Spo03903 (gene)

Overview
NameSpo03903
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionSerine/arginine repetitive matrix protein 2, putative isoform 3
Locationchr1 : 46824597 .. 46828139 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCGATCTTTATCGCAAACTCTAACTCGTTTTTCCCCTCTTTCGAATTCTCTATCCACCGCCGCGTCTACCACCCGTCTGATAAACTTCCGACACCGGTCGAATTCGCCGGAGATTAATTCCGTTGAATTCCCGGTGGCGGAGGATACGGAGAAGGTGGCGATTAATACTCTGGAGGACGAAATCCATAACATAATTGTGAAGAGATCTCAACCTGACTGGATCCCTCTTGTTCCCGGTGCTTCTTATTGGGTCCCACCTAGGAGTAAGGCTCATGGGTATGCTAAAGTGATAAGGAAACTGGTTCATTGCTCCGCCGCCACGGCGAGGATGAAGGGTCATACTAATAAGTCGGTATCTCTTTCTTCGAGTCGTGGGTGGCCTTCTTCTGCTCATTACTTCAAAGGTGTTTGTTCTTATTCTGCTCATTTCACCTTTTTTTTTAGTTTGTAATTTATGTTTTGGGGAAAATATGACGATCTTGATTTGAAAATATTGGTTGATAATGATCTTTAACATGCAAGCATAACATGAAGAAGAGGATAGCATAATGCAATTACACTTCAAATTGTTTGGTTCATTTGAGAAAGTGATGATGATTAATCTCAATTTACTAGCTACGCATTAGCATGATTTGAGAGGAAAGCAAAACAATACAGTTAGCTTACCTCTATGATTGGTATGAGGATGTTTGCATTGCGTCTTTTTGGTTTGAATATGCTTGATTAGACTACTACTCCATTGAGAAATAATAGCCATGTATGTATACTATGTTGACTTGTTGAGATGTTCGGAAAATGTTGTCACTTTAGGCAAAAAAGATTACGGCCGAGTTGTGAGGGAAATATGATTGTTACAAAGGTATCTTGATTGTTACAAAGGTATCTTGGTGAAATCAGGTTGAGCTCTTAATTTTGACTTTTGAGGGTGTTGAGACGATGTCATGATCATAAATGGTATTCAAGTAGTCAGATAAGTGTAACTTTTCTGAAAGTTGGGAACTTGATGCTGGCAGGAGGTAGGGGTTAATGGGGGTATGAATTGGCTTGAGATGTTCGAAAAATGTTGTCACCTTTTTTTGTAAGAAAACAAAAAGATAATGATTCGGTAGTGAGCAAAATGGAAAGGATACATTGTTACAAAGGTGTCTTGGTGATGGTGAGAAATCGGGGTGAATTCTTAAATTTACAGGAGGATGTGATGGCAGCAGGTGGGGGTAAATGGGATTATGAATTGGCTTGAGATGTTCGAAAAATGTTGTCAAAAGAGATAATGATGGAGTATTGAGCAAAATGGGAAGGATACAATTATTACAAATGTGTCTTGGTGAGTTGGTGATGGTGAGAATTCGAGGTGAATTCTTAATTTTACAGGGTTTGGAGGATGTGATGATCATATATGGTGCTTGGACGAATGTAGCTTTTCTGAAAGCCAACCAAAGTGATGAATTGGCTTGAGATCAAAGTGATGTGGGCACTTCTAATCTTAGGTGCATATAAGTATATACTCAACACGGATATTGTGTTTTCTATTTTTAAAGTTGAGTAAAATGTAGTGCTCTGTTTTACATATGCATGATAGATGCTTCTTGATAGATTAGAAGTTTGCCAAAAAGGTGGTCTTTTTAATTTTGGTTGCAAGCTTGATTTTGGCTGAATTTAGGCGCATGAAAGACTTACGAAGGTAACCTAATTGCAGGAGGATCCCATTCTCCAATGGAGGGAGAGACAACATCTAAGTACGCATCACAATCAGAGGACGAGGAAGGGTAAATCTGTTCTTCAACAGAAAATTGTATCCAAGGTTAGTTAAGAGCTACCACCTCATATTTTGTTGTAAATGTTTGAATTATCTACATTCAGGGGAGGATGCCGTTAATACCAGGGTTATGCAGTTAATGTTTATTTTTAAAAAAATCAAGCAACGGATGAATCAGATGATTGAACTAACTTGCTGGTAATGAGTGTGTCCATAGTGCCACACTTCTTGGCTTAGTAGTCGTGAGTTCGAACCTAGTTAGTCCATTTTCCTACACTTCCAACTTCTAGTTTTTTTCCTTTATTATTTTATGATATTGGTAGCCATGTTTCTGAACAATTGCTTTCTTACTTCAACATCTCTATTCCAATCTCCTCATCCAATTATTAAAACTATTGTTTATATAGGATTACTTTTGGACCACAGAATAATACCGTATAAGGGACCCAAATAGTCGTCGATGAAATATACAGGCTATGAAAAACGGGTTTGGATTTTGTCTATATAAGTTTGCATACCCTATAAAGTAAATCCTAGATACGCCACTGTCTATGTTGGATAGAATGTTATCCTCATTGTGGGTTGTGCAATTCCGTGAAGCATAAAGAAGATAACTTAAACTCTGAAAGCACTGCTTAAATATAAATGTATATTAAGCTCTCTTTGCCGTCCATGCCTCGACATTTTCTTATTTCAACCCTTGGTCCTTTTCATTTAATTATGTTATCGGTTATTCAAAGCAAGTGTCAGTTTTTGGATGAAAGGAAAGGCCAGCTTTGCAAAATTTTGTAAACTATCAGTCTCCCTTTCCATTTGATTTGAAATTCCAAATTGTGTTTCATAATCTAGTTAGAGGTCCACAATCATTTCCGGTTTCCAGGAAGAATGTTCCATTAGTATTACTTGGGGCATTATCATACATTGCACAAACTTCTCAGACATTTTGCAACAATCTAGAGAGAAATTGATAGAGGAAAACAGGGAATTATTCCTCCTCTGAGTCATCACAGTATATCTCAATTTTCTTGTGCAAGACATTTGTTCATTGAGAAATCTGGCTACATTGATTAATGTTGCCTATATTTTAGAAAATTAAATGCAAATTCCATAAGATATGGTATCCGGCACCACCTGAGGATGATGATAAAGATTGTGATTGCAAATATGACAAATTGTGAACTTAGATGGTGGTGTTGTCTTTGTTGATCAATACTACCCAACAATTGTTTCCAGATAATGAGTTTGTCCACGTTTATGTACTTCCTTTTTTTGTTTAGGTTGTTAAGAACATTATCATTTTGTTACATTAAGTTGTCAAAGAATCCCGAATTTTTCAAATGAAATTGCAGACTTCCACCAACTGTAAATTATTTGTGGAGAAGGTGGGAACTTGACAGACAGATCGGGGGATTGAGAATTTCGACACATGATTGCTGAGCAGAAAGAAGGTGATGAGGAAGCAGCCTGATTTGGGCAAAAGATAAAAGATGGAGAGACAGGATTTTTTCAAGGTGAAAATCAACAACCGTTTACACTTATGAGAAAGAGAGTTGTATCTCCTTTGGAATGCTGGTTGGAAACTGTTTGTATGTAACTTTAGTGTAAAACAAAGATTTCAGCCTTGTGAATATTCGAATCTTGATCCATGTATCAATATCATGTATGTATAAGAGGTGTGGATATACAGATGTTTCAGTTGAAATTCAATAAGTATTCATTGGTAATTTTGTCTGGAAAGATTGTGTTGCAATTCTTTAGTAGGATTGTGGTTCTGAGTCTGCT

mRNA sequence

ATGGCTCGATCTTTATCGCAAACTCTAACTCGTTTTTCCCCTCTTTCGAATTCTCTATCCACCGCCGCGTCTACCACCCGTCTGATAAACTTCCGACACCGGTCGAATTCGCCGGAGATTAATTCCGTTGAATTCCCGGTGGCGGAGGATACGGAGAAGGTGGCGATTAATACTCTGGAGGACGAAATCCATAACATAATTGTGAAGAGATCTCAACCTGACTGGATCCCTCTTGTTCCCGGTGCTTCTTATTGGGTCCCACCTAGGAGTAAGGCTCATGGGGTCATACTAATAAGTCGGTATCTCTTTCTTCGAGTCGTGGGTGGCCTTCTTCTGCTCATTACTTCAAAGGAGGATCCCATTCTCCAATGGAGGGAGAGACAACATCTAAGTACGCATCACAATCAGAGGACGAGGAAGGGTAAATCTGTTCTTCAACAGAAAATTGTATCCAAGACTTCCACCAACTGTAAATTATTTGTGGAGAAGGTGGGAACTTGACAGACAGATCGGGGGATTGAGAATTTCGACACATGATTGCTGAGCAGAAAGAAGGTGATGAGGAAGCAGCCTGATTTGGGCAAAAGATAAAAGATGGAGAGACAGGATTTTTTCAAGGTGAAAATCAACAACCGTTTACACTTATGAGAAAGAGAGTTGTATCTCCTTTGGAATGCTGGTTGGAAACTGTTTGTATGTAACTTTAGTGTAAAACAAAGATTTCAGCCTTGTGAATATTCGAATCTTGATCCATGTATCAATATCATGTATGTATAAGAGGTGTGGATATACAGATGTTTCAGTTGAAATTCAATAAGTATTCATTGGTAATTTTGTCTGGAAAGATTGTGTTGCAATTCTTTAGTAGGATTGTGGTTCTGAGTCTGCT

Coding sequence (CDS)

ATGGCTCGATCTTTATCGCAAACTCTAACTCGTTTTTCCCCTCTTTCGAATTCTCTATCCACCGCCGCGTCTACCACCCGTCTGATAAACTTCCGACACCGGTCGAATTCGCCGGAGATTAATTCCGTTGAATTCCCGGTGGCGGAGGATACGGAGAAGGTGGCGATTAATACTCTGGAGGACGAAATCCATAACATAATTGTGAAGAGATCTCAACCTGACTGGATCCCTCTTGTTCCCGGTGCTTCTTATTGGGTCCCACCTAGGAGTAAGGCTCATGGGGTCATACTAATAAGTCGGTATCTCTTTCTTCGAGTCGTGGGTGGCCTTCTTCTGCTCATTACTTCAAAGGAGGATCCCATTCTCCAATGGAGGGAGAGACAACATCTAAGTACGCATCACAATCAGAGGACGAGGAAGGGTAAATCTGTTCTTCAACAGAAAATTGTATCCAAGACTTCCACCAACTGTAAATTATTTGTGGAGAAGGTGGGAACTTGA

Protein sequence

MARSLSQTLTRFSPLSNSLSTAASTTRLINFRHRSNSPEINSVEFPVAEDTEKVAINTLEDEIHNIIVKRSQPDWIPLVPGASYWVPPRSKAHGVILISRYLFLRVVGGLLLLITSKEDPILQWRERQHLSTHHNQRTRKGKSVLQQKIVSKTSTNCKLFVEKVGT
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo03903.1Spo03903.1mRNA


Homology
[Close]
BLAST of Spo03903.1 vs. NCBI nr
Match: gi|902201208|gb|KNA13940.1| (hypothetical protein SOVF_112130 [Spinacia oleracea])

HSP 1 Score: 187.2 bits (474), Expect = 2.300e-44
Identity = 96/102 (94.12%), Postives = 97/102 (95.10%), Query Frame = 1 

		  

Query: 1   MARSLSQTLTRFSPLSNSLSTAASTTRLINFRHRSNSPEINSVEFPVAEDTEKVAINTLE 60
           MARSLSQTLTRFSPLSNSLSTAASTTRLINFRHRSNSPEINSVEFPVAEDTEKVAINTLE
Sbjct: 1   MARSLSQTLTRFSPLSNSLSTAASTTRLINFRHRSNSPEINSVEFPVAEDTEKVAINTLE 60

Query: 61  DEIHNIIVKRSQPDWIPLVPGASYWVPPRSKAHGVILISRYL 103
           DEIHNIIVKRSQPDWIPLVPGASYWVPPRSKAHG   + R L
Sbjct: 61  DEIHNIIVKRSQPDWIPLVPGASYWVPPRSKAHGYAKVIRKL 102
[Close]
BLAST of Spo03903.1 vs. NCBI nr
Match: gi|870845663|gb|KMS98343.1| (hypothetical protein BVRB_4g093570 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 112.5 bits (280), Expect = 7.300e-22
Identity = 61/95 (64.21%), Postives = 70/95 (73.68%), Query Frame = 1 

		  

Query: 1  MARSLSQTLTRFSPLSNSLSTAASTTRLINFRHRSNSPEINSVEFPVAEDTEKVAINTLE 60
          MARSLSQ  T  S LSN   T +S TRL+N RHRSNSPEI       AE+ EKVAI  LE
Sbjct: 1  MARSLSQLRTHLSILSN---THSSATRLVNLRHRSNSPEILFSGDIPAEEIEKVAIKNLE 60

Query: 61 DEIHNIIVKRSQPDWIPLVPGASYWVPPRSKAHGV 96
          + IH IIVK+S+PDWIP VPGASYWVPP+SK+ G+
Sbjct: 61 EAIHKIIVKKSEPDWIPFVPGASYWVPPKSKSQGL 92
[Close]
BLAST of Spo03903.1 vs. NCBI nr
Match: gi|720055897|ref|XP_010273529.1| (PREDICTED: uncharacterized protein LOC104609040 [Nelumbo nucifera])

HSP 1 Score: 87.0 bits (214), Expect = 3.300e-14
Identity = 46/102 (45.10%), Postives = 66/102 (64.71%), Query Frame = 1 

		  

Query: 1   MARSLSQTLTRFSP---LSNSLSTAASTTRLINFRHRSNSPE---INSVEFPVAEDTEKV 60
           MAR +SQTL R S    LS+ L   A ++RL+N R+RSN  E   +  V+     + E +
Sbjct: 1   MARIISQTLIRTSSPTFLSSKLPPFAPSSRLVNHRNRSNRSEKAQLIEVDLDPESEVEVL 60

Query: 61  AINTLEDEIHNIIVKRSQPDWIPLVPGASYWVPPRSKAHGVI 97
            +  LE+ IH IIV+RS PDW+P +PG+SYWVPPR + +G++
Sbjct: 61  GLRRLEEAIHGIIVRRSAPDWLPFIPGSSYWVPPRKRPYGIV 102
[Close]
BLAST of Spo03903.1 vs. NCBI nr
Match: gi|720012560|ref|XP_010259901.1| (PREDICTED: uncharacterized protein LOC104599177 [Nelumbo nucifera])

HSP 1 Score: 85.9 bits (211), Expect = 7.300e-14
Identity = 47/104 (45.19%), Postives = 64/104 (61.54%), Query Frame = 1 

		  

Query: 1   MARSLSQTLTRFSP---LSNSLSTAASTTRLINFRHRSNSPE-----INSVEFPVAEDTE 60
           MAR LSQTL R S    LS+     A ++RL+N R RSN  E     +  V+     + E
Sbjct: 1   MARILSQTLIRVSSPSFLSSQSPPFAPSSRLVNHRSRSNRSEKVQAQVIEVDLDSENEVE 60

Query: 61  KVAINTLEDEIHNIIVKRSQPDWIPLVPGASYWVPPRSKAHGVI 97
            + +  LED IH IIV+RS PDW+P +PG+SYWVPPR + +G++
Sbjct: 61  VLGMRRLEDAIHGIIVRRSAPDWLPFIPGSSYWVPPRKRPYGIV 104
[Close]
BLAST of Spo03903.1 vs. NCBI nr
Match: gi|470136055|ref|XP_004303817.1| (PREDICTED: uncharacterized protein LOC101314195 [Fragaria vesca subsp. vesca])

HSP 1 Score: 79.7 bits (195), Expect = 5.200e-12
Identity = 48/99 (48.48%), Postives = 62/99 (62.63%), Query Frame = 1 

		  

Query: 1  MARSLSQTLTRFSPLSNSLSTAASTTRLINFRHRSNSPEINSVEFPVAEDTEKVA---IN 60
          MARSLSQTLT    LS   S+++S+ R I  R +SN P  +    P   D+       + 
Sbjct: 1  MARSLSQTLTLTRHLSPKTSSSSSS-RFITLRAQSNLPFHHDQTEPSPADSSPAVDPLLR 60

Query: 61 TLEDEIHNIIVKRSQPDWIPLVPGASYWV-PPRSKAHGV 96
           LED IH IIV++S PDW+P  PGASYWV PPRS++HG+
Sbjct: 61 KLEDAIHRIIVRKSAPDWLPFAPGASYWVPPPRSRSHGL 98
[Close]
BLAST of Spo03903.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R357_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_112130 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.600e-44
Identity = 96/102 (94.12%), Postives = 97/102 (95.10%), Query Frame = 1 

		  

Query: 1   MARSLSQTLTRFSPLSNSLSTAASTTRLINFRHRSNSPEINSVEFPVAEDTEKVAINTLE 60
           MARSLSQTLTRFSPLSNSLSTAASTTRLINFRHRSNSPEINSVEFPVAEDTEKVAINTLE
Sbjct: 1   MARSLSQTLTRFSPLSNSLSTAASTTRLINFRHRSNSPEINSVEFPVAEDTEKVAINTLE 60

Query: 61  DEIHNIIVKRSQPDWIPLVPGASYWVPPRSKAHGVILISRYL 103
           DEIHNIIVKRSQPDWIPLVPGASYWVPPRSKAHG   + R L
Sbjct: 61  DEIHNIIVKRSQPDWIPLVPGASYWVPPRSKAHGYAKVIRKL 102
[Close]
BLAST of Spo03903.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BE44_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g093570 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 5.100e-22
Identity = 61/95 (64.21%), Postives = 70/95 (73.68%), Query Frame = 1 

		  

Query: 1  MARSLSQTLTRFSPLSNSLSTAASTTRLINFRHRSNSPEINSVEFPVAEDTEKVAINTLE 60
          MARSLSQ  T  S LSN   T +S TRL+N RHRSNSPEI       AE+ EKVAI  LE
Sbjct: 1  MARSLSQLRTHLSILSN---THSSATRLVNLRHRSNSPEILFSGDIPAEEIEKVAIKNLE 60

Query: 61 DEIHNIIVKRSQPDWIPLVPGASYWVPPRSKAHGV 96
          + IH IIVK+S+PDWIP VPGASYWVPP+SK+ G+
Sbjct: 61 EAIHKIIVKKSEPDWIPFVPGASYWVPPKSKSQGL 92
[Close]
BLAST of Spo03903.1 vs. UniProtKB/TrEMBL
Match: A0A164ZX83_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_019803 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.400e-11
Identity = 49/109 (44.95%), Postives = 64/109 (58.72%), Query Frame = 1 

		  

Query: 1   MARSLSQTLTRFSPLSNSLSTAASTTRLIN-FRHRSNS----PEINSVEFPVA-----ED 60
           MAR + QTL R S  S+S S    + R++   RH SN     P++  V+   +     ED
Sbjct: 1   MARMVYQTLIRSSSSSSSYSFMCMSPRILTTHRHGSNQSGKQPQLIEVDLDSSSSSQNED 60

Query: 61  TEKVAINTLEDEIHNIIVKRSQPDWIPLVPGASYWVPP---RSKAHGVI 97
            E + I  LED IHNIIVKRS PDW+P +PG+SYWVPP   R +  GV+
Sbjct: 61  AEVLGIKKLEDVIHNIIVKRSAPDWLPFIPGSSYWVPPPRTRRRNQGVV 109
[Close]
BLAST of Spo03903.1 vs. UniProtKB/TrEMBL
Match: D7KEJ4_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_471880 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.200e-10
Identity = 44/105 (41.90%), Postives = 68/105 (64.76%), Query Frame = 1 

		  

Query: 1   MARSLSQTLT----RFSPLSNSLSTAASTTRLINFRHRSNSPEINSVEFPVAEDTEKVA- 60
           MARSLS++L+    RF+  S+SL  ++   +L++FR +S+   ++  E   A  ++  + 
Sbjct: 1   MARSLSRSLSLSKGRFATGSSSLPPSS---QLVSFRSQSSDRRVDLYEIDTAAASQSPSD 60

Query: 61  --INTLEDEIHNIIVKRSQPDWIPLVPGASYWVPP---RSKAHGV 96
             I  LED +H I V+R+QPDW+P VPGASYWVPP    S++HG+
Sbjct: 61  PLIQKLEDAVHRIFVRRAQPDWLPFVPGASYWVPPPGSGSQSHGI 102
[Close]
BLAST of Spo03903.1 vs. UniProtKB/TrEMBL
Match: M5XB67_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012774mg PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.200e-10
Identity = 46/97 (47.42%), Postives = 63/97 (64.95%), Query Frame = 1 

		  

Query: 1  MARSLSQTLTRFSPLSNSLSTAASTTRLINFRHRSNSPEINSVEFPVAEDTEK-VAINTL 60
          MARS+SQTLT    LS S S+ +S++RLI  R +SN P  +      + D+     +  L
Sbjct: 1  MARSISQTLTLTRHLS-SKSSPSSSSRLITLRAQSNLPFHHDPTTDSSTDSPSDPLLRKL 60

Query: 61 EDEIHNIIVKRSQPDWIPLVPGASYWV-PPRSKAHGV 96
          ED IH I+V+RS PDW+P +PG SYWV PPRS++ G+
Sbjct: 61 EDAIHRIMVRRSAPDWLPFLPGTSYWVPPPRSRSTGL 96
[Close]
BLAST of Spo03903.1 vs. TAIR (Arabidopsis)
Match: AT1G78890.1 (unknown protein)

HSP 1 Score: 71.2 bits (173), Expect = 6.600e-13
Identity = 46/102 (45.10%), Postives = 64/102 (62.75%), Query Frame = 1 

		  

Query: 1  MARSLSQTLT--RFSPLSNSLSTAASTTRLINFR---HRSNSPEINSV-EFPVAEDTEKV 60
          MARSLS +L+  R+   + SL   +S T  I  +    RSNS  +  + E  +A D    
Sbjct: 1  MARSLSPSLSLSRYRFAAASLLLPSSQTIFIRSQSSNRRSNSNHLGVIYEIDIAADP--- 60

Query: 61 AINTLEDEIHNIIVKRSQPDWIPLVPGASYWV-PPRSKAHGV 96
           +N LED +H I+V+RS PDW+P VPGAS+WV PPRS++HG+
Sbjct: 61 LVNKLEDAVHRIMVRRSAPDWLPFVPGASFWVPPPRSQSHGI 99
[Close]
BLAST of Spo03903.1 vs. TAIR (Arabidopsis)
Match: AT1G16840.4 (unknown protein)

HSP 1 Score: 69.7 bits (169), Expect = 1.900e-12
Identity = 42/105 (40.00%), Postives = 65/105 (61.90%), Query Frame = 1 

		  

Query: 1   MARSLSQTLT----RFSPLSNSLSTAASTTRLINFRHRSNSPEINSVEFPVAEDTEKVA- 60
           MARS S++L+    RF+  S+SL     ++ L++FR +S+    +  E   +  ++  + 
Sbjct: 1   MARSFSRSLSLSKGRFAAASSSL---LPSSHLVSFRSQSSDRRGDLYEIDTSAASQSPSD 60

Query: 61  --INTLEDEIHNIIVKRSQPDWIPLVPGASYWVPP---RSKAHGV 96
             I  LED +H I V+R+QPDW+P VPGASYWVPP    S++HG+
Sbjct: 61  PLIQKLEDAVHRIFVRRAQPDWLPFVPGASYWVPPPGSGSQSHGI 102
[Close]
BLAST of Spo03903.1 vs. TAIR (Arabidopsis)
Match: AT2G19180.1 (unknown protein)

HSP 1 Score: 50.1 bits (118), Expect = 1.600e-6
Identity = 34/94 (36.17%), Postives = 50/94 (53.19%), Query Frame = 1 

		  

Query: 1  MARSLSQTLT---RFSPLSNSLSTAASTT--RLINFRHRSNS-PEINSVEFPVAEDTEKV 60
          M+R LS+TL    RF  L    +  A TT   ++ F  R +S P++  +E     + E  
Sbjct: 1  MSRLLSKTLIPNGRF--LLRRFNEPAITTPPNVVCFSRRFSSIPQVIELEIDSKNEAEAA 60

Query: 61 AINTLEDEIHNIIVKRSQPDWIPLVPGASYWVPP 89
           +  L + +  IIV  S PDW+P  PG+S+WVPP
Sbjct: 61 ILKKLNEFVRRIIVHNSTPDWLPFAPGSSFWVPP 92
The following BLAST results are available for this feature:
BLAST of Spo03903.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902201208|gb|KNA13940.1|2.3e-4494.1hypothetical protein SOVF_1121... [more]
gi|870845663|gb|KMS98343.1|7.3e-2264.2hypothetical protein BVRB_4g09... [more]
gi|720055897|ref|XP_010273529.1|3.3e-1445.1PREDICTED: uncharacterized pro... [more]
gi|720012560|ref|XP_010259901.1|7.3e-1445.1PREDICTED: uncharacterized pro... [more]
gi|470136055|ref|XP_004303817.1|5.2e-1248.4PREDICTED: uncharacterized pro... [more]
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BLAST of Spo03903.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R357_SPIOL1.6e-4494.1Uncharacterized protein OS=Spi... [more]
A0A0J8BE44_BETVU5.1e-2264.2Uncharacterized protein OS=Bet... [more]
A0A164ZX83_DAUCA1.4e-1144.9Uncharacterized protein OS=Dau... [more]
D7KEJ4_ARALL1.2e-1041.9Putative uncharacterized prote... [more]
M5XB67_PRUPE1.2e-1047.4Uncharacterized protein OS=Pru... [more]
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BLAST of Spo03903.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo03903.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT1G78890.16.6e-1345.1unknown protein[more]
AT1G16840.41.9e-1240.0unknown protein[more]
AT2G19180.11.6e-636.1unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33972FAMILY NOT NAMEDcoord: 2..99
score: 3.4
NoneNo IPR availablePANTHERPTHR33972:SF2EXPRESSED PROTEINcoord: 2..99
score: 3.4

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0006094 gluconeogenesis
biological_process GO:0080005 photosystem stoichiometry adjustment
biological_process GO:0009767 photosynthetic electron transport chain
biological_process GO:0009409 response to cold
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0042744 hydrogen peroxide catabolic process
biological_process GO:0009555 pollen development
biological_process GO:0042732 D-xylose metabolic process
biological_process GO:0010207 photosystem II assembly
biological_process GO:0016556 mRNA modification
biological_process GO:0006096 glycolytic process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0010190 cytochrome b6f complex assembly
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009909 regulation of flower development
biological_process GO:0007623 circadian rhythm
biological_process GO:0006661 phosphatidylinositol biosynthetic process
cellular_component GO:0005730 nucleolus
cellular_component GO:0048046 apoplast
cellular_component GO:0005829 cytosol
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009579 thylakoid
cellular_component GO:0008287 protein serine/threonine phosphatase complex
cellular_component GO:0016020 membrane
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0000785 chromatin
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0042651 thylakoid membrane
cellular_component GO:0009523 photosystem II
cellular_component GO:0031410 cytoplasmic vesicle
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0005515 protein binding
molecular_function GO:0003682 chromatin binding
molecular_function GO:0004722 protein serine/threonine phosphatase activity
molecular_function GO:0004034 aldose 1-epimerase activity
molecular_function GO:0030246 carbohydrate binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0003677 DNA binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo001240.80Barchart | Table
Spo058160.79Barchart | Table
Spo232490.79Barchart | Table
Spo258170.79Barchart | Table
Spo135830.75Barchart | Table
Spo233820.75Barchart | Table
Spo115090.75Barchart | Table
Spo229980.73Barchart | Table
Spo260450.73Barchart | Table
Spo173380.73Barchart | Table
Spo191230.73Barchart | Table
Spo257870.72Barchart | Table
Spo132100.72Barchart | Table
Spo137600.72Barchart | Table
Spo120290.72Barchart | Table
Spo029470.72Barchart | Table
Spo044330.72Barchart | Table
Spo068850.72Barchart | Table
Spo007500.72Barchart | Table
Spo197880.72Barchart | Table
Spo176120.72Barchart | Table
Spo223640.71Barchart | Table
Spo153890.71Barchart | Table
Spo269750.71Barchart | Table
Spo024050.71Barchart | Table
Spo024860.71Barchart | Table
Spo001140.71Barchart | Table
Spo172500.71Barchart | Table
Spo077780.71Barchart | Table
Spo187460.70Barchart | Table
Spo242690.70Barchart | Table
Spo001720.70Barchart | Table
Spo174970.70Barchart | Table
Spo200500.70Barchart | Table
Spo024060.70Barchart | Table
Spo024540.70Barchart | Table
Spo153900.69Barchart | Table
Spo002050.69Barchart | Table
Spo247960.69Barchart | Table
Spo115240.69Barchart | Table
Spo171610.69Barchart | Table
Spo051250.69Barchart | Table
Spo188280.69Barchart | Table
Spo108610.69Barchart | Table
Spo002140.69Barchart | Table
Spo281890.69Barchart | Table
Spo147790.69Barchart | Table
Spo134510.69Barchart | Table
Spo232380.69Barchart | Table
Spo052190.69Barchart | Table
Spo022520.68Barchart | Table
Spo006670.68Barchart | Table
Spo016160.68Barchart | Table
Spo024820.68Barchart | Table
Spo025130.68Barchart | Table
Spo029150.68Barchart | Table
Spo061410.68Barchart | Table
Spo080340.68Barchart | Table
Spo094200.68Barchart | Table
Spo103600.68Barchart | Table
Spo111930.68Barchart | Table
Spo113700.68Barchart | Table
Spo161900.68Barchart | Table
Spo175650.68Barchart | Table
Spo208900.68Barchart | Table
Spo257390.68Barchart | Table
Spo260130.68Barchart | Table
Spo273520.68Barchart | Table
Spo129340.67Barchart | Table
Spo123020.67Barchart | Table
Spo119510.67Barchart | Table
Spo106530.67Barchart | Table
Spo097690.67Barchart | Table
Spo076230.67Barchart | Table
Spo224510.67Barchart | Table
Spo068290.67Barchart | Table
Spo231720.67Barchart | Table
Spo049410.67Barchart | Table
Spo232860.67Barchart | Table
Spo038580.67Barchart | Table
Spo271220.67Barchart | Table
Spo012350.67Barchart | Table
Spo154990.67Barchart | Table
Spo261680.67Barchart | Table
Spo137830.67Barchart | Table
Spo002830.66Barchart | Table
Spo142320.66Barchart | Table
Spo019540.66Barchart | Table
Spo232350.66Barchart | Table
Spo052330.66Barchart | Table
Spo041420.66Barchart | Table
Spo235040.66Barchart | Table
Spo261830.66Barchart | Table
Spo240680.66Barchart | Table
Spo108640.66Barchart | Table
Spo041220.66Barchart | Table
Spo103160.66Barchart | Table
Spo149380.66Barchart | Table
Spo223090.66Barchart | Table
Spo253070.66Barchart | Table
Spo135750.65Barchart | Table
Spo003610.65Barchart | Table
Spo101710.65Barchart | Table
Spo017920.65Barchart | Table