Spo03448 (gene)

Overview
NameSpo03448
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_02301 : 10281 .. 11276 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATCATCAAAACAGGCTTATCTTTCTCTGTTGGTTTTAATACTTACCTCATCCCTTTTTCTCTTTTCTGCTGCAAGACCGTTACCAGAGGACAAGAAAACTGACAATTCAAATGGTAAAGGTACATATCCTAAGATAATAATATCAGGAGGTGGGTTCGGAAAAGGCTTTGGCTTCGGAAATGGGCGAGGTGGAGGAGGCGGAGGAGGGGGTGGTGGCCGCATGGAAATCCCCATCTTCTTCCCCATCCCTGGGTTTAGTATCCCTGGTTTTGGCATCCCTGGTTTCCCAGGCTTACCCCCTGTCCCTATTTTTCCTTATGCTGGTCCGGGTGGGGAATTTGGAGGCAGTGGAGGAGGTCAAGGTTGGGGTAAAGGTGGTTCAGAAGGAAGTGGAAACGGTCAAGGTTGGGGTAAAGGGGGTACAGGAGGAAGTGGAAGCGGTGAAGGTTGGGGTAGTGGAGATTCAGGAGGAAGTGGAAGCGGACAAGGTTGGGGTAGTGGTAGTTTTGGAGGAAGTGGGAGCGGAAAAGGTTGGGGTAGTGATGGTTCAGGTGCAGGTGGAGGGAGTGGTCAAGGTTGGGGTAGTGGTGGTTTAGGAGGAAGCGGAGGAGGTCAAGGTTGGGGTAAAAGTGGCACAGGAGGAAGTGGAAGCGGAGAAGATTGGGGTAGTAGTGGTTCAGGAGGAAGCGGAAGTGGACAAGGTTGGGGTGCTGGTAGTACAGGAGAAAGTGGGAGCGGATATGGAAGTGGTTCTGGAGAAGGTAATGGTTGGGGCGGCGGAGAGGTTAGCGTCGGAGGGGATCCTGATGAAGGTATCAACGTATATGGAGGGGGTGAAGGGTCGGACTGGGGTGGGGGCAATGGTTCGGGTGGCTTCCATGATCAACCTCCCTACTTTAACAATATGTTTGCTTCTGCTAGTAAACATATGGATGGCCATGAAACAGAATCAGAGGGAGGACCTGTACAAAGAAACATGAACGAGCCTTAA

mRNA sequence

ATGGCATCATCAAAACAGGCTTATCTTTCTCTGTTGGTTTTAATACTTACCTCATCCCTTTTTCTCTTTTCTGCTGCAAGACCGTTACCAGAGGACAAGAAAACTGACAATTCAAATGGTAAAGGTACATATCCTAAGATAATAATATCAGGAGGTGGGTTCGGAAAAGGCTTTGGCTTCGGAAATGGGCGAGGTGGAGGAGGCGGAGGAGGGGGTGGTGGCCGCATGGAAATCCCCATCTTCTTCCCCATCCCTGGGTTTAGTATCCCTGGTTTTGGCATCCCTGGTTTCCCAGGCTTACCCCCTGTCCCTATTTTTCCTTATGCTGGTCCGGGTGGGGAATTTGGAGGCAGTGGAGGAGGTCAAGGTTGGGGTAAAGGTGGTTCAGAAGGAAGTGGAAACGGTCAAGGTTGGGGTAAAGGGGGTACAGGAGGAAGTGGAAGCGGTGAAGGTTGGGGTAGTGGAGATTCAGGAGGAAGTGGAAGCGGACAAGGTTGGGGTAGTGGTAGTTTTGGAGGAAGTGGGAGCGGAAAAGGTTGGGGTAGTGATGGTTCAGGTGCAGGTGGAGGGAGTGGTCAAGGTTGGGGTAGTGGTGGTTTAGGAGGAAGCGGAGGAGGTCAAGGTTGGGGTAAAAGTGGCACAGGAGGAAGTGGAAGCGGAGAAGATTGGGGTAGTAGTGGTTCAGGAGGAAGCGGAAGTGGACAAGGTTGGGGTGCTGGTAGTACAGGAGAAAGTGGGAGCGGATATGGAAGTGGTTCTGGAGAAGGTAATGGTTGGGGCGGCGGAGAGGTTAGCGTCGGAGGGGATCCTGATGAAGGTATCAACGTATATGGAGGGGGTGAAGGGTCGGACTGGGGTGGGGGCAATGGTTCGGGTGGCTTCCATGATCAACCTCCCTACTTTAACAATATGTTTGCTTCTGCTAGTAAACATATGGATGGCCATGAAACAGAATCAGAGGGAGGACCTGTACAAAGAAACATGAACGAGCCTTAA

Coding sequence (CDS)

ATGGCATCATCAAAACAGGCTTATCTTTCTCTGTTGGTTTTAATACTTACCTCATCCCTTTTTCTCTTTTCTGCTGCAAGACCGTTACCAGAGGACAAGAAAACTGACAATTCAAATGGTAAAGGTACATATCCTAAGATAATAATATCAGGAGGTGGGTTCGGAAAAGGCTTTGGCTTCGGAAATGGGCGAGGTGGAGGAGGCGGAGGAGGGGGTGGTGGCCGCATGGAAATCCCCATCTTCTTCCCCATCCCTGGGTTTAGTATCCCTGGTTTTGGCATCCCTGGTTTCCCAGGCTTACCCCCTGTCCCTATTTTTCCTTATGCTGGTCCGGGTGGGGAATTTGGAGGCAGTGGAGGAGGTCAAGGTTGGGGTAAAGGTGGTTCAGAAGGAAGTGGAAACGGTCAAGGTTGGGGTAAAGGGGGTACAGGAGGAAGTGGAAGCGGTGAAGGTTGGGGTAGTGGAGATTCAGGAGGAAGTGGAAGCGGACAAGGTTGGGGTAGTGGTAGTTTTGGAGGAAGTGGGAGCGGAAAAGGTTGGGGTAGTGATGGTTCAGGTGCAGGTGGAGGGAGTGGTCAAGGTTGGGGTAGTGGTGGTTTAGGAGGAAGCGGAGGAGGTCAAGGTTGGGGTAAAAGTGGCACAGGAGGAAGTGGAAGCGGAGAAGATTGGGGTAGTAGTGGTTCAGGAGGAAGCGGAAGTGGACAAGGTTGGGGTGCTGGTAGTACAGGAGAAAGTGGGAGCGGATATGGAAGTGGTTCTGGAGAAGGTAATGGTTGGGGCGGCGGAGAGGTTAGCGTCGGAGGGGATCCTGATGAAGGTATCAACGTATATGGAGGGGGTGAAGGGTCGGACTGGGGTGGGGGCAATGGTTCGGGTGGCTTCCATGATCAACCTCCCTACTTTAACAATATGTTTGCTTCTGCTAGTAAACATATGGATGGCCATGAAACAGAATCAGAGGGAGGACCTGTACAAAGAAACATGAACGAGCCTTAA

Protein sequence

MASSKQAYLSLLVLILTSSLFLFSAARPLPEDKKTDNSNGKGTYPKIIISGGGFGKGFGFGNGRGGGGGGGGGGRMEIPIFFPIPGFSIPGFGIPGFPGLPPVPIFPYAGPGGEFGGSGGGQGWGKGGSEGSGNGQGWGKGGTGGSGSGEGWGSGDSGGSGSGQGWGSGSFGGSGSGKGWGSDGSGAGGGSGQGWGSGGLGGSGGGQGWGKSGTGGSGSGEDWGSSGSGGSGSGQGWGAGSTGESGSGYGSGSGEGNGWGGGEVSVGGDPDEGINVYGGGEGSDWGGGNGSGGFHDQPPYFNNMFASASKHMDGHETESEGGPVQRNMNEP
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo03448.1Spo03448.1mRNA


Homology
BLAST of Spo03448.1 vs. NCBI nr
Match: gi|902088773|gb|KNA03289.1| (hypothetical protein SOVF_210600 [Spinacia oleracea])

HSP 1 Score: 559.7 bits (1441), Expect = 3.400e-156
Identity = 331/331 (100.00%), Postives = 331/331 (100.00%), Query Frame = 1

		  

Query: 1   MASSKQAYLSLLVLILTSSLFLFSAARPLPEDKKTDNSNGKGTYPKIIISGGGFGKGFGF 60
           MASSKQAYLSLLVLILTSSLFLFSAARPLPEDKKTDNSNGKGTYPKIIISGGGFGKGFGF
Sbjct: 1   MASSKQAYLSLLVLILTSSLFLFSAARPLPEDKKTDNSNGKGTYPKIIISGGGFGKGFGF 60

Query: 61  GNGRGGGGGGGGGGRMEIPIFFPIPGFSIPGFGIPGFPGLPPVPIFPYAGPGGEFGGSGG 120
           GNGRGGGGGGGGGGRMEIPIFFPIPGFSIPGFGIPGFPGLPPVPIFPYAGPGGEFGGSGG
Sbjct: 61  GNGRGGGGGGGGGGRMEIPIFFPIPGFSIPGFGIPGFPGLPPVPIFPYAGPGGEFGGSGG 120

Query: 121 GQGWGKGGSEGSGNGQGWGKGGTGGSGSGEGWGSGDSGGSGSGQGWGSGSFGGSGSGKGW 180
           GQGWGKGGSEGSGNGQGWGKGGTGGSGSGEGWGSGDSGGSGSGQGWGSGSFGGSGSGKGW
Sbjct: 121 GQGWGKGGSEGSGNGQGWGKGGTGGSGSGEGWGSGDSGGSGSGQGWGSGSFGGSGSGKGW 180

Query: 181 GSDGSGAGGGSGQGWGSGGLGGSGGGQGWGKSGTGGSGSGEDWGSSGSGGSGSGQGWGAG 240
           GSDGSGAGGGSGQGWGSGGLGGSGGGQGWGKSGTGGSGSGEDWGSSGSGGSGSGQGWGAG
Sbjct: 181 GSDGSGAGGGSGQGWGSGGLGGSGGGQGWGKSGTGGSGSGEDWGSSGSGGSGSGQGWGAG 240

Query: 241 STGESGSGYGSGSGEGNGWGGGEVSVGGDPDEGINVYGGGEGSDWGGGNGSGGFHDQPPY 300
           STGESGSGYGSGSGEGNGWGGGEVSVGGDPDEGINVYGGGEGSDWGGGNGSGGFHDQPPY
Sbjct: 241 STGESGSGYGSGSGEGNGWGGGEVSVGGDPDEGINVYGGGEGSDWGGGNGSGGFHDQPPY 300

Query: 301 FNNMFASASKHMDGHETESEGGPVQRNMNEP 332
           FNNMFASASKHMDGHETESEGGPVQRNMNEP
Sbjct: 301 FNNMFASASKHMDGHETESEGGPVQRNMNEP 331

BLAST of Spo03448.1 vs. NCBI nr
Match: gi|731350760|ref|XP_010686670.1| (PREDICTED: glycine-rich protein DOT1-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 155.2 bits (391), Expect = 2.000e-34
Identity = 185/362 (51.10%), Postives = 208/362 (57.46%), Query Frame = 1

		  

Query: 1   MASSKQAYLSLLVLILTSSLFLFSAARPLPEDKKTDNSNGKGTYPKIIIS-GGGFGKGFG 60
           MA SK A LSL VLILTSSLF  +A R L EDK+ D SN K T  K +     GF +GFG
Sbjct: 1   MAPSKWASLSLFVLILTSSLFFCAAGRLLVEDKRADKSNNKDTSHKELSEIENGFREGFG 60

Query: 61  FGNGRGGGGGGGGGGRMEIPIFFPIPGFSIPGFGIPGFPGLPPVPIFPYAGP-GGEFGGS 120
            GNG  GGGGGG        + F +P   I GFGIP   G P + I  Y G  GGE  GS
Sbjct: 61  NGNGAAGGGGGG-------LLIFNLP---ILGFGIPRLSGFP-ITISAYGGAFGGE--GS 120

Query: 121 GGGQGWGKGG--SEGSGNGQGWGKGGTGGSGSG--EGWGSGDSGGSGSGQGWGSGSFGG- 180
           G GQGWG GG   EG G+GQGWG GG GG GSG  +GWGSG SGGSGSG+GWGSG  GG 
Sbjct: 121 GSGQGWGTGGFGGEGGGSGQGWGSGGFGGGGSGGGQGWGSGGSGGSGSGRGWGSGGSGGE 180

Query: 181 -SGSGKGWGSDGSGAGGGSGQGWGSGGLGGSGGGQGWGKSGTGGSGSGEDWGSSGSGGSG 240
            SGSG+GWGS GSG G GSG+GWGSGG GG           +GG G GE WG SGSGG G
Sbjct: 181 GSGSGQGWGSGGSGGGSGSGEGWGSGGYGGR----------SGGGGGGEGWG-SGSGGGG 240

Query: 241 SGQGWGAGSTGESGSGYGSGSGEGNGWGGGEVSVGGDPDEGINVY--GGGEGSDWGGGNG 300
            G+GWG GS G S        G G GW GG    GG   EG   Y  G G GS WG  +G
Sbjct: 241 GGEGWGRGSGGGS-------EGGGEGWSGG--GYGGGRGEGSGGYESGSGGGSGWGVDDG 300

Query: 301 -----SGGFHDQPPYFNNMFASAS--------------KHMDGHE---TESEGGPVQRNM 331
                +G    +PPYF+N+FASA+              K+   H+   TESEGGP  +  
Sbjct: 301 EHYPQAGNGLTEPPYFDNLFASATGGQLLDSQDSDRKKKNEHDHDIPGTESEGGPKNKER 329

BLAST of Spo03448.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q7S5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_210600 PE=4 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 2.400e-156
Identity = 331/331 (100.00%), Postives = 331/331 (100.00%), Query Frame = 1

		  

Query: 1   MASSKQAYLSLLVLILTSSLFLFSAARPLPEDKKTDNSNGKGTYPKIIISGGGFGKGFGF 60
           MASSKQAYLSLLVLILTSSLFLFSAARPLPEDKKTDNSNGKGTYPKIIISGGGFGKGFGF
Sbjct: 1   MASSKQAYLSLLVLILTSSLFLFSAARPLPEDKKTDNSNGKGTYPKIIISGGGFGKGFGF 60

Query: 61  GNGRGGGGGGGGGGRMEIPIFFPIPGFSIPGFGIPGFPGLPPVPIFPYAGPGGEFGGSGG 120
           GNGRGGGGGGGGGGRMEIPIFFPIPGFSIPGFGIPGFPGLPPVPIFPYAGPGGEFGGSGG
Sbjct: 61  GNGRGGGGGGGGGGRMEIPIFFPIPGFSIPGFGIPGFPGLPPVPIFPYAGPGGEFGGSGG 120

Query: 121 GQGWGKGGSEGSGNGQGWGKGGTGGSGSGEGWGSGDSGGSGSGQGWGSGSFGGSGSGKGW 180
           GQGWGKGGSEGSGNGQGWGKGGTGGSGSGEGWGSGDSGGSGSGQGWGSGSFGGSGSGKGW
Sbjct: 121 GQGWGKGGSEGSGNGQGWGKGGTGGSGSGEGWGSGDSGGSGSGQGWGSGSFGGSGSGKGW 180

Query: 181 GSDGSGAGGGSGQGWGSGGLGGSGGGQGWGKSGTGGSGSGEDWGSSGSGGSGSGQGWGAG 240
           GSDGSGAGGGSGQGWGSGGLGGSGGGQGWGKSGTGGSGSGEDWGSSGSGGSGSGQGWGAG
Sbjct: 181 GSDGSGAGGGSGQGWGSGGLGGSGGGQGWGKSGTGGSGSGEDWGSSGSGGSGSGQGWGAG 240

Query: 241 STGESGSGYGSGSGEGNGWGGGEVSVGGDPDEGINVYGGGEGSDWGGGNGSGGFHDQPPY 300
           STGESGSGYGSGSGEGNGWGGGEVSVGGDPDEGINVYGGGEGSDWGGGNGSGGFHDQPPY
Sbjct: 241 STGESGSGYGSGSGEGNGWGGGEVSVGGDPDEGINVYGGGEGSDWGGGNGSGGFHDQPPY 300

Query: 301 FNNMFASASKHMDGHETESEGGPVQRNMNEP 332
           FNNMFASASKHMDGHETESEGGPVQRNMNEP
Sbjct: 301 FNNMFASASKHMDGHETESEGGPVQRNMNEP 331

BLAST of Spo03448.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BRX5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g183360 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.400e-34
Identity = 185/362 (51.10%), Postives = 208/362 (57.46%), Query Frame = 1

		  

Query: 1   MASSKQAYLSLLVLILTSSLFLFSAARPLPEDKKTDNSNGKGTYPKIIIS-GGGFGKGFG 60
           MA SK A LSL VLILTSSLF  +A R L EDK+ D SN K T  K +     GF +GFG
Sbjct: 1   MAPSKWASLSLFVLILTSSLFFCAAGRLLVEDKRADKSNNKDTSHKELSEIENGFREGFG 60

Query: 61  FGNGRGGGGGGGGGGRMEIPIFFPIPGFSIPGFGIPGFPGLPPVPIFPYAGP-GGEFGGS 120
            GNG  GGGGGG        + F +P   I GFGIP   G P + I  Y G  GGE  GS
Sbjct: 61  NGNGAAGGGGGG-------LLIFNLP---ILGFGIPRLSGFP-ITISAYGGAFGGE--GS 120

Query: 121 GGGQGWGKGG--SEGSGNGQGWGKGGTGGSGSG--EGWGSGDSGGSGSGQGWGSGSFGG- 180
           G GQGWG GG   EG G+GQGWG GG GG GSG  +GWGSG SGGSGSG+GWGSG  GG 
Sbjct: 121 GSGQGWGTGGFGGEGGGSGQGWGSGGFGGGGSGGGQGWGSGGSGGSGSGRGWGSGGSGGE 180

Query: 181 -SGSGKGWGSDGSGAGGGSGQGWGSGGLGGSGGGQGWGKSGTGGSGSGEDWGSSGSGGSG 240
            SGSG+GWGS GSG G GSG+GWGSGG GG           +GG G GE WG SGSGG G
Sbjct: 181 GSGSGQGWGSGGSGGGSGSGEGWGSGGYGGR----------SGGGGGGEGWG-SGSGGGG 240

Query: 241 SGQGWGAGSTGESGSGYGSGSGEGNGWGGGEVSVGGDPDEGINVY--GGGEGSDWGGGNG 300
            G+GWG GS G S        G G GW GG    GG   EG   Y  G G GS WG  +G
Sbjct: 241 GGEGWGRGSGGGS-------EGGGEGWSGG--GYGGGRGEGSGGYESGSGGGSGWGVDDG 300

Query: 301 -----SGGFHDQPPYFNNMFASAS--------------KHMDGHE---TESEGGPVQRNM 331
                +G    +PPYF+N+FASA+              K+   H+   TESEGGP  +  
Sbjct: 301 EHYPQAGNGLTEPPYFDNLFASATGGQLLDSQDSDRKKKNEHDHDIPGTESEGGPKNKER 329

BLAST of Spo03448.1 vs. UniProtKB/TrEMBL
Match: A0A0F2N5S1_9DELT (Uncharacterized protein (Fragment) OS=Desulfobulbaceae bacterium BRH_c16a GN=VR65_27935 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 7.800e-6
Identity = 136/264 (51.52%), Postives = 144/264 (54.55%), Query Frame = 1

		  

Query: 36  DNSNGKGTYPKIIISG-GGFGKGFGFGNGRGGGGGGGGGGRMEIPIFFPIPGFSIPGFGI 95
           DN +G G Y     SG GG+G G G+G G G GGG G GG           G S  G G 
Sbjct: 10  DNYSGSGNYGDP--SGMGGYGGGSGYGGGSGYGGGSGYGGGSGSGSGSGYGGGSGYGGGH 69

Query: 96  PGFPGLPPVPIFPYAGPGGEFGGSGGGQGWGKGGSEGSGNGQGWGKGGTGGSGSGEGWGS 155
            G  G        Y G      GSG G G G GG  GSG G G G G   G GSG G GS
Sbjct: 70  DGDDG-------GYGGGSDSGSGSGSGGGSGSGGGSGSGGGSGSGGGSGSGGGSGSGGGS 129

Query: 156 GDSGGSGSG----QGWGSGSFGGSGSGKGWGSD-GSGAGGGSGQGWGSGGLGGSGGGQGW 215
           G  GGSGSG     G GSGS GGSGSG G GS  GSG+GGGSG G GSG  GGSG G G 
Sbjct: 130 GSGGGSGSGGGSGSGGGSGSGGGSGSGGGSGSGGGSGSGGGSGSGGGSGSGGGSGSGGGS 189

Query: 216 GKSGTGGSGSGEDWGSSGSGGSGSGQGWGAGSTGESGSGYGSGSGEGNGWGGGEVSVGGD 275
           G  G  GSG G   G     G GSG G G+GS G SGSG GSGSG G+G GGG  S GG 
Sbjct: 190 GSGGGSGSGGGSGSGGGSGSGGGSGSGGGSGSGGGSGSGGGSGSGGGSGSGGGSGSGGGS 249

Query: 276 PDEGINVYGGGEGSDWGGGNGSGG 294
              G +  GGG GS  GGG+GSGG
Sbjct: 250 GSGGGSGSGGGSGS--GGGSGSGG 262

The following BLAST results are available for this feature:
BLAST of Spo03448.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 2
Match NameE-valueIdentityDescription
gi|902088773|gb|KNA03289.1|3.4e-156100.hypothetical protein SOVF_2106... [more]
gi|731350760|ref|XP_010686670.1|2.0e-3451.1PREDICTED: glycine-rich protei... [more]
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BLAST of Spo03448.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 3
Match NameE-valueIdentityDescription
A0A0K9Q7S5_SPIOL2.4e-156100.Uncharacterized protein OS=Spi... [more]
A0A0J8BRX5_BETVU1.4e-3451.1Uncharacterized protein OS=Bet... [more]
A0A0F2N5S1_9DELT7.8e-651.5Uncharacterized protein (Fragm... [more]
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BLAST of Spo03448.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo03448.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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RNA-Seq Expression
   



Co-expression