Spo03623 (gene) | SpinachBase

Overview


Name	Spo03623
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	WGS project CBUC00000000 data, cultivar Chinese Spring, contig v443_1547
Location	chr2 : 566656 .. 570498 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATATTTTAGAAGTGTTCCATGAATCAATTTTTGAACTATCATGTACATTTCTTTTTGCTATCTGACGGAAAAGTTGTGTTAAAATGCTCAATTACCAGGTGCCTTTTGGGTACAGCAGGAAGGATGTGCTGCTGATTGGGTTAGGAGTAACTGCTTTTGGAGTGGGATTGAAGAGTGGATTGGAGGTATCCTAACCTTTGATTAATTCCATAAGATTTTCATTTCATTGTTGGTTTGCAACTTTGCGCATTCTACTAAGGAATCCATTGTATATTTTCTTCTCAAATGTTTTGACTTTTGAGATTTCTGTTGCAATTGAAGATATTCTTTCTACATACAAAGTTAATTAGTTGTATGTAAATCTGTCTAAGAAAGTTAACCTAACCAGAATGACTGACCCAAAACCAACTTTTTTTGATGAAAAGGGTGACCTGTGAATTGTACCCGGAAGGAAGTTGATCTGAGCATAACCCAGTTAATAATAAAAGGCCAAAGATAGAAAACAAGATCAATATATCTAGTTTTAGTTCTTTGTACAAATTTGTTACATCAGTAAGTTATTAGCTTATGTTATGGTCTTATAAATTTGTCTCACAATTGTGTTCTGCGCAGTTTGTTGGAGTTGATCCATTACAAGCAGGAAATGTGGTTCAGCTACTTGTAGTCTTAGGCATGACAGTTGGATGGATTTCGTCCTATATGATTCGGGTTGCAAGTAAAGACATGACATACGCTAAGCAGTTGCGAGACTACGAGGGCAAAGTGATGGAGGTAGGCTTTATGCAGTTATGCTATGTTAACCTTTCTTGAATTTCCGCGTCTTTTTCTGAAGCAAGGCCAATCCTTCTATCCAATATTAATCCCACATTTGAATTATTAGAAATAATTATTTTTGTGGTTCCTGGACTCCTGGCATAGAGCCGGAACATCCTTTGGATTAGATCACCTTATCGTGCAGTTCTTTCTCGCTTTGGCTTCCATTTTTGGATGATTTCATGATTATATAAAGGATCCCACCTATGATATTTTAGGACCATGATTAGTCTTGTGAAATTCCCTAAACCACTCTCTAGTCCTAGTCCTTTTCCACATCAGTGATTTATAAGAAAACCAATGTGAAAAATGAAAATATGATAGTCAGAAAACATTGTTATCTTGAGGAAAGTTTAGTAACAGCCATTAGAAGACATATTAGGTAATGTTTGGTTGATAAAGTTCCTAGGAATAAGATTTTCCCATGTATTAACATTTCCTAGGAAGTACTAAATGTTGTTTGGTTGAACATTAGAAGTAACTTCCCATGGGAAGTTCCACTTACCTAGGGGGCCTAGGTAAGCAACTTCCTCCTTTTTAGAGCAACTTCCTCCATTTCATGGGAAGTAGAAGTTCCTAGGAGGTGTGACTTCCCATGTTTTCGCAAACCAAACAACACTACAACCTTCCACTTCCTAGAAAACTACACTTTCTATGGGGTCGTTTGGTTGATCGTGGGAAGTAGAACTTCCTAAGAAGAAGTTTTCCCATGCATAAGCATTTCCTAGGAATTGCGTGATGTTGTTTGGTTAAACATGAGAATTTACTTCCCATGTGATGTTCAACTTACCTAGGGGAACCTAGGTAAGCAACTTCCTCCATTTTGTAGGAAGTGGAAATTCCCAAAAAGTGTGACATCTTATGTTTTTGTCAACCAAACAATTCTACAATCGTCCATTTCCTAGGAAATCATATTTCCCATGGTTTTTCATGTTAACCAAACATCACCTATGATTTTTCATGTCGACCAAACAACACCTTCAATAATTTGGTCGTTATATATCATATACACGCCGTCTTCAGATGTGGACAATTTCAGACCTTAAGGTCTGGTCATTCAGGGTTCTTTCTTGATATGATACAATTCTTAGTTGCTACTCTGAAAGTCCGTATCTGTTCGTGAATTAGACAGGCCTTCACTTTCTTAATTGTGATCTAATTGTAGCCCTACCCTAATTATATCTGTAAGTGTGAGAAAGATAAGTACCAACTTAATACAAGTACCTCTTTGGGACCTCTTATCCTTTCTTTCTTGTTCAGTTCCTAAGCATTGATGTCTCTAATAAACATTCTGTCTCTTTCTGGCTCACTTGTAAGTAAACCATGTAATGTCCAATATGATATGTTTAACTCCAGCAGATCACCTTCTTCCTTAAAACAAGATTACGAAGCAAAGTGCCCTTGATTTAAACACCTTTTTTTTTTTGGTTACTATTCGACTTATTTTGTCTGAACTTATATGAACTTAAGCTCTATTCTGTTTTGTTCGACTTATTTGTTCATATAAGTTCAGATAAGTTCATATAATATAATAAGTTCAGCAAAAATAAGTTTTTTTCAGACATTTTCACACACAAATAAGTTTATTTCAGACAAAATAAGTATTTTTTCAGATAAAATAAGTTAAGATCAGTTCAGTTAAGTTTAGATAAGTTCAAATAATATAAGTTCGGTCAAAATAAGTCCAATAGAACGGAGCCTTAACTGAACTCATTTTATCTGAAAATACTTATTTTGTCATTTTGTCCGAAATAAACTTATTTGTGTGTGAAAATGTCTGAATGTTTTCTAAACTTATACTTCCTCCGATTTTTAATACTCGCAACGTTTGGGGTATTTTACACTATTCACATATTCTATTTTGACTATTATTGGTGACTTATACGTAAGATAAAACATAATCATGCAGAATCTTGTTAGATTCGTCTCAATTTGTATTTTCAAAATATTAACTTTTTATAATTTTTGCTTAAATAAAATTAAAGATATTAATGATCAAAGTTTTGCATAGGCATTCGTGAAAGTTACCAACGTTGCAAGTATTAAAAATTGGAGGAAGTATTATCTGAATTTAACTGAACTTATCTGAACTTATTTTGTCAAAAATAAGTCGAACAGAAACAGAGATCCATTGCGCGAGATTCTTTTTCCAGTCACTGCTTGCATCTCTATCTAATGCAGTTGTTTTTAACAAAGTTTGATAGTTAGGTTATTTTTACAGAGTACTCCATATATTCTTATACTAGTTGGTTTATTTTTGTTGCACCGTCTATAACCAGGTTCATCAGCATATAATCCCTTTATTCTTTAATGTATTATCCTTTTCATTTTGCAGAAACGATTGGAAGGCCTTACTGAAGCAGAAATTCAAGTTTTAATCGAGCAAGTCGAAGAAGAGAAAAGAGTTGCAAGCCTTGCAGCTAACAACAGACCCAACAGTGAGCAGGTTAATTAGCTTAAAACATGGTTTCTGGTAAGAAAATACTATAGTTTGTGATCAAGAAAAGTTGTGTATAGTATGGTGTATAATGTATATGGGAGGCTTTGTGACTATACAAATTACTAATTGTGACAATCACAACGTTTGCCAAAGTCTTAGTTTTGTACATTATTGGTCAGGTTGTATCTTATTTACATAAACGGTGTGTTACGTTACAGTTCAAACATACGATACAACTCAAAAACGTAGAAAATACGAAGTATGTGAAATTAAGTCTGAAAGACCTCTAATACACAAGGTGTACGATAAATTTATTGTATATTGAGGTAATTTTTACTAAGTTTTTTGGTAATTGTAACGTGTTTGTCGGAACAATTACAAAATTGTGATTATACTTTTAAAAAAAATGTCGGTTATAAAACTAAGAGATCCTTATTAGCATTATTAGCCAGAAAGGACAACAATATTTGTCCTTTGAGGACACAAGGGGAATACTTTGTCACTACTGTATGTAGCAATGTGATATTGCATTGTAAACTTGTGAACTTGTCTTTGGTTTTTTTTTTTTTTAAATGCGTCATTTGTATAG

mRNA sequence

GATATTTTAGAAGTGTTCCATGAATCAATTTTTGAACTATCATGTACATTTCTTTTTGCTATCTGACGGAAAAGTTGTGTTAAAATGCTCAATTACCAGGTGCCTTTTGGGTACAGCAGGAAGGATGTGCTGCTGATTGGGTTAGGAGTAACTGCTTTTGGAGTGGGATTGAAGAGTGGATTGGAGTTTGTTGGAGTTGATCCATTACAAGCAGGAAATGTGGTTCAGCTACTTGTAGTCTTAGGCATGACAGTTGGATGGATTTCGTCCTATATGATTCGGGTTGCAAGTAAAGACATGACATACGCTAAGCAGTTGCGAGACTACGAGGGCAAAGTGATGGAGAAACGATTGGAAGGCCTTACTGAAGCAGAAATTCAAGTTTTAATCGAGCAAGTCGAAGAAGAGAAAAGAGTTGCAAGCCTTGCAGCTAACAACAGACCCAACAGTGAGCAGGTTAATTAGCTTAAAACATGGTTTCTGGTAAGAAAATACTATAGTTTGTGATCAAGAAAAGTTGTGTATAGTATGGTGTATAATGTATATGGGAGGCTTTGTGACTATACAAATTACTAATTGTGACAATCACAACGTTTGCCAAAGTCTTAGTTTTGTACATTATTGGTCAGGTTGTATCTTATTTACATAAACGGTGTGTTACGTTACAGTTCAAACATACGATACAACTCAAAAACGTAGAAAATACGAAGTATGTGAAATTAAGTCTGAAAGACCTCTAATACACAAGGTGTACGATAAATTTATTGTATATTGAGGTAATTTTTACTAAGTTTTTTGGTAATTGTAACGTGTTTGTCGGAACAATTACAAAATTGTGATTATACTTTTAAAAAAAATGTCGGTTATAAAACTAAGAGATCCTTATTAGCATTATTAGCCAGAAAGGACAACAATATTTGTCCTTTGAGGACACAAGGGGAATACTTTGTCACTACTGTATGTAGCAATGTGATATTGCATTGTAAACTTGTGAACTTGTCTTTGGTTTTTTTTTTTTTTAAATGCGTCATTTGTATAG

Coding sequence (CDS)

ATGCTCAATTACCAGGTGCCTTTTGGGTACAGCAGGAAGGATGTGCTGCTGATTGGGTTAGGAGTAACTGCTTTTGGAGTGGGATTGAAGAGTGGATTGGAGTTTGTTGGAGTTGATCCATTACAAGCAGGAAATGTGGTTCAGCTACTTGTAGTCTTAGGCATGACAGTTGGATGGATTTCGTCCTATATGATTCGGGTTGCAAGTAAAGACATGACATACGCTAAGCAGTTGCGAGACTACGAGGGCAAAGTGATGGAGAAACGATTGGAAGGCCTTACTGAAGCAGAAATTCAAGTTTTAATCGAGCAAGTCGAAGAAGAGAAAAGAGTTGCAAGCCTTGCAGCTAACAACAGACCCAACAGTGAGCAGGTTAATTAG

Protein sequence

MLNYQVPFGYSRKDVLLIGLGVTAFGVGLKSGLEFVGVDPLQAGNVVQLLVVLGMTVGWISSYMIRVASKDMTYAKQLRDYEGKVMEKRLEGLTEAEIQVLIEQVEEEKRVASLAANNRPNSEQVN

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo03623.1	Spo03623.1	mRNA

Homology

[Close]

BLAST of Spo03623.1 vs. NCBI nr
Match: gi|902180720|gb|KNA09605.1| (hypothetical protein SOVF_151840 [Spinacia oleracea])

HSP 1 Score: 229.2 bits (583), Expect = 4.100e-57
Identity = 121/122 (99.18%), Postives = 122/122 (100.00%), Query Frame = 1


		  
Query: 5   QVPFGYSRKDVLLIGLGVTAFGVGLKSGLEFVGVDPLQAGNVVQLLVVLGMTVGWISSYM 64
           +VPFGYSRKDVLLIGLGVTAFGVGLKSGLEFVGVDPLQAGNVVQLLVVLGMTVGWISSYM
Sbjct: 89  KVPFGYSRKDVLLIGLGVTAFGVGLKSGLEFVGVDPLQAGNVVQLLVVLGMTVGWISSYM 148

Query: 65  IRVASKDMTYAKQLRDYEGKVMEKRLEGLTEAEIQVLIEQVEEEKRVASLAANNRPNSEQ 124
           IRVASKDMTYAKQLRDYEGKVMEKRLEGLTEAEIQVLIEQVEEEKRVASLAANNRPNSEQ
Sbjct: 149 IRVASKDMTYAKQLRDYEGKVMEKRLEGLTEAEIQVLIEQVEEEKRVASLAANNRPNSEQ 208

Query: 125 VN 127
           VN
Sbjct: 209 VN 210

[Close]

BLAST of Spo03623.1 vs. NCBI nr
Match: gi|731369463|ref|XP_010696560.1| (PREDICTED: uncharacterized protein LOC104909071 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 177.9 bits (450), Expect = 1.100e-41
Identity = 95/119 (79.83%), Postives = 104/119 (87.39%), Query Frame = 1


		  
Query: 8   FGYSRKDVLLIGLGVTAFGVGLKSGLEFVGVDPLQAGNVVQLLVVLGMTVGWISSYMIRV 67
           FGY+RKDVLLIGLGVT FGV LKSGLEF GVDPLQAGNVVQLLVVLGMT+GWI SYM+RV
Sbjct: 96  FGYNRKDVLLIGLGVTFFGVALKSGLEFFGVDPLQAGNVVQLLVVLGMTIGWILSYMVRV 155

Query: 68  ASKDMTYAKQLRDYEGKVMEKRLEGLTEAEIQVLIEQVEEEKRVASLAANNRPNSEQVN 127
           A+KDMTYA+QLRDYE KVMEKRLEGLTEAE+QVL+EQVEEEKR  +       N +QVN
Sbjct: 156 ANKDMTYAQQLRDYESKVMEKRLEGLTEAELQVLLEQVEEEKRSVA-------NRKQVN 207

[Close]

BLAST of Spo03623.1 vs. NCBI nr
Match: gi|695051840|ref|XP_009413961.1| (PREDICTED: uncharacterized protein LOC103995162 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 177.2 bits (448), Expect = 1.800e-41
Identity = 88/106 (83.02%), Postives = 99/106 (93.40%), Query Frame = 1


		  
Query: 5   QVPFGYSRKDVLLIGLGVTAFGVGLKSGLEFVGVDPLQAGNVVQLLVVLGMTVGWISSYM 64
           +VPFGY+RKDVLLIGLGVT  G+GLKSGLEF GVDPLQAGNVVQL +VLG+TVGWIS+YM
Sbjct: 89  EVPFGYTRKDVLLIGLGVTLAGIGLKSGLEFAGVDPLQAGNVVQLFIVLGLTVGWISTYM 148

Query: 65  IRVASKDMTYAKQLRDYEGKVMEKRLEGLTEAEIQVLIEQVEEEKR 111
            RVA+KDMTYA+QLRDYE KVMEKRLEGLTEAE++ L+EQVEEEKR
Sbjct: 149 FRVANKDMTYAQQLRDYEKKVMEKRLEGLTEAELEALLEQVEEEKR 194

[Close]

BLAST of Spo03623.1 vs. NCBI nr
Match: gi|242059007|ref|XP_002458649.1| (hypothetical protein SORBIDRAFT_03g037410 [Sorghum bicolor])

HSP 1 Score: 174.5 bits (441), Expect = 1.200e-40
Identity = 89/106 (83.96%), Postives = 98/106 (92.45%), Query Frame = 1


		  
Query: 5   QVPFGYSRKDVLLIGLGVTAFGVGLKSGLEFVGVDPLQAGNVVQLLVVLGMTVGWISSYM 64
           + PFGY+RKDVLLIGLGVTAFGVGLK GLE +GVDPLQAGNVVQLLVVLGMTVGWIS+YM
Sbjct: 78  KAPFGYTRKDVLLIGLGVTAFGVGLKYGLELLGVDPLQAGNVVQLLVVLGMTVGWISTYM 137

Query: 65  IRVASKDMTYAKQLRDYEGKVMEKRLEGLTEAEIQVLIEQVEEEKR 111
            RVA+KDMTYA QLRDYE +VMEKRLE LTEAE+Q L+EQVEEEK+
Sbjct: 138 FRVANKDMTYAHQLRDYEKQVMEKRLESLTEAELQALLEQVEEEKQ 183

[Close]

BLAST of Spo03623.1 vs. NCBI nr
Match: gi|731426675|ref|XP_010663693.1| (PREDICTED: uncharacterized protein LOC100245848 [Vitis vinifera])

HSP 1 Score: 174.5 bits (441), Expect = 1.200e-40
Identity = 84/106 (79.25%), Postives = 102/106 (96.23%), Query Frame = 1


		  
Query: 5   QVPFGYSRKDVLLIGLGVTAFGVGLKSGLEFVGVDPLQAGNVVQLLVVLGMTVGWISSYM 64
           +VPFGY+RKDVLLIG+GVT  G+GLKSGLEFVGVDPLQAGNVVQL++VLG+T+GWIS+Y+
Sbjct: 96  KVPFGYNRKDVLLIGVGVTVLGIGLKSGLEFVGVDPLQAGNVVQLVLVLGLTIGWISTYI 155

Query: 65  IRVASKDMTYAKQLRDYEGKVMEKRLEGLTEAEIQVLIEQVEEEKR 111
            RV++K+MTYA+QLRDYE KVM+KRLEGLTEAE++VL+EQVEEEKR
Sbjct: 156 FRVSNKEMTYAQQLRDYENKVMQKRLEGLTEAELEVLLEQVEEEKR 201

[Close]

BLAST of Spo03623.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QQX5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_151840 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 2.800e-57
Identity = 121/122 (99.18%), Postives = 122/122 (100.00%), Query Frame = 1


		  
Query: 5   QVPFGYSRKDVLLIGLGVTAFGVGLKSGLEFVGVDPLQAGNVVQLLVVLGMTVGWISSYM 64
           +VPFGYSRKDVLLIGLGVTAFGVGLKSGLEFVGVDPLQAGNVVQLLVVLGMTVGWISSYM
Sbjct: 89  KVPFGYSRKDVLLIGLGVTAFGVGLKSGLEFVGVDPLQAGNVVQLLVVLGMTVGWISSYM 148

Query: 65  IRVASKDMTYAKQLRDYEGKVMEKRLEGLTEAEIQVLIEQVEEEKRVASLAANNRPNSEQ 124
           IRVASKDMTYAKQLRDYEGKVMEKRLEGLTEAEIQVLIEQVEEEKRVASLAANNRPNSEQ
Sbjct: 149 IRVASKDMTYAKQLRDYEGKVMEKRLEGLTEAEIQVLIEQVEEEKRVASLAANNRPNSEQ 208

Query: 125 VN 127
           VN
Sbjct: 209 VN 210

[Close]

BLAST of Spo03623.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BAC1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g199430 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 7.500e-42
Identity = 95/119 (79.83%), Postives = 104/119 (87.39%), Query Frame = 1


		  
Query: 8   FGYSRKDVLLIGLGVTAFGVGLKSGLEFVGVDPLQAGNVVQLLVVLGMTVGWISSYMIRV 67
           FGY+RKDVLLIGLGVT FGV LKSGLEF GVDPLQAGNVVQLLVVLGMT+GWI SYM+RV
Sbjct: 96  FGYNRKDVLLIGLGVTFFGVALKSGLEFFGVDPLQAGNVVQLLVVLGMTIGWILSYMVRV 155

Query: 68  ASKDMTYAKQLRDYEGKVMEKRLEGLTEAEIQVLIEQVEEEKRVASLAANNRPNSEQVN 127
           A+KDMTYA+QLRDYE KVMEKRLEGLTEAE+QVL+EQVEEEKR  +       N +QVN
Sbjct: 156 ANKDMTYAQQLRDYESKVMEKRLEGLTEAELQVLLEQVEEEKRSVA-------NRKQVN 207

[Close]

BLAST of Spo03623.1 vs. UniProtKB/TrEMBL
Match: M0TT47_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.300e-41
Identity = 88/106 (83.02%), Postives = 99/106 (93.40%), Query Frame = 1


		  
Query: 5   QVPFGYSRKDVLLIGLGVTAFGVGLKSGLEFVGVDPLQAGNVVQLLVVLGMTVGWISSYM 64
           +VPFGY+RKDVLLIGLGVT  G+GLKSGLEF GVDPLQAGNVVQL +VLG+TVGWIS+YM
Sbjct: 89  EVPFGYTRKDVLLIGLGVTLAGIGLKSGLEFAGVDPLQAGNVVQLFIVLGLTVGWISTYM 148

Query: 65  IRVASKDMTYAKQLRDYEGKVMEKRLEGLTEAEIQVLIEQVEEEKR 111
            RVA+KDMTYA+QLRDYE KVMEKRLEGLTEAE++ L+EQVEEEKR
Sbjct: 149 FRVANKDMTYAQQLRDYEKKVMEKRLEGLTEAELEALLEQVEEEKR 194

[Close]

BLAST of Spo03623.1 vs. UniProtKB/TrEMBL
Match: D7SJD3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g02160 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 8.300e-41
Identity = 84/106 (79.25%), Postives = 102/106 (96.23%), Query Frame = 1


		  
Query: 5   QVPFGYSRKDVLLIGLGVTAFGVGLKSGLEFVGVDPLQAGNVVQLLVVLGMTVGWISSYM 64
           +VPFGY+RKDVLLIG+GVT  G+GLKSGLEFVGVDPLQAGNVVQL++VLG+T+GWIS+Y+
Sbjct: 96  KVPFGYNRKDVLLIGVGVTVLGIGLKSGLEFVGVDPLQAGNVVQLVLVLGLTIGWISTYI 155

Query: 65  IRVASKDMTYAKQLRDYEGKVMEKRLEGLTEAEIQVLIEQVEEEKR 111
            RV++K+MTYA+QLRDYE KVM+KRLEGLTEAE++VL+EQVEEEKR
Sbjct: 156 FRVSNKEMTYAQQLRDYENKVMQKRLEGLTEAELEVLLEQVEEEKR 201

[Close]

BLAST of Spo03623.1 vs. UniProtKB/TrEMBL
Match: C5XMI5_SORBI (Putative uncharacterized protein Sb03g037410 OS=Sorghum bicolor GN=Sb03g037410 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 8.300e-41
Identity = 89/106 (83.96%), Postives = 98/106 (92.45%), Query Frame = 1


		  
Query: 5   QVPFGYSRKDVLLIGLGVTAFGVGLKSGLEFVGVDPLQAGNVVQLLVVLGMTVGWISSYM 64
           + PFGY+RKDVLLIGLGVTAFGVGLK GLE +GVDPLQAGNVVQLLVVLGMTVGWIS+YM
Sbjct: 78  KAPFGYTRKDVLLIGLGVTAFGVGLKYGLELLGVDPLQAGNVVQLLVVLGMTVGWISTYM 137

Query: 65  IRVASKDMTYAKQLRDYEGKVMEKRLEGLTEAEIQVLIEQVEEEKR 111
            RVA+KDMTYA QLRDYE +VMEKRLE LTEAE+Q L+EQVEEEK+
Sbjct: 138 FRVANKDMTYAHQLRDYEKQVMEKRLESLTEAELQALLEQVEEEKQ 183

[Close]

BLAST of Spo03623.1 vs. TAIR (Arabidopsis)
Match: AT3G17930.1 (unknown protein)

HSP 1 Score: 155.6 bits (392), Expect = 2.000e-38
Identity = 73/103 (70.87%), Postives = 95/103 (92.23%), Query Frame = 1


		  
Query: 7   PFGYSRKDVLLIGLGVTAFGVGLKSGLEFVGVDPLQAGNVVQLLVVLGMTVGWISSYMIR 66
           PFGY+RKDV+LIG+GVTA G+GL+SGLE+VGVDPLQAGN VQL++VLG+T+GWIS+Y+ R
Sbjct: 84  PFGYTRKDVILIGVGVTALGIGLESGLEYVGVDPLQAGNAVQLILVLGLTLGWISTYIFR 143

Query: 67  VASKDMTYAKQLRDYEGKVMEKRLEGLTEAEIQVLIEQVEEEK 110
           V +K+MTYA+QLRDYE +VM+KRLE L+EAE++ L+ QV+EEK
Sbjct: 144 VGNKEMTYAQQLRDYESQVMQKRLESLSEAELEALMAQVDEEK 186

The following BLAST results are available for this feature:

BLAST of Spo03623.1 vs. NCBI nr
BLAST of Spo03623.1 vs. UniProtKB/TrEMBL
BLAST of Spo03623.1 vs. ExPASy Swiss-Prot
BLAST of Spo03623.1 vs. TAIR (Arabidopsis)

BLAST of Spo03623.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902180720\|gb\|KNA09605.1\|	4.1e-57	99.1	hypothetical protein SOVF_1518...	[more]
gi\|731369463\|ref\|XP_010696560.1\|	1.1e-41	79.8	PREDICTED: uncharacterized pro...	[more]
gi\|695051840\|ref\|XP_009413961.1\|	1.8e-41	83.0	PREDICTED: uncharacterized pro...	[more]
gi\|242059007\|ref\|XP_002458649.1\|	1.2e-40	83.9	hypothetical protein SORBIDRAF...	[more]
gi\|731426675\|ref\|XP_010663693.1\|	1.2e-40	79.2	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo03623.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QQX5_SPIOL	2.8e-57	99.1	Uncharacterized protein OS=Spi...	[more]
A0A0J8BAC1_BETVU	7.5e-42	79.8	Uncharacterized protein OS=Bet...	[more]
M0TT47_MUSAM	1.3e-41	83.0	Uncharacterized protein OS=Mus...	[more]
D7SJD3_VITVI	8.3e-41	79.2	Putative uncharacterized prote...	[more]
C5XMI5_SORBI	8.3e-41	83.9	Putative uncharacterized prote...	[more]

BLAST of Spo03623.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo03623.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT3G17930.1	2.0e-38	70.8	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021562	Protein of unknown function DUF3007	PFAM	PF11460	DUF3007	coord: 11..106 score: 6.1
None	No IPR available	PANTHER	PTHR35734	FAMILY NOT NAMED	coord: 3..124 score: 2.8
None	No IPR available	PANTHER	PTHR35734:SF1	SUBFAMILY NOT NAMED	coord: 3..124 score: 2.8

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009902	chloroplast relocation
biological_process	GO:0010190	cytochrome b6f complex assembly
biological_process	GO:0000023	maltose metabolic process
biological_process	GO:0034660	ncRNA metabolic process
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0043085	positive regulation of catalytic activity
biological_process	GO:0019252	starch biosynthetic process
biological_process	GO:0010027	thylakoid membrane organization
cellular_component	GO:0009535	chloroplast thylakoid membrane
molecular_function	GO:0005525	GTP binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo01928	0.71	Barchart \| Table
Spo05901	0.68	Barchart \| Table
Spo26975	0.65	Barchart \| Table