Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAACAGAGGCAAAATGACAAGGGCCAACCAAAACTATCGAATTTATGGTTCACAAAGCCCAACCAGATTATCGGCCCAATCAATCCCATAACAGTGACAACATCTCCAAAATCAGAAAGAGAGGGAGAGGATAAGCCAAAATGACAACACTGCAACTAATACCATCACACTGCCGTCCTTCCCTCCTCTCGCCGGGAAAATCTATTTCCCGTCACCGGAAATTCATTGTTCGATGCTCAGATGAACGCCTGACGCTTTTTAGCCGCATTGCTCCTGTTTACGACAGCGTATGCATTCTCAATCAATTGTGTTTTCCTGTAAATTTCACTTCAATTATGCTTTTACTTCTCCTTTCGATGATTAATTTGCCGATTTCCCCCTCTTTTTTTTGGAAAATCTAAAACTGAATTTTTTCCCGCAGTTGAATGATTTGCTCAGCTTAGGGCAACACCGTGTTTGGAAGCGCATGGCCGTGTCCTGGAGCGGGTAAATTTTCACCATTGTTCTCAAATTTGTACAGCATAATTCTGGTTATAATTTTTATCTTTGATTATTTGAAGTTTAATTGTGTGTCAAAATTTTTACAATTTATTTGAAGTGTAATCGTTGAACATTTTGTAATATACCCAATTATCCTTGATCCTTGCATTTTTAACCAATTAGCAAATGTATTTTTGGTTTTGTTTCTCCTATTTCATTTGAATCGATTAGAAATAGCTTTAGATTGTCACCAATGTAGTGATCATCACTGTTTAACCTTTGATTGATTAGGTATTTAGGTCATTCATATGAAATTGACCTTTTTTTTGATGATATTTGGATAAGAAGTTAGAGAAGGCACTTGTTTTAGAAAATATGGATAGTATAAATGAAGTATTTAAAAACTTTTCGTTGTTGTGATGTGGTTGAAATAGTATCTTTTAGTTGTGTAAGAATAGGATTTTTGTTATACTTCTGTAAGATGTCTCAAGTGATACATCGATGATAAACTTCACCTGTTGCAGAAATGTTATAATTGGAGACATTAGGGTTATTTTAATACTAGTATGGTTCCAGACTTCCTATTATGTGTGCATGAAGAAGAGAAGAAGTGAATAATGTTTTGACTGTTGAAATGCTTGAAAGGGCGAGCTTGTTGTATTGGTGAAAGAAAAGGGCTCTGTTGCAGTAACCAACACGTTTAGGAAAAGGTTAATCTAATTTGAAGGACATGGATAAGTTTAACTTTTAATTGGGGAGCATTTTATGCCTTTTCTTCTTGTGGCAAGGGACGTTATGGGAAATGTGTATGATTATACATGTAAATGGAATTATTTAACTCCTGTCAAGATAAATAAAATAAATCAACATACTGATAATATGTGTTCCAAACTTCTGTGTTTAAACATAATTTCCCAAACAACAAAGCATGTAATTTGGATTCCAAACTTATGTGTTTTTAACATAACTTTCCAAACTTCTTTTTGAAAACATGATTAGTTTCCTTTCTGTCATTTCTATATTGGCAACAGTGCAAAGAGAGGGGATAGTGTGTTGGACATATGCTGCGGAAGTGGGGATTTGGCGTTTCTTTTGTCCGAAAAAGTTGGCCTTGATGGACAGGTCTTCAGTTTCTTTGTCTGTCTTTGTGAAAGTGTACCTACCTAGATTTCTGTGCGTCACACTAGGTGTCTACTTGCAGGTGACCGGTTTGGATTTTTCGAGGAACCAATTGTTAGTTGCTTCATTGCGGCAGAAAGAAAGGTCAACTCCCTGCTACAAAAACATAGAGTGAGCACTGGTAATTCTGGGGATGTTGTTCGAGTATTCCGTTTGTATACAATTTCATAAGAGGGAGTTAAATTTGTAGCTAATGCACCACAGGTGGTTGGAAGGTGATGCACTTAATTTACCATTCCGTGATGATCATTTTGATGCCATCACAATGGGTTATGGATTGAGGAACGTAAGAGATAAAGAGAGAGCTATAGAAGAGATATATCGAGTTCTTAAACCAGGTCTTGTCGATCTCTTCAATTGCCTGCACATTTATGGAGGAGATTATATCTTTTATGTAGTAAAATGGTGAATTTCTTTGTTAGGATGCAAGGCTTCAATCCTCGATTTTAATAAAAGCATGGAACCGATCACTGGTGTAATCCAGGTATTGTTTTTACAGAGTTTATAGCTGAGACATGAATTCTGTTGTGTACTTGTGTTTGGCTTTTGTGGCACCCTACAGCTACAGATTGGTGTTCATTTTTTTTGTATTCTAAGAAATTTATGCCATTAACTATGAATAAGAGTGTATTTGGTTACTAACTTGTACATAAGAATATATATGAGTACTTGAAAAATTATAGAATGTTGCAGTATATTAGAAAGTAGACAATTATTCCCTGTAAGGCTGCTTTAATTTACCCTGAATTTCATTTGCAATCGTCCAAAATAGCATATAGGAGTAGTTAATTTATAAAGAGAGTTGAGCTTGATATTCTATTTCCATGATGAATATTTATGATATTTGTTGCATTATTTGAATCTCATAGCTTCAGCTGCACTTAAAGCAATGCACAATGAATGAAAGAATAATTTTTCTTTTATTTATATTTTGCTTGTTATCTAGGAATTGATGATAGACAATGTCGTTGTTCCTATTGCTACTAGCTATGGCCTGGCTGAGGAGTACAGATATCTGAAAAGCTCAATTCAGGAGTTTCTGACAGGTGAGTGCAATAAATTTACCCAATAATTCGGGTTTGTGTAGCGTAGATTGGTTATGTGGGCACTCTCTTCAATTCTTAATTCTTACTGAAGTTTCATATGATGCATTTTCTTTTTAAATGCTTCTGTTTGTGTTTGTTAAGAATGCCACAAGGGGAAACTAGTGTGTTTGGATACGGTAATTTGGAGGAGGAGAGAAAGTGAAGGGTTGATTTTTCTTTGTTTGGATATGACTCGTGAGGAGGGACGGGAAGTGAATTAAGGGGATCCATCGTCCTCTCCCTTTTAATAAATAATCCTTCCAATGTTGGAAGTTTGGAACTATTTGAGAGGAAAATGCAAGCTCACTCCTTCAATCCCTTCACCTCCCTTTCCTTTCCCTCTCTTTCCCTCGCTTGTCCATCCTTCCATCATAACTATTTATACATACTTTTATTAATTTGTAAGAAGACTTCAAGAGGGCACCTAGTTGCATACTTGCATTCAATCTTTGAGGTTGTCTTGGTGCAGGAAAGGAATTGGAGCAGCTAGCTCTTGCGGTTGGGTTTTCAGATGTCAAATTTTACGAGATTGCTGGTGGACTCATGGGGAATCTGGTGGCTACTCGCTAAGTGGATCTGTTCCTTTAGGCTGTTACTCCATGGATCTGTCTGTTTGATGAAAAAAGGGACGTACATCAGCTATGTGCATCATTCAATAGTTTAGTATGAATTCCTAGCTTCTGTTTCTCCATGTTATATTTTTATCTGTTTCTAATACATATTGGATAAATTTTAAATGTAATGAGTTTTAACTTTTAATGTTAATAGTATTACTTTTATGACTTCATTATTGTCCTCGTTTGCCTTTTGCTCTTGTCATGCGCCTGGAATTATGAGCACTTTGAATAGAAACTATAAGTTCTTGCTTTCTAACTTGCCATTCATTAGCATCTTTCGTTCTGGGATTAAAGGACCTTTTAACACCCAAAAAGAGGAAGAGATTTAGAAAGATTATACAGTTGCAAAGTAAAAAGAGGACATTTATGATAAATGTCGAACTTGGCCCTATTTGAATAGATTTCTTGTCGTGGATGTATGATAAGAATAGAGTTGTCTATTCACCAACTACATGTCTAGGATATTCTCACTTTGTTGATGGTCTCCTTTCTAGTTGCTGCTGCTGAAAATTATG AGAACAGAGGCAAAATGACAAGGGCCAACCAAAACTATCGAATTTATGGTTCACAAAGCCCAACCAGATTATCGGCCCAATCAATCCCATAACAGTGACAACATCTCCAAAATCAGAAAGAGAGGGAGAGGATAAGCCAAAATGACAACACTGCAACTAATACCATCACACTGCCGTCCTTCCCTCCTCTCGCCGGGAAAATCTATTTCCCGTCACCGGAAATTCATTGTTCGATGCTCAGATGAACGCCTGACGCTTTTTAGCCGCATTGCTCCTGTTTACGACAGCTTGAATGATTTGCTCAGCTTAGGGCAACACCGTGTTTGGAAGCGCATGGCCGTGTCCTGGAGCGGTGCAAAGAGAGGGGATAGTGTGTTGGACATATGCTGCGGAAGTGGGGATTTGGCGTTTCTTTTGTCCGAAAAAGTTGGCCTTGATGGACAGGTGACCGGTTTGGATTTTTCGAGGAACCAATTGTTAGTTGCTTCATTGCGGCAGAAAGAAAGGTCAACTCCCTGCTACAAAAACATAGAGTGGTTGGAAGGTGATGCACTTAATTTACCATTCCGTGATGATCATTTTGATGCCATCACAATGGGTTATGGATTGAGGAACGTAAGAGATAAAGAGAGAGCTATAGAAGAGATATATCGAGTTCTTAAACCAGGATGCAAGGCTTCAATCCTCGATTTTAATAAAAGCATGGAACCGATCACTGGTGTAATCCAGGAATTGATGATAGACAATGTCGTTGTTCCTATTGCTACTAGCTATGGCCTGGCTGAGGAGTACAGATATCTGAAAAGCTCAATTCAGGAGTTTCTGACAGGAAAGGAATTGGAGCAGCTAGCTCTTGCGGTTGGGTTTTCAGATGTCAAATTTTACGAGATTGCTGGTGGACTCATGGGGAATCTGGTGGCTACTCGCTAAGTGGATCTGTTCCTTTAGGCTGTTACTCCATGGATCTGTCTGTTTGATGAAAAAAGGGACGTACATCAGCTATGTGCATCATTCAATAGTTTAGTATGAATTCCTAGCTTCTGTTTCTCCATGTTATATTTTTATCTGTTTCTAATACATATTGGATAAATTTTAAATGTAATGAGTTTTAACTTTTAATGTTAATAGTATTACTTTTATGACTTCATTATTGTCCTCGTTTGCCTTTTGCTCTTGTCATGCGCCTGGAATTATGAGCACTTTGAATAGAAACTATAAGTTCTTGCTTTCTAACTTGCCATTCATTAGCATCTTTCGTTCTGGGATTAAAGGACCTTTTAACACCCAAAAAGAGGAAGAGATTTAGAAAGATTATACAGTTGCAAAGTAAAAAGAGGACATTTATGATAAATGTCGAACTTGGCCCTATTTGAATAGATTTCTTGTCGTGGATGTATGATAAGAATAGAGTTGTCTATTCACCAACTACATGTCTAGGATATTCTCACTTTGTTGATGGTCTCCTTTCTAGTTGCTGCTGCTGAAAATTATG ATGACAACACTGCAACTAATACCATCACACTGCCGTCCTTCCCTCCTCTCGCCGGGAAAATCTATTTCCCGTCACCGGAAATTCATTGTTCGATGCTCAGATGAACGCCTGACGCTTTTTAGCCGCATTGCTCCTGTTTACGACAGCTTGAATGATTTGCTCAGCTTAGGGCAACACCGTGTTTGGAAGCGCATGGCCGTGTCCTGGAGCGGTGCAAAGAGAGGGGATAGTGTGTTGGACATATGCTGCGGAAGTGGGGATTTGGCGTTTCTTTTGTCCGAAAAAGTTGGCCTTGATGGACAGGTGACCGGTTTGGATTTTTCGAGGAACCAATTGTTAGTTGCTTCATTGCGGCAGAAAGAAAGGTCAACTCCCTGCTACAAAAACATAGAGTGGTTGGAAGGTGATGCACTTAATTTACCATTCCGTGATGATCATTTTGATGCCATCACAATGGGTTATGGATTGAGGAACGTAAGAGATAAAGAGAGAGCTATAGAAGAGATATATCGAGTTCTTAAACCAGGATGCAAGGCTTCAATCCTCGATTTTAATAAAAGCATGGAACCGATCACTGGTGTAATCCAGGAATTGATGATAGACAATGTCGTTGTTCCTATTGCTACTAGCTATGGCCTGGCTGAGGAGTACAGATATCTGAAAAGCTCAATTCAGGAGTTTCTGACAGGAAAGGAATTGGAGCAGCTAGCTCTTGCGGTTGGGTTTTCAGATGTCAAATTTTACGAGATTGCTGGTGGACTCATGGGGAATCTGGTGGCTACTCGCTAA MTTLQLIPSHCRPSLLSPGKSISRHRKFIVRCSDERLTLFSRIAPVYDSLNDLLSLGQHRVWKRMAVSWSGAKRGDSVLDICCGSGDLAFLLSEKVGLDGQVTGLDFSRNQLLVASLRQKERSTPCYKNIEWLEGDALNLPFRDDHFDAITMGYGLRNVRDKERAIEEIYRVLKPGCKASILDFNKSMEPITGVIQELMIDNVVVPIATSYGLAEEYRYLKSSIQEFLTGKELEQLALAVGFSDVKFYEIAGGLMGNLVATR Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo03933.1 vs. NCBI nr
Match: gi|902228860|gb|KNA21291.1| (hypothetical protein SOVF_044500 [Spinacia oleracea]) HSP 1 Score: 530.8 bits (1366), Expect = 1.400e-147 Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 1
BLAST of Spo03933.1 vs. NCBI nr
Match: gi|731367816|ref|XP_010695815.1| (PREDICTED: 2-phytyl-1,4-beta-naphthoquinone methyltransferase, chloroplastic [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 437.2 bits (1123), Expect = 2.000e-119 Identity = 210/253 (83.00%), Postives = 229/253 (90.51%), Query Frame = 1
BLAST of Spo03933.1 vs. NCBI nr
Match: gi|703113581|ref|XP_010100423.1| (2-phytyl-1,4-beta-naphthoquinone methyltransferase [Morus notabilis]) HSP 1 Score: 370.9 bits (951), Expect = 1.800e-99 Identity = 183/250 (73.20%), Postives = 207/250 (82.80%), Query Frame = 1
BLAST of Spo03933.1 vs. NCBI nr
Match: gi|645230265|ref|XP_008221857.1| (PREDICTED: 2-phytyl-1,4-beta-naphthoquinone methyltransferase, chloroplastic isoform X1 [Prunus mume]) HSP 1 Score: 367.1 bits (941), Expect = 2.600e-98 Identity = 181/262 (69.08%), Postives = 211/262 (80.53%), Query Frame = 1
BLAST of Spo03933.1 vs. NCBI nr
Match: gi|596287945|ref|XP_007225857.1| (hypothetical protein PRUPE_ppa010196mg [Prunus persica]) HSP 1 Score: 365.2 bits (936), Expect = 9.900e-98 Identity = 180/262 (68.70%), Postives = 212/262 (80.92%), Query Frame = 1
BLAST of Spo03933.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RP30_SPIOL (2-phytyl-1,4-beta-naphthoquinone methyltransferase, chloroplastic OS=Spinacia oleracea GN=MENG PE=3 SV=1) HSP 1 Score: 530.8 bits (1366), Expect = 9.500e-148 Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 1
BLAST of Spo03933.1 vs. UniProtKB/TrEMBL
Match: Q20CF1_BETVU (2-phytyl-1,4-beta-naphthoquinone methyltransferase, chloroplastic OS=Beta vulgaris GN=MENG PE=3 SV=1) HSP 1 Score: 437.2 bits (1123), Expect = 1.400e-119 Identity = 210/253 (83.00%), Postives = 229/253 (90.51%), Query Frame = 1
BLAST of Spo03933.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B807_BETVU (2-phytyl-1,4-beta-naphthoquinone methyltransferase, chloroplastic OS=Beta vulgaris subsp. vulgaris GN=MENG PE=3 SV=1) HSP 1 Score: 437.2 bits (1123), Expect = 1.400e-119 Identity = 210/253 (83.00%), Postives = 229/253 (90.51%), Query Frame = 1
BLAST of Spo03933.1 vs. UniProtKB/TrEMBL
Match: W9RCM0_9ROSA (2-phytyl-1,4-beta-naphthoquinone methyltransferase, chloroplastic OS=Morus notabilis GN=MENG PE=3 SV=1) HSP 1 Score: 370.9 bits (951), Expect = 1.300e-99 Identity = 183/250 (73.20%), Postives = 207/250 (82.80%), Query Frame = 1
BLAST of Spo03933.1 vs. UniProtKB/TrEMBL
Match: M5XNI2_PRUPE (2-phytyl-1,4-beta-naphthoquinone methyltransferase, chloroplastic OS=Prunus persica GN=MENG PE=3 SV=1) HSP 1 Score: 365.2 bits (936), Expect = 6.900e-98 Identity = 180/262 (68.70%), Postives = 212/262 (80.92%), Query Frame = 1
BLAST of Spo03933.1 vs. ExPASy Swiss-Prot
Match: MENG_ARATH (2-phytyl-1,4-beta-naphthoquinone methyltransferase, chloroplastic OS=Arabidopsis thaliana GN=MENG PE=1 SV=2) HSP 1 Score: 337.0 bits (863), Expect = 1.800e-91 Identity = 166/245 (67.76%), Postives = 196/245 (80.00%), Query Frame = 1
BLAST of Spo03933.1 vs. ExPASy Swiss-Prot
Match: MENG_NOSP7 (2-phytyl-1,4-naphtoquinone methyltransferase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=menG PE=3 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 1.100e-64 Identity = 124/232 (53.45%), Postives = 159/232 (68.53%), Query Frame = 1
BLAST of Spo03933.1 vs. ExPASy Swiss-Prot
Match: MENG_NOSS1 (2-phytyl-1,4-naphtoquinone methyltransferase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=menG PE=3 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 2.400e-64 Identity = 115/224 (51.34%), Postives = 158/224 (70.54%), Query Frame = 1
BLAST of Spo03933.1 vs. ExPASy Swiss-Prot
Match: MENG_ANAVT (2-phytyl-1,4-naphtoquinone methyltransferase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=menG PE=3 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 1.000e-62 Identity = 114/230 (49.57%), Postives = 158/230 (68.70%), Query Frame = 1
BLAST of Spo03933.1 vs. ExPASy Swiss-Prot
Match: MENG_SYNE7 (2-phytyl-1,4-naphtoquinone methyltransferase OS=Synechococcus elongatus (strain PCC 7942) GN=menG PE=3 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 2.500e-61 Identity = 116/221 (52.49%), Postives = 151/221 (68.33%), Query Frame = 1
BLAST of Spo03933.1 vs. TAIR (Arabidopsis)
Match: AT1G23360.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 337.0 bits (863), Expect = 1.000e-92 Identity = 166/245 (67.76%), Postives = 196/245 (80.00%), Query Frame = 1
BLAST of Spo03933.1 vs. TAIR (Arabidopsis)
Match: AT5G57300.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 115.2 bits (287), Expect = 6.300e-26 Identity = 70/233 (30.04%), Postives = 112/233 (48.07%), Query Frame = 1
BLAST of Spo03933.1 vs. TAIR (Arabidopsis)
Match: AT1G36310.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 53.9 bits (128), Expect = 1.700e-7 Identity = 40/136 (29.41%), Postives = 63/136 (46.32%), Query Frame = 1
BLAST of Spo03933.1 vs. TAIR (Arabidopsis)
Match: AT3G63410.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 50.8 bits (120), Expect = 1.500e-6 Identity = 38/105 (36.19%), Postives = 53/105 (50.48%), Query Frame = 1
BLAST of Spo03933.1 vs. TAIR (Arabidopsis)
Match: AT5G13710.1 (sterol methyltransferase 1) HSP 1 Score: 49.7 bits (117), Expect = 3.200e-6 Identity = 31/106 (29.25%), Postives = 51/106 (48.11%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo03933.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo03933.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo03933.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo03933.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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