLVDKHKFPITYEFYKKAHLSKKQRQKYGRKPALCKEETSNAMPLDNEADDSMEDLTSAISQLSTSDSVPSSISFGHRHSRGLAFVPRSVQRERRPGYSPSTMN Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo03381.1 vs. NCBI nr
Match: gi|902134646|gb|KNA04409.1| (hypothetical protein SOVF_200090 [Spinacia oleracea]) HSP 1 Score: 520.0 bits (1338), Expect = 2.300e-144 Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 1
BLAST of Spo03381.1 vs. NCBI nr
Match: gi|731337875|ref|XP_010680023.1| (PREDICTED: zinc finger protein 511 isoform X2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 378.3 bits (970), Expect = 1.100e-101 Identity = 185/248 (74.60%), Postives = 219/248 (88.31%), Query Frame = 1
BLAST of Spo03381.1 vs. NCBI nr
Match: gi|566152582|ref|XP_002300111.2| (hypothetical protein POPTR_0001s33690g [Populus trichocarpa]) HSP 1 Score: 317.4 bits (812), Expect = 2.300e-83 Identity = 163/256 (63.67%), Postives = 204/256 (79.69%), Query Frame = 1
BLAST of Spo03381.1 vs. NCBI nr
Match: gi|657974546|ref|XP_008379104.1| (PREDICTED: zinc finger protein 511 [Malus domestica]) HSP 1 Score: 315.1 bits (806), Expect = 1.100e-82 Identity = 158/247 (63.97%), Postives = 200/247 (80.97%), Query Frame = 1
BLAST of Spo03381.1 vs. NCBI nr
Match: gi|449442046|ref|XP_004138793.1| (PREDICTED: zinc finger protein 511 [Cucumis sativus]) HSP 1 Score: 313.9 bits (803), Expect = 2.500e-82 Identity = 160/240 (66.67%), Postives = 192/240 (80.00%), Query Frame = 1
BLAST of Spo03381.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QAW4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_200090 PE=4 SV=1) HSP 1 Score: 520.0 bits (1338), Expect = 1.600e-144 Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 1
BLAST of Spo03381.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C7L3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g131450 PE=4 SV=1) HSP 1 Score: 378.3 bits (970), Expect = 7.600e-102 Identity = 185/248 (74.60%), Postives = 219/248 (88.31%), Query Frame = 1
BLAST of Spo03381.1 vs. UniProtKB/TrEMBL
Match: B9GJU9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s33690g PE=4 SV=2) HSP 1 Score: 317.4 bits (812), Expect = 1.600e-83 Identity = 163/256 (63.67%), Postives = 204/256 (79.69%), Query Frame = 1
BLAST of Spo03381.1 vs. UniProtKB/TrEMBL
Match: A0A0A0LMY3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G406660 PE=4 SV=1) HSP 1 Score: 313.9 bits (803), Expect = 1.800e-82 Identity = 160/240 (66.67%), Postives = 192/240 (80.00%), Query Frame = 1
BLAST of Spo03381.1 vs. UniProtKB/TrEMBL
Match: W9SYV0_9ROSA (Zinc finger protein 511 OS=Morus notabilis GN=L484_010780 PE=4 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 5.100e-82 Identity = 158/248 (63.71%), Postives = 199/248 (80.24%), Query Frame = 1
BLAST of Spo03381.1 vs. ExPASy Swiss-Prot
Match: ZN511_DANRE (Zinc finger protein 511 OS=Danio rerio GN=znf511 PE=2 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 4.000e-27 Identity = 80/242 (33.06%), Postives = 120/242 (49.59%), Query Frame = 1
BLAST of Spo03381.1 vs. ExPASy Swiss-Prot
Match: ZN511_MOUSE (Zinc finger protein 511 OS=Mus musculus GN=Znf511 PE=2 SV=2) HSP 1 Score: 99.8 bits (247), Expect = 4.700e-20 Identity = 61/205 (29.76%), Postives = 102/205 (49.76%), Query Frame = 1
BLAST of Spo03381.1 vs. ExPASy Swiss-Prot
Match: ZN511_HUMAN (Zinc finger protein 511 OS=Homo sapiens GN=ZNF511 PE=1 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 6.800e-19 Identity = 51/147 (34.69%), Postives = 79/147 (53.74%), Query Frame = 1
BLAST of Spo03381.1 vs. ExPASy Swiss-Prot
Match: L2K1_DROME (Protein lethal(2)k10201 OS=Drosophila melanogaster GN=l(2)k10201 PE=4 SV=2) HSP 1 Score: 66.2 bits (160), Expect = 5.800e-10 Identity = 44/139 (31.65%), Postives = 63/139 (45.32%), Query Frame = 1
BLAST of Spo03381.1 vs. TAIR (Arabidopsis)
Match: AT5G14140.1 (zinc ion binding;nucleic acid binding;zinc ion binding) HSP 1 Score: 288.5 bits (737), Expect = 4.000e-78 Identity = 148/239 (61.92%), Postives = 181/239 (75.73%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo03381.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo03381.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo03381.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 4
BLAST of Spo03381.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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