Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTTCAATCGACAGGATTACATAGAAGAACTCGAAAAGCTTCCCAAAGCTAATATGTTTGACTTGTTTCAAAAGAGGTATCTACGTTCTGTAACGGTAAGACTTCTACCCTTGTTATATTTTATCAGTGTCAAATTTGTGAATCCATAAGTTTTCAAACAAAATAATTGAAATTTTCTGATGTCAGATAGGAGTTGGATTGATAGTTTGCCAACAGTTTGGGGGAATTAACGGTATCTGCTTCTATGTCAGCAATATCTTTGAGACGGCTGGTAAATACTCTATTTTTAAAACTCTGTTTTAAAAAAGGAAAATACTAGTACATTTTTACTAAATGCGCAAAACCACTGTCTTCTAAAATTTGATTTATATGTACAGGATTTTCTCCAAGCATTGGTACTATAATATATGCTTTGCTTCAGGTTCGAAAAACATACTTCCTGTTGTAGTAGGATAAGTTATCATGTGTTTGTGTTCCAACTTTAAAGAATATATCTCCACAACGGAATTTGGTGTTTATTGGAGACCCCGTATCTAATTTGGTATGTGGGTTGAGTCCTATGAATAGTCCTTCAGAATAGCGGATCGGGTAAATAGTGGTTGATTGAGATAATGTAGTTCTTTAGTGCGTTTATAACTGTAATGCAATATGAACTGCTAACATTAGTGCAGAAGGAGCTGAATGACTGATATTTATCATGAAGATTTTTTTTTATTTTTTTTTATTTAGGTGCCTTGGTTGTTGGCAGTGTCTCTGAAGCCGAAAGTTTTTGAAGGGATGCATGTAAAGCCCTAGCTTTACTCTCACCTGGCCCAAAACCTGGTAATCAAAAGTTAAATTCTTGATAGGTCGGGCTCAAATTGGGCTTAAAATCTGTCCCAACCCCCTCTATTTTTGGGCCGGGCTCAAGTTGATCGAGTCTAATATGAAAATGCAGTAAGCACTTTAGCAATTAGCAGTTACTAACTGTTAATCATTTTTTCCTGATCCTGTTTCAGACTGAGCTAATTGATCAAGCAGTAAAAGGAACACTGAATGTCCTTACATCCTGCGCCAGAATCCCAACCATCAAACGCGTAGTTTTCACATCATCAATGGCTGCAGTTCTGCTCATTGGTAGACCTCTAACTGCTGAAAGTGTAGTAGATGAAACATGGTTTTTTGTCCCAGAAATCTGCGAGAAACAACAAATGGTTTGCACACTTACTTGCCATTAAATTCTGATCTTATTTTTTGATCTGATTTTATGGTTGGTATGACAGAAAATAACTAACTAAAACCTGGTTTATGTTATGCAGAAGTGGTATCTTTTCTCAAAGACATTGGCTGAAGAAGCTGCATGGGATTTTGTTAAAGAACATGAGCTTGATATGGTGTCGATAAACCCTGCAATTGTTATAGGCCCTTTGCTGCAGCCAACAATCAATACAAGTTCTTTTGCTGTTTTAAGCTTGGTTAATGTTATGATCATCTTGGCTTTATGTATATGTTGCTGGAATTTTATGCTCTCTAATAATATGTCATCTCATGAGACATAG ATGGCTTTCAATCGACAGGATTACATAGAAGAACTCGAAAAGCTTCCCAAAGCTAATATGTTTGACTTGTTTCAAAAGAGGTATCTACGTTCTGTAACGATAGGAGTTGGATTGATAGTTTGCCAACAGTTTGGGGGAATTAACGGTATCTGCTTCTATGTCAGCAATATCTTTGAGACGGCTGGATTTTCTCCAAGCATTGGTACTATAATATATGCTTTGCTTCAGACTGAGCTAATTGATCAAGCAGTAAAAGGAACACTGAATGTCCTTACATCCTGCGCCAGAATCCCAACCATCAAACGCGTAGTTTTCACATCATCAATGGCTGCAGTTCTGCTCATTGGTAGACCTCTAACTGCTGAAAGTGTAGTAGATGAAACATGGTTTTTTGTCCCAGAAATCTGCGAGAAACAACAAATGAAGTGGTATCTTTTCTCAAAGACATTGGCTGAAGAAGCTGCATGGGATTTTGTTAAAGAACATGAGCTTGATATGGTGTCGATAAACCCTGCAATTGTTATAGGCCCTTTGCTGCAGCCAACAATCAATACAAGTTCTTTTGCTGTTTTAAGCTTGGTTAATGTTATGATCATCTTGGCTTTATGTATATGTTGCTGGAATTTTATGCTCTCTAATAATATGTCATCTCATGAGACATAG ATGGCTTTCAATCGACAGGATTACATAGAAGAACTCGAAAAGCTTCCCAAAGCTAATATGTTTGACTTGTTTCAAAAGAGGTATCTACGTTCTGTAACGATAGGAGTTGGATTGATAGTTTGCCAACAGTTTGGGGGAATTAACGGTATCTGCTTCTATGTCAGCAATATCTTTGAGACGGCTGGATTTTCTCCAAGCATTGGTACTATAATATATGCTTTGCTTCAGACTGAGCTAATTGATCAAGCAGTAAAAGGAACACTGAATGTCCTTACATCCTGCGCCAGAATCCCAACCATCAAACGCGTAGTTTTCACATCATCAATGGCTGCAGTTCTGCTCATTGGTAGACCTCTAACTGCTGAAAGTGTAGTAGATGAAACATGGTTTTTTGTCCCAGAAATCTGCGAGAAACAACAAATGAAGTGGTATCTTTTCTCAAAGACATTGGCTGAAGAAGCTGCATGGGATTTTGTTAAAGAACATGAGCTTGATATGGTGTCGATAAACCCTGCAATTGTTATAGGCCCTTTGCTGCAGCCAACAATCAATACAAGTTCTTTTGCTGTTTTAAGCTTGGTTAATGTTATGATCATCTTGGCTTTATGTATATGTTGCTGGAATTTTATGCTCTCTAATAATATGTCATCTCATGAGACATAG MAFNRQDYIEELEKLPKANMFDLFQKRYLRSVTIGVGLIVCQQFGGINGICFYVSNIFETAGFSPSIGTIIYALLQTELIDQAVKGTLNVLTSCARIPTIKRVVFTSSMAAVLLIGRPLTAESVVDETWFFVPEICEKQQMKWYLFSKTLAEEAAWDFVKEHELDMVSINPAIVIGPLLQPTINTSSFAVLSLVNVMIILALCICCWNFMLSNNMSSHET Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo03394.1 vs. NCBI nr
Match: gi|902128493|gb|KNA04196.1| (hypothetical protein SOVF_201920, partial [Spinacia oleracea]) HSP 1 Score: 214.2 bits (544), Expect = 2.400e-52 Identity = 110/122 (90.16%), Postives = 113/122 (92.62%), Query Frame = 1
BLAST of Spo03394.1 vs. NCBI nr
Match: gi|902191735|gb|KNA11907.1| (hypothetical protein SOVF_130790 [Spinacia oleracea]) HSP 1 Score: 212.6 bits (540), Expect = 6.900e-52 Identity = 110/127 (86.61%), Postives = 117/127 (92.13%), Query Frame = 1
BLAST of Spo03394.1 vs. NCBI nr
Match: gi|731325733|ref|XP_010673662.1| (PREDICTED: tetraketide alpha-pyrone reductase 1-like isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 189.5 bits (480), Expect = 6.200e-45 Identity = 96/120 (80.00%), Postives = 104/120 (86.67%), Query Frame = 1
BLAST of Spo03394.1 vs. NCBI nr
Match: gi|848888972|ref|XP_012844665.1| (PREDICTED: cinnamoyl-CoA reductase 1-like [Erythranthe guttata]) HSP 1 Score: 160.6 bits (405), Expect = 3.100e-36 Identity = 83/120 (69.17%), Postives = 98/120 (81.67%), Query Frame = 1
BLAST of Spo03394.1 vs. NCBI nr
Match: gi|641842317|gb|KDO61223.1| (hypothetical protein CISIN_1g0202661mg, partial [Citrus sinensis]) HSP 1 Score: 159.8 bits (403), Expect = 5.300e-36 Identity = 87/149 (58.39%), Postives = 104/149 (69.80%), Query Frame = 1
BLAST of Spo03394.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QCF1_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_201920 PE=4 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 1.600e-52 Identity = 110/122 (90.16%), Postives = 113/122 (92.62%), Query Frame = 1
BLAST of Spo03394.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QXB0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_130790 PE=4 SV=1) HSP 1 Score: 212.6 bits (540), Expect = 4.800e-52 Identity = 110/127 (86.61%), Postives = 117/127 (92.13%), Query Frame = 1
BLAST of Spo03394.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CLC1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g072920 PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 4.300e-45 Identity = 96/120 (80.00%), Postives = 104/120 (86.67%), Query Frame = 1
BLAST of Spo03394.1 vs. UniProtKB/TrEMBL
Match: A0A022QXW5_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a010032mg PE=4 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 2.200e-36 Identity = 83/120 (69.17%), Postives = 98/120 (81.67%), Query Frame = 1
BLAST of Spo03394.1 vs. UniProtKB/TrEMBL
Match: V4W0N1_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v100159012mg PE=3 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 3.700e-36 Identity = 87/149 (58.39%), Postives = 104/149 (69.80%), Query Frame = 1
BLAST of Spo03394.1 vs. ExPASy Swiss-Prot
Match: ERDL7_ARATH (Sugar transporter ERD6-like 7 OS=Arabidopsis thaliana GN=At2g48020 PE=2 SV=2) HSP 1 Score: 105.5 bits (262), Expect = 7.400e-22 Identity = 51/71 (71.83%), Postives = 58/71 (81.69%), Query Frame = 1
BLAST of Spo03394.1 vs. ExPASy Swiss-Prot
Match: TKPR1_ARATH (Tetraketide alpha-pyrone reductase 1 OS=Arabidopsis thaliana GN=TKPR1 PE=1 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.600e-16 Identity = 48/119 (40.34%), Postives = 80/119 (67.23%), Query Frame = 1
BLAST of Spo03394.1 vs. ExPASy Swiss-Prot
Match: TKPR2_ARATH (Tetraketide alpha-pyrone reductase 2 OS=Arabidopsis thaliana GN=TKPR2 PE=1 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.100e-14 Identity = 45/120 (37.50%), Postives = 75/120 (62.50%), Query Frame = 1
BLAST of Spo03394.1 vs. ExPASy Swiss-Prot
Match: DFRA_CALCH (Dihydroflavonol-4-reductase OS=Callistephus chinensis GN=F PE=2 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 2.000e-14 Identity = 48/122 (39.34%), Postives = 72/122 (59.02%), Query Frame = 1
BLAST of Spo03394.1 vs. ExPASy Swiss-Prot
Match: CCR1_ARATH (Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 2.500e-14 Identity = 47/114 (41.23%), Postives = 70/114 (61.40%), Query Frame = 1
BLAST of Spo03394.1 vs. TAIR (Arabidopsis)
Match: AT5G19440.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 152.9 bits (385), Expect = 2.300e-37 Identity = 78/120 (65.00%), Postives = 95/120 (79.17%), Query Frame = 1
BLAST of Spo03394.1 vs. TAIR (Arabidopsis)
Match: AT1G51410.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 148.3 bits (373), Expect = 5.600e-36 Identity = 74/119 (62.18%), Postives = 93/119 (78.15%), Query Frame = 1
BLAST of Spo03394.1 vs. TAIR (Arabidopsis)
Match: AT1G09480.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 125.2 bits (313), Expect = 5.100e-29 Identity = 61/120 (50.83%), Postives = 83/120 (69.17%), Query Frame = 1
BLAST of Spo03394.1 vs. TAIR (Arabidopsis)
Match: AT1G09490.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 121.7 bits (304), Expect = 5.600e-28 Identity = 65/139 (46.76%), Postives = 91/139 (65.47%), Query Frame = 1
BLAST of Spo03394.1 vs. TAIR (Arabidopsis)
Match: AT1G09500.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 120.6 bits (301), Expect = 1.300e-27 Identity = 59/119 (49.58%), Postives = 86/119 (72.27%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo03394.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo03394.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo03394.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo03394.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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