Spo03390 (gene) | SpinachBase

Overview


Name	Spo03390
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Transmembrane protein, putative
Location	chr3 : 94450163 .. 94452041 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTAGTATTCCTCATGTCCGGACAGAGTTCCATTGCGCACAAATCAATCAAAATTCTTATCTCTTTTCTTTTGCCGCCATCAATGTGAAACCCAGTAATAATTCCTCAATCCAAAACATTCAAAACAATTAACAAAAACCCAAATCAAACTCATCCAAACGTTGTGAAAAATGTCGACAAACGATGAAGATCCACAAACTAGGGTTTTACACGACCTATGTTCCATGATATTTAACATTCTCCGCTGTCCACCTACGATCACTCTCCCTTCTCCGGCGACATTCTCGCCGGAAAATGCATCATCTTCCTCAATTCGCCGCAACACGGCGCAATACTACCCGGAACAGATATCTCCGACGGCGTTTGCGTGCTTGTTCTTGGGGATTTCGCTGATTTTGATGATACTTGGATCAGTGGCTTTTCTGATAGGGTTTATATTGATGCCGTGGATAATTGGACTGGTTTTGGTCTTCTACTTTGCTGGAATTCTCTCCAATTTGTCATATTTTGGACGATCTTGTCTCTCCTGGGCTTTTTTCCCCCAAGATGTTCATGGTTAGGTTTCTTCTTTTCTTCTATTTTAGGGTTCTTTTAGCGCCTTATTTGGTTTATTGTTGATATTTTAATACTGATTTAGTGATTGTGATAGTATGATATTTGACTGATTAGCTAATTGTTTGTAGTCATTAGATAAATCACATTTCTGTGTTCTATCCATTATGTTTGCATTTGCTAAGCTATTGTGTACTTTGTGAGGATGGACATTTGGAACTTATCGTTTTAGAAAAAGGAGTCGATTTCAAGCAGTGTTTATGGATTATGTAATAATCAGTAGTTGATTCGATTCGTTGGTCTGAGGTTATTAACTTCAATTTCATTGCAGCCCATGATTGAGCTTATCAATTTCAGTTAGTTCCTTTTATGAGCTCACTTGGCGTTTTGGCGTTGCTATATAAACTTAAGTTTGGATAACCAAAGTGCATATGTTAATTGTATTTTGGTTGCGTTCTTTTCAGCTTGGAAATGTTTATGAGGATCACATGGTTTGTCAAATGTAGAGGGACCGGGTTGCTGAAAATACAGTGCTGTTTGTCCATGTATTGGTGTTGTAAGATTGTTTTTCTTCTTACTGAATGCCAATTGTCTGGCTTCGGATTCTCACATTCTTGCTAACTATACATATGCGGTAGCTACTCGCCTGCTCATTCAGTTATTTAGTACGTCTAAAGCAGCTTGCAAACCTAATTCTACTGTAATGTGCAATGGTGGCAGTAACTTCTTGGCTATGTTTAAACATTCTCATTCCTTTCAGCTCGGAAATGCTAAGGAGGATGACATGGCTTGTCAAATGTAGAGAGAAATTTCTGGTTGCTGAATTCCGATTGCTGTATCTTGTCCACATATTAGTGTTGTAAGATTGTTTTTCCCCTTCTACGAATGCTAATATATTGGTTTCTGCATTCTCATATTATTGTTGAAAATATATCAATGGCTCTTTCAGTTACTAAGTATGCCAAAAGCAACTGTGCAATCCAAAATTTATTATTCCGTAATGCTGGAAGAACCTTGCAACTGCAAGGATACATGATATACATCTTATGAGTTCTCATCCACTTCAAGGTCATTTCTGCTCCATGTACCTAAACGCATTTAGAATGAAGCATAGTCTGTTATAACTTCCCTACTTGTGTCATTATATGGCACCATTTTCCATATCGGAATGTCCCTAAATGCATATCCAATGGTTCCCACCACTTCAGTCTCTCATCAAGTCATCAGCCATACCCCACTGCTTTTCTCTGTCATCAATTTCTCCTAACCACATACTCTGTATTAGAAACATTGCCTCACTTAAATGGTGCATACAAAAAGCGCCGG

mRNA sequence

ATTTAGTATTCCTCATGTCCGGACAGAGTTCCATTGCGCACAAATCAATCAAAATTCTTATCTCTTTTCTTTTGCCGCCATCAATGTGAAACCCAGTAATAATTCCTCAATCCAAAACATTCAAAACAATTAACAAAAACCCAAATCAAACTCATCCAAACGTTGTGAAAAATGTCGACAAACGATGAAGATCCACAAACTAGGGTTTTACACGACCTATGTTCCATGATATTTAACATTCTCCGCTGTCCACCTACGATCACTCTCCCTTCTCCGGCGACATTCTCGCCGGAAAATGCATCATCTTCCTCAATTCGCCGCAACACGGCGCAATACTACCCGGAACAGATATCTCCGACGGCGTTTGCGTGCTTGTTCTTGGGGATTTCGCTGATTTTGATGATACTTGGATCAGTGGCTTTTCTGATAGGGTTTATATTGATGCCGTGGATAATTGGACTGGTTTTGGTCTTCTACTTTGCTGGAATTCTCTCCAATTTGTCATATTTTGGACGATCTTGTCTCTCCTGGGCTTTTTTCCCCCAAGATGTTCATGCTTGGAAATGTTTATGAGGATCACATGGTTTGTCAAATGTAGAGGGACCGGGTTGCTGAAAATACAGTGCTGTTTGTCCATGTATTGGTGTTGTAAGATTGTTTTTCTTCTTACTGAATGCCAATTGTCTGGCTTCGGATTCTCACATTCTTGCTAACTATACATATGCGGTAGCTACTCGCCTGCTCATTCAGTTATTTAGTACGTCTAAAGCAGCTTGCAAACCTAATTCTACTGTAATGTGCAATGGTGGCAGTAACTTCTTGGCTATGTTTAAACATTCTCATTCCTTTCAGCTCGGAAATGCTAAGGAGGATGACATGGCTTGTCAAATGTAGAGAGAAATTTCTGGTTGCTGAATTCCGATTGCTGTATCTTGTCCACATATTAGTGTTGTAAGATTGTTTTTCCCCTTCTACGAATGCTAATATATTGGTTTCTGCATTCTCATATTATTGTTGAAAATATATCAATGGCTCTTTCAGTTACTAAGTATGCCAAAAGCAACTGTGCAATCCAAAATTTATTATTCCGTAATGCTGGAAGAACCTTGCAACTGCAAGGATACATGATATACATCTTATGAGTTCTCATCCACTTCAAGGTCATTTCTGCTCCATGTACCTAAACGCATTTAGAATGAAGCATAGTCTGTTATAACTTCCCTACTTGTGTCATTATATGGCACCATTTTCCATATCGGAATGTCCCTAAATGCATATCCAATGGTTCCCACCACTTCAGTCTCTCATCAAGTCATCAGCCATACCCCACTGCTTTTCTCTGTCATCAATTTCTCCTAACCACATACTCTGTATTAGAAACATTGCCTCACTTAAATGGTGCATACAAAAAGCGCCGG

Coding sequence (CDS)

ATGTCGACAAACGATGAAGATCCACAAACTAGGGTTTTACACGACCTATGTTCCATGATATTTAACATTCTCCGCTGTCCACCTACGATCACTCTCCCTTCTCCGGCGACATTCTCGCCGGAAAATGCATCATCTTCCTCAATTCGCCGCAACACGGCGCAATACTACCCGGAACAGATATCTCCGACGGCGTTTGCGTGCTTGTTCTTGGGGATTTCGCTGATTTTGATGATACTTGGATCAGTGGCTTTTCTGATAGGGTTTATATTGATGCCGTGGATAATTGGACTGGTTTTGGTCTTCTACTTTGCTGGAATTCTCTCCAATTTGTCATATTTTGGACGATCTTGTCTCTCCTGGGCTTTTTTCCCCCAAGATGTTCATGCTTGGAAATGTTTATGA

Protein sequence

MSTNDEDPQTRVLHDLCSMIFNILRCPPTITLPSPATFSPENASSSSIRRNTAQYYPEQISPTAFACLFLGISLILMILGSVAFLIGFILMPWIIGLVLVFYFAGILSNLSYFGRSCLSWAFFPQDVHAWKCL

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo03390.1	Spo03390.1	mRNA

Homology

[Close]

BLAST of Spo03390.1 vs. NCBI nr
Match: gi|902188820|gb|KNA11231.1| (hypothetical protein SOVF_137090 [Spinacia oleracea])

HSP 1 Score: 264.6 bits (675), Expect = 9.200e-68
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 1


		  
Query: 1   MSTNDEDPQTRVLHDLCSMIFNILRCPPTITLPSPATFSPENASSSSIRRNTAQYYPEQI 60
           MSTNDEDPQTRVLHDLCSMIFNILRCPPTITLPSPATFSPENASSSSIRRNTAQYYPEQI
Sbjct: 1   MSTNDEDPQTRVLHDLCSMIFNILRCPPTITLPSPATFSPENASSSSIRRNTAQYYPEQI 60

Query: 61  SPTAFACLFLGISLILMILGSVAFLIGFILMPWIIGLVLVFYFAGILSNLSYFGRSCLSW 120
           SPTAFACLFLGISLILMILGSVAFLIGFILMPWIIGLVLVFYFAGILSNLSYFGRSCLSW
Sbjct: 61  SPTAFACLFLGISLILMILGSVAFLIGFILMPWIIGLVLVFYFAGILSNLSYFGRSCLSW 120

Query: 121 AFFPQDVHAWKCL 134
           AFFPQDVHAWKCL
Sbjct: 121 AFFPQDVHAWKCL 133

[Close]

BLAST of Spo03390.1 vs. NCBI nr
Match: gi|731337848|ref|XP_010680009.1| (PREDICTED: uncharacterized protein LOC104895249 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 174.1 bits (440), Expect = 1.600e-40
Identity = 96/134 (71.64%), Postives = 106/134 (79.10%), Query Frame = 1


		  
Query: 1   MSTNDEDPQTRVLHDLCSMIFNILRCPPTITLPSPATFSPE-NASSSSIRRNTAQYYPEQ 60
           M  N+ DPQ RVLHDL SMI +ILR P  +T   PA FSPE  +SSSSIRRNT  YY  Q
Sbjct: 1   MLRNENDPQIRVLHDLFSMIIHILRWPTPVTHRFPARFSPEIPSSSSSIRRNTMPYYTTQ 60

Query: 61  ISPTAFACLFLGISLILMILGSVAFLIGFILMPWIIGLVLVFYFAGILSNLSYFGRSCLS 120
           +SP +FACLFLGISL LM+ GSVAFLIGFILMPWIIGLVL+FYFAG LS+LS FG+S LS
Sbjct: 61  MSPASFACLFLGISLTLMVFGSVAFLIGFILMPWIIGLVLIFYFAGFLSSLSDFGQSFLS 120

Query: 121 WAFFPQDVHAWKCL 134
           WA FPQDV AWK L
Sbjct: 121 WALFPQDVPAWKRL 134

[Close]

BLAST of Spo03390.1 vs. NCBI nr
Match: gi|255547676|ref|XP_002514895.1| (PREDICTED: uncharacterized protein LOC8286777 [Ricinus communis])

HSP 1 Score: 110.5 bits (275), Expect = 2.200e-21
Identity = 65/137 (47.45%), Postives = 88/137 (64.23%), Query Frame = 1


		  
Query: 1   MSTNDEDPQTRVLHDLCSMIFNILRCPPTITLPSPATFSPENASSSSIRRNTAQYYPEQI 60
           M  + ED Q+RV ++L +++ N+LR PP+    S A FS ++ S S  RR  +     QI
Sbjct: 1   MMRSQEDHQSRVFYELSALVLNLLRSPPSSPSSSSAHFSDQSPSESQRRRRPSL---SQI 60

Query: 61  SPTAFACLFLGISLILMILGSVAFLIGFILMPWIIGLVLVFYFAGILSNLSYFGRSCLSW 120
           SP  FA L LGISL LM+ GSV F IGFILMPW++GLV+VFY AG++S +S  GRS L  
Sbjct: 61  SPAGFASLMLGISLALMLCGSVTFFIGFILMPWVLGLVMVFYVAGVVSTISMLGRSFLCH 120

Query: 121 AFFP----QDVHAWKCL 134
           A  P    +++ +WK L
Sbjct: 121 AMTPPSPRKEIPSWKLL 134

[Close]

BLAST of Spo03390.1 vs. NCBI nr
Match: gi|658031016|ref|XP_008350961.1| (PREDICTED: uncharacterized protein LOC103414343 [Malus domestica])

HSP 1 Score: 110.5 bits (275), Expect = 2.200e-21
Identity = 66/134 (49.25%), Postives = 90/134 (67.16%), Query Frame = 1


		  
Query: 5   DEDPQTRVLHDLCSMIFNILRCPPT-ITLPSPATFSPENASSSSIRRNTAQYYPEQISPT 64
           ++D Q+RV ++L +++ N+LR PPT I     +T  P ++SSSS+RR  A     QISP 
Sbjct: 7   EQDQQSRVFYELSALVLNLLRSPPTPIQFSDNSTVMPPSSSSSSLRRPPAA-STAQISPA 66

Query: 65  AFACLFLGISLILMILGSVAFLIGFILMPWIIGLVLVFYFAGILSNLSYFGRSCLSWAFF 124
            FA L LGIS+ LM+ GSV F IGF+LMPW++GLV+V Y AGIL +LS  G+S L +A  
Sbjct: 67  GFASLMLGISMALMLCGSVTFFIGFLLMPWVLGLVMVLYVAGILWSLSVLGKSILCYASA 126

Query: 125 P----QDVHAWKCL 134
           P    +D+ AWK L
Sbjct: 127 PSTPRKDIPAWKLL 139

[Close]

BLAST of Spo03390.1 vs. NCBI nr
Match: gi|950939929|ref|XP_014492090.1| (PREDICTED: uncharacterized protein LOC106754569 [Vigna radiata var. radiata])

HSP 1 Score: 108.6 bits (270), Expect = 8.400e-21
Identity = 65/129 (50.39%), Postives = 85/129 (65.89%), Query Frame = 1


		  
Query: 6   EDPQTRVLHDLCSMIFNILRCPPTITLPSPATFSPENASSSSIRRNTAQYYPEQISPTAF 65
           +D Q+R L+DL +++ N++R PPT     P  FS  N    + RR+     P QISP  F
Sbjct: 9   QDQQSRALYDLSALVLNLIRSPPT-----PLPFS-HNVPPGASRRSP----PPQISPAGF 68

Query: 66  ACLFLGISLILMILGSVAFLIGFILMPWIIGLVLVFYFAGILSNLSYFGRSCLSWAFFP- 125
           A L LGISL LM+ GSV F IGF+LMPW++GLV++FY AGILS+LS FGRS L +A  P 
Sbjct: 69  ASLLLGISLALMLCGSVTFFIGFVLMPWVLGLVMLFYVAGILSSLSVFGRSILCYATAPP 127

Query: 126 ---QDVHAW 131
              +D+ AW
Sbjct: 129 SPRKDIPAW 127

[Close]

BLAST of Spo03390.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QXJ1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_137090 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 6.400e-68
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 1


		  
Query: 1   MSTNDEDPQTRVLHDLCSMIFNILRCPPTITLPSPATFSPENASSSSIRRNTAQYYPEQI 60
           MSTNDEDPQTRVLHDLCSMIFNILRCPPTITLPSPATFSPENASSSSIRRNTAQYYPEQI
Sbjct: 1   MSTNDEDPQTRVLHDLCSMIFNILRCPPTITLPSPATFSPENASSSSIRRNTAQYYPEQI 60

Query: 61  SPTAFACLFLGISLILMILGSVAFLIGFILMPWIIGLVLVFYFAGILSNLSYFGRSCLSW 120
           SPTAFACLFLGISLILMILGSVAFLIGFILMPWIIGLVLVFYFAGILSNLSYFGRSCLSW
Sbjct: 61  SPTAFACLFLGISLILMILGSVAFLIGFILMPWIIGLVLVFYFAGILSNLSYFGRSCLSW 120

Query: 121 AFFPQDVHAWKCL 134
           AFFPQDVHAWKCL
Sbjct: 121 AFFPQDVHAWKCL 133

[Close]

BLAST of Spo03390.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CCJ9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g131280 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.100e-40
Identity = 96/134 (71.64%), Postives = 106/134 (79.10%), Query Frame = 1


		  
Query: 1   MSTNDEDPQTRVLHDLCSMIFNILRCPPTITLPSPATFSPE-NASSSSIRRNTAQYYPEQ 60
           M  N+ DPQ RVLHDL SMI +ILR P  +T   PA FSPE  +SSSSIRRNT  YY  Q
Sbjct: 1   MLRNENDPQIRVLHDLFSMIIHILRWPTPVTHRFPARFSPEIPSSSSSIRRNTMPYYTTQ 60

Query: 61  ISPTAFACLFLGISLILMILGSVAFLIGFILMPWIIGLVLVFYFAGILSNLSYFGRSCLS 120
           +SP +FACLFLGISL LM+ GSVAFLIGFILMPWIIGLVL+FYFAG LS+LS FG+S LS
Sbjct: 61  MSPASFACLFLGISLTLMVFGSVAFLIGFILMPWIIGLVLIFYFAGFLSSLSDFGQSFLS 120

Query: 121 WAFFPQDVHAWKCL 134
           WA FPQDV AWK L
Sbjct: 121 WALFPQDVPAWKRL 134

[Close]

BLAST of Spo03390.1 vs. UniProtKB/TrEMBL
Match: B9RMC6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1079670 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.500e-21
Identity = 65/137 (47.45%), Postives = 88/137 (64.23%), Query Frame = 1


		  
Query: 1   MSTNDEDPQTRVLHDLCSMIFNILRCPPTITLPSPATFSPENASSSSIRRNTAQYYPEQI 60
           M  + ED Q+RV ++L +++ N+LR PP+    S A FS ++ S S  RR  +     QI
Sbjct: 1   MMRSQEDHQSRVFYELSALVLNLLRSPPSSPSSSSAHFSDQSPSESQRRRRPSL---SQI 60

Query: 61  SPTAFACLFLGISLILMILGSVAFLIGFILMPWIIGLVLVFYFAGILSNLSYFGRSCLSW 120
           SP  FA L LGISL LM+ GSV F IGFILMPW++GLV+VFY AG++S +S  GRS L  
Sbjct: 61  SPAGFASLMLGISLALMLCGSVTFFIGFILMPWVLGLVMVFYVAGVVSTISMLGRSFLCH 120

Query: 121 AFFP----QDVHAWKCL 134
           A  P    +++ +WK L
Sbjct: 121 AMTPPSPRKEIPSWKLL 134

[Close]

BLAST of Spo03390.1 vs. UniProtKB/TrEMBL
Match: A0A0S3S1B8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G430800 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.800e-20
Identity = 67/132 (50.76%), Postives = 85/132 (64.39%), Query Frame = 1


		  
Query: 6   EDPQTRVLHDLCSMIFNILRCPPTITLPSPATFS---PENASSSSIRRNTAQYYPEQISP 65
           +D Q+R L+DL +++ N++R PPT     P  FS   P  AS    RR      P QISP
Sbjct: 9   QDQQSRALYDLSTLVLNLIRSPPT-----PLPFSHIVPPGAS----RRTP----PAQISP 68

Query: 66  TAFACLFLGISLILMILGSVAFLIGFILMPWIIGLVLVFYFAGILSNLSYFGRSCLSWAF 125
             FA L LGISL LM+ GSV F IGF+LMPW++GLV++FY AGILS+LS FGRS L +A 
Sbjct: 69  AGFASLLLGISLALMLCGSVTFFIGFVLMPWVLGLVMLFYVAGILSSLSVFGRSILCYAT 127

Query: 126 FP----QDVHAW 131
            P    +D+ AW
Sbjct: 129 APPSPRKDIPAW 127

[Close]

BLAST of Spo03390.1 vs. UniProtKB/TrEMBL
Match: K7MP74_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G004900 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 5.000e-20
Identity = 67/132 (50.76%), Postives = 84/132 (63.64%), Query Frame = 1


		  
Query: 6   EDPQTRVLHDLCSMIFNILRCPPTITLPSPATFSPENASSSSIRRNTAQYYPEQISPTAF 65
           +D Q+R L+DL S++ N+LR        SP TFS E   +S   R   Q    QISP  F
Sbjct: 9   QDEQSRALYDLSSLVLNLLR--------SPLTFSDEVPPAS---RRPGQ---AQISPAGF 68

Query: 66  ACLFLGISLILMILGSVAFLIGFILMPWIIGLVLVFYFAGILSNLSYFGRSCLSWAFFP- 125
           A L LGISL LM+ GSV F IGF+LMPW++GLV++FY AGILS LS FGRS L +A  P 
Sbjct: 69  ASLLLGISLALMLCGSVTFFIGFVLMPWVLGLVMLFYVAGILSTLSVFGRSILCYATSPP 126

Query: 126 ---QDVHAWKCL 134
              +D+ AWK +
Sbjct: 129 SPRKDIPAWKLM 126

[Close]

BLAST of Spo03390.1 vs. TAIR (Arabidopsis)
Match: AT1G27290.1 (unknown protein)

HSP 1 Score: 94.7 bits (234), Expect = 4.500e-20
Identity = 62/144 (43.06%), Postives = 86/144 (59.72%), Query Frame = 1


		  
Query: 1   MSTNDEDPQTRVLHDLCSMIFNILRCPPT-ITLPS-----PATFSPENASSSSIRRNTAQ 60
           M    ++ Q+RV +DL S++ N+LR PP  I+LP      PA   P     SS R +++ 
Sbjct: 2   MRRQRDEQQSRVFYDLSSLVLNLLRSPPMPISLPDHFPDPPARIRPP---FSSHRFSSSS 61

Query: 61  YYPEQISPTAFACLFLGISLILMILGSVAFLIGFILMPWIIGLVLVFYFAGILSNLSYFG 120
                ISP+ FA L LGIS+ LM+ GSV F IGF+LMPW++ L+LVFY AGI+S +S  G
Sbjct: 62  PSLAHISPSGFASLLLGISVALMLCGSVTFFIGFLLMPWVLALILVFYVAGIVSAISMVG 121

Query: 121 RSCLSWAFFP-----QDVHAWKCL 134
           RS L +   P     +++  WK L
Sbjct: 122 RSILCYVLTPPSPSGKEISEWKLL 142

The following BLAST results are available for this feature:

BLAST of Spo03390.1 vs. NCBI nr
BLAST of Spo03390.1 vs. UniProtKB/TrEMBL
BLAST of Spo03390.1 vs. ExPASy Swiss-Prot
BLAST of Spo03390.1 vs. TAIR (Arabidopsis)

BLAST of Spo03390.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902188820\|gb\|KNA11231.1\|	9.2e-68	100.	hypothetical protein SOVF_1370...	[more]
gi\|731337848\|ref\|XP_010680009.1\|	1.6e-40	71.6	PREDICTED: uncharacterized pro...	[more]
gi\|255547676\|ref\|XP_002514895.1\|	2.2e-21	47.4	PREDICTED: uncharacterized pro...	[more]
gi\|658031016\|ref\|XP_008350961.1\|	2.2e-21	49.2	PREDICTED: uncharacterized pro...	[more]
gi\|950939929\|ref\|XP_014492090.1\|	8.4e-21	50.3	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo03390.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QXJ1_SPIOL	6.4e-68	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CCJ9_BETVU	1.1e-40	71.6	Uncharacterized protein OS=Bet...	[more]
B9RMC6_RICCO	1.5e-21	47.4	Putative uncharacterized prote...	[more]
A0A0S3S1B8_PHAAN	3.8e-20	50.7	Uncharacterized protein OS=Vig...	[more]
K7MP74_SOYBN	5.0e-20	50.7	Uncharacterized protein OS=Gly...	[more]

BLAST of Spo03390.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo03390.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT1G27290.1	4.5e-20	43.0	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34781	FAMILY NOT NAMED	coord: 1..126 score: 5.7
None	No IPR available	PANTHER	PTHR34781:SF2	SUBFAMILY NOT NAMED	coord: 1..126 score: 5.7

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0005737	cytoplasm

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo21383	0.73	Barchart \| Table
Spo04653	0.71	Barchart \| Table
Spo14938	0.71	Barchart \| Table
Spo02696	0.71	Barchart \| Table
Spo22811	0.70	Barchart \| Table
Spo16797	0.70	Barchart \| Table
Spo16695	0.70	Barchart \| Table
Spo21155	0.69	Barchart \| Table
Spo26986	0.69	Barchart \| Table
Spo00079	0.68	Barchart \| Table
Spo05942	0.68	Barchart \| Table
Spo06953	0.68	Barchart \| Table
Spo07306	0.68	Barchart \| Table
Spo08114	0.68	Barchart \| Table
Spo11317	0.68	Barchart \| Table
Spo12302	0.68	Barchart \| Table
Spo10404	0.67	Barchart \| Table
Spo09149	0.67	Barchart \| Table
Spo03572	0.67	Barchart \| Table
Spo23857	0.67	Barchart \| Table
Spo22261	0.67	Barchart \| Table
Spo02932	0.67	Barchart \| Table
Spo23384	0.67	Barchart \| Table
Spo10235	0.67	Barchart \| Table
Spo02573	0.67	Barchart \| Table
Spo15302	0.67	Barchart \| Table
Spo18171	0.67	Barchart \| Table
Spo13490	0.67	Barchart \| Table
Spo18828	0.66	Barchart \| Table
Spo14678	0.66	Barchart \| Table
Spo16213	0.66	Barchart \| Table
Spo16996	0.66	Barchart \| Table
Spo17161	0.66	Barchart \| Table
Spo18502	0.66	Barchart \| Table
Spo13193	0.66	Barchart \| Table
Spo23549	0.66	Barchart \| Table
Spo25817	0.66	Barchart \| Table
Spo26045	0.66	Barchart \| Table
Spo21446	0.65	Barchart \| Table
Spo12370	0.65	Barchart \| Table