Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATGTACTTTGGATGTTAAGATCTCCCTCTTGGCAATTTACCAGAACAAGAACACTTAAAAGTTAAAAACGCTATCCACTCTCTCTCTCTCTCTCTCGCGACTCCCACTCTTTCATTCTCTCTCTTTGTTCCTCCACTGTATCAGTTGGAAGTTCCGACTTAAAAACTGCTATGCAAATTCCAACAGCACCTCGTAGCATCAGCTCAGCTGCTTCAAATCTGTTCCTTTACTCCCCACCATTTCACCTTAATTCCTCTCTTATCAAACCAACAACCTTAAACTTCCCATTAAACCATAATTTACCCACTTCAATTTCAATTCCTACTTTAATTCCCACTAAAAAATTGCTCTGTAAACCCCCTTCTGCCAAACATGTCCGAGAAGATTATCTTGTGGTAATTTTTCCAAAACCCTTTTAAAAAACTAATTAATTTTTCCATTTTATTGATTTATCTATGTTTTTACCCCATTTAATAATACCCATTTGAATTCATTGTTTGAGTATGTTTTTGTTTGTTAATTTTAATTATTTTCTTGGGATTGAATTGCAGAAAAAGTTGTCAGCTAATGAGATTACGGAGCTTGTGAGAGGGGAGAGAAATGTGCCCCTTATTATTGATTTTTATGCAACATGGTGTGGCCCCTGTATTTTGATGGCTCAAGAGCTTGAAATGGTGAGTTTCTGTTTATTGTCGTTGAATATGTGGGTTTTTAGTTTATATGTTACTTGATCTAAGGTACCTTTGGTACACGAACTGGCAAGGGAATGCAATTCACTACCTAATATTACGAAATTAGTCCAAAAGTGTGCCATTGTATCAATTTTTTCGTACCAGGGTTAGGGGGGATTAGCGAATTAGGTAACACGACTTTGTGATTACATATGTGGGGTTGAATTGCATATGAATTGCTTAAGACTCATATGTTGTGCTATTTTTGCTTGTTTCTGATGATTTCCTGATCAATAAACAAGTGTTGTGAGAAAAGACATTGATGTGTTGTAAAAGTTTAAATTTTAACTAGCTTTTGAGCCCGTTCTTATAGTGGTTATTTAGTCTATCTTTTTAGTTCTAATTTTATTGACCTTGTGATTTAGAAAGAACAAATGATTTAAATAGAGGTAAATTTTGAAAGTTGAAAAAATACATAAATTAAATAGTATATTAATATTGAGTGTTAATCGGGAAGATGGAGTGGAAGATGTTGAATGAATAGATTGGTAAATTAATGGTGTATGAGGAAGATGAAGTGAAAGAGGCTGTTGGAGTTGTATGATATATCAAAAAACAAAGAAAAAATAGAATAAAAAACTAAATTGATGGAGGAAAGAATGGATGACACATGTCATCTAATCAAATGTGATGACACGTGTCATCTAATCAAATGTGGTTTCACTTTTTAAATACTAGGTATAGACTAGGTATAGATGATGCACACTTATGTATAGTCTGCATTGTGTATTCATGAGTGAGTTTGGTGTTTTTTTGTTTTCAGTTGGCTGTTGAGTACGAAAAAAATGCAATGATTGTAAAGGTCGACACTGATGACGAGTATGAATTTGCTCGTGACATGCAGGTAATCCTACTTGATTATAATTCTACCTTGGTCATTACTTGTTAATTCAAGCTCAAACTAAATAGTCATGTCAACCAAACTGTCATTAGACATGCATTTGACCATCAAAGTACATTCTTGTTCTAAATGGTTGTTTGACTTGCTACGAACGATTACTAGAATGCTATGTTTCTCAAACTCTTTGGAAGTGTTGAAATAGCTACGAGTATCTGAAATGGATTTGTCAAGCTTCTCTCTGTAGTTTTGTAAGAGTCATGAAGTACCCATTTCTGATCAAGGTGTCGGAAAATCAGATAGTTGGAGCAACAAAGCTGAATAGGGGTGAAGGCATGTCTTCCCCCATAGTACATTATGAATACCGAGCAACTGGAACTTTTCACTGCTCCATATGGGTAGCTAAAATTACTCTGCACTCCCTCATATTACTAGAAATATCACACGATACCCAGTCATATGTCAAAATACTGCCTCCTTAGCTACACAAATCACAATCATTTTTATTCTGCTTCCAATTTTCTGCACTAATTGATGCTTAAAGTATATATTTTTTTTTTTTAGTTAGAGATTATTTTGTATTGCTTATGGAGATTCATTAAAAAAAATGTATTTCTTATTAAGAGAAGTAGAAAACAATTACAGGTTGACCCCTTACACAAGAAAGAACAAAACAGCAAAGCCTGAAAAAAACATTTTCTATCACATTTACAAATATGTATAACTCTTATCTTCAAGGGTAAATTTCTAGGCATACGACCATGTGTCCTTTACACTAGTCTGTATCCTTCTAGAGGGAATATTTTCTTGCCCTCTGCACATAATAGACTACAGCTTCCGTAGCAGCAAGGTAATCCCCCTTCCGTAACGTCTGATAGATCTGTTCGACAGAATAGGGCATTTGACTAATCACCCTTTAAGAATGATGCTTTGGATTTTGAACATTAATTACCAATTAGTTTTATAATGCAACTAAACATATAAGTTTTTGTATGATAGAAATTGAATAACTTGAAAATCCGATTGACGTATAAATTACATTGAAACCACTGGAAATCTATTGCTTAACCCAAAACCAAACAAGGAAGTCAATATCATATGTTGAAGTACTAAATTCCTTAACTTTACGGGTTCCTCATTTGCCTCCTGGAAATCCCAAGATTTTTTTCTTTTCGATCTTTTTCCAGGTAGCAACAATGTTCGCTTTGTGCTGCAACTTACATAAGTGATTGTTTGCTCTGTGGTCTATATCTTCTTTCAATTTTCTGATTGTTTAAACTCTAGTATTTATAGTTTGGCTACTTCAAAAATCCAAACAAAAATATTAGTTATGTTTTGGCTTTATGTTTCCCATGAATTCCCTAGTGAATTTTGTAATACAAGTTCCAGCAGTTACCTTGACATGGCCTTGGCATACCGCGTATCTATGTAGGTGCAAAGGTGGTCTCCACAACCACAAAATCCCTTCACTATTTCTTTTGTCGGGATGAGGTGCATCAGTTTGACACCACAATAGGCCAACTCCCAAGCCCAGTTGTAAATTAATGTGCGTGGTCATATAGATTTAAGTATAGTAATTAATGTTTGATTTCTGGATCATATACTGCAGCGTTAGTGTTTAGATAAGCGCATGTAGCAATGGTTGAAGGAAAGGAAAGGGGAGAAAAGAGGGGGAAGGGGAAGTGAACTTGTATTTTTCTTTCAAATCTATCCAATTTTGGAAGGATTTGGCGTATTGATAATGAAAGGAATTCCGGCACCTCCATTTTTTTCCTCAACACATTTGTAGTCAAACAAAGCAAAATTGATTTGTTGCACTCTCTCCCCCTCCTTTCTCTTCAAATCCTCTTATCCAATATTATTAGTAAAGAGTGTCATTGAAAACAAGTGAATAATCAAGTCAAAAGTGATGTGTGCAAATTTACATTTTGTAAAATGGTGCTATACATTCATGAAACATGTGTTGCTGCACTTTGGTCTGTGATTCTAGTATACAGCATATAAGTGCATTATGTAAAGGTGAAAACTTATGTGGTAATATGTGGGCAGGTACGGGGTCTTCCAACATTGTATTTCATCAGCCCAGATCCAAATAAAGACGCAATTAGAACAGAAGGGCTCATTCCTATACAGATGATGAGGGATATACTTGATAATGATATGTGAGCCGTGAGTTAGGTGGAACAGAAAAGCTCTTCACAGCATGCAGTTTTGTTATTAGCTTCAGGTTAGGTTTCTGAGCCAATTGTCAGTCTGCACCTCGATTATGTTACTTCAGAGGCTATCTTAGATATATGTTTGTATTCTTTCCAACTGTAAGCTATTTTTTTGTTGTTGAATGGAACGAATGTAACCTTTATCAATGTTTTGATTAGCTTTGTTCAGTGCAAACTGCCCTGTTCTTGATGGGAGCTTCAAAGCTGTACTGTAATCTTCAATATAGTATTTGTTCAAGAGACTAAACCACGAGGCAAGGCGATGAGTATATTGATCTGACCAAAACTACCTAGCCTGAAATAACCGGATTTAAACCCAAATTATACAGAGTCTTCTTTTGCGAAATTGACATGAAATGAAAATTTTGTTGATTTAAATCAACCCTACCA AAATGTACTTTGGATGTTAAGATCTCCCTCTTGGCAATTTACCAGAACAAGAACACTTAAAAGTTAAAAACGCTATCCACTCTCTCTCTCTCTCTCTCGCGACTCCCACTCTTTCATTCTCTCTCTTTGTTCCTCCACTGTATCAGTTGGAAGTTCCGACTTAAAAACTGCTATGCAAATTCCAACAGCACCTCGTAGCATCAGCTCAGCTGCTTCAAATCTGTTCCTTTACTCCCCACCATTTCACCTTAATTCCTCTCTTATCAAACCAACAACCTTAAACTTCCCATTAAACCATAATTTACCCACTTCAATTTCAATTCCTACTTTAATTCCCACTAAAAAATTGCTCTGTAAACCCCCTTCTGCCAAACATGTCCGAGAAGATTATCTTGTGAAAAAGTTGTCAGCTAATGAGATTACGGAGCTTGTGAGAGGGGAGAGAAATGTGCCCCTTATTATTGATTTTTATGCAACATGGTGTGGCCCCTGTATTTTGATGGCTCAAGAGCTTGAAATGTTGGCTGTTGAGTACGAAAAAAATGCAATGATTGTAAAGGTCGACACTGATGACGAGTATGAATTTGCTCGTGACATGCAGGTACGGGGTCTTCCAACATTGTATTTCATCAGCCCAGATCCAAATAAAGACGCAATTAGAACAGAAGGGCTCATTCCTATACAGATGATGAGGGATATACTTGATAATGATATGTGAGCCGTGAGTTAGGTGGAACAGAAAAGCTCTTCACAGCATGCAGTTTTGTTATTAGCTTCAGGTTAGGTTTCTGAGCCAATTGTCAGTCTGCACCTCGATTATGTTACTTCAGAGGCTATCTTAGATATATGTTTGTATTCTTTCCAACTGTAAGCTATTTTTTTGTTGTTGAATGGAACGAATGTAACCTTTATCAATGTTTTGATTAGCTTTGTTCAGTGCAAACTGCCCTGTTCTTGATGGGAGCTTCAAAGCTGTACTGTAATCTTCAATATAGTATTTGTTCAAGAGACTAAACCACGAGGCAAGGCGATGAGTATATTGATCTGACCAAAACTACCTAGCCTGAAATAACCGGATTTAAACCCAAATTATACAGAGTCTTCTTTTGCGAAATTGACATGAAATGAAAATTTTGTTGATTTAAATCAACCCTACCA ATGCAAATTCCAACAGCACCTCGTAGCATCAGCTCAGCTGCTTCAAATCTGTTCCTTTACTCCCCACCATTTCACCTTAATTCCTCTCTTATCAAACCAACAACCTTAAACTTCCCATTAAACCATAATTTACCCACTTCAATTTCAATTCCTACTTTAATTCCCACTAAAAAATTGCTCTGTAAACCCCCTTCTGCCAAACATGTCCGAGAAGATTATCTTGTGAAAAAGTTGTCAGCTAATGAGATTACGGAGCTTGTGAGAGGGGAGAGAAATGTGCCCCTTATTATTGATTTTTATGCAACATGGTGTGGCCCCTGTATTTTGATGGCTCAAGAGCTTGAAATGTTGGCTGTTGAGTACGAAAAAAATGCAATGATTGTAAAGGTCGACACTGATGACGAGTATGAATTTGCTCGTGACATGCAGGTACGGGGTCTTCCAACATTGTATTTCATCAGCCCAGATCCAAATAAAGACGCAATTAGAACAGAAGGGCTCATTCCTATACAGATGATGAGGGATATACTTGATAATGATATGTGA MQIPTAPRSISSAASNLFLYSPPFHLNSSLIKPTTLNFPLNHNLPTSISIPTLIPTKKLLCKPPSAKHVREDYLVKKLSANEITELVRGERNVPLIIDFYATWCGPCILMAQELEMLAVEYEKNAMIVKVDTDDEYEFARDMQVRGLPTLYFISPDPNKDAIRTEGLIPIQMMRDILDNDM Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo03785.1 vs. NCBI nr
Match: gi|902203718|gb|KNA14657.1| (hypothetical protein SOVF_105460 [Spinacia oleracea]) HSP 1 Score: 362.5 bits (929), Expect = 4.400e-97 Identity = 180/181 (99.45%), Postives = 180/181 (99.45%), Query Frame = 1
BLAST of Spo03785.1 vs. NCBI nr
Match: gi|731378652|ref|XP_010668233.1| (PREDICTED: thioredoxin-like protein CITRX, chloroplastic [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 288.9 bits (738), Expect = 6.200e-75 Identity = 152/187 (81.28%), Postives = 155/187 (82.89%), Query Frame = 1
BLAST of Spo03785.1 vs. NCBI nr
Match: gi|702425702|ref|XP_010067721.1| (PREDICTED: thioredoxin-like protein CITRX, chloroplastic [Eucalyptus grandis]) HSP 1 Score: 242.7 bits (618), Expect = 5.100e-61 Identity = 116/125 (92.80%), Postives = 119/125 (95.20%), Query Frame = 1
BLAST of Spo03785.1 vs. NCBI nr
Match: gi|604334101|gb|EYU38290.1| (hypothetical protein MIMGU_mgv1a012971mg [Erythranthe guttata]) HSP 1 Score: 241.9 bits (616), Expect = 8.700e-61 Identity = 125/166 (75.30%), Postives = 138/166 (83.13%), Query Frame = 1
BLAST of Spo03785.1 vs. NCBI nr
Match: gi|848871744|ref|XP_012836436.1| (PREDICTED: thioredoxin-like protein CITRX2, chloroplastic [Erythranthe guttata]) HSP 1 Score: 241.9 bits (616), Expect = 8.700e-61 Identity = 125/166 (75.30%), Postives = 138/166 (83.13%), Query Frame = 1
BLAST of Spo03785.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R7C5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_105460 PE=4 SV=1) HSP 1 Score: 362.5 bits (929), Expect = 3.100e-97 Identity = 180/181 (99.45%), Postives = 180/181 (99.45%), Query Frame = 1
BLAST of Spo03785.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B4M5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_015280 PE=4 SV=1) HSP 1 Score: 288.9 bits (738), Expect = 4.300e-75 Identity = 152/187 (81.28%), Postives = 155/187 (82.89%), Query Frame = 1
BLAST of Spo03785.1 vs. UniProtKB/TrEMBL
Match: A0A059BJ55_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G03224 PE=4 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 3.600e-61 Identity = 116/125 (92.80%), Postives = 119/125 (95.20%), Query Frame = 1
BLAST of Spo03785.1 vs. UniProtKB/TrEMBL
Match: A0A022RHC5_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a012971mg PE=4 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 6.100e-61 Identity = 125/166 (75.30%), Postives = 138/166 (83.13%), Query Frame = 1
BLAST of Spo03785.1 vs. UniProtKB/TrEMBL
Match: A0A151RTY8_CAJCA (Thioredoxin OS=Cajanus cajan GN=KK1_032439 PE=4 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 1.500e-59 Identity = 118/149 (79.19%), Postives = 128/149 (85.91%), Query Frame = 1
BLAST of Spo03785.1 vs. ExPASy Swiss-Prot
Match: CITRX_SOLLC (Thioredoxin-like protein CITRX, chloroplastic OS=Solanum lycopersicum GN=CITRX PE=1 SV=1) HSP 1 Score: 232.6 bits (592), Expect = 3.300e-60 Identity = 119/165 (72.12%), Postives = 140/165 (84.85%), Query Frame = 1
BLAST of Spo03785.1 vs. ExPASy Swiss-Prot
Match: CITRX_SOLTU (Thioredoxin-like protein CITRX, chloroplastic OS=Solanum tuberosum GN=CITRX PE=3 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 2.100e-59 Identity = 120/173 (69.36%), Postives = 139/173 (80.35%), Query Frame = 1
BLAST of Spo03785.1 vs. ExPASy Swiss-Prot
Match: CITX2_NICBE (Thioredoxin-like protein CITRX2, chloroplastic OS=Nicotiana benthamiana GN=CITRX2 PE=1 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 8.100e-59 Identity = 119/171 (69.59%), Postives = 140/171 (81.87%), Query Frame = 1
BLAST of Spo03785.1 vs. ExPASy Swiss-Prot
Match: CITRX_ARATH (Thioredoxin-like protein CITRX, chloroplastic OS=Arabidopsis thaliana GN=CITRX PE=1 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 6.900e-58 Identity = 107/143 (74.83%), Postives = 122/143 (85.31%), Query Frame = 1
BLAST of Spo03785.1 vs. ExPASy Swiss-Prot
Match: CITX1_NICBE (Thioredoxin-like protein CITRX1, chloroplastic OS=Nicotiana benthamiana GN=CITRX1 PE=2 SV=1) HSP 1 Score: 223.4 bits (568), Expect = 2.000e-57 Identity = 122/181 (67.40%), Postives = 140/181 (77.35%), Query Frame = 1
BLAST of Spo03785.1 vs. TAIR (Arabidopsis)
Match: AT3G06730.1 (Thioredoxin z) HSP 1 Score: 224.9 bits (572), Expect = 3.900e-59 Identity = 107/143 (74.83%), Postives = 122/143 (85.31%), Query Frame = 1
BLAST of Spo03785.1 vs. TAIR (Arabidopsis)
Match: AT1G43560.1 (thioredoxin Y2) HSP 1 Score: 63.9 bits (154), Expect = 1.100e-10 Identity = 35/106 (33.02%), Postives = 56/106 (52.83%), Query Frame = 1
BLAST of Spo03785.1 vs. TAIR (Arabidopsis)
Match: AT1G50320.1 (thioredoxin X) HSP 1 Score: 63.2 bits (152), Expect = 2.000e-10 Identity = 37/140 (26.43%), Postives = 65/140 (46.43%), Query Frame = 1
BLAST of Spo03785.1 vs. TAIR (Arabidopsis)
Match: AT5G60640.1 (PDI-like 1-4) HSP 1 Score: 57.0 bits (136), Expect = 1.400e-8 Identity = 25/71 (35.21%), Postives = 43/71 (60.56%), Query Frame = 1
BLAST of Spo03785.1 vs. TAIR (Arabidopsis)
Match: AT3G15360.1 (thioredoxin M-type 4) HSP 1 Score: 55.5 bits (132), Expect = 4.100e-8 Identity = 24/89 (26.97%), Postives = 48/89 (53.93%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo03785.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo03785.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo03785.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo03785.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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