Spo03715 (gene) | SpinachBase

Overview


Name	Spo03715
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Actin depolymerizing factor 6
Location	SpoScf_00131 : 759368 .. 762591 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGATTTCAATCAAATTGTTGCCGACCCACTTTAATTTTGTTGTGTGTACTACTTTTTCTTCTTCGTTTGCTCCATAACTTATCTCTCTCTCATAATCTCATCCCCTTAAATTTTGAAATTTGTACTTTCGACATTATATTCACCCACTTCTCTTCGCTGCAAAACTAAGCAACTATGGCTTTCAGAGGGGTATGCTTATTTTCCCAATTTTAAATTATCTTTTCAAATTTATGCATATATTATACTCTGCATGTTTCAAATTTGTGATCTGATCACTGTTATATTCAATCAATCATGCTTCTTTATTGTTATTTATTCTGTGATTGATTTTAAAGTCTGAGTTTTTTTCCTATGGGTGTCTTGATTTGCATGAGTTTACTGTTCAAATGGCGAAATGGATTTCTTAATTTTTGTTGGAGAATTACACTCTGTGATATCTTTGTTCGTACTAGTGAAAACTATGAACAGTTGATATTTCGAGACCAATCTTACAAGATCGCACACGCCCATGTGATTATGTTTTTTCTTATAGTGAGTGAATTGGTGAGAATTCGTGGTTAAAGGTTTTTGATCTTTGTATTTCGAGACCATTCTTACAAGATCTCACATGACTACGTGAGTATGGTTTTCCTATAGAGACTGTATCGTGAGAATTCCTGGTCAAAGATTTTGATCTTCGTAGTTCTCTAATACATTCTCCATAGGAACATCTAAATATAGTTTGATTTACTCACAACACTTTGTTATTTAAAAACTTAATTGGGTTACTATTAAAAAGCATAATATGTTTTGATATAGTTGAAGTTAGAATGGTTTACATTATTACAATCCCTTAGATTATGAGTTATGACCCTCATTTCAATTATGATTCTTTGCTTTTCGGGTTTGGGTTCTATTTGACTCCTTGTAGTGTTAATGTCATCTTTTGCTACACCACATGGAATTCAAATCAATATATCTTGCTATGAGAATTACACGGTATGATTTTTTGGCCTTATATTAAAATGGCGGATCTTCCCTTTGCCTTGGTTGGCCCCGACCCCCCAGCGGAAATTTCCGTAGTTTATTTTTAGTTACACCCCCTAAAATTTGGGTAAAGTTGTATAAATTACATACTATATTGCTTAACTCTTTATTGACCCCTAGTAAAACTGTTTAAGATCCGCCACTCCTAGCTATTCACCGGATAAATGCTCGTGCTCCTGGATGGAGCTTATTTTGCCATTTGGATTTAGAGTGGTTCCATATATAGGTCATACGTAGCACGCATTATTCATGTTCTATACCGATGACTACGTAGATTTCACACACATACTATGTCGAACACTGATATGATTGCTTGAATAAGTGTAGAGGTTAATTGTAATTCATTGTCTAGAATTGTATGAGAAAATGAATAACTTCAAATTGGTTTTACCTTGCAGAGGAATGCACAATCTGGTATAGGAGTTGGTGAGCACACCAAAAACACATTTACGGAATTGCAAAGGAAGAAGGTGCACCGTTATGTGGTGTTTAAGATTGATGAGAAAAAGAAGGAAGTAGTTGTGGAAAAGACCGGAGGACCTTCAGAAAGTTATGATGATTTTCTTGCATCGTTGCCTGAGAATGATTGCCGCTATGCAGTTTATGATTACGACTATGTGACCTCCGAGAACTGCCAGAAGAGCAAAATCTTTTTTGTTGCATGGTTAGTTTATTTTACACTACTATGTCCTGCTAGTAGATTTTCAATTTTCAATTTTCAATTTTCAATGAACTCCTCTTTCTAATATACGTATATGTTTATCCTCAGTACGTAATTGGAGGTTGTCGCATGTTGATGTCAGATAGACAGATACTAAGATCTGATCCGAGCATATTTAATCGCAGTATTATCATTTCGTTATGTTACAACAGGATTTAGTTAGTCATTATTTGGTCCAGTAGTCGTACTAATCTTTAGTGGCTCTGTATATCATTTGAAGTTTTGAACAATGCATTTCAACTTGTTGTATGTCTTGATATGCAAGTGAACTTTGGCTGGTTGAGTGGCCGGATTAGCGAGTTGTGTAGGTCATTGTTGCTGCTGTCAGCTAGCAGTATTACTCTTCTGTAGACCTGATCAAAAGGCAGGCCGGGCCGTGCCAGACCACGGCCTAAAAAGCAGCCCGGTATGTCGGACCGGGCCGGACCAAGCTTCGGGCCAACTTTATGCCCCGCTTTTCGGGCCAAGAGTAGCGGACTTTTTGGCCATTTGGGCCGGGTCGATTTTATTATTAAAACTGTAGTATTACTTTGCCCAAAACCCGGCAAAAACCTTTAAAAACCAATTTCGGGCCCGAAAATGGGCCTAAACTTTCTGTCCAAAAACCGCTGAATTTTGGACCGGGTCGGGCTCATGATGATCAGGTCCACTCTTCTTCATCCCAAGGGACGCAGAACTACTTTGCTTAGAAGATTTTTACATGTTGGCCTTGCATGCTATCAACTGTGAGCTGTAATTGATGTTATTATGTTATCTTCCTGCAGGTCCCCATCTGTGTCCCGTATTCGGTCCAAGATGCTCTATGCAACATCCAAGGACAGCTTGAGGAGGGAGTTGGAAGGAATCCATTATGAAATTCAGGCCACTGATTCATCTGAAGTGGATCTTGAGACTCTTCAAGACCGAGCTAAGTGATCGATTTCAAAGGCTCCATATATATTATAACCGATGAAGGGCCCTTTTTGTTCATCTAGTGACGCAAACTGATTTGCATGTTTTGTGAGACAAAGATGCATATACCTTCCTAGCTTGGTTAATAAACAACTTCATAACCCGGGAGGCTGATTACTACTGATTAGTCGTTCTTTCAGTTTCTGCTGTTGTTCTGGTTCCTTAATACAGTTTATTGAAATCGAATTCTACTCTCTTCAAACCTGAATGAAGCATGTATGTTATCTCTATTGCATTTTTGTATGACTCTTTATATGTTGGTCTCTATGTATGGATTCGCGTTGACGATATTCCCTTGTCAAAGACTTAATTTCTCTGTAGTTATAGACTTGTAGTTGTAGTTTGGTTTGTTGTGTGTTTCTTTTCGTTGGAAAAAAGAAAGTAAAAATAATCCAGTGAAAGTCGTGGAACAATACTTGTTATTTCATTGATTAGAGATTACTTATGAGAACTTGTTAAATGAGTGCTGATATAAAGAGTATACTAATTTAATCAAAAAATATATTTTGATAATTAAAAAAGCCCT

mRNA sequence

CGATTTCAATCAAATTGTTGCCGACCCACTTTAATTTTGTTGTGTGTACTACTTTTTCTTCTTCGTTTGCTCCATAACTTATCTCTCTCTCATAATCTCATCCCCTTAAATTTTGAAATTTGTACTTTCGACATTATATTCACCCACTTCTCTTCGCTGCAAAACTAAGCAACTATGGCTTTCAGAGGGAGGAATGCACAATCTGGTATAGGAGTTGGTGAGCACACCAAAAACACATTTACGGAATTGCAAAGGAAGAAGGTGCACCGTTATGTGGTGTTTAAGATTGATGAGAAAAAGAAGGAAGTAGTTGTGGAAAAGACCGGAGGACCTTCAGAAAGTTATGATGATTTTCTTGCATCGTTGCCTGAGAATGATTGCCGCTATGCAGTTTATGATTACGACTATGTGACCTCCGAGAACTGCCAGAAGAGCAAAATCTTTTTTGTTGCATGGTCCCCATCTGTGTCCCGTATTCGGTCCAAGATGCTCTATGCAACATCCAAGGACAGCTTGAGGAGGGAGTTGGAAGGAATCCATTATGAAATTCAGGCCACTGATTCATCTGAAGTGGATCTTGAGACTCTTCAAGACCGAGCTAAGTGATCGATTTCAAAGGCTCCATATATATTATAACCGATGAAGGGCCCTTTTTGTTCATCTAGTGACGCAAACTGATTTGCATGTTTTGTGAGACAAAGATGCATATACCTTCCTAGCTTGGTTAATAAACAACTTCATAACCCGGGAGGCTGATTACTACTGATTAGTCGTTCTTTCAGTTTCTGCTGTTGTTCTGGTTCCTTAATACAGTTTATTGAAATCGAATTCTACTCTCTTCAAACCTGAATGAAGCATGTATGTTATCTCTATTGCATTTTTGTATGACTCTTTATATGTTGGTCTCTATGTATGGATTCGCGTTGACGATATTCCCTTGTCAAAGACTTAATTTCTCTGTAGTTATAGACTTGTAGTTGTAGTTTGGTTTGTTGTGTGTTTCTTTTCGTTGGAAAAAAGAAAGTAAAAATAATCCAGTGAAAGTCGTGGAACAATACTTGTTATTTCATTGATTAGAGATTACTTATGAGAACTTGTTAAATGAGTGCTGATATAAAGAGTATACTAATTTAATCAAAAAATATATTTTGATAATTAAAAAAGCCCT

Coding sequence (CDS)

ATGGCTTTCAGAGGGAGGAATGCACAATCTGGTATAGGAGTTGGTGAGCACACCAAAAACACATTTACGGAATTGCAAAGGAAGAAGGTGCACCGTTATGTGGTGTTTAAGATTGATGAGAAAAAGAAGGAAGTAGTTGTGGAAAAGACCGGAGGACCTTCAGAAAGTTATGATGATTTTCTTGCATCGTTGCCTGAGAATGATTGCCGCTATGCAGTTTATGATTACGACTATGTGACCTCCGAGAACTGCCAGAAGAGCAAAATCTTTTTTGTTGCATGGTCCCCATCTGTGTCCCGTATTCGGTCCAAGATGCTCTATGCAACATCCAAGGACAGCTTGAGGAGGGAGTTGGAAGGAATCCATTATGAAATTCAGGCCACTGATTCATCTGAAGTGGATCTTGAGACTCTTCAAGACCGAGCTAAGTGA

Protein sequence

MAFRGRNAQSGIGVGEHTKNTFTELQRKKVHRYVVFKIDEKKKEVVVEKTGGPSESYDDFLASLPENDCRYAVYDYDYVTSENCQKSKIFFVAWSPSVSRIRSKMLYATSKDSLRRELEGIHYEIQATDSSEVDLETLQDRAK

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo03715.1	Spo03715.1	mRNA

Homology

[Close]

BLAST of Spo03715.1 vs. NCBI nr
Match: gi|902195892|gb|KNA12982.1| (hypothetical protein SOVF_120950 [Spinacia oleracea])

HSP 1 Score: 285.0 bits (728), Expect = 7.100e-74
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 1


		  
Query: 1   MAFRGRNAQSGIGVGEHTKNTFTELQRKKVHRYVVFKIDEKKKEVVVEKTGGPSESYDDF 60
           MAFRGRNAQSGIGVGEHTKNTFTELQRKKVHRYVVFKIDEKKKEVVVEKTGGPSESYDDF
Sbjct: 1   MAFRGRNAQSGIGVGEHTKNTFTELQRKKVHRYVVFKIDEKKKEVVVEKTGGPSESYDDF 60

Query: 61  LASLPENDCRYAVYDYDYVTSENCQKSKIFFVAWSPSVSRIRSKMLYATSKDSLRRELEG 120
           LASLPENDCRYAVYDYDYVTSENCQKSKIFFVAWSPSVSRIRSKMLYATSKDSLRRELEG
Sbjct: 61  LASLPENDCRYAVYDYDYVTSENCQKSKIFFVAWSPSVSRIRSKMLYATSKDSLRRELEG 120

Query: 121 IHYEIQATDSSEVDLETLQDRAK 144
           IHYEIQATDSSEVDLETLQDRAK
Sbjct: 121 IHYEIQATDSSEVDLETLQDRAK 143

[Close]

BLAST of Spo03715.1 vs. NCBI nr
Match: gi|731320854|ref|XP_010671034.1| (PREDICTED: actin-depolymerizing factor-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 254.2 bits (648), Expect = 1.300e-64
Identity = 126/143 (88.11%), Postives = 133/143 (93.01%), Query Frame = 1


		  
Query: 1   MAFRGRNAQSGIGVGEHTKNTFTELQRKKVHRYVVFKIDEKKKEVVVEKTGGPSESYDDF 60
           MAFRGRNAQSGIGV E  K  FTELQRKKVHRYVVFKIDEKKKEV VEKTGGP+ESYDDF
Sbjct: 1   MAFRGRNAQSGIGVAEQCKTIFTELQRKKVHRYVVFKIDEKKKEVSVEKTGGPAESYDDF 60

Query: 61  LASLPENDCRYAVYDYDYVTSENCQKSKIFFVAWSPSVSRIRSKMLYATSKDSLRRELEG 120
           LASLPE+DCRYAVYDYD+V +ENCQKSKIFF+AWSPSVSRIRSKMLYATSKDS RRELEG
Sbjct: 61  LASLPESDCRYAVYDYDFVNAENCQKSKIFFIAWSPSVSRIRSKMLYATSKDSFRRELEG 120

Query: 121 IHYEIQATDSSEVDLETLQDRAK 144
           IHYEIQATD +EVDLE LQ+RAK
Sbjct: 121 IHYEIQATDPTEVDLEALQERAK 143

[Close]

BLAST of Spo03715.1 vs. NCBI nr
Match: gi|567854203|ref|XP_006420221.1| (hypothetical protein CICLE_v10006173mg [Citrus clementina])

HSP 1 Score: 244.2 bits (622), Expect = 1.400e-61
Identity = 115/143 (80.42%), Postives = 133/143 (93.01%), Query Frame = 1


		  
Query: 1   MAFRGRNAQSGIGVGEHTKNTFTELQRKKVHRYVVFKIDEKKKEVVVEKTGGPSESYDDF 60
           M+FRG NA SG+GV +H+K+T+ ELQRKKVHRYV+FKIDEKKKEVVVEKTGGP+ESYDDF
Sbjct: 1   MSFRGTNASSGMGVADHSKSTYLELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYDDF 60

Query: 61  LASLPENDCRYAVYDYDYVTSENCQKSKIFFVAWSPSVSRIRSKMLYATSKDSLRRELEG 120
            ASLP+NDCRYAVYD+D+VTSENCQKSKIFF+AWSP VSRIR+KMLYATSKD  RREL+G
Sbjct: 61  TASLPDNDCRYAVYDFDFVTSENCQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDG 120

Query: 121 IHYEIQATDSSEVDLETLQDRAK 144
           IHYEIQATD SE+DLE ++DRA+
Sbjct: 121 IHYEIQATDPSEMDLEVIRDRAR 143

[Close]

BLAST of Spo03715.1 vs. NCBI nr
Match: gi|596202399|ref|XP_007223711.1| (hypothetical protein PRUPE_ppa013034mg [Prunus persica])

HSP 1 Score: 243.4 bits (620), Expect = 2.400e-61
Identity = 116/142 (81.69%), Postives = 131/142 (92.25%), Query Frame = 1


		  
Query: 1   MAFRGRNAQSGIGVGEHTKNTFTELQRKKVHRYVVFKIDEKKKEVVVEKTGGPSESYDDF 60
           MAFRG NA SG+GV EH KNTF ELQRKK +RYV+FKIDEKKKEVVVEKTGGP+ESYDDF
Sbjct: 1   MAFRGGNASSGMGVAEHCKNTFLELQRKKAYRYVIFKIDEKKKEVVVEKTGGPAESYDDF 60

Query: 61  LASLPENDCRYAVYDYDYVTSENCQKSKIFFVAWSPSVSRIRSKMLYATSKDSLRRELEG 120
            AS+PENDCRYA+YD+D+VTSENCQKSKIFF+AWSPSVSRIR+KMLYATSKD  RREL+G
Sbjct: 61  TASMPENDCRYAIYDFDFVTSENCQKSKIFFIAWSPSVSRIRAKMLYATSKDRFRRELDG 120

Query: 121 IHYEIQATDSSEVDLETLQDRA 143
           IHYEIQATD +E++LE L+DRA
Sbjct: 121 IHYEIQATDPTEMELEVLRDRA 142

[Close]

BLAST of Spo03715.1 vs. NCBI nr
Match: gi|225433128|ref|XP_002285175.1| (PREDICTED: actin-depolymerizing factor [Vitis vinifera])

HSP 1 Score: 243.0 bits (619), Expect = 3.100e-61
Identity = 116/142 (81.69%), Postives = 131/142 (92.25%), Query Frame = 1


		  
Query: 1   MAFRGRNAQSGIGVGEHTKNTFTELQRKKVHRYVVFKIDEKKKEVVVEKTGGPSESYDDF 60
           M+FRG NA SG+GV +H K T+ ELQRKKVHRYV+FKIDEKKKEVVVEKTGGP+ESYDDF
Sbjct: 1   MSFRGSNASSGMGVADHCKATYLELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYDDF 60

Query: 61  LASLPENDCRYAVYDYDYVTSENCQKSKIFFVAWSPSVSRIRSKMLYATSKDSLRRELEG 120
            ASLPENDCRYA+YD+D+VTSENCQKSKIFF+AWSPSVSRIR+KMLYATSKD  RRELEG
Sbjct: 61  TASLPENDCRYAIYDFDFVTSENCQKSKIFFIAWSPSVSRIRAKMLYATSKDRFRRELEG 120

Query: 121 IHYEIQATDSSEVDLETLQDRA 143
           IHYEIQATD +E+DLE L++RA
Sbjct: 121 IHYEIQATDPTEMDLEVLRERA 142

[Close]

BLAST of Spo03715.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R2C9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_120950 PE=3 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 4.900e-74
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 1


		  
Query: 1   MAFRGRNAQSGIGVGEHTKNTFTELQRKKVHRYVVFKIDEKKKEVVVEKTGGPSESYDDF 60
           MAFRGRNAQSGIGVGEHTKNTFTELQRKKVHRYVVFKIDEKKKEVVVEKTGGPSESYDDF
Sbjct: 1   MAFRGRNAQSGIGVGEHTKNTFTELQRKKVHRYVVFKIDEKKKEVVVEKTGGPSESYDDF 60

Query: 61  LASLPENDCRYAVYDYDYVTSENCQKSKIFFVAWSPSVSRIRSKMLYATSKDSLRRELEG 120
           LASLPENDCRYAVYDYDYVTSENCQKSKIFFVAWSPSVSRIRSKMLYATSKDSLRRELEG
Sbjct: 61  LASLPENDCRYAVYDYDYVTSENCQKSKIFFVAWSPSVSRIRSKMLYATSKDSLRRELEG 120

Query: 121 IHYEIQATDSSEVDLETLQDRAK 144
           IHYEIQATDSSEVDLETLQDRAK
Sbjct: 121 IHYEIQATDSSEVDLETLQDRAK 143

[Close]

BLAST of Spo03715.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CSN6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g049080 PE=3 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 9.300e-65
Identity = 126/143 (88.11%), Postives = 133/143 (93.01%), Query Frame = 1


		  
Query: 1   MAFRGRNAQSGIGVGEHTKNTFTELQRKKVHRYVVFKIDEKKKEVVVEKTGGPSESYDDF 60
           MAFRGRNAQSGIGV E  K  FTELQRKKVHRYVVFKIDEKKKEV VEKTGGP+ESYDDF
Sbjct: 1   MAFRGRNAQSGIGVAEQCKTIFTELQRKKVHRYVVFKIDEKKKEVSVEKTGGPAESYDDF 60

Query: 61  LASLPENDCRYAVYDYDYVTSENCQKSKIFFVAWSPSVSRIRSKMLYATSKDSLRRELEG 120
           LASLPE+DCRYAVYDYD+V +ENCQKSKIFF+AWSPSVSRIRSKMLYATSKDS RRELEG
Sbjct: 61  LASLPESDCRYAVYDYDFVNAENCQKSKIFFIAWSPSVSRIRSKMLYATSKDSFRRELEG 120

Query: 121 IHYEIQATDSSEVDLETLQDRAK 144
           IHYEIQATD +EVDLE LQ+RAK
Sbjct: 121 IHYEIQATDPTEVDLEALQERAK 143

[Close]

BLAST of Spo03715.1 vs. UniProtKB/TrEMBL
Match: V4S974_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006173mg PE=3 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 9.600e-62
Identity = 115/143 (80.42%), Postives = 133/143 (93.01%), Query Frame = 1


		  
Query: 1   MAFRGRNAQSGIGVGEHTKNTFTELQRKKVHRYVVFKIDEKKKEVVVEKTGGPSESYDDF 60
           M+FRG NA SG+GV +H+K+T+ ELQRKKVHRYV+FKIDEKKKEVVVEKTGGP+ESYDDF
Sbjct: 1   MSFRGTNASSGMGVADHSKSTYLELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYDDF 60

Query: 61  LASLPENDCRYAVYDYDYVTSENCQKSKIFFVAWSPSVSRIRSKMLYATSKDSLRRELEG 120
            ASLP+NDCRYAVYD+D+VTSENCQKSKIFF+AWSP VSRIR+KMLYATSKD  RREL+G
Sbjct: 61  TASLPDNDCRYAVYDFDFVTSENCQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDG 120

Query: 121 IHYEIQATDSSEVDLETLQDRAK 144
           IHYEIQATD SE+DLE ++DRA+
Sbjct: 121 IHYEIQATDPSEMDLEVIRDRAR 143

[Close]

BLAST of Spo03715.1 vs. UniProtKB/TrEMBL
Match: A0A067EUN7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031876mg PE=3 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 9.600e-62
Identity = 115/143 (80.42%), Postives = 133/143 (93.01%), Query Frame = 1


		  
Query: 1   MAFRGRNAQSGIGVGEHTKNTFTELQRKKVHRYVVFKIDEKKKEVVVEKTGGPSESYDDF 60
           M+FRG NA SG+GV +H+K+T+ ELQRKKVHRYV+FKIDEKKKEVVVEKTGGP+ESYDDF
Sbjct: 1   MSFRGTNASSGMGVADHSKSTYLELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYDDF 60

Query: 61  LASLPENDCRYAVYDYDYVTSENCQKSKIFFVAWSPSVSRIRSKMLYATSKDSLRRELEG 120
            ASLP+NDCRYAVYD+D+VTSENCQKSKIFF+AWSP VSRIR+KMLYATSKD  RREL+G
Sbjct: 61  TASLPDNDCRYAVYDFDFVTSENCQKSKIFFIAWSPDVSRIRAKMLYATSKDRFRRELDG 120

Query: 121 IHYEIQATDSSEVDLETLQDRAK 144
           IHYEIQATD SE+DLE ++DRA+
Sbjct: 121 IHYEIQATDPSEMDLEVIRDRAR 143

[Close]

BLAST of Spo03715.1 vs. UniProtKB/TrEMBL
Match: M5XZY7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013034mg PE=3 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 1.600e-61
Identity = 116/142 (81.69%), Postives = 131/142 (92.25%), Query Frame = 1


		  
Query: 1   MAFRGRNAQSGIGVGEHTKNTFTELQRKKVHRYVVFKIDEKKKEVVVEKTGGPSESYDDF 60
           MAFRG NA SG+GV EH KNTF ELQRKK +RYV+FKIDEKKKEVVVEKTGGP+ESYDDF
Sbjct: 1   MAFRGGNASSGMGVAEHCKNTFLELQRKKAYRYVIFKIDEKKKEVVVEKTGGPAESYDDF 60

Query: 61  LASLPENDCRYAVYDYDYVTSENCQKSKIFFVAWSPSVSRIRSKMLYATSKDSLRRELEG 120
            AS+PENDCRYA+YD+D+VTSENCQKSKIFF+AWSPSVSRIR+KMLYATSKD  RREL+G
Sbjct: 61  TASMPENDCRYAIYDFDFVTSENCQKSKIFFIAWSPSVSRIRAKMLYATSKDRFRRELDG 120

Query: 121 IHYEIQATDSSEVDLETLQDRA 143
           IHYEIQATD +E++LE L+DRA
Sbjct: 121 IHYEIQATDPTEMELEVLRDRA 142

[Close]

BLAST of Spo03715.1 vs. ExPASy Swiss-Prot
Match: ADF_VITVI (Actin-depolymerizing factor OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 4.000e-61
Identity = 110/142 (77.46%), Postives = 131/142 (92.25%), Query Frame = 1


		  
Query: 1   MAFRGRNAQSGIGVGEHTKNTFTELQRKKVHRYVVFKIDEKKKEVVVEKTGGPSESYDDF 60
           M+FRG NA SG+GV +H+KNTF EL+RKKVHRYV+FKIDEKKKEVVVEKTGGP+ES+D+F
Sbjct: 1   MSFRGLNASSGMGVADHSKNTFLELKRKKVHRYVIFKIDEKKKEVVVEKTGGPAESFDEF 60

Query: 61  LASLPENDCRYAVYDYDYVTSENCQKSKIFFVAWSPSVSRIRSKMLYATSKDSLRRELEG 120
            A+LPENDCRYAVYD+D+VTSENCQKSKIFF+AWSP  SRIR+KMLYATSK+  RREL+G
Sbjct: 61  AAALPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPDSSRIRAKMLYATSKERFRRELDG 120

Query: 121 IHYEIQATDSSEVDLETLQDRA 143
           +HYEIQATD +E+DLE L++RA
Sbjct: 121 VHYEIQATDPTEMDLEVLRERA 142

[Close]

BLAST of Spo03715.1 vs. ExPASy Swiss-Prot
Match: ADF6_ARATH (Actin-depolymerizing factor 6 OS=Arabidopsis thaliana GN=ADF6 PE=1 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 2.700e-57
Identity = 111/145 (76.55%), Postives = 126/145 (86.90%), Query Frame = 1


		  
Query: 1   MAFRGR---NAQSGIGVGEHTKNTFTELQRKKVHRYVVFKIDEKKKEVVVEKTGGPSESY 60
           M+FRG    NA SG+GV + +K TF ELQRKK HRYVVFKIDE KKEVVVEKTG P+ESY
Sbjct: 1   MSFRGLSRPNAISGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESY 60

Query: 61  DDFLASLPENDCRYAVYDYDYVTSENCQKSKIFFVAWSPSVSRIRSKMLYATSKDSLRRE 120
           DDFLASLP+NDCRYAVYD+D+VTSENCQKSKIFF AWSPS S IR+K+LY+TSKD L RE
Sbjct: 61  DDFLASLPDNDCRYAVYDFDFVTSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRE 120

Query: 121 LEGIHYEIQATDSSEVDLETLQDRA 143
           L+GIHYEIQATD +EVDLE L++RA
Sbjct: 121 LQGIHYEIQATDPTEVDLEVLRERA 145

[Close]

BLAST of Spo03715.1 vs. ExPASy Swiss-Prot
Match: ADF11_ORYSJ (Actin-depolymerizing factor 11 OS=Oryza sativa subsp. japonica GN=ADF11 PE=2 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.100e-54
Identity = 107/144 (74.31%), Postives = 124/144 (86.11%), Query Frame = 1


		  
Query: 1   MAF-RGR-NAQSGIGVGEHTKNTFTELQRKKVHRYVVFKIDEKKKEVVVEKTGGPSESYD 60
           MAF R R NA SGIGV    K TF ELQRKK HRYV+FKID+K KEVVVEKTG  +ES+D
Sbjct: 1   MAFVRSRANASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFD 60

Query: 61  DFLASLPENDCRYAVYDYDYVTSENCQKSKIFFVAWSPSVSRIRSKMLYATSKDSLRREL 120
           DF+ SLPE+DCRYA+YD+D+VT ENCQKSKIFFVAWSPSVSRIR+KMLYATSK+  RREL
Sbjct: 61  DFMDSLPESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRREL 120

Query: 121 EGIHYEIQATDSSEVDLETLQDRA 143
           +G+HYEIQATD SE+D+E L++RA
Sbjct: 121 DGVHYEIQATDPSELDIELLRERA 144

[Close]

BLAST of Spo03715.1 vs. ExPASy Swiss-Prot
Match: ADF2_ORYSJ (Actin-depolymerizing factor 2 OS=Oryza sativa subsp. japonica GN=ADF2 PE=2 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.300e-51
Identity = 97/136 (71.32%), Postives = 118/136 (86.76%), Query Frame = 1


		  
Query: 7   NAQSGIGVGEHTKNTFTELQRKKVHRYVVFKIDEKKKEVVVEKTGGPSESYDDFLASLPE 66
           NA SG+GV    ++TF ELQ KK  RYV+FKI+EK+K+VVVEKTG  +ESYDDFLASLPE
Sbjct: 9   NASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLASLPE 68

Query: 67  NDCRYAVYDYDYVTSENCQKSKIFFVAWSPSVSRIRSKMLYATSKDSLRRELEGIHYEIQ 126
           NDCRYA+YD+D+VT EN QKSKIFF+AWSPS SRIR+KMLY+TSKD +++EL+G HYEIQ
Sbjct: 69  NDCRYALYDFDFVTGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQELDGFHYEIQ 128

Query: 127 ATDSSEVDLETLQDRA 143
           ATD +EVDLE L++RA
Sbjct: 129 ATDPTEVDLEVLRERA 144

[Close]

BLAST of Spo03715.1 vs. ExPASy Swiss-Prot
Match: ADF10_ORYSJ (Actin-depolymerizing factor 10 OS=Oryza sativa subsp. japonica GN=ADF10 PE=2 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 6.200e-46
Identity = 85/138 (61.59%), Postives = 114/138 (82.61%), Query Frame = 1


		  
Query: 5   GRNAQSGIGVGEHTKNTFTELQRKKVHRYVVFKIDEKKKEVVVEKTGGPSESYDDFLASL 64
           G  + + I V E +K+ F EL+R+KVHRYV+FKID++++E+VVEKTG P ESYDDF ASL
Sbjct: 11  GGGSPAWIEVPEKSKSAFWELKRRKVHRYVIFKIDDRREEIVVEKTGAPGESYDDFTASL 70

Query: 65  PENDCRYAVYDYDYVTSENCQKSKIFFVAWSPSVSRIRSKMLYATSKDSLRRELEGIHYE 124
           P +DCRYAVYD D+V+ +NC+KSKIFF++WSPSVSRIR+K +YA S++  R EL+G+H+E
Sbjct: 71  PADDCRYAVYDLDFVSDDNCRKSKIFFISWSPSVSRIRAKTIYAVSRNQFRHELDGVHFE 130

Query: 125 IQATDSSEVDLETLQDRA 143
           IQATD  ++DLE L+ RA
Sbjct: 131 IQATDPDDMDLEVLRGRA 148

[Close]

BLAST of Spo03715.1 vs. TAIR (Arabidopsis)
Match: AT2G31200.1 (actin depolymerizing factor 6)

HSP 1 Score: 222.6 bits (566), Expect = 1.500e-58
Identity = 111/145 (76.55%), Postives = 126/145 (86.90%), Query Frame = 1


		  
Query: 1   MAFRGR---NAQSGIGVGEHTKNTFTELQRKKVHRYVVFKIDEKKKEVVVEKTGGPSESY 60
           M+FRG    NA SG+GV + +K TF ELQRKK HRYVVFKIDE KKEVVVEKTG P+ESY
Sbjct: 1   MSFRGLSRPNAISGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESY 60

Query: 61  DDFLASLPENDCRYAVYDYDYVTSENCQKSKIFFVAWSPSVSRIRSKMLYATSKDSLRRE 120
           DDFLASLP+NDCRYAVYD+D+VTSENCQKSKIFF AWSPS S IR+K+LY+TSKD L RE
Sbjct: 61  DDFLASLPDNDCRYAVYDFDFVTSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRE 120

Query: 121 LEGIHYEIQATDSSEVDLETLQDRA 143
           L+GIHYEIQATD +EVDLE L++RA
Sbjct: 121 LQGIHYEIQATDPTEVDLEVLRERA 145

[Close]

BLAST of Spo03715.1 vs. TAIR (Arabidopsis)
Match: AT4G34970.1 (actin depolymerizing factor 9)

HSP 1 Score: 176.8 bits (447), Expect = 9.600e-45
Identity = 81/138 (58.70%), Postives = 108/138 (78.26%), Query Frame = 1


		  
Query: 6   RNAQSGIGVGEHTKNTFTELQRKKVHRYVVFKIDEKKKEVVVEKTGGPSESYDDFLASLP 65
           + A SG+ + +  K +F E++ KKVHRYVV+K++EK ++V V+K G   ESYDD  ASLP
Sbjct: 4   KTATSGMWMTDDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAASLP 63

Query: 66  ENDCRYAVYDYDYVTSENCQKSKIFFVAWSPSVSRIRSKMLYATSKDSLRRELEGIHYEI 125
           E+DCRYAV+D+DYVT +NC+ SKIFF+ WSP  SRIR KM+YATSK  LRR L+G+HYE+
Sbjct: 64  EDDCRYAVFDFDYVTVDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVLDGVHYEL 123

Query: 126 QATDSSEVDLETLQDRAK 144
           QATD +E+  + +QDRAK
Sbjct: 124 QATDPTEMGFDKIQDRAK 141

[Close]

BLAST of Spo03715.1 vs. TAIR (Arabidopsis)
Match: AT2G16700.1 (actin depolymerizing factor 5)

HSP 1 Score: 175.6 bits (444), Expect = 2.100e-44
Identity = 83/143 (58.04%), Postives = 112/143 (78.32%), Query Frame = 1


		  
Query: 1   MAFRGRNAQSGIGVGEHTKNTFTELQRKKVHRYVVFKIDEKKKEVVVEKTGGPSESYDDF 60
           MA   + A +G+ V +   ++F +++ KKVHRY+VFKI+EK ++V V+K GG  ESY D 
Sbjct: 1   MAMAFKMATTGMRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDL 60

Query: 61  LASLPENDCRYAVYDYDYVTSENCQKSKIFFVAWSPSVSRIRSKMLYATSKDSLRRELEG 120
             SLP +DCRYAV+D+D+VT +NC+KSKIFF+AWSP  S+IR+K+LYATSKD LRR LEG
Sbjct: 61  EDSLPVDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRVLEG 120

Query: 121 IHYEIQATDSSEVDLETLQDRAK 144
           IHYE+QATD +E+  + +QDRAK
Sbjct: 121 IHYELQATDPTEMGFDIIQDRAK 143

[Close]

BLAST of Spo03715.1 vs. TAIR (Arabidopsis)
Match: AT3G46010.2 (actin depolymerizing factor 1)

HSP 1 Score: 172.9 bits (437), Expect = 1.400e-43
Identity = 77/139 (55.40%), Postives = 111/139 (79.86%), Query Frame = 1


		  
Query: 4   RGRNAQSGIGVGEHTKNTFTELQRKKVHRYVVFKIDEKKKEVVVEKTGGPSESYDDFLAS 63
           R  NA SG+ V +  K  F EL+ K+ HR++V+KI+EK+K+VVVEK G P ++Y++F A 
Sbjct: 11  RSANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAAC 70

Query: 64  LPENDCRYAVYDYDYVTSENCQKSKIFFVAWSPSVSRIRSKMLYATSKDSLRRELEGIHY 123
           LP ++CRYA+YD+D+VT+ENCQKSKIFF+AW P ++++RSKM+YA+SKD  +REL+GI  
Sbjct: 71  LPADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQV 130

Query: 124 EIQATDSSEVDLETLQDRA 143
           E+QATD +E+DL+  + RA
Sbjct: 131 ELQATDPTEMDLDVFRSRA 149

[Close]

BLAST of Spo03715.1 vs. TAIR (Arabidopsis)
Match: AT5G59890.1 (actin depolymerizing factor 4)

HSP 1 Score: 172.9 bits (437), Expect = 1.400e-43
Identity = 78/135 (57.78%), Postives = 110/135 (81.48%), Query Frame = 1


		  
Query: 7   NAQSGIGVGEHTKNTFTELQRKKVHRYVVFKIDEKKKEVVVEKTGGPSESYDDFLASLPE 66
           NA SG+ V +  K  F EL+ K+ HR++V+KI+EK+K+V+VEK G P  +Y+DF ASLP 
Sbjct: 3   NAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLPA 62

Query: 67  NDCRYAVYDYDYVTSENCQKSKIFFVAWSPSVSRIRSKMLYATSKDSLRRELEGIHYEIQ 126
           ++CRYA+YD+D+VT+ENCQKSKIFF+AW P V+++RSKM+YA+SKD  +REL+GI  E+Q
Sbjct: 63  DECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQ 122

Query: 127 ATDSSEVDLETLQDR 142
           ATD +E+DL+ L+ R
Sbjct: 123 ATDPTEMDLDVLKSR 137

The following BLAST results are available for this feature:

BLAST of Spo03715.1 vs. NCBI nr
BLAST of Spo03715.1 vs. UniProtKB/TrEMBL
BLAST of Spo03715.1 vs. ExPASy Swiss-Prot
BLAST of Spo03715.1 vs. TAIR (Arabidopsis)

BLAST of Spo03715.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902195892\|gb\|KNA12982.1\|	7.1e-74	100.	hypothetical protein SOVF_1209...	[more]
gi\|731320854\|ref\|XP_010671034.1\|	1.3e-64	88.1	PREDICTED: actin-depolymerizin...	[more]
gi\|567854203\|ref\|XP_006420221.1\|	1.4e-61	80.4	hypothetical protein CICLE_v10...	[more]
gi\|596202399\|ref\|XP_007223711.1\|	2.4e-61	81.6	hypothetical protein PRUPE_ppa...	[more]
gi\|225433128\|ref\|XP_002285175.1\|	3.1e-61	81.6	PREDICTED: actin-depolymerizin...	[more]

BLAST of Spo03715.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R2C9_SPIOL	4.9e-74	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CSN6_BETVU	9.3e-65	88.1	Uncharacterized protein OS=Bet...	[more]
V4S974_9ROSI	9.6e-62	80.4	Uncharacterized protein OS=Cit...	[more]
A0A067EUN7_CITSI	9.6e-62	80.4	Uncharacterized protein OS=Cit...	[more]
M5XZY7_PRUPE	1.6e-61	81.6	Uncharacterized protein OS=Pru...	[more]

BLAST of Spo03715.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
ADF_VITVI	4.0e-61	77.4	Actin-depolymerizing factor OS...	[more]
ADF6_ARATH	2.7e-57	76.5	Actin-depolymerizing factor 6 ...	[more]
ADF11_ORYSJ	2.1e-54	74.3	Actin-depolymerizing factor 11...	[more]
ADF2_ORYSJ	1.3e-51	71.3	Actin-depolymerizing factor 2 ...	[more]
ADF10_ORYSJ	6.2e-46	61.5	Actin-depolymerizing factor 10...	[more]

BLAST of Spo03715.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT2G31200.1	1.5e-58	76.5	actin depolymerizing factor 6	[more]
AT4G34970.1	9.6e-45	58.7	actin depolymerizing factor 9	[more]
AT2G16700.1	2.1e-44	58.0	actin depolymerizing factor 5	[more]
AT3G46010.2	1.4e-43	55.4	actin depolymerizing factor 1	[more]
AT5G59890.1	1.4e-43	57.7	actin depolymerizing factor 4	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002108	Actin-depolymerising factor homology domain	PFAM	PF00241	Cofilin_ADF	coord: 19..140 score: 9.0
IPR002108	Actin-depolymerising factor homology domain	SMART	SM00102	adf_2	coord: 16..143 score: 5.1
IPR002108	Actin-depolymerising factor homology domain	PROFILE	PS51263	ADF_H	coord: 11..143 score: 40
IPR017904	ADF/Cofilin/Destrin	PRINTS	PR00006	COFILIN	coord: 112..128 score: 5.4E-5coord: 68..88 score: 5.
IPR017904	ADF/Cofilin/Destrin	PANTHER	PTHR11913	COFILIN-RELATED	coord: 7..142 score: 1.3E
None	No IPR available	PANTHER	PTHR11913:SF20	ACTIN-DEPOLYMERIZING FACTOR 6	coord: 7..142 score: 1.3E
None	No IPR available	unknown	SSF55753	Actin depolymerizing proteins	coord: 8..141 score: 5.35

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030042	actin filament depolymerization
biological_process	GO:0034660	ncRNA metabolic process
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0035304	regulation of protein dephosphorylation
biological_process	GO:0010304	PSII associated light-harvesting complex II catabolic process
biological_process	GO:0042793	plastid transcription
biological_process	GO:0019684	photosynthesis, light reaction
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0009561	megagametogenesis
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0009902	chloroplast relocation
biological_process	GO:0015995	chlorophyll biosynthetic process
biological_process	GO:0016117	carotenoid biosynthetic process
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003779	actin binding
molecular_function	GO:0031072	heat shock protein binding
molecular_function	GO:0051082	unfolded protein binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo05235	0.66	Barchart \| Table
Spo12749	0.66	Barchart \| Table
Spo00671	0.65	Barchart \| Table