Spo03803 (gene) | SpinachBase

Overview


Name	Spo03803
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Pre-mRNA splicing factor PRP38 family protein
Location	chr3 : 37401818 .. 37414925 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCAGGTTTTTGGAGGTTGTGCCCAAGGAGCTGAGAAGTTTACTCCAGTGGCCGATCCTCTAACACTAGAAGATGAAGTATATGTTCCTTCTCCTCCCATTGGCCTGTCTTCACATCTTAATGATTTTGATGAAGTGGGTTCTAATGTGGGAAATGAATGGGATGGGATGTGGAAAGAACATAGACCTTCATCTCCCACTCATCTATCTACCCAAAATGAAAATACTGATAAAGGTAAAGGGAAAAGGGTAATGGAGAGTGGCTCATCCCAAAGCAACAAGAGTGCTAGGACTGAAAGTACTAGAAAATCTAGAGGGAGTGCTGCACTTTCAGATAAGATTGATGGCATGGTACAAATGATTGCCGAGAGGAATAATTCAACAAAAGAGTTTCAAGTTGCGATGGTGAATATGATGAATTCTATGAATATTGCAACACCAAAATATAGTGTGACCGAGGCTATGATCAAGTTGTGTGCCATGACCGATTTGGATTCCACCTCTCCTGAATTTTACTATGCTTGCACACTAATTGAAGATTCACAAAGAAGAACTATACTTTTAGAATTCCCGGATGACAAGAAGAGAGTTGAATACATCCGGTTTATGTATGCACAAAATATGGGACGCAACTAATATGTGTTGACCTTACCAACTATGTAGGATTAGATGTGCAATTTAGGATTGTGTTCTTTCCCCACCCCCTGTAATTTTTTGGATATGCAACAAGTATGAAGTGGGGTTACTTTTGCTTTTCCCTATCCCCTGCAAATATTTTGATCAAGAGAATTGTATTGATATAAACAGGGTAACTTTTCCGAATGATATAATTCATCCATATTTTGTAACATCTAAATATTATGTAATACTATTAATTATATTGTATAATCTTTTGGAATGATTGATATTGACTTAGAAATTAACTTATTTCTTTGTAGGTATACATGGATTATAATATGCAAATTCGAATGCTCCTCTTATGTAAGGAATACATGGATGAAGAGGATACATTTTGGGATTTGATGGCTTGCATAATAGGTTGTATTAGCAAGTATTACTTAAATCATATTTATAAGGTACCATGCATGACCTCATATTTTACTGGACAAAGGTGGATGATTGAATTATTAAATGGTCATGAAACACGATGTTTTAATGATCTTAGAATGTATCCTCCTTTGTTTATGCAATTATGCACAGATTTGGAAACTAGGTATGGTTTGAGGCCATCATATCGTATGTCGATTATAGAAAAAGTAGGCATATTTATTTATGTCCTTGCTCATGGTGCCCCAAACAAAATAACTCGGGAACGTTTCCAGCACTCTGGAGAAACTGTGAGTAGAGTATTCAAAGAAGTATTATATGTTATGGATGGAATGTCTAGGGATATACTTGTACCTAGAGATCGAGATTTCAAGGAGGTGCCGCAAAAGCTAGCTAACGATGCTAGATACATGCCGTACTTCAAGGTAATTGAATTTTCATTTTCATTAATCATTTAAAAGCTCTCTTAAATTAATATGATCGATCCCAATTTTTTTAGGATTGTATTGGAGGTATAGATGGAACACATATATCAATAATTGTTCCCGAAGAGGATCAAATACGTTATAGAGGAAGGAAAGGGATACCAACTACAAATGTTTTAGCGGTATGTGACTTTGATTTGTTGTTTACATATGTCTTAACTGGATGGGAAGGTTCAGCACACGATTCTCGTATATTTCTTGATACAATCGGTGATCCAAGACTCAAGTTTCCAAAACCACCAGAAGGTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTACTTTCATTTCTTATGGCTTACTTTTTTTATAAAGGTTTCTTGTACTCAATTTTTTAAACGCAAATTAATTATAGGTAAATACTATGTTGTGGACAAAGGCTATCCAGAAAGAAAGGGATATTTGACACCTTATCCTAAGACGAGGTACCATCTATCGGAGTATCGTGGTGCAAATCCGAGAGGTATCAAAGAAGTTTTTAATCGTGCTCATTCATCCTTGAGAAGTTGCATTGAAAGGTCATTTGGTGTTCTTAAAGCTCGATGGAAGATTCTAGATAAGGTTCCTATGTACTCATTCAAAGATCAAAATAGAATAATATGTTCTTGCTTTGCATTACACAACTATATTAGACGAAGTAGTATTGGCGATCCGGCTTTTAGACTCGTGGATAGAGATCCTAACTTCATACCCCCCGAGGGAATTGAGGATGTTGAAACTAGTGTCCCTCCATGTGTTCAAGAGTCGTCAACTAGGGAAATGACAACAGTTCGCGATAACATTGCTGCTTGTTTACTAGAAGCTAGACGACTAAGGAGACTTAGACGAGTACATTAGATAATTTAGATTCTTATGGGTTTTTATTCACAAGTTACATAACTTAGATACTTCATGCTTTGTTCACTTTAGATTGTATTAGATTGTATTACGACAATCTATTTATTGATTATTTGTACTTCTAATAAAAACACTATTTCTCTTTTTCTAATTCACTATATATATTATTATCACTTACTTTGCTAAACAAAAATAATAATTATATTATGGTATAATATTTTAATGAAATAAGTAATAAATAGTAATAGTATTTATTGTTGTTAATATTTATTATTTTATCGTTATGGTTAATAATTTTATATTAACATTATGAAATAAATATATAATACTAATAGTAATAATAGTTACAAAAAGTAAAATGGCTTATGAAAAGAAAAATATGTTACAAAAATACATAAAATAAACAAATGTCCTTAAAGGTCATTTTACATGAAACAGCTAATAGCCAACATTCAACTTTACCAAACACATTTTCAGAAAATCTACCGTCAAACAGCCAACATAAAAAGCCAACACAAACAGCCAGTCAAACAAGCCAAGTGAAACAGCCAACAACCAACCGCCAACAGCCAATTGCCAAACAGGGCCATAATCTATTTACACCCATCCCCACACCCATTCCCTAACATGACATGGTCCCTACTTATTTTACTTATTAAAATATCTACCTAATCCCACTTATTTTATTACTTTATTTCATTCAATTCTTTTTTTAATACCTGTGTCCGAACAAGTGTATCTTTTAAATAAATATATATGGAGGGAGTATAAACAAGATTTTGATTTACATTTGAAGTCGTGACTTGAACACCTTGTACAGTCAAATGGGAATTTTAGCGTAGTGAGAGAGTATTAAACTACGGGAAACTAGTTTTCTCTTGAAACTCCAAATCGCATTGTCGCAGTGAGCTACATCTCCTTCCTCATCTTAAAACCCTCCAACAAAAGCAGCATCTTGAAGTTTTAGCTGTATCTCTAGTCGGCGGCGCCTCAGCCAACCACCTCTCCTTCCCTGCTCCTCCTATTCTTGGTAATTATCTACAAGTATTTTGTATCGATTTTTCTGTTGATTATTTTTGTATTTTTATTGATTAAAAAATGTAATTTCTAAATTGTTACATATATTCTGTTAGGATTTTTGTTAACTTTTATGTTGGTGTTGTGAAATTCGTATTATCCTGTTTGATATGATTTGATTTTTCTGCTATGATAGGTTTCAAATTGTTAAATATATTCTGTAGGGTTAGTTTTGGTGTTGTTTTATGTCTAATTAGTCTATACCCACTTCATAATTCTACTTGAAATTCGTATAATCGTTTTTGATATGATTCGATTTTCTGACAAACACCGTACATCTTTCCCCAGGGCGGGCGCCCCTCCTGTCCTGGCTCAGGGACGGGCCTGTTGGCAGCATAAGTTTACCTGGAAAAAAAGGGATTGATTTGTTTGATAAATACTCAGTTCACCTGGCAAAAGGGGATTGATTTGTTTGATAATTACTCAGTTCACCTGGCAAAAGGGGATTGATTTGTTTGATAATTACTCAGTTCACGGGGATTTTTTTTTTTTTGATAATTACTCGACCGTCTCCATGGGGGATATACAATTATCAGGAAAGCCAATTGAATCTCTCTTTGAGAAGGTCCTGTGTATGAACATTCTTTCTTCGGATTATTTCCGAGATCTTTATCGTTTGAAGACTTACCATGAGGTGATCGATGAGATATACAATCAAGTTGATCACGTTGAGCCATGGATGACCGGAAACTGCCGGGGACCTTCTACGGCCTTTTGCCTGTTGTACAAGTTTTTCACCATGAAGCTAACTGTCAAGCAAATGCATGGGCTACTGAAGCATCCTGATTCTCCTTACATACGAGCTGTGAGTATTCTGCTTGTTTTCACTCTCTTCAGACTCTATGCTTGTTTTATTAGCAAACTTCTGCAGCGTTGTTTTTTCAGAATTTCAACATCAAAATTTATATTTGGACTGAGCAGAAGGAAACTTAGATTTCACGATTCGCAAGAATAATTTTTCATGTTAAGTTTCTGCTCGAAGGTACTAGCATGACAAAGCAGACTCAATTACTATTATCTACTATCTAAATGTGTTTTGCTTCATGTAGTTTAATGAAGGGATGAGATTATTTTGAGTTGAAGTATTTGCAAGACTTATATCCATTATCTTTTTCAAAACTCCTGGTTAGTAGAACTGTAGGAAGCGTAGTTATTGACTTATTGAAACTTGGAAAATCATGATTTAGGTAGTCTTAGTAGAAACTCAAGAAATGTTGTGACTTGTGAAGATGATAGTTTCGCTTCTATGCTTTAGCAATTTTGTACTTGGTATTAATTTGGGGATTTCCATTTAATGGTTATTTCTGTTCATCGTGTGTTGCATCTTCCTCAAGATGCTGTTATCTGGTATACTGTGATGAATGATTAAGTTTGTCTTGCAGGTTGGTTTCCTATACCTTAGGTATGCTGCAGATCCAAAAACATTGTGGAGTTGGTTTGAACCATATATTCAAGATGATGAGGTACTGCATCTGTCATCTTCTAGCTGTTTCAATTCCCCTTTCCCCACATCTCGTTTCCATCTGCTCTATATACTGTGGACAACTCTTCTTTTGAGGCACTTTTGACTTCATGCACAAGTCTGTAGCAGCTGAGGCAAATATATTTTGCTTCTCTATTACTACTTTTATGTTTATTCCTTTATAGAACACATTTTCTTGATCTCTTTATGTGCTGAAAGCCTGAAATGATTCCTTTCTAAAATACTTAAAGTTGCTTTGACATTCATTGCTGACTTCCTGATTGTTTCTAGGTCATTTACTACTCAAATCTGATTGGACCTGATCATTAGCACTTAAGTTTCAGAGATGTGGAGTAATTTAATTGGTTTTTGATGCTATATTTGATAATAATTTTTCAACAGAGTATTTGTACCATGGGTAGGAGGGGACCAGCCGACCAGGGGTCTTATTTCCACCCATCATCACTTCTTATATTTTCAATTTTGATTTTGTTCTCATATTTTGAGATAACTTAGTTTGGGGGAGGTCCACCTTTTCCTCTTTGGGGAAGAGGAAGGGTTGTGACTTGTGACCTGTGAGAATGCTTTGGCAATTATGAGCCAGGCCAAAATTTGATGCCTAAATCTTTGATTCAGACGAGCAGCCCTGCTCAAACTGGAGTTATGGAATGCAGTGTCCAAGCTTCCTAAGTGCAGCCATGACTCAAATTCGGGTTTGAGAAAATTTTACAATAATGATTGGAGGATATCCTATTATTCTTTTAGGTGGAAAAGACACCTGTCTTTCATTGTTCTGAGGAAGTCAGAAGGAAACTCTCTCAAGAACTCTATGCTTCGAGTACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNCCCCCCCCCCCCCCCAAGCTTCTGATCACTATTCATTTCCCATTTTACCACTTAAATTCAGGATCTGTTTTATGGGCTGTTACAAATTTATGGGATTTGTTTTCAATTTCAAGTGGTATTTAGTGTTTGGTGGATTATGTTTTCTCCCTGGTTTATTTTTTTTGGGGCTTCTTATCAGATTTATGTGTGGTTATGGTTGTTTTTGACATGAGATATTGATCTCCTTCTTCGGGCTGTGGAGGATACTTTTGTTGTTAGGCGAGATCACAAGGTATTGGATATTTTGTTCTTGTTTTGATGTTTTTGGCCGTGTTCTCTCTCCCTAGGAATGCCATTGGCAACTTATTTTTAAAAAAGTGTGTTGTGGCACCGGGAGGCTTTTTTTTTTGTCTAGGCGAAGTGGTGTTGATGAAGCACACCTAGGTGCACAACTTATTATTCACAAACTTTTTTACTATTTATAAGTGTGCCTAATTAGTGAGGCTCATCGAGGCGCGCCAAAGGCGAAGAGAAACCCCAATCACCTTGGTGTTCATTGAGCCTTGTTACACATTTCCACTCTGTTACCCGGACTGGAAAAAAGTGCCCACATACACGTGTCGACACGACACTGACACGGGTTTTTTCACTCAGACATGGCTGGTTGAGGAAGACATAAATAAAGACACAGGTAGAGGGGAAGGGAAGGGAAGGGAAGGGAAGAGAGAGAGAGATCGCATCGAGAAGTTATCAATTTCATAGCACCTTTTTTTCTCTCCTCTTTCTTTCACGTGGCTGGCGGCTGACTGTAAGTTTGTCACTGTGCTTTAGGGTTAGATTATCTCATCAGGGTGGTTTAAAACAATATTTGGGCTTTGTATTTCTTATTAATTATTGGGCTTTTGTCTACTCCTTTTCTTATAAGATTTCCTTTCTATGTACTGTAGCGCCTAACAAAAAGAACAAGTAACTTGCAGCGAAGTCCAAATTATTAATTTCATGCCTTTTGCGTTAATTAAATTAAAATGATGATTTAAATAAAAAATAAATATTTTAATAACCAATAATTGTCGTGTCCCTGTACTTGTATCCGAATCTCTGACAGAGTACACTGATCCGTACCCATGTTCGACACTCCTAGACGAGTCAAGGTAACATAGCAGTTCCATTGATGTGCTACTATCCTATGTTACTCGGAATCGTGTACTCTTGTTCTACACTGGTATATGTGAACACAACTATTTTGGAAGTTTTCATGATTTTTGCCCAAAATGAAGTGTCCACTTCTCCTAACCATGCCGGAGTGTGGAGGATCCGACATTGGTACTCGAGGTGAAAAAAAGAGTCATGAGTAAGATAGCTAGTGGATAAAGAACCATCATACAATTCACTTTGCTGTAAACTTGTAATAAAATAGGAAATAAAAAAAAATAAAGATAATGAGATGAAGAAGAAAATTATTGAAGAACGATGTCCGATTACATTTGATGTGATTAACTCACCGGATAGAGCATACAATCCCAACGAACAATCCCATTTTAAGTGGCTTGACACTTTCACTAAGAAAAAGCTAAACTCTCATCAATATTCATCATGCCTTCTCTTTCCCTAAACTCCTGTACTTATAGACTAACTAACTACCCTCTTCTTGTTGCTCAAGCTACACACATCTGACTTATTATGACACTTTCTAATGTGCCTTTCCTATATGGGCTATATCTGATGCATCCGTCTGTTGCTGGAGGTTTTCCTTTGAGATCATATTTTCAGACTAAGTATTGACTGTGAGGTTTGGTGCTCTATGTCAAAGGGTTTTATGTGACCGTACAAGGGTGTGGTGTTTCTGTGTTTGGGGTGGAATAAAAATAAATTGGTTGTCTGAACTTTGTATGCACTGGTATATATTATTGGCTATTGCAATAGACATATTAAGTTTTGACTTTTGGATATCTTTGAGCTTCAGCTCCATGATTTGATGACGCTTGAAGTTCACATTTTGCTTATGAACCTCTATTTTATGTGTGGAATGTGCGCTTTCTTTTAGTAGTATTGCATAATTTTAATGTCGTGGCCTGACATTTACATTATTATTGAAAGGTGGATCCTAACAAGAGATAGGTGACCATAAGGAATCCAGTGACTGGAGATGTAATAAAAGGTTTTGGTGGCTATCAGTCATAATACCGGCCTCGTCCTACACTTCATCTCTCCTATTCCATTCCATCTACACCTTCACCTTGTTGCTCTTAACTTTGTTAAAACACACATTTTCTCATGTAGTTTATCTAAAATATTGTTTCTAGAACTGGTGTTGGATATGTGAAAAAAGAGGAAAGCCATTTAAGATTTTGAGGAAAATTGAATCTCAAACCCCCCTCATATGTCACAAGATAGAAAGGATTCATGTTTCATCACAAGATTTAGCCAAAATCAGGCGTATTTCTAGGGCAAAACAGTGTCAGTCCTAGGTTCCCATTTGTGGGTGTTGGGCAAAACAGAGAGTTACTGTCTCAAAAGAGTGAAATGGGCAATCTAATTTCATGTATTTTGCAAACCCTTTTGGTATATTTCTGCGTTTTAAAACCAGCCCATCTGTTATTATGCAATCACAGTAGAAGCCATAGCAAAAGCATCCTAACTTTTGACCTCTGGGGGGCTCTGAGGTGATGAAATTGATGAACTGGTAGAAGACATCATCAGACTGGAGGCATTTTGGGGTATTTAATTATTTTGCATCTCTGGTTACTGGAAATTTTATTTAACCAACTTTATTGGTGGACCTACAGCCTATACGCCACCTCTTTATAACTATGTAAACATAGGGCCACCACACTGTAATTATATACCTCAAGGCTCATAGCCATCAGTGTGGTGGACTGAATTTTCCCATAAATGTAGAAGTTTTGTCTCCAGTATGTGTTTGTGAGTTTGGTTATCTTAGATTTGGCTCATTGGTTTTCTGAGCATCAGTGGTGTGTTTGGAGCATATGTTCCTATATTCTTCAATAAATAAAAAGTTTTGACTCCTTTTTTCTTCAGTTTTTGGAATCTGCTCAATCCACCACCACCCAATGGTCTTGCTGTTTCTAGATTACCTCTTGATGTGGCTCTAGGATTACAGGTGTTTTTATGAATTTGCAATTGGGTAGTGGTGGTTTAGTGTTTGAACTTGTGGGGTATTTGGTATTCGGGGATGGGAGTGTGGGATTTTGACTTTTAAGGGTGGGATAGGATAAGAAATTGGTGATTGAGAATTCATGAAAATATTGCAAATCCCTTGGTTGGAAGGAATGGCGAATAGATTGGGTATAAACAAAGTAATTACCCTAACATCCTTAGTAGTATCCTTCTCTTTTCACTTCATTAATGGCATTTTACCCATTTTAGCTCTCTCAATACCCTTTTTCTACTACCTATTATTTGGAAGGTTGGAATTCAAGCCTCTAACTCCTATTCCCCTGCCCACATTCAACTCCCGTTCCCCTAAAAAACAAGGCATTTTGCAAAAAGAGAACTGAACTCCCAATTTCTCTTCCAATTCCACAAAACCAACGCCCTGATGAAGTGAAGATTGTCATACCTTTCACTTTCACTATTCCACATAACATCTTAAATAATAATGTTAAAACATTTTGTATCTACTGTCTCTTTTGAACAGTCAGCACTATGCTTAAGATGTTTATATCTCTCCCCTTGACTGTCAGAACTATATTCACGGGTTGCCGTAGTCACTCATAACCCCAGGGAATGCGATAATTTTAATTCTTTAGGTGTCTCTGTAAGGCGCAGTCTCTTGCTCAACATTCAGCATGCACAAGATCTCTCATCTTCATGAGATCTCTCGGATTATGCAATAGCATTTAGTCCCTGGAGTTCATATTGCTGTATTCTCTATTAAGTTTGGCTCACATCCACACCATAGAGTAATACTGTAATAGTAACAATAGGAGCGACAGTCAATGTTGTAATTTGGTGTTTGATATGATGATGTTTGTTTCATGAGCTTTTTTTTTGGTATCTACATCGTGAAACAAGAAGCTAAAAACCTTACATAGTGGCCATCACATATTCACATCAAGTAGCAGCTGCCATTTGGTGTAGTTGTTAGGGCTTTCATTGTTGGTTGGTCCATTATTATGTGTTTGACCATGAGGTTTTCATAAAATTGGCCATGATACATTCGATGCTGTCCATGTGTTATGAATGACATACAGGCAGAAAAAGGGTTTGCATTACAATTTTAGTCTAAATGCTTCTATCAACTTCACAGCCTTTTTCTTGAAGGCAAATAGCAACCTGTTCTTTGTTACTGATTTTGTTTAAAGATTTGACAGTTGCAGTTTCATCAACAATGAGGTGGTTGGGTGCATTATTCATCCCAAGAATGATAAGGTTTTGCCATGTGCTCAAATATAAACACCCCCATCTTTCGCGCTAAGTGATTATTTTTTATATTGTGTCTTCTTCTTGGTTACTTAAAAGAAGAGGAGCGGAGATTACAGAGATCTTGTTATTCTTTGTTATCTTTTATTGATGCTTTTGTCACCCCCTGCTCCCTAGTTCTTTCGTGTTAATCAGGCTTTGAATTAAGTTTGGTTCTATTGCAGGAATTTTCTCCAGGATCTAGTGGTAGGATGACCACAATGGGTGTGTATGTGCGGGACTTACTTCTTGGACAGGTAAATAAACTTGATTATCATTTGTATGTAACCACCATTGTCTAGTAACAAAATGGGTGTTTCCTTTGTGCTATGCCTTGAGAGACCACATCCTTCACTTGGATATATGCTTAGATAACACCTCGTTAATTCTAGTCAATGTTTCTGTTAGGAATGCATTGTTTGGAGGAATTCATCAGAGCAATGCTATCTAGCTAATCTACATGCTGGGGTGGTATATCCAACTGGCCAGTACCTCTGGGCTCTGGATGTATCCTACTTCTACTGTCACTTTGAAAAAATGTATAAAAACCTACTTCCCCGGTTTTTTTTTGTAACTGTACCTTCTGGTATCGGCACACGATTTAAGGAAGGTAGTAAAAGGTGGGAGATACCAAAAATGCCCAAGTGATTACAAACAAAAGAGAGAGTTGGGTTAAAATGGTAAATATAAAATGTGTACAACGGTAGAATTGATATTTGGTTTGTGAACACAATTAAAAAGTATGTGAAAGCGTACATAAATTGAAATGGTTGCAACTTCCAAATAAGGCAAATGGTGCAATTATATACGAAGTATATATGTATATATAAGAAAAAGCAGAGGAGTATGTTATATGTTGACATGCGTAGGTGTCACTTTGAGTAGATTTGGGTTATTTCTCCAGTGCCATCTGCTTATTACGTCTTTGTGAAGCATCAGTCAGAAACAATGCTCTCAGTGTCTCCCTCTGGGCATCATTTCTTTTAATGTGAAAATTTGTGAAAATGATTGTCCACTTCTCTTAAGTACGTTCATTTTACTCTTAAGCTGAACCATTATTAGTGAATGTAATGATTAGTTTTTCTTTTGTTCCACAAAAGGTAATTATTATAAATTTTGTCCCTTCAATTGTTTTACTCTTTACTCTAAAGTGAAATAAATTTTTTGTAAACTAATTTGAGGTAAACTAATTTGACTGTGTGGGGGGTAATTCTCTAAAGTGAAATAAATGAATTCACAACAATTTGTAACAATGATGACGATTAATAGGCAAATATTGATTTGTCATTTGTATGATCAACGTGCATATGCTTCTCTCTAAAACTATAGGGGGGAAATAATTTATAGAGAGTATATTATTAATTATTCTTATGGCCTTGGGCACGTGATTCATGTGAACTTAAAGCAGAAGGAATCCCACTGCCAAAGAAGGGACAGAAAACCAGTTTCTTATAAAATTATGTCTACATGCTATAGCTTAGTGGAATTTTCAAAGAATTAAAAGTGCTTGGTTTCTGTTGTTGTCCTTTTGTTTTTAAGGTATACTCTGACAATGGAATTCAGCTCACTTTCTACTTGTTAATGCAGTATTACTTTGACACCCTTTTCCCCCGTGTACCTGTACCTGTAGTGCGGCAGATTGTTTCCAACCTTGAAAAGATGAATCTCCCATCGAAGTCATCAGGGTCAATAGGAGAGAACAGTCGACTTGGATCAGAAGATACTGCACGTCGCCCTCCTTCTGTTAAGGCTGCTCTTTCTGTTTCTTTTGGACAACGTGCTCCGCATCGGGCATCAACTAGAGACTCCTCTCCTGTTCGTCGTGCTGTACCTACACCTCCTCATGACCGAGGTGGTAGAGATGATTCTCGGAGGTCTCCGAGCAGGCATCGTAGTCAGAGCCGTGACAGAGATTATTCTGACAGGGATGTTGGTAAAGGGAGGAACCATGATCAGGATCGAGATCGCTACCGGGACAGGGACAGAGAAAGAAGTCGTGATTATGAAAGAGACAGAGACCGCAGGCGTGATTATGATGGAAGCAGATATTGTGAAAGGGAGGGAATCAGAAGGGGAAATAGAGACAATTATAATGATGACCGCTCTCGTAGGAGCAGGAGCAGGAGCAGGAGCAGGAGCAGGAGCAGAAGTCGAAGGTCTCCATCTCCTGGTCGTAGTGAACGCTTAGATCATTATTCAAGCACTCACAATGATAAAAGCAAAGAAAAAGAGAGAGCTACAGCATCAACCAATCTGGCTAAGCTTAAGGATCTATATGGTGACTTAGGTAACCAGAAAGGTGATGCAAGCATGGAAAGAGCCTACACCAAGGATAGCGGTGCTGAAGAAGTTATTAGATTAGGGGGTGCTAGATGGAAGTGATGTGCAATTTACTATGCCAATTCAGTTGACAAACACTCTCTCTCTTTGCTAATTCAGTTGTCTAGGACCAGATAAACATCCAGATTTTTCTCTCTTCTAACAATTGTGATGCCATTCTCTGTTGTATATTAGATGTTAGTTCTAGATTTTTCCATTAATTCACGCTTCACTGTTTTATTCCATTTATAAGTTAAGTCTTCTTATTATTTAGCACCACTGATACTCGGACATTAATTTTCCTTATACTTGTATTAGTGATAGCACATTATGCATTCTATAAACACAGTAAAACAGTAGCCTTGTGGTCATCATGAGAGTCAGTAGGGATTTGTTGAGACGTATATAGCCAATGCTTTCTAGATTTTAATTGTATATCACAATGATAAATACTGGGGAGAACATTTATTTGGTACGGAGTAGATAATTTGATATACCTGCA

mRNA sequence

ATGGATCAGGTTTTTGGAGGTTGTGCCCAAGGAGCTGAGAAGTTTACTCCAGTGGCCGATCCTCTAACACTAGAAGATGAAGTATATGTTCCTTCTCCTCCCATTGGCCTGTCTTCACATCTTAATGATTTTGATGAAGTGGGTTCTAATGTGGGAAATGAATGGGATGGGATGTGGAAAGAACATAGACCTTCATCTCCCACTCATCTATCTACCCAAAATGAAAATACTGATAAAGGTAAAGGGAAAAGGGTAATGGAGAGTGGCTCATCCCAAAGCAACAAGAGTGCTAGGACTGAAAGTACTAGAAAATCTAGAGGGAGTGCTGCACTTTCAGATAAGATTGATGGCATGGTACAAATGATTGCCGAGAGGAATAATTCAACAAAAGAGTTTCAAGTTGCGATGGTGAATATGATGAATTCTATGAATATTGCAACACCAAAATATAGTGTGACCGAGGCTATGATCAAGTTGTGTGCCATGACCGATTTGGATTCCACCTCTCCTGAATTTTACTATGCTTGCACACTAATTGAAGATTCACAAAGAAGAACTATACTTTTAGAATTCCCGGATGACAAGAAGAGAGTTGAATACATCCGGTTTATTGAGCTACATCTCCTTCCTCATCTTAAAACCCTCCAACAAAAGCAGCATCTTGAAGTTTTAGCTGTATCTCTAGTCGGCGGCGCCTCAGCCAACCACCTCTCCTTCCCTGCTCCTCCTATTCTTGGAAAGCCAATTGAATCTCTCTTTGAGAAGGTCCTGTGTATGAACATTCTTTCTTCGGATTATTTCCGAGATCTTTATCGTTTGAAGACTTACCATGAGGTGATCGATGAGATATACAATCAAGTTGATCACGTTGAGCCATGGATGACCGGAAACTGCCGGGGACCTTCTACGGCCTTTTGCCTGTTGTACAAGTTTTTCACCATGAAGCTAACTGTCAAGCAAATGCATGGGCTACTGAAGCATCCTGATTCTCCTTACATACGAGCTGTTGGTTTCCTATACCTTAGGTATGCTGCAGATCCAAAAACATTGTGGAGTTGGTTTGAACCATATATTCAAGATGATGAGGAATTTTCTCCAGGATCTAGTGGTAGGATGACCACAATGGGTGTGTATGTGCGGGACTTACTTCTTGGACAGTATTACTTTGACACCCTTTTCCCCCGTGTACCTGTACCTGTAGTGCGGCAGATTGTTTCCAACCTTGAAAAGATGAATCTCCCATCGAAGTCATCAGGGTCAATAGGAGAGAACAGTCGACTTGGATCAGAAGATACTGCACGTCGCCCTCCTTCTGTTAAGGCTGCTCTTTCTGTTTCTTTTGGACAACGTGCTCCGCATCGGGCATCAACTAGAGACTCCTCTCCTGTTCGTCGTGCTGTACCTACACCTCCTCATGACCGAGGTGGTAGAGATGATTCTCGGAGGTCTCCGAGCAGGCATCGTAGTCAGAGCCGTGACAGAGATTATTCTGACAGGGATGTTGGTAAAGGGAGGAACCATGATCAGGATCGAGATCGCTACCGGGACAGGGACAGAGAAAGAAGTCGTGATTATGAAAGAGACAGAGACCGCAGGCGTGATTATGATGGAAGCAGATATTGTGAAAGGGAGGGAATCAGAAGGGGAAATAGAGACAATTATAATGATGACCGCTCTCGTAGGAGCAGGAGCAGGAGCAGGAGCAGGAGCAGGAGCAGAAGTCGAAGGTCTCCATCTCCTGGTCGTAGTGAACGCTTAGATCATTATTCAAGCACTCACAATGATAAAAGCAAAGAAAAAGAGAGAGCTACAGCATCAACCAATCTGGCTAAGCTTAAGGATCTATATGGTGACTTAGGTAACCAGAAAGGTGATGCAAGCATGGAAAGAGCCTACACCAAGGATAGCGGTGCTGAAGAAGTTATTAGATTAGGGGGTGCTAGATGGAAGTGATGTGCAATTTACTATGCCAATTCAGTTGACAAACACTCTCTCTCTTTGCTAATTCAGTTGTCTAGGACCAGATAAACATCCAGATTTTTCTCTCTTCTAACAATTGTGATGCCATTCTCTGTTGTATATTAGATGTTAGTTCTAGATTTTTCCATTAATTCACGCTTCACTGTTTTATTCCATTTATAAGTTAAGTCTTCTTATTATTTAGCACCACTGATACTCGGACATTAATTTTCCTTATACTTGTATTAGTGATAGCACATTATGCATTCTATAAACACAGTAAAACAGTAGCCTTGTGGTCATCATGAGAGTCAGTAGGGATTTGTTGAGACGTATATAGCCAATGCTTTCTAGATTTTAATTGTATATCACAATGATAAATACTGGGGAGAACATTTATTTGGTACGGAGTAGATAATTTGATATACCTGCA

Coding sequence (CDS)

ATGGATCAGGTTTTTGGAGGTTGTGCCCAAGGAGCTGAGAAGTTTACTCCAGTGGCCGATCCTCTAACACTAGAAGATGAAGTATATGTTCCTTCTCCTCCCATTGGCCTGTCTTCACATCTTAATGATTTTGATGAAGTGGGTTCTAATGTGGGAAATGAATGGGATGGGATGTGGAAAGAACATAGACCTTCATCTCCCACTCATCTATCTACCCAAAATGAAAATACTGATAAAGGTAAAGGGAAAAGGGTAATGGAGAGTGGCTCATCCCAAAGCAACAAGAGTGCTAGGACTGAAAGTACTAGAAAATCTAGAGGGAGTGCTGCACTTTCAGATAAGATTGATGGCATGGTACAAATGATTGCCGAGAGGAATAATTCAACAAAAGAGTTTCAAGTTGCGATGGTGAATATGATGAATTCTATGAATATTGCAACACCAAAATATAGTGTGACCGAGGCTATGATCAAGTTGTGTGCCATGACCGATTTGGATTCCACCTCTCCTGAATTTTACTATGCTTGCACACTAATTGAAGATTCACAAAGAAGAACTATACTTTTAGAATTCCCGGATGACAAGAAGAGAGTTGAATACATCCGGTTTATTGAGCTACATCTCCTTCCTCATCTTAAAACCCTCCAACAAAAGCAGCATCTTGAAGTTTTAGCTGTATCTCTAGTCGGCGGCGCCTCAGCCAACCACCTCTCCTTCCCTGCTCCTCCTATTCTTGGAAAGCCAATTGAATCTCTCTTTGAGAAGGTCCTGTGTATGAACATTCTTTCTTCGGATTATTTCCGAGATCTTTATCGTTTGAAGACTTACCATGAGGTGATCGATGAGATATACAATCAAGTTGATCACGTTGAGCCATGGATGACCGGAAACTGCCGGGGACCTTCTACGGCCTTTTGCCTGTTGTACAAGTTTTTCACCATGAAGCTAACTGTCAAGCAAATGCATGGGCTACTGAAGCATCCTGATTCTCCTTACATACGAGCTGTTGGTTTCCTATACCTTAGGTATGCTGCAGATCCAAAAACATTGTGGAGTTGGTTTGAACCATATATTCAAGATGATGAGGAATTTTCTCCAGGATCTAGTGGTAGGATGACCACAATGGGTGTGTATGTGCGGGACTTACTTCTTGGACAGTATTACTTTGACACCCTTTTCCCCCGTGTACCTGTACCTGTAGTGCGGCAGATTGTTTCCAACCTTGAAAAGATGAATCTCCCATCGAAGTCATCAGGGTCAATAGGAGAGAACAGTCGACTTGGATCAGAAGATACTGCACGTCGCCCTCCTTCTGTTAAGGCTGCTCTTTCTGTTTCTTTTGGACAACGTGCTCCGCATCGGGCATCAACTAGAGACTCCTCTCCTGTTCGTCGTGCTGTACCTACACCTCCTCATGACCGAGGTGGTAGAGATGATTCTCGGAGGTCTCCGAGCAGGCATCGTAGTCAGAGCCGTGACAGAGATTATTCTGACAGGGATGTTGGTAAAGGGAGGAACCATGATCAGGATCGAGATCGCTACCGGGACAGGGACAGAGAAAGAAGTCGTGATTATGAAAGAGACAGAGACCGCAGGCGTGATTATGATGGAAGCAGATATTGTGAAAGGGAGGGAATCAGAAGGGGAAATAGAGACAATTATAATGATGACCGCTCTCGTAGGAGCAGGAGCAGGAGCAGGAGCAGGAGCAGGAGCAGAAGTCGAAGGTCTCCATCTCCTGGTCGTAGTGAACGCTTAGATCATTATTCAAGCACTCACAATGATAAAAGCAAAGAAAAAGAGAGAGCTACAGCATCAACCAATCTGGCTAAGCTTAAGGATCTATATGGTGACTTAGGTAACCAGAAAGGTGATGCAAGCATGGAAAGAGCCTACACCAAGGATAGCGGTGCTGAAGAAGTTATTAGATTAGGGGGTGCTAGATGGAAGTGA

Protein sequence

MDQVFGGCAQGAEKFTPVADPLTLEDEVYVPSPPIGLSSHLNDFDEVGSNVGNEWDGMWKEHRPSSPTHLSTQNENTDKGKGKRVMESGSSQSNKSARTESTRKSRGSAALSDKIDGMVQMIAERNNSTKEFQVAMVNMMNSMNIATPKYSVTEAMIKLCAMTDLDSTSPEFYYACTLIEDSQRRTILLEFPDDKKRVEYIRFIELHLLPHLKTLQQKQHLEVLAVSLVGGASANHLSFPAPPILGKPIESLFEKVLCMNILSSDYFRDLYRLKTYHEVIDEIYNQVDHVEPWMTGNCRGPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYAADPKTLWSWFEPYIQDDEEFSPGSSGRMTTMGVYVRDLLLGQYYFDTLFPRVPVPVVRQIVSNLEKMNLPSKSSGSIGENSRLGSEDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRAVPTPPHDRGGRDDSRRSPSRHRSQSRDRDYSDRDVGKGRNHDQDRDRYRDRDRERSRDYERDRDRRRDYDGSRYCEREGIRRGNRDNYNDDRSRRSRSRSRSRSRSRSRRSPSPGRSERLDHYSSTHNDKSKEKERATASTNLAKLKDLYGDLGNQKGDASMERAYTKDSGAEEVIRLGGARWK

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo03803.1	Spo03803.1	mRNA

Homology

[Close]

BLAST of Spo03803.1 vs. NCBI nr
Match: gi|902167244|gb|KNA07345.1| (hypothetical protein SOVF_172790 [Spinacia oleracea])

HSP 1 Score: 749.6 bits (1934), Expect = 4.600e-213
Identity = 389/392 (99.23%), Postives = 389/392 (99.23%), Query Frame = 1


		  
Query: 259 MNILSSDYFRDLYRLKTYHEVIDEIYNQVDHVEPWMTGNCRGPSTAFCLLYKFFTMKLTV 318
           MNILSSDYFRDLYRLKTYHEVIDEIYNQVDHVEPWMTGNCRGPSTAFCLLYKFFTMKLTV
Sbjct: 1   MNILSSDYFRDLYRLKTYHEVIDEIYNQVDHVEPWMTGNCRGPSTAFCLLYKFFTMKLTV 60

Query: 319 KQMHGLLKHPDSPYIRAVGFLYLRYAADPKTLWSWFEPYIQDDEEFSPGSSGRMTTMGVY 378
           KQMHGLLKHPDSPYIRAVGFLYLRYAADPKTLWSWFEPYIQDDEEFSPGSSGRMTTMGVY
Sbjct: 61  KQMHGLLKHPDSPYIRAVGFLYLRYAADPKTLWSWFEPYIQDDEEFSPGSSGRMTTMGVY 120

Query: 379 VRDLLLGQYYFDTLFPRVPVPVVRQIVSNLEKMNLPSKSSGSIGENSRLGSEDTARRPPS 438
           VRDLLLGQYYFDTLFPRVPVPVVRQIVSNLEKMNLPSKSSGSIGENSRLGSEDTARRPPS
Sbjct: 121 VRDLLLGQYYFDTLFPRVPVPVVRQIVSNLEKMNLPSKSSGSIGENSRLGSEDTARRPPS 180

Query: 439 VKAALSVSFGQRAPHRASTRDSSPVRRAVPTPPHDRGGRDDSRRSPSRHRSQSRDRDYSD 498
           VKAALSVSFGQRAPHRASTRD SPVRRAVPTPPHDRGGRDDSRRSPSRHRSQSRDRDYSD
Sbjct: 181 VKAALSVSFGQRAPHRASTRDFSPVRRAVPTPPHDRGGRDDSRRSPSRHRSQSRDRDYSD 240

Query: 499 RDVGKGRNHDQDRDRYRDRDRERSRDYERDRDRRRDYDGSRYCEREGIRRGNRDNYNDDR 558
           RDVGKGRNHDQDRDRYRDRDRERSRDYERDRDRRRDYDGSRYCEREGIRRGNRDNYNDDR
Sbjct: 241 RDVGKGRNHDQDRDRYRDRDRERSRDYERDRDRRRDYDGSRYCEREGIRRGNRDNYNDDR 300

Query: 559 SRRSRSRSRSRSRSRSRRSPSPGRSERLDHYSSTHNDKSKEKERATASTNLAKLKDLYGD 618
           SR  RSRSRSRSRSRSRRSPSPGRSERLDHYSSTHNDKSKEKERATASTNLAKLKDLYGD
Sbjct: 301 SR--RSRSRSRSRSRSRRSPSPGRSERLDHYSSTHNDKSKEKERATASTNLAKLKDLYGD 360

Query: 619 LGNQKGDASMERAYTKDSGAEEVIRLGGARWK 651
           LGNQKGDASMERAYTKDSGAEEVIRLGGARWK
Sbjct: 361 LGNQKGDASMERAYTKDSGAEEVIRLGGARWK 390

[Close]

BLAST of Spo03803.1 vs. NCBI nr
Match: gi|731342063|ref|XP_010682209.1| (PREDICTED: pre-mRNA-splicing factor 38B isoform X5 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 626.3 bits (1614), Expect = 5.900e-176
Identity = 344/429 (80.19%), Postives = 369/429 (86.01%), Query Frame = 1


		  
Query: 246 GKPIESLFEKVLCMNILSSDYFRDLYRLKTYHEVIDEIYNQVDHVEPWMTGNCRGPSTAF 305
           GKPI+SL EKVLCMNILSSDYFRDL RLKTYHEV+DEIYNQVDHVEPWMTGNCRGPSTAF
Sbjct: 8   GKPIDSLLEKVLCMNILSSDYFRDLLRLKTYHEVVDEIYNQVDHVEPWMTGNCRGPSTAF 67

Query: 306 CLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYAADPKTLWSWFEPYIQDDEEFS 365
           CLLYKFFTMKLT KQMHGLLKHPDSPYIRA+GFLYLRYA DPK LWSWFEPYI DDEEFS
Sbjct: 68  CLLYKFFTMKLTAKQMHGLLKHPDSPYIRAIGFLYLRYAGDPKQLWSWFEPYITDDEEFS 127

Query: 366 PGSSGRMTTMGVYVRDLLLGQYYFDTLFPRVPVPVVRQIVSNLEKMNLPSKSSGSIGENS 425
           PGS+GRMTTMGVYVRDLLLGQYYFDTLFPRVPVPVVRQIV +LE+M LP+KSSGSIGENS
Sbjct: 128 PGSNGRMTTMGVYVRDLLLGQYYFDTLFPRVPVPVVRQIVCHLEQMKLPTKSSGSIGENS 187

Query: 426 RLGSEDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRAVPTPPHDRGGRDDSRRSPS 485
           R+GSEDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRA+P PP+DRGG +DSRRSPS
Sbjct: 188 RVGSEDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRALPPPPYDRGGSEDSRRSPS 247

Query: 486 RHRSQSRD---RDYSDRDVGKGRNHDQ----DRDRYRDRD-----------RERSRDYER 545
           RHRSQSRD   R+Y DRD  K RN DQ    DRDRYRDRD           R+R RDY R
Sbjct: 248 RHRSQSRDLSEREYPDRDGDKMRNRDQDRDRDRDRYRDRDIRDRDRDRERSRDRERDYGR 307

Query: 546 DRDRRRDYDGSRYCEREGIRRGNRDN--YNDDRSRRSRSRSRSRSR--SRSRRSPSPGRS 605
           +RDRR DYD  RY ER G RR +RDN  Y++ RS+RSRSRSRSRSR  S+SRRSPSP RS
Sbjct: 308 ERDRRHDYDRGRYSERVGSRR-DRDNGRYSEHRSQRSRSRSRSRSRSTSKSRRSPSPVRS 367

Query: 606 ERLDHYSS--THNDKSKEKERATASTNLAKLKDLYGDLGNQKGDASMERAYTKDSGAEEV 651
           E  DHYSS  T  DKSKE +RA+AS+NLAKLKDLYGDLG +KGDAS ++ YTKDS  EEV
Sbjct: 368 EHFDHYSSSQTQRDKSKENDRASASSNLAKLKDLYGDLGVKKGDASEDKGYTKDSSTEEV 427

[Close]

BLAST of Spo03803.1 vs. NCBI nr
Match: gi|731342061|ref|XP_010682208.1| (PREDICTED: pre-mRNA-splicing factor 38B isoform X4 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 593.2 bits (1528), Expect = 5.500e-166
Identity = 339/469 (72.28%), Postives = 368/469 (78.46%), Query Frame = 1


		  
Query: 246 GKPIESLFEKVLCMNILSSDYFRDLYRLKTYHEVIDEIYNQVDHVEPWMTGNCRGPSTAF 305
           GKPI+SL EKVLCMNILSSDYFRDL RLKTYHEV+DEIYNQVDHVEPWMTGNCRGPSTAF
Sbjct: 8   GKPIDSLLEKVLCMNILSSDYFRDLLRLKTYHEVVDEIYNQVDHVEPWMTGNCRGPSTAF 67

Query: 306 CLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYAADPKTLWSWFE---------- 365
           CLLYKFFTMKLT KQMHGLLKHPDSPYIRA+GFLYLRYA DPK LWSWFE          
Sbjct: 68  CLLYKFFTMKLTAKQMHGLLKHPDSPYIRAIGFLYLRYAGDPKQLWSWFEPYITDDELPS 127

Query: 366 --------------------PYIQDD----------EEFSPGSSGRMTTMGVYVRDLLLG 425
                                +I ++          +EFSPGS+GRMTTMGVYVRDLLLG
Sbjct: 128 CPCATFDKLSENGFVFYISCSFINNEVVGCIHPKNHKEFSPGSNGRMTTMGVYVRDLLLG 187

Query: 426 QYYFDTLFPRVPVPVVRQIVSNLEKMNLPSKSSGSIGENSRLGSEDTARRPPSVKAALSV 485
           QYYFDTLFPRVPVPVVRQIV +LE+M LP+KSSGSIGENSR+GSEDTARRPPSVKAALSV
Sbjct: 188 QYYFDTLFPRVPVPVVRQIVCHLEQMKLPTKSSGSIGENSRVGSEDTARRPPSVKAALSV 247

Query: 486 SFGQRAPHRASTRDSSPVRRAVPTPPHDRGGRDDSRRSPSRHRSQSRD---RDYSDRDVG 545
           SFGQRAPHRASTRDSSPVRRA+P PP+DRGG +DSRRSPSRHRSQSRD   R+Y DRD  
Sbjct: 248 SFGQRAPHRASTRDSSPVRRALPPPPYDRGGSEDSRRSPSRHRSQSRDLSEREYPDRDGD 307

Query: 546 KGRNHDQ----DRDRYRDRD-----------RERSRDYERDRDRRRDYDGSRYCEREGIR 605
           K RN DQ    DRDRYRDRD           R+R RDY R+RDRR DYD  RY ER G R
Sbjct: 308 KMRNRDQDRDRDRDRYRDRDIRDRDRDRERSRDRERDYGRERDRRHDYDRGRYSERVGSR 367

Query: 606 RGNRDN--YNDDRSRRSRSRSRSRSR--SRSRRSPSPGRSERLDHYSS--THNDKSKEKE 651
           R +RDN  Y++ RS+RSRSRSRSRSR  S+SRRSPSP RSE  DHYSS  T  DKSKE +
Sbjct: 368 R-DRDNGRYSEHRSQRSRSRSRSRSRSTSKSRRSPSPVRSEHFDHYSSSQTQRDKSKEND 427

[Close]

BLAST of Spo03803.1 vs. NCBI nr
Match: gi|731342059|ref|XP_010682207.1| (PREDICTED: pre-mRNA-splicing factor 38B isoform X3 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 592.8 bits (1527), Expect = 7.200e-166
Identity = 342/472 (72.46%), Postives = 369/472 (78.18%), Query Frame = 1


		  
Query: 246 GKPIESLFEKVLCMNILSSDYFRDLYRLKTYHEVIDEIYNQVDHVEPWMTGNCRGPSTAF 305
           GKPI+SL EKVLCMNILSSDYFRDL RLKTYHEV+DEIYNQVDHVEPWMTGNCRGPSTAF
Sbjct: 8   GKPIDSLLEKVLCMNILSSDYFRDLLRLKTYHEVVDEIYNQVDHVEPWMTGNCRGPSTAF 67

Query: 306 CLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYAADPKTLWSWFE--------P- 365
           CLLYKFFTMKLT KQMHGLLKHPDSPYIRA+GFLYLRYA DPK LWSWFE        P 
Sbjct: 68  CLLYKFFTMKLTAKQMHGLLKHPDSPYIRAIGFLYLRYAGDPKQLWSWFEPYITDDELPS 127

Query: 366 ----------------YIQDD------------------EEFSPGSSGRMTTMGVYVRDL 425
                           YI+ D                  +EFSPGS+GRMTTMGVYVRDL
Sbjct: 128 CPCATFDKLSENGFVFYIRCDSCSFINNEVVGCIHPKNHKEFSPGSNGRMTTMGVYVRDL 187

Query: 426 LLGQYYFDTLFPRVPVPVVRQIVSNLEKMNLPSKSSGSIGENSRLGSEDTARRPPSVKAA 485
           LLGQYYFDTLFPRVPVPVVRQIV +LE+M LP+KSSGSIGENSR+GSEDTARRPPSVKAA
Sbjct: 188 LLGQYYFDTLFPRVPVPVVRQIVCHLEQMKLPTKSSGSIGENSRVGSEDTARRPPSVKAA 247

Query: 486 LSVSFGQRAPHRASTRDSSPVRRAVPTPPHDRGGRDDSRRSPSRHRSQSRD---RDYSDR 545
           LSVSFGQRAPHRASTRDSSPVRRA+P PP+DRGG +DSRRSPSRHRSQSRD   R+Y DR
Sbjct: 248 LSVSFGQRAPHRASTRDSSPVRRALPPPPYDRGGSEDSRRSPSRHRSQSRDLSEREYPDR 307

Query: 546 DVGKGRNHDQ----DRDRYRDRD-----------RERSRDYERDRDRRRDYDGSRYCERE 605
           D  K RN DQ    DRDRYRDRD           R+R RDY R+RDRR DYD  RY ER 
Sbjct: 308 DGDKMRNRDQDRDRDRDRYRDRDIRDRDRDRERSRDRERDYGRERDRRHDYDRGRYSERV 367

Query: 606 GIRRGNRDN--YNDDRSRRSRSRSRSRSR--SRSRRSPSPGRSERLDHYSS--THNDKSK 651
           G RR +RDN  Y++ RS+RSRSRSRSRSR  S+SRRSPSP RSE  DHYSS  T  DKSK
Sbjct: 368 GSRR-DRDNGRYSEHRSQRSRSRSRSRSRSTSKSRRSPSPVRSEHFDHYSSSQTQRDKSK 427

[Close]

BLAST of Spo03803.1 vs. NCBI nr
Match: gi|823147516|ref|XP_012473671.1| (PREDICTED: pre-mRNA-splicing factor 38B isoform X1 [Gossypium raimondii])

HSP 1 Score: 542.7 bits (1397), Expect = 8.600e-151
Identity = 299/416 (71.88%), Postives = 334/416 (80.29%), Query Frame = 1


		  
Query: 246 GKPIESLFEKVLCMNILSSDYFRDLYRLKTYHEVIDEIYNQVDHVEPWMTGNCRGPSTAF 305
           GKPI+SL EKVLCMNILSSDYF++LYRLKTYHEVIDEIYNQVDHVEPWMTGNCRGPSTAF
Sbjct: 7   GKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCRGPSTAF 66

Query: 306 CLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYAADPKTLWSWFEPYIQDDEEFS 365
           CLLYKFFTMKLTVKQMHGLLKHPDSPYIRA+GFLYLRYAADPKTLWSWFEPYI+D+EEFS
Sbjct: 67  CLLYKFFTMKLTVKQMHGLLKHPDSPYIRAIGFLYLRYAADPKTLWSWFEPYIKDEEEFS 126

Query: 366 PGSSGRMTTMGVYVRDLLLGQYYFDTLFPRVPVPVVRQIVSNLEKMNLPSKSSGSIGENS 425
           PGSSGRMTTMGVYVRDLLLGQYYFDTLFPR+PVPV+RQ+ SNLEKM LP+K SGS G+N+
Sbjct: 127 PGSSGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVTSNLEKMKLPTKPSGSTGDNN 186

Query: 426 RLGSEDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRAVPTPPHDRGGRDDSRRSPS 485
           R GS+DTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRR +P  P+DR   DD+RRSPS
Sbjct: 187 RHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPSPYDRSSGDDARRSPS 246

Query: 486 RHRSQSRDRDYSDRDVGKGRNHDQDRDRYRD------RDRERSRDYERDRDRRRDYDGSR 545
             RSQSRDR+YSD+D  + R+ D++R+R RD      RDR+R RD  RDRDR RD+D +R
Sbjct: 247 HRRSQSRDREYSDKDRDRNRDRDRERERSRDQDRGWGRDRDRERDRSRDRDRDRDWDRNR 306

Query: 546 YCEREGIRRGNRD----NYNDDRSRRSRSRSRSRSRSRSRRSPSPGRSERLDHYSSTHND 605
              RE  R    D    +   D SRR RSRSRS S S +RRS S        HY      
Sbjct: 307 ERNRERERERRHDYDRRSRYADESRRYRSRSRSPSVSGNRRSRSQSEQGGNSHYDRL--- 366

Query: 606 KSKEKERATASTNLAKLKDLYGDLGNQKG-DASMERAYTKDSGAEEVIRLGGARWK 651
            S  KE + AS+NLAKLKDLYGD+ + KG DA  ER   +D+  EEVIRLGG+ WK
Sbjct: 367 PSPAKEGSKASSNLAKLKDLYGDVSDTKGDDAGFERIAKRDNSGEEVIRLGGSSWK 419

[Close]

BLAST of Spo03803.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QJA2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_172790 PE=4 SV=1)

HSP 1 Score: 749.6 bits (1934), Expect = 3.200e-213
Identity = 389/392 (99.23%), Postives = 389/392 (99.23%), Query Frame = 1


		  
Query: 259 MNILSSDYFRDLYRLKTYHEVIDEIYNQVDHVEPWMTGNCRGPSTAFCLLYKFFTMKLTV 318
           MNILSSDYFRDLYRLKTYHEVIDEIYNQVDHVEPWMTGNCRGPSTAFCLLYKFFTMKLTV
Sbjct: 1   MNILSSDYFRDLYRLKTYHEVIDEIYNQVDHVEPWMTGNCRGPSTAFCLLYKFFTMKLTV 60

Query: 319 KQMHGLLKHPDSPYIRAVGFLYLRYAADPKTLWSWFEPYIQDDEEFSPGSSGRMTTMGVY 378
           KQMHGLLKHPDSPYIRAVGFLYLRYAADPKTLWSWFEPYIQDDEEFSPGSSGRMTTMGVY
Sbjct: 61  KQMHGLLKHPDSPYIRAVGFLYLRYAADPKTLWSWFEPYIQDDEEFSPGSSGRMTTMGVY 120

Query: 379 VRDLLLGQYYFDTLFPRVPVPVVRQIVSNLEKMNLPSKSSGSIGENSRLGSEDTARRPPS 438
           VRDLLLGQYYFDTLFPRVPVPVVRQIVSNLEKMNLPSKSSGSIGENSRLGSEDTARRPPS
Sbjct: 121 VRDLLLGQYYFDTLFPRVPVPVVRQIVSNLEKMNLPSKSSGSIGENSRLGSEDTARRPPS 180

Query: 439 VKAALSVSFGQRAPHRASTRDSSPVRRAVPTPPHDRGGRDDSRRSPSRHRSQSRDRDYSD 498
           VKAALSVSFGQRAPHRASTRD SPVRRAVPTPPHDRGGRDDSRRSPSRHRSQSRDRDYSD
Sbjct: 181 VKAALSVSFGQRAPHRASTRDFSPVRRAVPTPPHDRGGRDDSRRSPSRHRSQSRDRDYSD 240

Query: 499 RDVGKGRNHDQDRDRYRDRDRERSRDYERDRDRRRDYDGSRYCEREGIRRGNRDNYNDDR 558
           RDVGKGRNHDQDRDRYRDRDRERSRDYERDRDRRRDYDGSRYCEREGIRRGNRDNYNDDR
Sbjct: 241 RDVGKGRNHDQDRDRYRDRDRERSRDYERDRDRRRDYDGSRYCEREGIRRGNRDNYNDDR 300

Query: 559 SRRSRSRSRSRSRSRSRRSPSPGRSERLDHYSSTHNDKSKEKERATASTNLAKLKDLYGD 618
           SR  RSRSRSRSRSRSRRSPSPGRSERLDHYSSTHNDKSKEKERATASTNLAKLKDLYGD
Sbjct: 301 SR--RSRSRSRSRSRSRRSPSPGRSERLDHYSSTHNDKSKEKERATASTNLAKLKDLYGD 360

Query: 619 LGNQKGDASMERAYTKDSGAEEVIRLGGARWK 651
           LGNQKGDASMERAYTKDSGAEEVIRLGGARWK
Sbjct: 361 LGNQKGDASMERAYTKDSGAEEVIRLGGARWK 390

[Close]

BLAST of Spo03803.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C706_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g146300 PE=4 SV=1)

HSP 1 Score: 626.3 bits (1614), Expect = 4.100e-176
Identity = 344/429 (80.19%), Postives = 369/429 (86.01%), Query Frame = 1


		  
Query: 246 GKPIESLFEKVLCMNILSSDYFRDLYRLKTYHEVIDEIYNQVDHVEPWMTGNCRGPSTAF 305
           GKPI+SL EKVLCMNILSSDYFRDL RLKTYHEV+DEIYNQVDHVEPWMTGNCRGPSTAF
Sbjct: 8   GKPIDSLLEKVLCMNILSSDYFRDLLRLKTYHEVVDEIYNQVDHVEPWMTGNCRGPSTAF 67

Query: 306 CLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYAADPKTLWSWFEPYIQDDEEFS 365
           CLLYKFFTMKLT KQMHGLLKHPDSPYIRA+GFLYLRYA DPK LWSWFEPYI DDEEFS
Sbjct: 68  CLLYKFFTMKLTAKQMHGLLKHPDSPYIRAIGFLYLRYAGDPKQLWSWFEPYITDDEEFS 127

Query: 366 PGSSGRMTTMGVYVRDLLLGQYYFDTLFPRVPVPVVRQIVSNLEKMNLPSKSSGSIGENS 425
           PGS+GRMTTMGVYVRDLLLGQYYFDTLFPRVPVPVVRQIV +LE+M LP+KSSGSIGENS
Sbjct: 128 PGSNGRMTTMGVYVRDLLLGQYYFDTLFPRVPVPVVRQIVCHLEQMKLPTKSSGSIGENS 187

Query: 426 RLGSEDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRAVPTPPHDRGGRDDSRRSPS 485
           R+GSEDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRA+P PP+DRGG +DSRRSPS
Sbjct: 188 RVGSEDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRALPPPPYDRGGSEDSRRSPS 247

Query: 486 RHRSQSRD---RDYSDRDVGKGRNHDQ----DRDRYRDRD-----------RERSRDYER 545
           RHRSQSRD   R+Y DRD  K RN DQ    DRDRYRDRD           R+R RDY R
Sbjct: 248 RHRSQSRDLSEREYPDRDGDKMRNRDQDRDRDRDRYRDRDIRDRDRDRERSRDRERDYGR 307

Query: 546 DRDRRRDYDGSRYCEREGIRRGNRDN--YNDDRSRRSRSRSRSRSR--SRSRRSPSPGRS 605
           +RDRR DYD  RY ER G RR +RDN  Y++ RS+RSRSRSRSRSR  S+SRRSPSP RS
Sbjct: 308 ERDRRHDYDRGRYSERVGSRR-DRDNGRYSEHRSQRSRSRSRSRSRSTSKSRRSPSPVRS 367

Query: 606 ERLDHYSS--THNDKSKEKERATASTNLAKLKDLYGDLGNQKGDASMERAYTKDSGAEEV 651
           E  DHYSS  T  DKSKE +RA+AS+NLAKLKDLYGDLG +KGDAS ++ YTKDS  EEV
Sbjct: 368 EHFDHYSSSQTQRDKSKENDRASASSNLAKLKDLYGDLGVKKGDASEDKGYTKDSSTEEV 427

[Close]

BLAST of Spo03803.1 vs. UniProtKB/TrEMBL
Match: G5DX06_SILLA (Pre-mRNA-splicing factor (Fragment) OS=Silene latifolia PE=2 SV=1)

HSP 1 Score: 604.4 bits (1557), Expect = 1.700e-169
Identity = 327/424 (77.12%), Postives = 361/424 (85.14%), Query Frame = 1


		  
Query: 246 GKPIESLFEKVLCMNILSSDYFRDLYRLKTYHEVIDEIYNQVDHVEPWMTGNCRGPSTAF 305
           GKPI+SL EKVLCMNILSSDYFRDL+RLKTYHEV+DEIYNQVDHVEPWMTGNCRGPSTAF
Sbjct: 8   GKPIDSLVEKVLCMNILSSDYFRDLFRLKTYHEVVDEIYNQVDHVEPWMTGNCRGPSTAF 67

Query: 306 CLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYAADPKTLWSWFEPYIQDDEEFS 365
           CLLYKFFTMKLTVKQMHGLLKHPDSPYIRA+GFLYLRYA D KTLW+WFEPY+ DDEEFS
Sbjct: 68  CLLYKFFTMKLTVKQMHGLLKHPDSPYIRAIGFLYLRYAGDAKTLWNWFEPYVNDDEEFS 127

Query: 366 PGSSGRMTTMGVYVRDLLLGQYYFDTLFPRVPVPVVRQIVSNLEKMNLPSKSSGSIGENS 425
           PGS+G+MTTMGVYVRDLLLGQYYFDTLFPRVPV V+RQI SNLEKMNLP+K SGSIG+NS
Sbjct: 128 PGSNGKMTTMGVYVRDLLLGQYYFDTLFPRVPVTVLRQITSNLEKMNLPTKPSGSIGDNS 187

Query: 426 RLGSEDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRAVPTPPHDRGGRDDSRRSPS 485
           R GSEDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRA+P P +D GGRDDSRRSPS
Sbjct: 188 RFGSEDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRALPPPSYDDGGRDDSRRSPS 247

Query: 486 RHRSQSR---DRDYSDRDVGKGRNHDQDRDRYRDRD---------------RERSRDYER 545
           RHRSQSR   DRDY DR+  K R+ D+DRDR RDRD               R+R RD++R
Sbjct: 248 RHRSQSRDLSDRDYMDRNGDKARDRDRDRDRGRDRDGYSDRDIRDRDGDRARDRYRDHDR 307

Query: 546 DRDRRRDYDGSRYCEREGIRRG-NRDNYNDDRSRRSRSRSRSRSRSRSRRSPSPGRSERL 605
           DRDRRRDYD  RY EREG RR  + D ++D RSRRSRSRSRSRSRSRSR++P    SER 
Sbjct: 308 DRDRRRDYDRPRYSEREGSRRDRDSDRHSDYRSRRSRSRSRSRSRSRSRQTP----SERF 367

Query: 606 DHYSSTHNDKSKEKERATASTNLAKLKDLYGDLGNQKGDASMERAYTKDSGAEEVIRLGG 651
           D +SS+  D  KEK++A+ S+NLAKLKDLYGDL  QKGDAS  R + KDSG+EEVIRLGG
Sbjct: 368 DDHSSSQRDAGKEKQKASVSSNLAKLKDLYGDLSEQKGDASTGRGF-KDSGSEEVIRLGG 426

[Close]

BLAST of Spo03803.1 vs. UniProtKB/TrEMBL
Match: G5DX07_SILLA (Pre-mRNA-splicing factor (Fragment) OS=Silene latifolia PE=2 SV=1)

HSP 1 Score: 603.6 bits (1555), Expect = 2.800e-169
Identity = 327/424 (77.12%), Postives = 361/424 (85.14%), Query Frame = 1


		  
Query: 246 GKPIESLFEKVLCMNILSSDYFRDLYRLKTYHEVIDEIYNQVDHVEPWMTGNCRGPSTAF 305
           GKPI+SL EKVLCMNILSSDYFRDL+RLKTYHEV+DEIYNQVDHVEPWMTGNCRGPSTAF
Sbjct: 8   GKPIDSLVEKVLCMNILSSDYFRDLFRLKTYHEVVDEIYNQVDHVEPWMTGNCRGPSTAF 67

Query: 306 CLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYAADPKTLWSWFEPYIQDDEEFS 365
           CLLYKFFTMKLTVKQMHGLLKHPDSPYIRA+GFLYLRYA D KTLW+WFEPY+ DDEEFS
Sbjct: 68  CLLYKFFTMKLTVKQMHGLLKHPDSPYIRAIGFLYLRYAGDAKTLWNWFEPYVNDDEEFS 127

Query: 366 PGSSGRMTTMGVYVRDLLLGQYYFDTLFPRVPVPVVRQIVSNLEKMNLPSKSSGSIGENS 425
           PGS+G+MTTMGVYVRDLLLGQYYFDTLFPRVPVPV+RQI SNLEKMNLP+K SGSIG+NS
Sbjct: 128 PGSNGKMTTMGVYVRDLLLGQYYFDTLFPRVPVPVLRQITSNLEKMNLPTKPSGSIGDNS 187

Query: 426 RLGSEDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRAVPTPPHDRGGRDDSRRSPS 485
           R GSEDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRA+P   +D GGRDDSRRSPS
Sbjct: 188 RFGSEDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRALPPSSYDDGGRDDSRRSPS 247

Query: 486 RHRSQSR---DRDYSDRDVGKGRNHDQDRDRYRDRD---------------RERSRDYER 545
           RHRSQSR   DRDY DR+  K R+ D+DRDR RDRD               R+R RD++R
Sbjct: 248 RHRSQSRDLSDRDYMDRNGDKARDRDRDRDRGRDRDGYSDRDIRDRDGDRARDRYRDHDR 307

Query: 546 DRDRRRDYDGSRYCEREGIRRG-NRDNYNDDRSRRSRSRSRSRSRSRSRRSPSPGRSERL 605
           DRDRRRDYD  RY EREG RR  + D ++D RSRRSRSRSRSRSRSRSR++P    SER 
Sbjct: 308 DRDRRRDYDRPRYSEREGSRRDRDSDRHSDYRSRRSRSRSRSRSRSRSRQTP----SERF 367

Query: 606 DHYSSTHNDKSKEKERATASTNLAKLKDLYGDLGNQKGDASMERAYTKDSGAEEVIRLGG 651
           D +SS+  D  KEK++A+ S+NLAKLKDLYGDL  QKGDAS  R + KDSG+EEVIRLGG
Sbjct: 368 DVHSSSQRDAGKEKQKASVSSNLAKLKDLYGDLSEQKGDASTGRGF-KDSGSEEVIRLGG 426

[Close]

BLAST of Spo03803.1 vs. UniProtKB/TrEMBL
Match: A0A0D2R045_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G064700 PE=4 SV=1)

HSP 1 Score: 542.7 bits (1397), Expect = 6.000e-151
Identity = 299/416 (71.88%), Postives = 334/416 (80.29%), Query Frame = 1


		  
Query: 246 GKPIESLFEKVLCMNILSSDYFRDLYRLKTYHEVIDEIYNQVDHVEPWMTGNCRGPSTAF 305
           GKPI+SL EKVLCMNILSSDYF++LYRLKTYHEVIDEIYNQVDHVEPWMTGNCRGPSTAF
Sbjct: 7   GKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCRGPSTAF 66

Query: 306 CLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYAADPKTLWSWFEPYIQDDEEFS 365
           CLLYKFFTMKLTVKQMHGLLKHPDSPYIRA+GFLYLRYAADPKTLWSWFEPYI+D+EEFS
Sbjct: 67  CLLYKFFTMKLTVKQMHGLLKHPDSPYIRAIGFLYLRYAADPKTLWSWFEPYIKDEEEFS 126

Query: 366 PGSSGRMTTMGVYVRDLLLGQYYFDTLFPRVPVPVVRQIVSNLEKMNLPSKSSGSIGENS 425
           PGSSGRMTTMGVYVRDLLLGQYYFDTLFPR+PVPV+RQ+ SNLEKM LP+K SGS G+N+
Sbjct: 127 PGSSGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVLRQVTSNLEKMKLPTKPSGSTGDNN 186

Query: 426 RLGSEDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRAVPTPPHDRGGRDDSRRSPS 485
           R GS+DTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRR +P  P+DR   DD+RRSPS
Sbjct: 187 RHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPSPYDRSSGDDARRSPS 246

Query: 486 RHRSQSRDRDYSDRDVGKGRNHDQDRDRYRD------RDRERSRDYERDRDRRRDYDGSR 545
             RSQSRDR+YSD+D  + R+ D++R+R RD      RDR+R RD  RDRDR RD+D +R
Sbjct: 247 HRRSQSRDREYSDKDRDRNRDRDRERERSRDQDRGWGRDRDRERDRSRDRDRDRDWDRNR 306

Query: 546 YCEREGIRRGNRD----NYNDDRSRRSRSRSRSRSRSRSRRSPSPGRSERLDHYSSTHND 605
              RE  R    D    +   D SRR RSRSRS S S +RRS S        HY      
Sbjct: 307 ERNRERERERRHDYDRRSRYADESRRYRSRSRSPSVSGNRRSRSQSEQGGNSHYDRL--- 366

Query: 606 KSKEKERATASTNLAKLKDLYGDLGNQKG-DASMERAYTKDSGAEEVIRLGGARWK 651
            S  KE + AS+NLAKLKDLYGD+ + KG DA  ER   +D+  EEVIRLGG+ WK
Sbjct: 367 PSPAKEGSKASSNLAKLKDLYGDVSDTKGDDAGFERIAKRDNSGEEVIRLGGSSWK 419

[Close]

BLAST of Spo03803.1 vs. ExPASy Swiss-Prot
Match: PR38B_RAT (Pre-mRNA-splicing factor 38B OS=Rattus norvegicus GN=Prpf38b PE=1 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 4.800e-45
Identity = 157/424 (37.03%), Postives = 208/424 (49.06%), Query Frame = 1


		  
Query: 243 PILGKPIESLFEKVLCMNILSSDYFR-DLYRLKTYHEVIDEIYNQVDHVEPW-------- 302
           P+ G         ++  NILSS YF+  LY LKTYHEV+DEIY +V HVEPW        
Sbjct: 48  PLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTA 107

Query: 303 -MTGNCRGP---------STAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRY 362
             TG C G          STAFCLLYK FT+KLT KQ+ GL+ H DSPYIRA+GF+Y+RY
Sbjct: 108 GQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRY 167

Query: 363 AADPKTLWSWFEPYIQDDEEFS-PGSSGRMTTMGVYVRDLLLGQYYFDTLFPRVPVPVVR 422
              P  LW WFE ++ D+E+       G + T+G  +R  L    +F TLFPR+PVPV +
Sbjct: 168 TQPPTDLWDWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQK 227

Query: 423 QIVSNLEKMNLPSKSSGSIGENSRLGSEDTARRPPSVKAALSVSFGQRAPHRASTRDSSP 482
            I   ++      K  G  G    +      RR  S + +LS    +R+P R+ +R    
Sbjct: 228 NIDQQIKTRPRKIKKDGKEGV-EEIDRHIERRRSRSPRRSLS---PRRSPRRSRSRS--- 287

Query: 483 VRRAVPTPPHDRGGRDDSR--RSPSRHRSQSR-DRDYSDRDVGKGRNHDQDR--DRYRDR 542
                    H R G   S   R   R + + R +R+  +R+  + R+   DR  DR R R
Sbjct: 288 ---------HHRDGHGSSSFDRELEREKERQRLEREAKEREKERRRSRSLDRGLDRRRSR 347

Query: 543 DRERSRDYERDRDR---RRDYDGSRYCEREGIRRGNRDNYNDDRSRRSRSRSRSRSRSRS 602
            RER R   R RDR   RRD D  R  E E  RR +RD   D  + R R R RSR RS+ 
Sbjct: 348 SRERHRSRSRSRDRKGDRRDRDREREKENERGRRRDRDYDKDRGNDRERDRERSRERSKE 407

Query: 603 RRSPSPG--RSERLDHYSSTHNDKSKEKERATASTNLAKLKDLYGDLGNQKGDASMERAY 637
           +RS   G  +  + D     H D  KE ++  + +   + K          G  S  R+ 
Sbjct: 408 QRSRGEGEEKKHKEDKEDRRHRDDKKESKKKHSRSRSRERKHRSRSRSRNAGKRSRSRSK 455

[Close]

BLAST of Spo03803.1 vs. ExPASy Swiss-Prot
Match: PR38B_MOUSE (Pre-mRNA-splicing factor 38B OS=Mus musculus GN=Prpf38b PE=1 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 5.300e-44
Identity = 157/424 (37.03%), Postives = 209/424 (49.29%), Query Frame = 1


		  
Query: 243 PILGKPIESLFEKVLCMNILSSDYFR-DLYRLKTYHEVIDEIYNQVDHVEPW-------- 302
           P+ G         ++  NILSS YF+  LY LKTYHEV+DEIY +V HVEPW        
Sbjct: 49  PLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTA 108

Query: 303 -MTGNCRGP---------STAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRY 362
             TG C G          STAFCLLYK FT+KLT KQ+ GL+ H DSPYIRA+GF+Y+RY
Sbjct: 109 GQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRY 168

Query: 363 AADPKTLWSWFEPYIQDDEEFS-PGSSGRMTTMGVYVRDLLLGQYYFDTLFPRVPVPVVR 422
              P  LW WFE ++ D+E+       G + T+G  +R  L    +F TLFPR+PVPV +
Sbjct: 169 TQPPTDLWDWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQK 228

Query: 423 QIVSNLEKMNLPSKSSGSIGENSRLGSEDTARRPPSVKAALSVSFGQRAPHRASTRDSSP 482
            I   ++      K  G  G    +      RR  S + +LS    +R+P R+ +R    
Sbjct: 229 NIDQQIKTRPRKIKKDGKEG-IEEIDRHVERRRSRSPRRSLS---PRRSPRRSRSRS--- 288

Query: 483 VRRAVPTPPHDRGGRDDSR--RSPSRHRSQSR-DRDYSDRDVGKGRNHDQDR--DRYRDR 542
                    H R G   S   R   R + + R +R+  +R+  + R+   DR  DR R R
Sbjct: 289 ---------HHREGHGSSSFDRELEREKERQRLEREAKEREKERRRSRSIDRGLDRRRSR 348

Query: 543 DRERSRDYERDRDR---RRDYDGSRYCEREGIRRGNRDNYNDDRSRRSRSRSRSRSRSRS 602
            RER R   R RDR   RRD D  R  E E  RR +RD   +  S R R R RSR RS+ 
Sbjct: 349 SRERHRSRSRSRDRKGDRRDRDREREKENERGRRRDRDYDKERGSDRERDRERSRERSKE 408

Query: 603 RRSPSPG--RSERLDHYSSTHNDKSKEKERATASTNLAKLKDLYGDLGNQKGDASMERAY 637
           +RS   G  +  + D     H D  KE ++  + +   + K  +       G  S  R+ 
Sbjct: 409 QRSRGDGEEKKHKEDKEDRRHRDDKKESKKKHSRSRSRERK--HRSRSRNAGKRSRSRSK 454

[Close]

BLAST of Spo03803.1 vs. ExPASy Swiss-Prot
Match: PR38B_DANRE (Pre-mRNA-splicing factor 38B OS=Danio rerio GN=prpf38b PE=2 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 4.500e-43
Identity = 149/414 (35.99%), Postives = 204/414 (49.28%), Query Frame = 1


		  
Query: 217 QKQHLEVLAVSLVGGASANHLSFPAPPILGKPIESLFEKVLCMNILSSDYFR-DLYRLKT 276
           Q+Q  +       GG   N+L     P+ G         ++  N+LSS YF+  LY LKT
Sbjct: 5   QQQQQQQAVSKPTGGKHGNNL-----PLWGNEKTMNLNPMILTNVLSSPYFKVQLYELKT 64

Query: 277 YHEVIDEIYNQVDHVEPW---------MTGNCRGP---------STAFCLLYKFFTMKLT 336
           YHEV+DEIY +V+HVEPW          TG C G          STAFCLLYK FT+KLT
Sbjct: 65  YHEVVDEIYFKVNHVEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLT 124

Query: 337 VKQMHGLLKHPDSPYIRAVGFLYLRYAADPKTLWSWFEPYIQDDEEFS-PGSSGRMTTMG 396
            KQ+ GL+ H DSP IRA+GF+Y+RY   P  L  W++ ++ D+EE       G + T+G
Sbjct: 125 RKQVMGLITHSDSPDIRALGFMYIRYTQPPPDLVDWYDEFLDDEEELDVKAGGGCVMTVG 184

Query: 397 VYVRDLLLGQYYFDTLFPRVPVPVVRQIVSNLEKMNLPSKSSGSIGENSRLGSEDTARRP 456
             +R  L    +F TLFPR+PVPV + I       ++ S+      ++ +   E+ A   
Sbjct: 185 EMLRSFLTKLEWFSTLFPRIPVPVQKAI-----DQHMKSRPRKPPQKDEQEEEEEEATAA 244

Query: 457 PSVKAALSVSFGQRAPHRASTRDSSPVRRAVPTPPHDRGGRDDSRRSPSRHRSQSRDR-- 516
           P   AA +   G +   R   R  SP                  R+S +R RS+S  R  
Sbjct: 245 P---AADTGRHGDKRRSRTPRRSPSP------------------RKSQNRSRSRSHHRER 304

Query: 517 -----DYS-DRDVGKGRNHDQDRDRYRDRDRERSRDYERDRDRRRDYDGSRYCEREGIRR 576
                DY  +R+  + R   + +DR RDRDR+R RD ERDRDRRR     R  ER     
Sbjct: 305 HGASFDYELERERDRQRKEREGKDRDRDRDRDRERDRERDRDRRRSRTPDRNAER----- 364

Query: 577 GNRDNYNDDRSRRSRSRSRSRSRSRSRRSPSPGRSERLDHYSSTHNDKSKEKER 603
                      RRSRSR R RSRS SR   +  +    D  + +  ++S++K+R
Sbjct: 365 -----------RRSRSRERRRSRSTSRDKRTERKDRDKDREAESERERSRKKDR 371

[Close]

BLAST of Spo03803.1 vs. ExPASy Swiss-Prot
Match: PR38B_HUMAN (Pre-mRNA-splicing factor 38B OS=Homo sapiens GN=PRPF38B PE=1 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 5.500e-41
Identity = 158/426 (37.09%), Postives = 214/426 (50.23%), Query Frame = 1


		  
Query: 243 PILGKPIESLFEKVLCMNILSSDYFR-DLYRLKTYHEVIDEIYNQVDHVEPW-------- 302
           P+ G         ++  NILSS YF+  LY LKTYHEV+DEIY +V HVEPW        
Sbjct: 48  PLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTA 107

Query: 303 -MTGNCRGP---------STAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRY 362
             TG C G          STAFCLLYK FT+KLT KQ+ GL+ H DSPYIRA+GF+Y+RY
Sbjct: 108 GQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRY 167

Query: 363 AADPKTLWSWFEPYIQDDEEFS-PGSSGRMTTMGVYVRDLLLGQYYFDTLFPRVPVPVVR 422
              P  LW WFE ++ D+E+       G + T+G  +R  L    +F TLFPR+PVPV +
Sbjct: 168 TQPPTDLWDWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQK 227

Query: 423 QIVSNL---------------EKMNLPSKSSGSIGENSRLGSEDTARRPPSV----KAAL 482
            I   +               E+++   +   S      L    + RR  S     +   
Sbjct: 228 NIDQQIKTRPRKIKKDGKEGAEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHG 287

Query: 483 SVSFG---------QRAPHRASTRDSSPVR-RAVPTPPHDRGGRDDSRRSPSRHRSQSRD 542
           S SF          QR    A  R+    R R++     DRG      RS  RHRS+SR 
Sbjct: 288 SSSFDRELEREKERQRLEREAKEREKERRRSRSI-----DRGLERRRSRSRERHRSRSRS 347

Query: 543 RDYS----DRDV--------GKGRNHDQDRDR--YRDRDRERSRDYERDRDRRRDYDGSR 601
           RD      DRD         G+ R+ D D++R   R+++RERSR+  +++  R + +  +
Sbjct: 348 RDRKGDRRDRDREREKENERGRRRDRDYDKERGNEREKERERSRERSKEQRSRGEVEEKK 407

[Close]

BLAST of Spo03803.1 vs. ExPASy Swiss-Prot
Match: PRP38_ARATH (Pre-mRNA-splicing factor 38 OS=Arabidopsis thaliana GN=PRP38 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 2.100e-8
Identity = 107/397 (26.95%), Postives = 162/397 (40.81%), Query Frame = 1


		  
Query: 234 ANHLSFPAPPILGKPIESLFEKVLCMNILSSDYFRDLYRLKTYHEVIDEIYNQVDHVEPW 293
           AN     A  I G   ++L EK++   I    ++++     T   ++D+   ++DH+   
Sbjct: 2   ANRTDPLAKNIRGTNPQNLVEKIVRTKIYQHTFWKEQCFGLTAETLVDKAM-ELDHLGGT 61

Query: 294 MTGNCRGPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYAADPKTLWSW 353
             G+ R P+   CL+ K   ++   + +   +K+ D  Y+R +G  YLR       ++ +
Sbjct: 62  FGGS-RKPTPFLCLILKMLQIQPEKEIVVEFIKNDDYKYVRILGAFYLRLTGTDVDVYRY 121

Query: 354 FEPYIQD----DEEFSPGSSGRMTTMGVYVRDLLLGQYYFDTLFPRVPVPVVRQIVSNLE 413
            EP   D     ++ S G    +T +   + +LL   Y  D   PR+             
Sbjct: 122 LEPLYNDYRKVRQKLSDGKFS-LTHVDEVIEELLTKDYSCDIAMPRL------------- 181

Query: 414 KMNLPSKSSGSIGENSRLGSEDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRAVPT 473
           K     + +G + E  +   ED        +    ++ G        + D    RR   +
Sbjct: 182 KKRWTLEQNGLL-EPRKSVLEDDFEEEEEKEENEGIADG--------SEDEMDQRRK--S 241

Query: 474 PPHDRGGRDDSRRSPSRHRSQSRDRDYSDRDVGKGRNHDQDRDRY----RDRDRERSRDY 533
           P  +R    D RR   RHR    DRDY DRD    R+HD+D +R     RDRDRER RD+
Sbjct: 242 PERERERDRDRRRDSHRHR----DRDY-DRDYDMDRDHDRDYERERGHGRDRDRERDRDH 301

Query: 534 --ERDRDRRRDYDGSRYCEREGIRRGNRDNYNDDRSRRSRSRSRSRSRSRSRRSPSPGRS 593
             ERDRDR R  D  R                 DR  R+R RSRSRSR R R      R 
Sbjct: 302 YRERDRDRERGRDRER-----------------DRRDRARRRSRSRSRDRKRHETDDVRD 349

Query: 594 ERLDHYSSTHNDKSKEKERATASTNLAKLKDLYGDLG 621
                      +K KE      +  +A++  L   LG
Sbjct: 362 REEPKKKKEKKEKMKEDGTDHPNPEIAEMNRLRASLG 349

[Close]

BLAST of Spo03803.1 vs. TAIR (Arabidopsis)
Match: AT5G37370.1 (PRP38 family protein)

HSP 1 Score: 481.1 bits (1237), Expect = 1.100e-135
Identity = 278/409 (67.97%), Postives = 314/409 (76.77%), Query Frame = 1


		  
Query: 246 GKPIESLFEKVLCMNILSSDYFRDLYRLKTYHEVIDEIYNQVDHVEPWMTGNCRGPSTAF 305
           G+  ESL EKVL MNILSSDYF++LY LKTYHEVIDEIYNQV+HVEPWM GNCRGPSTA+
Sbjct: 8   GRAYESLLEKVLSMNILSSDYFKELYGLKTYHEVIDEIYNQVNHVEPWMGGNCRGPSTAY 67

Query: 306 CLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYAADPKTLWSWFEPYIQDDEEFS 365
           CLLYKFFTMKLTVKQMHGLLKH DSPYIRAVGFLYLRY AD KTLW+W+EPYI+DDEEFS
Sbjct: 68  CLLYKFFTMKLTVKQMHGLLKHTDSPYIRAVGFLYLRYVADAKTLWTWYEPYIKDDEEFS 127

Query: 366 PGSSGRMTTMGVYVRDLLLGQYYFDTLFPRVPVPVVRQIVSNLEKMNLPSKSSGSIGENS 425
           PGS+GRMTTMGVYVRDLLLG YYFDTLFPR+PVPV+RQIVSNLEKMNLP+K SGS G+ +
Sbjct: 128 PGSNGRMTTMGVYVRDLLLGLYYFDTLFPRIPVPVMRQIVSNLEKMNLPTKPSGSTGDMT 187

Query: 426 RLGSEDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRAVPTPPHDRGGRDDSRRSPS 485
           R GSEDTARRPPSVKA+LSVSFGQRAPHRASTR SSPVRR  PT     GG +  +RSP 
Sbjct: 188 R-GSEDTARRPPSVKASLSVSFGQRAPHRASTRGSSPVRRPPPTGYDRNGGDEVQQRSP- 247

Query: 486 RHRSQSRDRDYSDRDVGKGRNHDQDRDRYRDRDRERSRDYERDRDRRRDYDGSRYCEREG 545
             RSQSRD  YSDRD       D+ R+R R++DRER R  +R R+R RDY   R   R+ 
Sbjct: 248 -RRSQSRDY-YSDRD------SDRQREREREKDRERERGRDRYRERERDYGNDRRSRRDY 307

Query: 546 IRRGNRDNYNDDRSRRS-RSRSRSRSRSRS---RRSPSPGRSERLDHYSSTHNDKSKEKE 605
             R  R++Y DDRSR   RSRSRSRSRSRS    R P+P R           +  +KEK 
Sbjct: 308 DSRSRRNDYEDDRSRHDRRSRSRSRSRSRSVQIEREPTPKR-----------DSSNKEKS 367

Query: 606 RATASTNLAKLKDLYGDLGNQKGDASMERAYTKDSGAEEVIRLGGARWK 651
             T ++NLAKLKDLYGD  +QK D        KDS +EEVI+LGG+ W+
Sbjct: 368 AVTVNSNLAKLKDLYGDASSQKRDEGF--GTRKDSSSEEVIKLGGSSWR 393

[Close]

BLAST of Spo03803.1 vs. TAIR (Arabidopsis)
Match: AT2G40650.1 (PRP38 family protein)

HSP 1 Score: 62.4 bits (150), Expect = 1.200e-9
Identity = 107/397 (26.95%), Postives = 162/397 (40.81%), Query Frame = 1


		  
Query: 234 ANHLSFPAPPILGKPIESLFEKVLCMNILSSDYFRDLYRLKTYHEVIDEIYNQVDHVEPW 293
           AN     A  I G   ++L EK++   I    ++++     T   ++D+   ++DH+   
Sbjct: 2   ANRTDPLAKNIRGTNPQNLVEKIVRTKIYQHTFWKEQCFGLTAETLVDKAM-ELDHLGGT 61

Query: 294 MTGNCRGPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYAADPKTLWSW 353
             G+ R P+   CL+ K   ++   + +   +K+ D  Y+R +G  YLR       ++ +
Sbjct: 62  FGGS-RKPTPFLCLILKMLQIQPEKEIVVEFIKNDDYKYVRILGAFYLRLTGTDVDVYRY 121

Query: 354 FEPYIQD----DEEFSPGSSGRMTTMGVYVRDLLLGQYYFDTLFPRVPVPVVRQIVSNLE 413
            EP   D     ++ S G    +T +   + +LL   Y  D   PR+             
Sbjct: 122 LEPLYNDYRKVRQKLSDGKFS-LTHVDEVIEELLTKDYSCDIAMPRL------------- 181

Query: 414 KMNLPSKSSGSIGENSRLGSEDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRAVPT 473
           K     + +G + E  +   ED        +    ++ G        + D    RR   +
Sbjct: 182 KKRWTLEQNGLL-EPRKSVLEDDFEEEEEKEENEGIADG--------SEDEMDQRRK--S 241

Query: 474 PPHDRGGRDDSRRSPSRHRSQSRDRDYSDRDVGKGRNHDQDRDRY----RDRDRERSRDY 533
           P  +R    D RR   RHR    DRDY DRD    R+HD+D +R     RDRDRER RD+
Sbjct: 242 PERERERDRDRRRDSHRHR----DRDY-DRDYDMDRDHDRDYERERGHGRDRDRERDRDH 301

Query: 534 --ERDRDRRRDYDGSRYCEREGIRRGNRDNYNDDRSRRSRSRSRSRSRSRSRRSPSPGRS 593
             ERDRDR R  D  R                 DR  R+R RSRSRSR R R      R 
Sbjct: 302 YRERDRDRERGRDRER-----------------DRRDRARRRSRSRSRDRKRHETDDVRD 349

Query: 594 ERLDHYSSTHNDKSKEKERATASTNLAKLKDLYGDLG 621
                      +K KE      +  +A++  L   LG
Sbjct: 362 REEPKKKKEKKEKMKEDGTDHPNPEIAEMNRLRASLG 349

The following BLAST results are available for this feature:

BLAST of Spo03803.1 vs. NCBI nr
BLAST of Spo03803.1 vs. UniProtKB/TrEMBL
BLAST of Spo03803.1 vs. ExPASy Swiss-Prot
BLAST of Spo03803.1 vs. TAIR (Arabidopsis)

BLAST of Spo03803.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902167244\|gb\|KNA07345.1\|	4.6e-213	99.2	hypothetical protein SOVF_1727...	[more]
gi\|731342063\|ref\|XP_010682209.1\|	5.9e-176	80.1	PREDICTED: pre-mRNA-splicing f...	[more]
gi\|731342061\|ref\|XP_010682208.1\|	5.5e-166	72.2	PREDICTED: pre-mRNA-splicing f...	[more]
gi\|731342059\|ref\|XP_010682207.1\|	7.2e-166	72.4	PREDICTED: pre-mRNA-splicing f...	[more]
gi\|823147516\|ref\|XP_012473671.1\|	8.6e-151	71.8	PREDICTED: pre-mRNA-splicing f...	[more]

BLAST of Spo03803.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QJA2_SPIOL	3.2e-213	99.2	Uncharacterized protein OS=Spi...	[more]
A0A0J8C706_BETVU	4.1e-176	80.1	Uncharacterized protein OS=Bet...	[more]
G5DX06_SILLA	1.7e-169	77.1	Pre-mRNA-splicing factor (Frag...	[more]
G5DX07_SILLA	2.8e-169	77.1	Pre-mRNA-splicing factor (Frag...	[more]
A0A0D2R045_GOSRA	6.0e-151	71.8	Uncharacterized protein OS=Gos...	[more]

BLAST of Spo03803.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
PR38B_RAT	4.8e-45	37.0	Pre-mRNA-splicing factor 38B O...	[more]
PR38B_MOUSE	5.3e-44	37.0	Pre-mRNA-splicing factor 38B O...	[more]
PR38B_DANRE	4.5e-43	35.9	Pre-mRNA-splicing factor 38B O...	[more]
PR38B_HUMAN	5.5e-41	37.0	Pre-mRNA-splicing factor 38B O...	[more]
PRP38_ARATH	2.1e-8	26.9	Pre-mRNA-splicing factor 38 OS...	[more]

BLAST of Spo03803.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT5G37370.1	1.1e-135	67.9	PRP38 family protein	[more]
AT2G40650.1	1.2e-9	26.9	PRP38 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005037	Pre-mRNA-splicing factor 38	PANTHER	PTHR23142	UNCHARACTERIZED	coord: 246..644 score: 1.8E
IPR005037	Pre-mRNA-splicing factor 38	PFAM	PF03371	PRP38	coord: 250..402 score: 9.8
IPR024767	Pre-mRNA-splicing factor 38, C-terminal	PFAM	PF12871	PRP38_assoc	coord: 424..513 score: 3.
None	No IPR available	PANTHER	PTHR23142:SF3	SUBFAMILY NOT NAMED	coord: 246..644 score: 1.8E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000956	nuclear-transcribed mRNA catabolic process
biological_process	GO:0009651	response to salt stress
biological_process	GO:0009094	L-phenylalanine biosynthetic process
biological_process	GO:0006432	phenylalanyl-tRNA aminoacylation
biological_process	GO:0000162	tryptophan biosynthetic process
biological_process	GO:0006571	tyrosine biosynthetic process
cellular_component	GO:0009328	phenylalanine-tRNA ligase complex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004826	phenylalanine-tRNA ligase activity
molecular_function	GO:0000049	tRNA binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo15067	0.72	Barchart \| Table
Spo24698	0.71	Barchart \| Table
Spo09150	0.67	Barchart \| Table
Spo10784	0.66	Barchart \| Table
Spo20900	0.66	Barchart \| Table
Spo02855	0.65	Barchart \| Table