Spo03422 (gene)

Overview
NameSpo03422
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr4 : 59535451 .. 59540107 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGAAGTGTGTGAACTTTGGGTTTTATGTAACGTTGTTGCAGTGGCAATTGAATATCGGAAACAATCTCTGAGTCTTATCGAATTTGCTTCACTTGAGCAGTCGATCTTGCCTTGTGCTTCTAAAAAACTCATGTCTATATTTTCTTGCTGGAGTGTGGGTTCTATGGGGGAAACAAACATGACCTTGTTTTTCTAAGTTGCTCATAGGGGTATGCTTGAAGGTGAAGCCAATCAAGCCATCTCATTTACAGTATAGTAGTAGACTTTAAAAAGTAGTAGCCATCTCATAGGGGTCTACTTGTTGTGGACTGGAAATTTACTTTAGCTCTTGCTGATGCTGTCTGATCTAAATTTAAAAGTACTTATCTTGTAATATGGACTTCAAATTATCGAGAAAGGTTATGTTTTACAGGTCATAATATGAAGCTTTAGAGGTCCATCTTTTTTGTTGATACAAAAGGTTGTTTCTTGTTTGCTGATTTTATGGTTTCTGAGTTTTGATGGTTTGAATTTGTATATCACAATGGAAATTTTGTTCGTGTGATTCATAATTCTATTTTCTGGAGTTAGAATATGTAGAATAGAGTTTGGTGGATTGAAAATGATTGTTTTCTGGAGTCAGAACATAGGCAGAGTGAAGTTTGGAGGACTGAAAATTGTTGTTCCTAGAATTGGAAATTGTCTATATTGGTCAAGATATTCGTGTTCAACATTGAACTATATAGGGGTTGAGTTGGTGTTTGTCTATGAGAATTCAGATGTTTGACTTTATACCAGGTGTTTGCCAAATCCATGCTTATATCCTTGTTCATAAAGTCTTAATTGTTGAGAGCATGAGAATTAGTTTTCTTGGATAGTTACATGCTATGCTAATTCAATTTGAAATGATTGAATTCTGCACTTACGGCTTATAGTTAGCTTGCTATATGTCTACAGTTAATTGCTTTTGCAAATGGTAGAGACTTGAGCACTCAGTCACTTTGGCTGAATGAAGCTAGAGGTTATTTATTTTTTGAACTCAGATAACTGTTTATTAGAGAGAGAATTGTGGTTGTGTAGTATATTTCTTTTAATCTTAATACAGCAAACTTACAGTGTGTGTAACAGTGTAAATATGGTGTCTGAAATTGTTTTGTTTATTTGATCCTCTGGATTTTTAACATAAACTTTACAGAATCTGATGCACTATCTATTTTGCATATGACTGTCAATCTTTCAGACTTAAAATTAAACGCCTTAGCATCAGTTTAGATAATTTATGTTTAGAAATCACTCATAGAAGTAATGTGGTTAATTTTTTTTTCTAGTGAAGACTTAATTTTCAAGAAACATGTCTTTGTATGTGCGTGCAGACTAAATGCATTAATTTTCTCATGTCTCTGACTCGAATGTGGTTTTCTCACTCACAATATTCCTTGTAGCTCAATAGTCAATCAATAAAATTTCACGCTCGTTAGCTAATGGCCTTATGCACCATATTTGAAATGATATGTGACATAGGTCCTTATATTTTCAACGTTTCTATAACACAAAGACTTTGAATCTGTTGTCTAAAAATCCATATCCCAGTGCAAATGTGTGCTGTCAAATGGAAAGCTGGCATGGAGGTGGACTAAATATAATGCATCTAGTATCAAAAGAGTATGAACTATTTGAGACCTTGAGGCTTTATAAGCTTATTTCAAAATATCATGTTTATTGTTTCAACTGATGTAGGCTCAAGCATGTCAGAACCTAATGGATGAGACAGACAAGGAATTTAAAAAGATGTCTGAGAGGGTAAGTTGTTGAAGTTTGAGTCACTCTCTCTTCTTAGTTTCTGCTCCTGCATACTTGGTTTCTGCTCTTGCATATTATGCGGTGCTTCAGTTGTTGTTGTTGGTCTACTTTCTGCTAGTATCTGCTTCTGAATTTTGCTACAGGGATTCAGTTTTGATGTGCCGGCTGTTGGTACTACAATCTAGTTGTGATTTCAATTAGTACTATTTGCTCGAGATTTTTGATGTCTGATCAAACTAATTAGGATTTACATGTTGTTGTGAATTCACATATGCTGTTGTGTTAATTTTGTGTATTTTTATCTTTATATTATGTAAAATTTTATGTCTTTTATCATGTAAAAACACTGAAAATTTATGTTTGCAATGCTATGAACTGACTTACTGAATATTTGCATATGTGCAACATGCTTTTTTATATCATTGTTTCAAGATTGATTACTTCGCACTGCAATGTATACATTTGCTCGGTTTCACCCTTTTGGGGGTATTTGCAGCAAATTTTGCAACATTCTCCCCAATTCTTCCTCCAGAAGCCGTGAGATTTGTTTCAACACGTTCGGCATTGATTCTGCTCTTATATGTTTGAGATGATTTTGTTGTGTAATTTTTAAATTATCCAGGACAAAAGAGTTTTAATTAAAATATGCCACCTTAGTGTGCAAGGGGTTGTTTGAAATTACTAGAGCTATCAAGGCCTTACACGACAATACCTAATGTGACCTGAATAGATATGATCTTGCGTTTGATTTGCACAGAACCATTGGCCTGACAGGATAAAACTAATATGCATCTAGTCAATTTGGTGCGAAAACCTGCTTTGTGCTGCTCACAGGTACCCTAATAAGCATGATTGTCGGTTTGATTATCAGGCTGCTGCTCAGAATGCTATAGCTAAAGCCAATCCGATTGTCAAGGCAGCATGATGATAAGTCAATAGTTGCTCTTATTGATGTTTCTTGCGTTTAGTATTGTTGTATTCCTTCTCCTTCATCCTTATGTTTATAAACTGCTGTTGAGTTACCAAAGTTGACTCCTGCTGACTTTTTGTTTGCCAGCTATTTTGTTTTCATGGTTTTGGTTTTAAGTTCAATCGATTTCACGTGTTTGAGATTAACTGAGATTAAGCAAAAATATGGTGGTTTCCCTGTGATGAAACATTACCTCTACCTAAGAAGGAAAGCCAAGGGAATCCATGGGATTAAGATCAGTGGGTTCCCCATTGACACTGATAGTACATTGACCTTCACATAGAATATGACGCACTACTTTATCGGTTTTGGTCTTGTTAATGATCTGGAGAATGGAACTCTCCTGGTTTTGAAGAATTATGCTACCTGTGCTAACTTTTGTTTCTGGTATCTCATAAAATTCTCTAAGCAAAGTCTTAACTTCTTCACTAGTATTCATAACCTCACTAAACTCATTCCTTCTAACTGTTCTATCTACTATTGCTAGACAAACACTGGATGTCTGGATTTACACAGGACATGTTTGTAATCACTATCAATAACATCCATGCAGGCTTCATATCTGTTATAGGGAAAGACAACGTTATTTAGAAGCGGAGCGTCCTGTGTTTTTGAAAAATTTATGCCATGTTCTCTTCACATGATTCTTACATGACTAAATAAGTTTTACTGATGTTTTCTCCTTCCCAGACAATCTTTCTGCTTGCCGATTCTCACTTGATTTTCATAGTTTCTGTTAACGTGTTGTTGTTCTTTGTATATATTATACATTTATATACGAAGTACTTCACATGTCATACTGGGTGTCAATACGAGATGCATTTCTTCATCGTAAAATTATTGCAGGCCATATATTTCCTCTTCTAACTTTTAGTTTTGAGTTGGTCCGAATGTAATGCCATTGTGCTCTAACTTTTGCTTGCTAATCGACTTGCTGTTGTTCCATAGTTTATCGAAGGGATCCATTTTCTTGTACTGATGATTTGCTCTAGTTTTATCTGCCTAATTGACTTATTGGTGGGTCAGTACTACCAGCTTTTTGGTGAAAGGCTAACATAGAGAATATAGATAGTGTCTTACGACTATTAGAAGAAAATGGATAAATAAATTTCCTCTTCTCACTTATTAGTTTTCCTCCCTACTACACGTTATTTTAGTTCCTTTCTTGTACACGGTCTCTTTATCCAATATTCTGTAATTGATTAGTTAATAGTCTATATGCTGGATAAACTAAGAGTGGACACTGACATTTATCTTTCATATTTAGGTAGTGGAGCTTCAGATGATGAATCTGTTGGATTTGGAAGCTAGGCCTCCGTAGGTCAGTCACTCAGTCAGTAAATCAGGGAGTAAGAGGAAGCTGAAAGAGGATTCAGCAGAAAAATAAATAGTAACCTCCAGTACCTGCTGCACTTGTACAGTTACCGATTCTATGATTTAAACTAAACTGTTATTCTTGCTTATCGAAACTGGTTTTTGCTGCAGTAAATCTTCTGCGGTATGTGCTCCTGCTACTGAATTTTGCTGCTGAGATTCAGTGTTTGAATCAATTTTCTGGATATAACCCTTCTTTATAATACAGTAATAAGGGAGAAGAAGAAGAACAAAAGGGGTGGGGCCCATAATTAATGAAGTTACCTGCTTCAAGGGGTTATAATTTACTATTGTGGTTTAATTTAAGGAAGTATTTATTCGTTTTCTAAATTGTTTAGTCTTAAAACATTTTTCAGCCTAGTATTTTAAGTAGTACTACCATTAATTCTTGAAAGCCTATTAGCTCAAATGGTAGAGCAATGTGCCACTGGGCCACGTACATATATGTAGGTTCGAGTCCTATATAGGCTGCAATTATATATGTATATATATAATATATATTATATATTCGCTCAAAAATATAAAAAAT

mRNA sequence

ATGAATGAAGTGTGTGAACTTTGGGTTTTATGTAACGTTGTTGCAGTGGCAATTGAATATCGGAAACAATCTCTGAGTCTTATCGAATTTGCTTCACTTGAGCAGTCGATCTTGCCTTGTGCTTCTAAAAAACTCATTTCAATCGATTTCACGTGTTTGAGATTAACTGAGATTAAGCAAAAATATGGTGGTTTCCCTGTGATGAAACATTACCTCTACCTAAGAAGGAAAGCCAAGGGAATCCATGGGATTAAGATCAGTGGGTTCCCCATTGACACTGATAGTAGTGGAGCTTCAGATGATGAATCTGTTGGATTTGGAAGCTAGGCCTCCGTAGGTCAGTCACTCAGTCAGTAAATCAGGGAGTAAGAGGAAGCTGAAAGAGGATTCAGCAGAAAAATAAATATAAATCTTCTGCGGTATGTGCTCCTGCTACTGAATTTTGCTGCTGAGATTCAGTGTTTGAATCAATTTTCTGGATATAACCCTTCTTTATAATACAGTAATAAGGGAGAAGAAGAAGAACAAAAGGGGTGGGGCCCATAATTAATGAAGTTACCTGCTTCAAGGGGTTATAATTTACTATTGTGGTTTAATTTAAGGAAGTATTTATTCGTTTTCTAAATTGTTTAGTCTTAAAACATTTTTCAGCCTAGTATTTTAAGTAGTACTACCATTAATTCTTGAAAGCCTATTAGCTCAAATGGTAGAGCAATGTGCCACTGGGCCACGTACATATATGTAGGTTCGAGTCCTATATAGGCTGCAATTATATATGTATATATATAATATATATTATATATTCGCTCAAAAATATAAAAAAT

Coding sequence (CDS)

ATGAATGAAGTGTGTGAACTTTGGGTTTTATGTAACGTTGTTGCAGTGGCAATTGAATATCGGAAACAATCTCTGAGTCTTATCGAATTTGCTTCACTTGAGCAGTCGATCTTGCCTTGTGCTTCTAAAAAACTCATTTCAATCGATTTCACGTGTTTGAGATTAACTGAGATTAAGCAAAAATATGGTGGTTTCCCTGTGATGAAACATTACCTCTACCTAAGAAGGAAAGCCAAGGGAATCCATGGGATTAAGATCAGTGGGTTCCCCATTGACACTGATAGTAGTGGAGCTTCAGATGATGAATCTGTTGGATTTGGAAGCTAG

Protein sequence

MNEVCELWVLCNVVAVAIEYRKQSLSLIEFASLEQSILPCASKKLISIDFTCLRLTEIKQKYGGFPVMKHYLYLRRKAKGIHGIKISGFPIDTDSSGASDDESVGFGS
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo03422.1Spo03422.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo03422.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo03422.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo03422.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo03422.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007267 cell-cell signaling
biological_process GO:0009987 cellular process
biological_process GO:0051302 regulation of cell division
biological_process GO:0016567 protein ubiquitination
biological_process GO:0010267 production of ta-siRNAs involved in RNA interference
biological_process GO:0035196 production of miRNAs involved in gene silencing by miRNA
biological_process GO:0000278 mitotic cell cycle
biological_process GO:0009561 megagametogenesis
biological_process GO:0007276 gamete generation
biological_process GO:0006468 protein phosphorylation
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0010467 gene expression
biological_process GO:0009616 virus induced gene silencing
biological_process GO:0051510 regulation of unidimensional cell growth
biological_process GO:0051301 cell division
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0005982 starch metabolic process
biological_process GO:0006075 (1->3)-beta-D-glucan biosynthetic process
biological_process GO:0032875 regulation of DNA endoreduplication
cellular_component GO:0031461 cullin-RING ubiquitin ligase complex
cellular_component GO:0000785 chromatin
cellular_component GO:0005634 nucleus
cellular_component GO:0000148 1,3-beta-D-glucan synthase complex
cellular_component GO:0005819 spindle
molecular_function GO:0016874 ligase activity
molecular_function GO:0019905 syntaxin binding
molecular_function GO:0005515 protein binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0003682 chromatin binding
molecular_function GO:0003843 1,3-beta-D-glucan synthase activity
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0031625 ubiquitin protein ligase binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo051270.73Barchart | Table
Spo113840.70Barchart | Table
Spo258510.70Barchart | Table
Spo041040.70Barchart | Table
Spo067260.70Barchart | Table
Spo177550.70Barchart | Table
Spo158650.69Barchart | Table
Spo235270.69Barchart | Table
Spo240660.69Barchart | Table
Spo056400.69Barchart | Table
Spo230820.68Barchart | Table
Spo172910.68Barchart | Table
Spo172350.68Barchart | Table
Spo079210.68Barchart | Table
Spo001610.68Barchart | Table
Spo119990.68Barchart | Table
Spo099930.68Barchart | Table
Spo106610.68Barchart | Table
Spo268330.68Barchart | Table
Spo006940.68Barchart | Table
Spo008120.68Barchart | Table
Spo233550.68Barchart | Table
Spo066730.68Barchart | Table
Spo090620.67Barchart | Table
Spo011680.67Barchart | Table
Spo013130.67Barchart | Table
Spo026930.67Barchart | Table
Spo027470.67Barchart | Table
Spo049880.67Barchart | Table
Spo063990.67Barchart | Table
Spo132380.67Barchart | Table
Spo133180.67Barchart | Table
Spo148330.67Barchart | Table
Spo154010.67Barchart | Table
Spo226260.67Barchart | Table
Spo239550.67Barchart | Table
Spo258790.67Barchart | Table
Spo266460.67Barchart | Table
Spo134920.66Barchart | Table
Spo030020.66Barchart | Table
Spo149830.66Barchart | Table
Spo035090.66Barchart | Table
Spo100720.66Barchart | Table
Spo099400.66Barchart | Table
Spo121550.66Barchart | Table
Spo235890.66Barchart | Table
Spo238860.66Barchart | Table
Spo171230.66Barchart | Table
Spo086800.66Barchart | Table
Spo173860.66Barchart | Table
Spo174900.66Barchart | Table
Spo175470.66Barchart | Table
Spo067550.66Barchart | Table
Spo211320.66Barchart | Table
Spo066810.66Barchart | Table
Spo233200.66Barchart | Table
Spo065220.66Barchart | Table
Spo059680.66Barchart | Table
Spo104210.66Barchart | Table
Spo110150.66Barchart | Table
Spo097540.65Barchart | Table
Spo132450.65Barchart | Table
Spo030490.65Barchart | Table
Spo070790.65Barchart | Table
Spo226920.65Barchart | Table