Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGTACCCTTCAAAGTTGGAGTTCAGTGAGAATCTCAATCTCTCTGTTGCTTCCTTGATTAAGTCGTCAATTTCACTGATCCCATGTGGTATTTCTCCCAAGTGTACCAATCTCTCAATCTTACTTTTGAAACACAACCCTCTCGAGGTAATCCCAGAATCATTTTTCTTGCACATGCGTTGCCTTCGTGTTCTGAATCTATCTGATACTCGTATTACTAGACTTCCCAGTACTATTGAGGCTTTAGAAGAGCTTCAAGTCCTAGATCTTAGCAGTTGTCAGAAACTGAAACAAGTGCCCCCACTGTCAAAACTTGTTAAACTAAAGTTCTTGGACCTCTCTGAAACTGCAGTTGAGCAGGTTCCTCGCTGTCTTGAAATGTTAGAAAGGCTCACAGAGCTCAACCTATCATCTATACCTGAACCAAAACAGTTTCCTAAGGGGTTCTTGTCTACCCTATACAGCTTAAAGAGTCTGTCTTGTCATGTTGAAGGCATAATTCATGAGCTTCAACATCTGAAATCATTGGACATTCTTGATGCTACATTTGACAATCTTTCTGACCTGAGTATTTACGTAAGGTCACAGCATTGGCGCACATTAGAGTGCTTCCATTTACAGGTTGGTAAACAAATAACACCGAGGAAATCATACAGCAGAGGAGTATCCCTTCATGGCTGTATCTTGAATGAAAAAACTCTGCTAATACCAGATGACATTCGAGAGCTTTATGTTGATGATTGCAGGGGTTTCTGCAGCCTATCTGATATCCTGTGTCACAACAATGTTTCAACCCTAGAAATATGCAGCATTAGTAGATGCCAAGATGTTGAGAAACTTCTTACACGAGGTTGTATACAGAATCTACAGTACCTTGAATCATTAAAGGTTGAAGAATGTCCACAGTTAAAAGACTTAATAGTAGAGGAGGAGGTTGGCAAACCTGCTGTCATTGATCTCCCACAACTGAAGGAGCTAGTTCTCACCTCGTTACCTCAACTGAATAACATCTATGAGGGTCGACTAGTTTGTACTTCTCTTCGGTTATTTACAGTAATGGACTGTCTAAACCTGAAGCGCCTTCCATTCTCCTATACCAAAGATGTAAGAACATTAGGTTACTTTTATCATTAGTTAGGTTACTTTTATCATTGGTTGGGGGTCACTTTTATTATTAGTTAGGGTTACTTTTATCGTTGGTTATGGTCACTTTTATTGTTAGATAGGGTCACTTTTATCCTTAACTAGTGTTACATTTATCCGAAAACGGTAAAAGTCACTTAGAAAACATCTAATATAATGAAAAAAACATAAGATTAGAATATTCCAAGCACCATCTAGACACGCTAGGCTATGCAGGACTTGAACCCACACCATGTACGTTATTGCACATTGCTCTACCATTTGAGCTAATAGCCTTGAAAACATACATTTGCCACATTCAAAACACTAGTACAAGGGGCCTAAATTGGGGAGGAAACAAGAGGTTAAGGATACAGAGAGTAGCTATATGTTTGTGTTGTAGTAGCATGTTGGGCAAAGAAGGATGGTCATGAAAGAAGGGTAACTAACTAGTTAATCATAAAACACCTTTATGTGAAATGCAAGAAGAAAATTATTTATGATGAGCAGTTAAATGTTCTGTGGTCATGAAAGATAATGAATCAAACATATATGGGTTTTAACTTTTAAGGTAGTCCATTTCCAGCATATATTAGGCCAATACCATACCAACATTACAAACCTAAATAATGTTAGATCATGTTCAATGAACACCATTTATTACATCCAATTATCTGAGATAAACAACAATTGGTCAATTCCTAAGTGTATATTCAAAGTTTCAAGGTTATAACAGATTCAGACATCAAAATATGAAAAAACAAGAATCATACAACCTGGCCAGAAGAGCACCCGGCTTGAATCTGGATTAGTCTGAACTTAATAGACTTAGGCTACGGATTACCATGTTAGGTACCCTAAAAAACAAAACTACTACTCAATTTTACTTAAAAAGTTGAGACGAACCTGCACGGGTGTGCCATTAGTATTTAGTAGCAGCACGTTGAAGACCCTTCTTCAATATGAAACTATGAAACTGGTCCAAATCAACACACTTGACCTCACTGCTAATACGAACCCCCTTACATTATCCTCAGCCATTAACAAAAAATTTAAATAATTCAGGCAAAATACGGTTTATGCACCCGTGTGTACAATGTTCCCTGTGCACCCTGTTTTTCAATGAACATATAGTTCAAATACAAAGAACATATTGTTTATACCCAAAGAACATATAGCCAATGAAAATATAGTTCAAATCCATAGAACATATAGTTTAAATATTTTACTAGTACATGTATATTGAAATGATCCTCCGTGTTCATTAAATTTTCAATAAATGTTCAACGGGGTGCACGCACTGTGCACCCGGGTGTATAATCCAAATTGCATAATTCAGGTAAATTATACGCAATTAACGGCAACATTGACAAACACACAGAGAATTATACAACACTAGCAGGCTAACAGCTTTGCCCTTTAGTTTAAACATCAACTTGTTAGTAAAATCAACCAATATCAAATCAACCAGAAACGAACAAGTCAACAAAATTCACCCTCACAATATTCAGTTCACCAATTTACCTATAAAAAACGATAAATTAACTCACCTTATATATAATACTGATGGTGTTAAGATATGTTAAGATATTAGATATTATTCTGTGAATATTCTGTAGAGTCCTAAATATGGTATGTTACCTAATATGAGTCCTACATATGGTATGTTACCTAATATGTAATCTAGGGTTTAGGTAATGAGTTGTACTATATATATACGTGTGTTATTAATGAGAAGGATACGAGATTACACAATATTTGACATGGTATCAAGAGCTTAGGGAGATCCTACGACCCGTCTACAAAAAAGAAAAAAAAAATAAAAAAATTATCCCCTGCCGGTGGGTTAGAAGATGAGGTTTGTGTTGGAGAAAAGACTCGTACTTGGAATCGCGTCCAATTCGAGTATTCATATTGAGATAATTGGTGAGTTCGAAAAGAAAGGCGTTCTCATCAAGAGAGAGAAAAAAAAAAAAGTGCAGATTCGAAAAGAATGGCGTTCTTGCTCGATTTTTTTTAATCGAAGAATGGTGATTCCAATCGCAACGTTCGTGAAACTGCCGTTACGATTGAGGGAGGGAGTTAAGGATAACGTAGTTATCCTAGAGGATAGAATATCATATGAGATAGAGTTATGTTATATGATACGGGTGATACTGAGGGAGTGTCGTCACCTACGGGTGATACTGAGGGAGTGTTGTCGCATACAGGTGACAATGAGGACGTGTCGTTGACTAGTGGCGTCGACGAAGGGGTGTCGTCGCCTGTGAGGGAGGAACAACAGCATTATACACCCAGTCGAGTGGAATCAGACGTCGTCTCAGCAACGACAGGTGTCGATGAGACGACGTGTAGTGATGAGAGTGAGACAAGGCAGTCATCAGCCCGTCGTATGTGTCGAGACTGTCGACGAAGGTTCAGTTAGCAGATATCGTCACTAAAGCGTTGGGGAAGAAGCAATTTGAGTTTTTTTTGAACAAGATGGGCATTCGAGATCTACATGCTCCACCTTGAGGGGATGTTAAGATATTAGATATTATTCTGTGAATATTCTGTAGAGTCCTAAATATGGTATGTTACGTAATATGAGTCCTACATATGGTATGTTACCTAATATGTAATCTAGGGTTTAGGTAATGAGTTGTATTATATATATACGTGTGTTATTAATGAGAAGGATACGAGATTACACAATATTTGACAGATGGTGAACTTATATGATACTAATGAGAAACTTATATTATACTAATGGGAAACTTATAAGTAATGAAATATGTTGTTTTAAAATTTACCTTAAATTGATCTGAATTTTCTTTTATTCTTTGAGGAATAACTTGAACTTTTGATTTTTCTAGGGCTTGTGTTCCCCCAATTTCTGGATCTGGAATATTGTTGGAGCGTGAATTTGCCTTCGCTATTGCAGCAACCCATGTGTTAGGGTTTCACCATTAAAGTATTAAATCGAATTTCTCTCTCGTCTCTCATTGTTGAGTGTAGATTCGAAGAGTTTTCTCTCTCCTCTTGATTGTAGATTCGAAGGCTTTCTACCGGCCCTCTTCTCTGTGTTCTTGGATGGTGTCTCCTCTCGCGTTTCTTTCTCTTGATCCGTTGTTTACGTTTGAGTAGACCTGATCAAATTGCGGGCCGGGCCGGGTTCGGGTCGGGCTTGAGCGTAAAAAGCAGCCCATAATGTTGGGCCGGGTCAAGATTTTGTGCCCAAACCCGTTATTTTCGGGCCGGGCCAACTTTATAACTAAAAAGTGTATTTTTGTGTTTCTTAAA ATGGTGTACCCTTCAAAGTTGGAGTTCAGTGAGAATCTCAATCTCTCTGTTGCTTCCTTGATTAAGTCGTCAATTTCACTGATCCCATGTGGTATTTCTCCCAAGTGTACCAATCTCTCAATCTTACTTTTGAAACACAACCCTCTCGAGGTAATCCCAGAATCATTTTTCTTGCACATGCGTTGCCTTCGTGTTCTGAATCTATCTGATACTCGTATTACTAGACTTCCCAGTACTATTGAGGCTTTAGAAGAGCTTCAAGTCCTAGATCTTAGCAGTTGTCAGAAACTGAAACAAGTGCCCCCACTGTCAAAACTTGTTAAACTAAAGTTCTTGGACCTCTCTGAAACTGCAGTTGAGCAGGTTCCTCGCTGTCTTGAAATGTTAGAAAGGCTCACAGAGCTCAACCTATCATCTATACCTGAACCAAAACAGTTTCCTAAGGGGTTCTTGTCTACCCTATACAGCTTAAAGAGTCTGTCTTGTCATGTTGAAGGCATAATTCATGAGCTTCAACATCTGAAATCATTGGACATTCTTGATGCTACATTTGACAATCTTTCTGACCTGAGTATTTACGTAAGGTCACAGCATTGGCGCACATTAGAGTGCTTCCATTTACAGGTTGGTAAACAAATAACACCGAGGAAATCATACAGCAGAGGAGTATCCCTTCATGGCTGTATCTTGAATGAAAAAACTCTGCTAATACCAGATGACATTCGAGAGCTTTATGTTGATGATTGCAGGGGTTTCTGCAGCCTATCTGATATCCTGTGTCACAACAATGTTTCAACCCTAGAAATATGCAGCATTAGTAGATGCCAAGATGTTGAGAAACTTCTTACACGAGGTTGTATACAGAATCTACAGTACCTTGAATCATTAAAGGTTGAAGAATGTCCACAGTTAAAAGACTTAATAGTAGAGGAGGAGGTTGGCAAACCTGCTGTCATTGATCTCCCACAACTGAAGGAGCTAGTTCTCACCTCGTTACCTCAACTGAATAACATCTATGAGGGTCGACTAGTTTGTACTTCTCTTCGGTTATTTACAGTAATGGACTGTCTAAACCTGAAGCGCCTTCCATTCTCCTATACCAAAGATGGCTTGTGTTCCCCCAATTTCTGGATCTGGAATATTGTTGGAGCGTGAATTTGCCTTCGCTATTGCAGCAACCCATGTGTTAGGGTTTCACCATTAAAGTATTAAATCGAATTTCTCTCTCGTCTCTCATTGTTGAGTGTAGATTCGAAGAGTTTTCTCTCTCCTCTTGATTGTAGATTCGAAGGCTTTCTACCGGCCCTCTTCTCTGTGTTCTTGGATGGTGTCTCCTCTCGCGTTTCTTTCTCTTGATCCGTTGTTTACGTTTGAGTAGACCTGATCAAATTGCGGGCCGGGCCGGGTTCGGGTCGGGCTTGAGCGTAAAAAGCAGCCCATAATGTTGGGCCGGGTCAAGATTTTGTGCCCAAACCCGTTATTTTCGGGCCGGGCCAACTTTATAACTAAAAAGTGTATTTTTGTGTTTCTTAAA ATGGTGTACCCTTCAAAGTTGGAGTTCAGTGAGAATCTCAATCTCTCTGTTGCTTCCTTGATTAAGTCGTCAATTTCACTGATCCCATGTGGTATTTCTCCCAAGTGTACCAATCTCTCAATCTTACTTTTGAAACACAACCCTCTCGAGGTAATCCCAGAATCATTTTTCTTGCACATGCGTTGCCTTCGTGTTCTGAATCTATCTGATACTCGTATTACTAGACTTCCCAGTACTATTGAGGCTTTAGAAGAGCTTCAAGTCCTAGATCTTAGCAGTTGTCAGAAACTGAAACAAGTGCCCCCACTGTCAAAACTTGTTAAACTAAAGTTCTTGGACCTCTCTGAAACTGCAGTTGAGCAGGTTCCTCGCTGTCTTGAAATGTTAGAAAGGCTCACAGAGCTCAACCTATCATCTATACCTGAACCAAAACAGTTTCCTAAGGGGTTCTTGTCTACCCTATACAGCTTAAAGAGTCTGTCTTGTCATGTTGAAGGCATAATTCATGAGCTTCAACATCTGAAATCATTGGACATTCTTGATGCTACATTTGACAATCTTTCTGACCTGAGTATTTACGTAAGGTCACAGCATTGGCGCACATTAGAGTGCTTCCATTTACAGGTTGGTAAACAAATAACACCGAGGAAATCATACAGCAGAGGAGTATCCCTTCATGGCTGTATCTTGAATGAAAAAACTCTGCTAATACCAGATGACATTCGAGAGCTTTATGTTGATGATTGCAGGGGTTTCTGCAGCCTATCTGATATCCTGTGTCACAACAATGTTTCAACCCTAGAAATATGCAGCATTAGTAGATGCCAAGATGTTGAGAAACTTCTTACACGAGGTTGTATACAGAATCTACAGTACCTTGAATCATTAAAGGTTGAAGAATGTCCACAGTTAAAAGACTTAATAGTAGAGGAGGAGGTTGGCAAACCTGCTGTCATTGATCTCCCACAACTGAAGGAGCTAGTTCTCACCTCGTTACCTCAACTGAATAACATCTATGAGGGTCGACTAGTTTGTACTTCTCTTCGGTTATTTACAGTAATGGACTGTCTAAACCTGAAGCGCCTTCCATTCTCCTATACCAAAGATGGCTTGTGTTCCCCCAATTTCTGGATCTGGAATATTGTTGGAGCGTGA MVYPSKLEFSENLNLSVASLIKSSISLIPCGISPKCTNLSILLLKHNPLEVIPESFFLHMRCLRVLNLSDTRITRLPSTIEALEELQVLDLSSCQKLKQVPPLSKLVKLKFLDLSETAVEQVPRCLEMLERLTELNLSSIPEPKQFPKGFLSTLYSLKSLSCHVEGIIHELQHLKSLDILDATFDNLSDLSIYVRSQHWRTLECFHLQVGKQITPRKSYSRGVSLHGCILNEKTLLIPDDIRELYVDDCRGFCSLSDILCHNNVSTLEICSISRCQDVEKLLTRGCIQNLQYLESLKVEECPQLKDLIVEEEVGKPAVIDLPQLKELVLTSLPQLNNIYEGRLVCTSLRLFTVMDCLNLKRLPFSYTKDGLCSPNFWIWNIVGA Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo03939.1 vs. NCBI nr
Match: gi|902220976|gb|KNA18745.1| (hypothetical protein SOVF_067980 [Spinacia oleracea]) HSP 1 Score: 723.0 bits (1865), Expect = 2.700e-205 Identity = 366/369 (99.19%), Postives = 367/369 (99.46%), Query Frame = 1
BLAST of Spo03939.1 vs. NCBI nr
Match: gi|731347793|ref|XP_010685166.1| (PREDICTED: disease resistance protein At4g27190-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 438.3 bits (1126), Expect = 1.300e-119 Identity = 238/380 (62.63%), Postives = 293/380 (77.11%), Query Frame = 1
BLAST of Spo03939.1 vs. NCBI nr
Match: gi|870852805|gb|KMT04686.1| (hypothetical protein BVRB_7g168690 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 438.3 bits (1126), Expect = 1.300e-119 Identity = 238/380 (62.63%), Postives = 293/380 (77.11%), Query Frame = 1
BLAST of Spo03939.1 vs. NCBI nr
Match: gi|731347734|ref|XP_010685138.1| (PREDICTED: disease resistance protein At4g27190-like isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 427.2 bits (1097), Expect = 3.100e-116 Identity = 229/368 (62.23%), Postives = 282/368 (76.63%), Query Frame = 1
BLAST of Spo03939.1 vs. NCBI nr
Match: gi|731347736|ref|XP_010685139.1| (PREDICTED: disease resistance protein At4g27190-like isoform X2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 427.2 bits (1097), Expect = 3.100e-116 Identity = 229/368 (62.23%), Postives = 282/368 (76.63%), Query Frame = 1
BLAST of Spo03939.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RGZ3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_067980 PE=3 SV=1) HSP 1 Score: 723.0 bits (1865), Expect = 1.900e-205 Identity = 366/369 (99.19%), Postives = 367/369 (99.46%), Query Frame = 1
BLAST of Spo03939.1 vs. UniProtKB/TrEMBL
Match: A0A0J8ENW6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g168690 PE=3 SV=1) HSP 1 Score: 438.3 bits (1126), Expect = 9.400e-120 Identity = 238/380 (62.63%), Postives = 293/380 (77.11%), Query Frame = 1
BLAST of Spo03939.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BSZ6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g168480 PE=3 SV=1) HSP 1 Score: 427.2 bits (1097), Expect = 2.200e-116 Identity = 229/368 (62.23%), Postives = 282/368 (76.63%), Query Frame = 1
BLAST of Spo03939.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BB85_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g177740 PE=3 SV=1) HSP 1 Score: 377.9 bits (969), Expect = 1.500e-101 Identity = 217/387 (56.07%), Postives = 267/387 (68.99%), Query Frame = 1
BLAST of Spo03939.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RS45_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_034550 PE=3 SV=1) HSP 1 Score: 374.8 bits (961), Expect = 1.300e-100 Identity = 220/396 (55.56%), Postives = 269/396 (67.93%), Query Frame = 1
BLAST of Spo03939.1 vs. ExPASy Swiss-Prot
Match: RPS2_ARATH (Disease resistance protein RPS2 OS=Arabidopsis thaliana GN=RPS2 PE=1 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 1.000e-18 Identity = 112/390 (28.72%), Postives = 178/390 (45.64%), Query Frame = 1
BLAST of Spo03939.1 vs. ExPASy Swiss-Prot
Match: DRL19_ARATH (Putative disease resistance protein At1g63350 OS=Arabidopsis thaliana GN=At1g63350 PE=3 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 5.300e-15 Identity = 95/355 (26.76%), Postives = 158/355 (44.51%), Query Frame = 1
BLAST of Spo03939.1 vs. ExPASy Swiss-Prot
Match: DRL14_ARATH (Probable disease resistance protein At1g62630 OS=Arabidopsis thaliana GN=At1g62630 PE=3 SV=2) HSP 1 Score: 81.6 bits (200), Expect = 2.000e-14 Identity = 82/293 (27.99%), Postives = 137/293 (46.76%), Query Frame = 1
BLAST of Spo03939.1 vs. ExPASy Swiss-Prot
Match: DRL28_ARATH (Probable disease resistance protein At4g27220 OS=Arabidopsis thaliana GN=At4g27220 PE=2 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 7.600e-14 Identity = 49/142 (34.51%), Postives = 80/142 (56.34%), Query Frame = 1
BLAST of Spo03939.1 vs. ExPASy Swiss-Prot
Match: DRL27_ARATH (Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 3.800e-13 Identity = 100/387 (25.84%), Postives = 167/387 (43.15%), Query Frame = 1
BLAST of Spo03939.1 vs. TAIR (Arabidopsis)
Match: AT4G26090.1 (NB-ARC domain-containing disease resistance protein) HSP 1 Score: 95.9 bits (237), Expect = 5.800e-20 Identity = 112/390 (28.72%), Postives = 178/390 (45.64%), Query Frame = 1
BLAST of Spo03939.1 vs. TAIR (Arabidopsis)
Match: AT1G63350.1 (Disease resistance protein (CC-NBS-LRR class) family) HSP 1 Score: 83.6 bits (205), Expect = 3.000e-16 Identity = 95/355 (26.76%), Postives = 158/355 (44.51%), Query Frame = 1
BLAST of Spo03939.1 vs. TAIR (Arabidopsis)
Match: AT1G62630.1 (Disease resistance protein (CC-NBS-LRR class) family) HSP 1 Score: 81.6 bits (200), Expect = 1.100e-15 Identity = 82/293 (27.99%), Postives = 137/293 (46.76%), Query Frame = 1
BLAST of Spo03939.1 vs. TAIR (Arabidopsis)
Match: AT4G27220.1 (NB-ARC domain-containing disease resistance protein) HSP 1 Score: 79.7 bits (195), Expect = 4.300e-15 Identity = 49/142 (34.51%), Postives = 80/142 (56.34%), Query Frame = 1
BLAST of Spo03939.1 vs. TAIR (Arabidopsis)
Match: AT4G27190.1 (NB-ARC domain-containing disease resistance protein) HSP 1 Score: 77.4 bits (189), Expect = 2.100e-14 Identity = 100/387 (25.84%), Postives = 167/387 (43.15%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo03939.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo03939.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo03939.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo03939.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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