Spo03979 (gene) | SpinachBase

Overview


Name	Spo03979
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	60S ribosomal protein
Location	chr1 : 47081832 .. 47084695 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCATCTTCCTCCGTCGTATCTTCCTCCGTCGTATCTTCCTCCGTCGTATCTTCCTCCTTCCTCTATGTCGTGTTTTGGTTTTAAACCTCTGGTTGGGATCGGGATCTAAGGTTTAAAGCTTTAAATTTAGCGGTATCTAGGGTTTTACATTAACTCCTTTTAAACCAATGCAGGCGCCAGAGAAGAAGTTGTCGAACCCAATGAGGGACATCAAGGTCCAAAAGCTTGTTCTCAACATCTCTGTTGGCGAGAGTGGTGATCGTCTTACCAGAGCTGCAAAGGTATAATTTCTTAAATGATTTCTTTTTCTGTATGTTTGATCTTAATGTGTCGCAAATTTTAATCCGGTATTTAAATCTTGGGTTTTTATTTTTTTAATTCATTAGGTGTTGGAGCAACTCAGTGGCCAAACCCCTGTTTACTCCAAAGGTACATCTACAAATAATTGCTCGAAATTGAATGGTTTAGTTTTCCTTATTGGAAAAATTGTTCAAGTGAAATGAATGTTGTTTGAGTGTTTAAATTGCGTTTATGTATATTCTGGTTTTTGGTATCGAGTTTTGTGTATGGCTTGGTGAATTTATATGATACTGATTCTATGTCTTATGATGATTTAACGGAGTTCTTATTTGTTAACTTTATAAATTTTTATGAAAGCCCTGGTATGGTGTTCCCAGTTTTGCTAAAGATAAGAACGGATTATTGGAGTTTGCCGTTTTCTAATTTATATATAAATGAAGGTTAACATTAGTAGTGCAGACATATATTCATATCGTGTTGCATGAATTAAGTCTTTGATGAAGAATTATTATGATACGTGCTTGCTGGGCTGATAAAAAGAATGTGATGGAATGTTTTACTTGAGTAATGCAGATGCCTTGAAATATCTTTTTGCTGTTGTTATTTATAGGCTAACATATGATGTTGGATTAAAGCAAGAAATGTAATCTTTTTTATTTTGGTAATGATGTTTCATTTGGGTGGTTTGTTGCTGTTCATAATGTGTTTGGTTAATTGTTTAATGGAAGAATGTGTATCATTTGTGAAGAAGTCTTGTTTGGTTTGCTTATGATGAACAGCAAGGTACACTGTCCGATCCTTTGGAATCAGGCGTAATGAGAAGATTGCTTGTCACGTGACTGTTAGAGGTGACAAGGCAATGCAGCTACTTGAAAGTGGTTTGAAGGTCAAGGAATACGAGTTGCTCAGGAGGAACTTCAGTGAGACTGGATGCTTCGGCTTTGGTATCCAAGAGCACATTGATCTTGGGATCAAGTGAGCTTTCTTGCTTATTTAACTTTCTGATTCTCTGTTTGTAGAATCTGTTTTTTGCTGGTTGTTTTATAAGCTTATTATCTAGAGGTGTATGCTATTCATAAGCTTGTAATTGTCTCCCTAAACCGTAGCCTTGTTTGTTAGATTATGCTTTATACAGCCAAGATTGTATGCTTTAGATTGTGCTGCCATTTTAGAGTATGCTTTATATTCTAAACAACAAATGCAGCTTTATACAACAAGATTATGCAATGTTGCATTTGTTGTTTAGAGTGTAGTTATTACTTAAAGCTTTAGGTAAAGTATCCTTCCACTGTTCCATTTTGGCAGTATGAAGTTTTTTTCAGTTGATCACTTATTCACTTGTTAATCTTGTTGTGCCTATTGTTTTGTTTCATATCTCATTCTGTGACTTGAGTTGATTAGGCAAGTCAGTTATAGTTCTTTAATCTGTTTTTTTTCCTTTTTCAAGGTATGATCCTTCTACTGGTATTTATGGTATGGACTTCTACGTCGTGCTTGAGCGCCCTGGTTACCGTGTTGCCCGTCGCAGAAGGTGCAAGGCCCGTGTTGGAATTCAGCACAGAGTGACCAAGGAGGATTCAATGAAGTGGTTCCAGGTCAAATATGAAGGAGTTATCCTCAACAAGGCCCACAACACCGGTTCTTAACTTCTGTTCGAATTTATCCTAAACTTCTGTTCCATCTTTTAGCCTTTCCCCATTAGGGTTAAGTCGAATTACTAGTAAAAAGGAGTTTTTACCATTTTTGTAGTTTTCTTTGTACTGCTGGATCGTAGTGGTTCAAGAATTTTGTTCTCTGATGCATCGCGTTCCTTGTACAGTTGTCATTACCATGAATGCTCCATCGTGCTTTTATTTGACATCAATCGTGTTCTGTAGTTAAAGATGGCCGTGGGCTGGGCTGGGCTTTGTGCTGAGCCCACGTGCTGTGGGCCTGAACGGGCAGGGCCCAAGACAGGCTGACTCACCTTCGTGCCTGGTTGGGCCGGTTGAAAAGTTCAAAACATGTCCCAGGCCCATGGGCTTTTTGCTGGGCCGGGTCGAGCCACAGTGGCTAAGCATAGTTTTACTGAATTTAGTGTGCTGTGTCTTGTGCTTTTTCCAAAAAAATTGGCCCCGGCCTGGCCCATGACCTCGTGCTTGTGCTGTGCTTTTTTTGTACCTGTGTCGGGTTGGGCTTTTTTCGTGCTTGGTCGCGCCTTGTCCTGGCCCACAGCCAAATATCTGCTTTCCTTAATTCTGAGATTGATTTGTGGGGATGTGAAGAGGTTAATTAAATATTGGAGAGGCATTTCATTTGGTTGTACCGGTGGTTTTATGTTTGTTTGGGGAAAAGATGTTGTGCTGGGTTTTGTTTTCCAGTGCAGACAGTGGCAAGTAGTTTTACAGTGTAATTTGTCAAGGGTAAACACATGGTTGACTTTTGAGTACTCCATTCAAGAATGGCTGAATGGGAAGTTTCTGTTAGAGTTGGCTGCTTTTGGTTTGGGATTTTGTTTTCGCTCTTTCGTATGGTGTAAAAGGAACTAATAATCGAGAACGGATGGAGTAGTTAATTACGACCAA

mRNA sequence

TCATCTTCCTCCGTCGTATCTTCCTCCGTCGTATCTTCCTCCGTCGTATCTTCCTCCTTCCTCTATGTCGTGTTTTGGTTTTAAACCTCTGGTTGGGATCGGGATCTAAGGTTTAAAGCTTTAAATTTAGCGGTATCTAGGGTTTTACATTAACTCCTTTTAAACCAATGCAGGCGCCAGAGAAGAAGTTGTCGAACCCAATGAGGGACATCAAGGTCCAAAAGCTTGTTCTCAACATCTCTGTTGGCGAGAGTGGTGATCGTCTTACCAGAGCTGCAAAGGTGTTGGAGCAACTCAGTGGCCAAACCCCTGTTTACTCCAAAGCAAGGTACACTGTCCGATCCTTTGGAATCAGGCGTAATGAGAAGATTGCTTGTCACGTGACTGTTAGAGGTGACAAGGCAATGCAGCTACTTGAAAGTGGTTTGAAGGTCAAGGAATACGAGTTGCTCAGGAGGAACTTCAGTGAGACTGGATGCTTCGGCTTTGGTATCCAAGAGCACATTGATCTTGGGATCAAGTATGATCCTTCTACTGGTATTTATGGTATGGACTTCTACGTCGTGCTTGAGCGCCCTGGTTACCGTGTTGCCCGTCGCAGAAGGTGCAAGGCCCGTGTTGGAATTCAGCACAGAGTGACCAAGGAGGATTCAATGAAGTGGTTCCAGGTCAAATATGAAGGAGTTATCCTCAACAAGGCCCACAACACCGGTTCTTAACTTCTGTTCGAATTTATCCTAAACTTCTGTTCCATCTTTTAGCCTTTCCCCATTAGGGTTAAGTCGAATTACTAGTAAAAAGGAGTTTTTACCATTTTTGTAGTTTTCTTTGTACTGCTGGATCGTAGTGGTTCAAGAATTTTGTTCTCTGATGCATCGCGTTCCTTGTACAGTTGTCATTACCATGAATGCTCCATCGTGCTTTTATTTGACATCAATCGTGTTCTGTAGTTAAAGATGGCCGTGGGCTGGGCTGGGCTTTGTGCTGAGCCCACGTGCTGTGGGCCTGAACGGGCAGGGCCCAAGACAGGCTGACTCACCTTCGTGCCTGGTTGGGCCGGTTGAAAAGTTCAAAACATGTCCCAGGCCCATGGGCTTTTTGCTGGGCCGGGTCGAGCCACAGTGGCTAAGCATAGTTTTACTGAATTTAGTGTGCTGTGTCTTGTGCTTTTTCCAAAAAAATTGGCCCCGGCCTGGCCCATGACCTCGTGCTTGTGCTGTGCTTTTTTTGTACCTGTGTCGGGTTGGGCTTTTTTCGTGCTTGGTCGCGCCTTGTCCTGGCCCACAGCCAAATATCTGCTTTCCTTAATTCTGAGATTGATTTGTGGGGATGTGAAGAGGTTAATTAAATATTGGAGAGGCATTTCATTTGGTTGTACCGGTGGTTTTATGTTTGTTTGGGGAAAAGATGTTGTGCTGGGTTTTGTTTTCCAGTGCAGACAGTGGCAAGTAGTTTTACAGTGTAATTTGTCAAGGGTAAACACATGGTTGACTTTTGAGTACTCCATTCAAGAATGGCTGAATGGGAAGTTTCTGTTAGAGTTGGCTGCTTTTGGTTTGGGATTTTGTTTTCGCTCTTTCGTATGGTGTAAAAGGAACTAATAATCGAGAACGGATGGAGTAGTTAATTACGACCAA

Coding sequence (CDS)

ATGCAGGCGCCAGAGAAGAAGTTGTCGAACCCAATGAGGGACATCAAGGTCCAAAAGCTTGTTCTCAACATCTCTGTTGGCGAGAGTGGTGATCGTCTTACCAGAGCTGCAAAGGTGTTGGAGCAACTCAGTGGCCAAACCCCTGTTTACTCCAAAGCAAGGTACACTGTCCGATCCTTTGGAATCAGGCGTAATGAGAAGATTGCTTGTCACGTGACTGTTAGAGGTGACAAGGCAATGCAGCTACTTGAAAGTGGTTTGAAGGTCAAGGAATACGAGTTGCTCAGGAGGAACTTCAGTGAGACTGGATGCTTCGGCTTTGGTATCCAAGAGCACATTGATCTTGGGATCAAGTATGATCCTTCTACTGGTATTTATGGTATGGACTTCTACGTCGTGCTTGAGCGCCCTGGTTACCGTGTTGCCCGTCGCAGAAGGTGCAAGGCCCGTGTTGGAATTCAGCACAGAGTGACCAAGGAGGATTCAATGAAGTGGTTCCAGGTCAAATATGAAGGAGTTATCCTCAACAAGGCCCACAACACCGGTTCTTAA

Protein sequence

MQAPEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGIRRNEKIACHVTVRGDKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKEDSMKWFQVKYEGVILNKAHNTGS

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo03979.1	Spo03979.1	mRNA

Homology

[Close]

BLAST of Spo03979.1 vs. NCBI nr
Match: gi|902166929|gb|KNA07295.1| (hypothetical protein SOVF_173280 [Spinacia oleracea])

HSP 1 Score: 367.5 bits (942), Expect = 1.400e-98
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 1

		  
Query: 3   APEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGI 62
           APEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGI
Sbjct: 2   APEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGI 61

Query: 63  RRNEKIACHVTVRGDKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPS 122
           RRNEKIACHVTVRGDKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPS
Sbjct: 62  RRNEKIACHVTVRGDKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPS 121

Query: 123 TGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKEDSMKWFQVKYEGVILNKAHNTG 182
           TGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKEDSMKWFQVKYEGVILNKAHNTG
Sbjct: 122 TGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKEDSMKWFQVKYEGVILNKAHNTG 181

Query: 183 S 184
           S
Sbjct: 182 S 182

[Close]

BLAST of Spo03979.1 vs. NCBI nr
Match: gi|902163586|gb|KNA06849.1| (hypothetical protein SOVF_177260 [Spinacia oleracea])

HSP 1 Score: 365.9 bits (938), Expect = 4.000e-98
Identity = 180/181 (99.45%), Postives = 181/181 (100.00%), Query Frame = 1

		  
Query: 3   APEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGI 62
           APEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGI
Sbjct: 2   APEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGI 61

Query: 63  RRNEKIACHVTVRGDKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPS 122
           RRNEKIACHVTVRG+KAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPS
Sbjct: 62  RRNEKIACHVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPS 121

Query: 123 TGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKEDSMKWFQVKYEGVILNKAHNTG 182
           TGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKEDSMKWFQVKYEGVILNKAHNTG
Sbjct: 122 TGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKEDSMKWFQVKYEGVILNKAHNTG 181

Query: 183 S 184
           S
Sbjct: 182 S 182

[Close]

BLAST of Spo03979.1 vs. NCBI nr
Match: gi|731356564|ref|XP_010689741.1| (PREDICTED: 60S ribosomal protein L11-1 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 361.3 bits (926), Expect = 9.900e-97
Identity = 177/183 (96.72%), Postives = 182/183 (99.45%), Query Frame = 1

		  
Query: 1   MQAPEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSF 60
           MQAPEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSF
Sbjct: 1   MQAPEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSF 60

Query: 61  GIRRNEKIACHVTVRGDKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYD 120
           GIRRNEKIAC+VTVRG+KAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLGIKYD
Sbjct: 61  GIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYD 120

Query: 121 PSTGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKEDSMKWFQVKYEGVILNKAHN 180
           PSTGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTK+D+MKWFQVKYEGVILNKAHN
Sbjct: 121 PSTGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKAHN 180

Query: 181 TGS 184
            GS
Sbjct: 181 IGS 183

[Close]

BLAST of Spo03979.1 vs. NCBI nr
Match: gi|731356566|ref|XP_010689742.1| (PREDICTED: 60S ribosomal protein L11-1 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 357.8 bits (917), Expect = 1.100e-95
Identity = 175/181 (96.69%), Postives = 180/181 (99.45%), Query Frame = 1

		  
Query: 3   APEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGI 62
           APEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGI
Sbjct: 2   APEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGI 61

Query: 63  RRNEKIACHVTVRGDKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPS 122
           RRNEKIAC+VTVRG+KAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLGIKYDPS
Sbjct: 62  RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 121

Query: 123 TGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKEDSMKWFQVKYEGVILNKAHNTG 182
           TGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTK+D+MKWFQVKYEGVILNKAHN G
Sbjct: 122 TGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKAHNIG 181

Query: 183 S 184
           S
Sbjct: 182 S 182

[Close]

BLAST of Spo03979.1 vs. NCBI nr
Match: gi|604341894|gb|EYU41113.1| (hypothetical protein MIMGU_mgv1a014638mg [Erythranthe guttata])

HSP 1 Score: 349.7 bits (896), Expect = 3.000e-93
Identity = 172/183 (93.99%), Postives = 179/183 (97.81%), Query Frame = 1

		  
Query: 1   MQAPEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSF 60
           M+A EKKLSNPMR+IKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPV+SKARYTVRSF
Sbjct: 1   MKASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSF 60

Query: 61  GIRRNEKIACHVTVRGDKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYD 120
           GIRRNEKIAC+VTVRGDKAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLGIKYD
Sbjct: 61  GIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYD 120

Query: 121 PSTGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKEDSMKWFQVKYEGVILNKAHN 180
           PSTGIYGMDFYVVLERPGYRV RRRRCK+RVGIQHRVTKEDSMKWFQVKYEGVILNKA N
Sbjct: 121 PSTGIYGMDFYVVLERPGYRVGRRRRCKSRVGIQHRVTKEDSMKWFQVKYEGVILNKATN 180

Query: 181 TGS 184
            G+
Sbjct: 181 IGT 183

[Close]

BLAST of Spo03979.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QJ58_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_054760 PE=3 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 9.700e-99
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 1

		  
Query: 3   APEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGI 62
           APEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGI
Sbjct: 2   APEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGI 61

Query: 63  RRNEKIACHVTVRGDKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPS 122
           RRNEKIACHVTVRGDKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPS
Sbjct: 62  RRNEKIACHVTVRGDKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPS 121

Query: 123 TGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKEDSMKWFQVKYEGVILNKAHNTG 182
           TGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKEDSMKWFQVKYEGVILNKAHNTG
Sbjct: 122 TGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKEDSMKWFQVKYEGVILNKAHNTG 181

Query: 183 S 184
           S
Sbjct: 182 S 182

[Close]

BLAST of Spo03979.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QHV7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_177260 PE=3 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 2.800e-98
Identity = 180/181 (99.45%), Postives = 181/181 (100.00%), Query Frame = 1

		  
Query: 3   APEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGI 62
           APEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGI
Sbjct: 2   APEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGI 61

Query: 63  RRNEKIACHVTVRGDKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPS 122
           RRNEKIACHVTVRG+KAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPS
Sbjct: 62  RRNEKIACHVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPS 121

Query: 123 TGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKEDSMKWFQVKYEGVILNKAHNTG 182
           TGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKEDSMKWFQVKYEGVILNKAHNTG
Sbjct: 122 TGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKEDSMKWFQVKYEGVILNKAHNTG 181

Query: 183 S 184
           S
Sbjct: 182 S 182

[Close]

BLAST of Spo03979.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BKL6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g209130 PE=3 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 7.700e-96
Identity = 175/181 (96.69%), Postives = 180/181 (99.45%), Query Frame = 1

		  
Query: 3   APEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGI 62
           APEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGI
Sbjct: 2   APEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGI 61

Query: 63  RRNEKIACHVTVRGDKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPS 122
           RRNEKIAC+VTVRG+KAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLGIKYDPS
Sbjct: 62  RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 121

Query: 123 TGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKEDSMKWFQVKYEGVILNKAHNTG 182
           TGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTK+D+MKWFQVKYEGVILNKAHN G
Sbjct: 122 TGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKAHNIG 181

Query: 183 S 184
           S
Sbjct: 182 S 182

[Close]

BLAST of Spo03979.1 vs. UniProtKB/TrEMBL
Match: A0A022RMU7_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a014638mg PE=3 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 2.100e-93
Identity = 172/183 (93.99%), Postives = 179/183 (97.81%), Query Frame = 1

		  
Query: 1   MQAPEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSF 60
           M+A EKKLSNPMR+IKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPV+SKARYTVRSF
Sbjct: 1   MKASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSF 60

Query: 61  GIRRNEKIACHVTVRGDKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYD 120
           GIRRNEKIAC+VTVRGDKAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLGIKYD
Sbjct: 61  GIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYD 120

Query: 121 PSTGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKEDSMKWFQVKYEGVILNKAHN 180
           PSTGIYGMDFYVVLERPGYRV RRRRCK+RVGIQHRVTKEDSMKWFQVKYEGVILNKA N
Sbjct: 121 PSTGIYGMDFYVVLERPGYRVGRRRRCKSRVGIQHRVTKEDSMKWFQVKYEGVILNKATN 180

Query: 181 TGS 184
            G+
Sbjct: 181 IGT 183

[Close]

BLAST of Spo03979.1 vs. UniProtKB/TrEMBL
Match: V4MQV7_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10026344mg PE=3 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 3.600e-93
Identity = 171/180 (95.00%), Postives = 178/180 (98.89%), Query Frame = 1

		  
Query: 1   MQAPEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSF 60
           MQA EKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQTPV+SKARYTVRSF
Sbjct: 1   MQASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSF 60

Query: 61  GIRRNEKIACHVTVRGDKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYD 120
           GIRRNEKIAC+VTVRGDKAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLGIKYD
Sbjct: 61  GIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYD 120

Query: 121 PSTGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKEDSMKWFQVKYEGVILNKAHN 180
           PSTGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTK+D+MKWFQVKYEGVILNK+ N
Sbjct: 121 PSTGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQN 180

[Close]

BLAST of Spo03979.1 vs. ExPASy Swiss-Prot
Match: RL111_ARATH (60S ribosomal protein L11-1 OS=Arabidopsis thaliana GN=RPL11A PE=2 SV=2)

HSP 1 Score: 344.0 bits (881), Expect = 1.000e-93
Identity = 168/178 (94.38%), Postives = 176/178 (98.88%), Query Frame = 1

		  
Query: 3   APEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGI 62
           A EKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQTPV+SKARYTVRSFGI
Sbjct: 2   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGI 61

Query: 63  RRNEKIACHVTVRGDKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPS 122
           RRNEKIAC+VTVRG+KAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLGIKYDPS
Sbjct: 62  RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 121

Query: 123 TGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKEDSMKWFQVKYEGVILNKAHN 181
           TGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTK+D+MKWFQVKYEGVILNK+ N
Sbjct: 122 TGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQN 179

[Close]

BLAST of Spo03979.1 vs. ExPASy Swiss-Prot
Match: RL112_ARATH (60S ribosomal protein L11-2 OS=Arabidopsis thaliana GN=RPL11B PE=2 SV=2)

HSP 1 Score: 342.4 bits (877), Expect = 3.000e-93
Identity = 167/178 (93.82%), Postives = 175/178 (98.31%), Query Frame = 1

		  
Query: 3   APEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGI 62
           A EKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQTPV+SKARYTVRSFGI
Sbjct: 2   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGI 61

Query: 63  RRNEKIACHVTVRGDKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPS 122
           RRNEKIAC+VTVRG+KAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLGIKYDPS
Sbjct: 62  RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 121

Query: 123 TGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKEDSMKWFQVKYEGVILNKAHN 181
           TGIYGMDFYVVLERPGYRVARRRRCK RVGIQHRVTK+D+MKWFQVKYEGVILNK+ N
Sbjct: 122 TGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQN 179

[Close]

BLAST of Spo03979.1 vs. ExPASy Swiss-Prot
Match: RL11_MEDSA (60S ribosomal protein L11 OS=Medicago sativa GN=RPL11 PE=2 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 1.900e-92
Identity = 166/176 (94.32%), Postives = 174/176 (98.86%), Query Frame = 1

		  
Query: 3   APEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGI 62
           A EKKLSNPMR+IKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPV+SKARYTVRSFGI
Sbjct: 2   ASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGI 61

Query: 63  RRNEKIACHVTVRGDKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPS 122
           RRNEKIAC+VTVRGDKAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLGIKYDPS
Sbjct: 62  RRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 121

Query: 123 TGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKEDSMKWFQVKYEGVILNKA 179
           TGIYGMDF+VVLERPGYRV RRRRCKARVGIQHRVTK+D+MKWFQVKYEGVILNK+
Sbjct: 122 TGIYGMDFFVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKS 177

[Close]

BLAST of Spo03979.1 vs. ExPASy Swiss-Prot
Match: RL11_ORYSJ (60S ribosomal protein L11 OS=Oryza sativa subsp. japonica GN=RPL11 PE=2 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 3.700e-91
Identity = 165/176 (93.75%), Postives = 173/176 (98.30%), Query Frame = 1

		  
Query: 3   APEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGI 62
           A EKK SNPMR+IKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PV+SKARYTVRSFGI
Sbjct: 2   ASEKKQSNPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFGI 61

Query: 63  RRNEKIACHVTVRGDKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPS 122
           RRNEKIAC+VTVRG+KAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPS
Sbjct: 62  RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPS 121

Query: 123 TGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKEDSMKWFQVKYEGVILNKA 179
           TGIYGMDFYVVLER GYRVARRRRCK+RVGIQHRVTKED+MKWFQVKYEGVILNKA
Sbjct: 122 TGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKA 177

[Close]

BLAST of Spo03979.1 vs. ExPASy Swiss-Prot
Match: RL11_ORYSI (60S ribosomal protein L11 OS=Oryza sativa subsp. indica GN=RPL11 PE=2 SV=2)

HSP 1 Score: 335.5 bits (859), Expect = 3.700e-91
Identity = 165/176 (93.75%), Postives = 173/176 (98.30%), Query Frame = 1

		  
Query: 3   APEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGI 62
           A EKK SNPMR+IKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PV+SKARYTVRSFGI
Sbjct: 2   ASEKKQSNPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFGI 61

Query: 63  RRNEKIACHVTVRGDKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPS 122
           RRNEKIAC+VTVRG+KAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPS
Sbjct: 62  RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPS 121

Query: 123 TGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKEDSMKWFQVKYEGVILNKA 179
           TGIYGMDFYVVLER GYRVARRRRCK+RVGIQHRVTKED+MKWFQVKYEGVILNKA
Sbjct: 122 TGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKA 177

[Close]

BLAST of Spo03979.1 vs. TAIR (Arabidopsis)
Match: AT2G42740.1 (ribosomal protein large subunit 16A)

HSP 1 Score: 344.0 bits (881), Expect = 5.800e-95
Identity = 168/178 (94.38%), Postives = 176/178 (98.88%), Query Frame = 1

		  
Query: 3   APEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGI 62
           A EKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQTPV+SKARYTVRSFGI
Sbjct: 2   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGI 61

Query: 63  RRNEKIACHVTVRGDKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPS 122
           RRNEKIAC+VTVRG+KAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLGIKYDPS
Sbjct: 62  RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 121

Query: 123 TGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKEDSMKWFQVKYEGVILNKAHN 181
           TGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTK+D+MKWFQVKYEGVILNK+ N
Sbjct: 122 TGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQN 179

[Close]

BLAST of Spo03979.1 vs. TAIR (Arabidopsis)
Match: AT3G58700.1 (Ribosomal L5P family protein)

HSP 1 Score: 342.4 bits (877), Expect = 1.700e-94
Identity = 167/178 (93.82%), Postives = 175/178 (98.31%), Query Frame = 1

		  
Query: 3   APEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGI 62
           A EKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQTPV+SKARYTVRSFGI
Sbjct: 2   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGI 61

Query: 63  RRNEKIACHVTVRGDKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPS 122
           RRNEKIAC+VTVRG+KAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLGIKYDPS
Sbjct: 62  RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 121

Query: 123 TGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKEDSMKWFQVKYEGVILNKAHN 181
           TGIYGMDFYVVLERPGYRVARRRRCK RVGIQHRVTK+D+MKWFQVKYEGVILNK+ N
Sbjct: 122 TGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQN 179

[Close]

BLAST of Spo03979.1 vs. TAIR (Arabidopsis)
Match: AT4G18730.1 (ribosomal protein L16B)

HSP 1 Score: 342.4 bits (877), Expect = 1.700e-94
Identity = 167/178 (93.82%), Postives = 175/178 (98.31%), Query Frame = 1

		  
Query: 3   APEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGI 62
           A EKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQTPV+SKARYTVRSFGI
Sbjct: 2   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGI 61

Query: 63  RRNEKIACHVTVRGDKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPS 122
           RRNEKIAC+VTVRG+KAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLGIKYDPS
Sbjct: 62  RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 121

Query: 123 TGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKEDSMKWFQVKYEGVILNKAHN 181
           TGIYGMDFYVVLERPGYRVARRRRCK RVGIQHRVTK+D+MKWFQVKYEGVILNK+ N
Sbjct: 122 TGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQN 179

[Close]

BLAST of Spo03979.1 vs. TAIR (Arabidopsis)
Match: AT5G45775.2 (Ribosomal L5P family protein)

HSP 1 Score: 342.4 bits (877), Expect = 1.700e-94
Identity = 167/178 (93.82%), Postives = 175/178 (98.31%), Query Frame = 1

		  
Query: 3   APEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGI 62
           A EKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQTPV+SKARYTVRSFGI
Sbjct: 2   ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGI 61

Query: 63  RRNEKIACHVTVRGDKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPS 122
           RRNEKIAC+VTVRG+KAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLGIKYDPS
Sbjct: 62  RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 121

Query: 123 TGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKEDSMKWFQVKYEGVILNKAHN 181
           TGIYGMDFYVVLERPGYRVARRRRCK RVGIQHRVTK+D+MKWFQVKYEGVILNK+ N
Sbjct: 122 TGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQN 179

[Close]

BLAST of Spo03979.1 vs. TAIR (Arabidopsis)
Match: AT4G01310.1 (Ribosomal L5P family protein)

HSP 1 Score: 52.0 bits (123), Expect = 4.600e-7
Identity = 32/124 (25.81%), Postives = 66/124 (53.23%), Query Frame = 1

		  
Query: 16  KVQKLVLNISVGESGDR---LTRAAKVLEQLSGQTPVYSKARYTVRSFGIRRNEKIACHV 75
           KVQK+V+N  +G++      L  A K +  ++GQ P+ ++AR ++ +F IR ++ +   V
Sbjct: 85  KVQKIVVNCGIGDAAQNDKGLEAAMKDIALITGQKPIKTRARASIATFKIREDQPLGIAV 144

Query: 76  TVRGDKAMQLLESGL-----KVKEYE-LLRRNFSETGCFGFGIQEH-IDLGIKYDPSTGI 130
           T+RGD     L+  +     + ++++ +   +F   G +  G+++  +   I++D     
Sbjct: 145 TLRGDVMYSFLDRLINLALPRTRDFQGVSPSSFDGNGNYSIGVKDQGVFPEIRFDAVGKT 204

The following BLAST results are available for this feature:

BLAST of Spo03979.1 vs. NCBI nr
BLAST of Spo03979.1 vs. UniProtKB/TrEMBL
BLAST of Spo03979.1 vs. ExPASy Swiss-Prot
BLAST of Spo03979.1 vs. TAIR (Arabidopsis)

BLAST of Spo03979.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|902166929\|gb\|KNA07295.1\|	1.4e-98	100.	hypothetical protein SOVF_1732...	[more]
gi\|902163586\|gb\|KNA06849.1\|	4.0e-98	99.4	hypothetical protein SOVF_1772...	[more]
gi\|731356564\|ref\|XP_010689741.1\|	9.9e-97	96.7	PREDICTED: 60S ribosomal prote...	[more]
gi\|731356566\|ref\|XP_010689742.1\|	1.1e-95	96.6	PREDICTED: 60S ribosomal prote...	[more]
gi\|604341894\|gb\|EYU41113.1\|	3.0e-93	93.9	hypothetical protein MIMGU_mgv...	[more]

BLAST of Spo03979.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0K9QJ58_SPIOL	9.7e-99	100.	Uncharacterized protein OS=Spi...	[more]
A0A0K9QHV7_SPIOL	2.8e-98	99.4	Uncharacterized protein OS=Spi...	[more]
A0A0J8BKL6_BETVU	7.7e-96	96.6	Uncharacterized protein OS=Bet...	[more]
A0A022RMU7_ERYGU	2.1e-93	93.9	Uncharacterized protein OS=Ery...	[more]
V4MQV7_EUTSA	3.6e-93	95.0	Uncharacterized protein OS=Eut...	[more]

BLAST of Spo03979.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
RL111_ARATH	1.0e-93	94.3	60S ribosomal protein L11-1 OS...	[more]
RL112_ARATH	3.0e-93	93.8	60S ribosomal protein L11-2 OS...	[more]
RL11_MEDSA	1.9e-92	94.3	60S ribosomal protein L11 OS=M...	[more]
RL11_ORYSJ	3.7e-91	93.7	60S ribosomal protein L11 OS=O...	[more]
RL11_ORYSI	3.7e-91	93.7	60S ribosomal protein L11 OS=O...	[more]

BLAST of Spo03979.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
AT2G42740.1	5.8e-95	94.3	ribosomal protein large subuni...	[more]
AT3G58700.1	1.7e-94	93.8	Ribosomal L5P family protein	[more]
AT4G18730.1	1.7e-94	93.8	ribosomal protein L16B	[more]
AT5G45775.2	1.7e-94	93.8	Ribosomal L5P family protein	[more]
AT4G01310.1	4.6e-7	25.8	Ribosomal L5P family protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002132	Ribosomal protein L5	PIR	PIRSF002161	RPL5p_RPL5a_RPL11e_RPL5o	coord: 1..173 score: 4.5
IPR020929	Ribosomal protein L5, conserved site	PROSITE	PS00358	RIBOSOMAL_L5	coord: 40..56 scor
IPR022803	Ribosomal protein L5 domain	GENE3D	3.30.1440.10		coord: 5..176 score: 2.1
IPR022803	Ribosomal protein L5 domain	unknown	SSF55282	RL5-like	coord: 9..174 score: 7.77
None	No IPR available	PANTHER	PTHR11994	60S RIBOSOMAL PROTEIN L11-RELATED	coord: 3..179 score: 8.9E
None	No IPR available	PANTHER	PTHR11994:SF13	SUBFAMILY NOT NAMED	coord: 3..179 score: 8.9E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0034968	histone lysine methylation
biological_process	GO:0042545	cell wall modification
biological_process	GO:0006606	protein import into nucleus
biological_process	GO:0006397	mRNA processing
biological_process	GO:0009553	embryo sac development
biological_process	GO:0048608	reproductive structure development
biological_process	GO:0022414	reproductive process
biological_process	GO:0009791	post-embryonic development
biological_process	GO:0031047	gene silencing by RNA
biological_process	GO:0006446	regulation of translational initiation
biological_process	GO:0032776	DNA methylation on cytosine
biological_process	GO:0006261	DNA-dependent DNA replication
biological_process	GO:0006412	translation
biological_process	GO:0007049	cell cycle
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0006364	rRNA processing
biological_process	GO:0009664	plant-type cell wall organization
biological_process	GO:0050790	regulation of catalytic activity
biological_process	GO:0001510	RNA methylation
biological_process	GO:0009561	megagametogenesis
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0006448	regulation of translational elongation
biological_process	GO:0009099	valine biosynthetic process
biological_process	GO:0006090	pyruvate metabolic process
biological_process	GO:0009098	leucine biosynthetic process
biological_process	GO:0071702	organic substance transport
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0033036	macromolecule localization
biological_process	GO:0042176	regulation of protein catabolic process
biological_process	GO:0009987	cellular process
biological_process	GO:0010498	proteasomal protein catabolic process
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0009263	deoxyribonucleotide biosynthetic process
biological_process	GO:0009202	deoxyribonucleoside triphosphate biosynthetic process
biological_process	GO:0009186	deoxyribonucleoside diphosphate metabolic process
biological_process	GO:0007010	cytoskeleton organization
biological_process	GO:0006396	RNA processing
biological_process	GO:0006342	chromatin silencing
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0006414	translational elongation
biological_process	GO:0009409	response to cold
biological_process	GO:0009097	isoleucine biosynthetic process
biological_process	GO:0006563	L-serine metabolic process
biological_process	GO:0009089	lysine biosynthetic process via diaminopimelate
biological_process	GO:0009086	methionine biosynthetic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006164	purine nucleotide biosynthetic process
biological_process	GO:0009088	threonine biosynthetic process
biological_process	GO:0006544	glycine metabolic process
biological_process	GO:0000373	Group II intron splicing
biological_process	GO:0006228	UTP biosynthetic process
biological_process	GO:0006165	nucleoside diphosphate phosphorylation
biological_process	GO:0006183	GTP biosynthetic process
biological_process	GO:0006241	CTP biosynthetic process
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0009585	red, far-red light phototransduction
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005971	ribonucleoside-diphosphate reductase complex
cellular_component	GO:0005622	intracellular
cellular_component	GO:0000502	proteasome complex
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005618	cell wall
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0032991	protein-containing complex
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0000785	chromatin
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:1990904	ribonucleoprotein complex
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003852	2-isopropylmalate synthase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0050661	NADP binding
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0009982	pseudouridine synthase activity
molecular_function	GO:0051287	NAD binding
molecular_function	GO:0003942	N-acetyl-gamma-glutamyl-phosphate reductase activity
molecular_function	GO:0036459	thiol-dependent ubiquitinyl hydrolase activity
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0008097	5S rRNA binding
molecular_function	GO:0004748	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008026	ATP-dependent helicase activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0005488	binding
molecular_function	GO:0030234	enzyme regulator activity
molecular_function	GO:0004073	aspartate-semialdehyde dehydrogenase activity
molecular_function	GO:0004550	nucleoside diphosphate kinase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003746	translation elongation factor activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo11026	0.85	Barchart \| Table
Spo02218	0.81	Barchart \| Table
Spo22310	0.81	Barchart \| Table
Spo13481	0.81	Barchart \| Table
Spo07668	0.80	Barchart \| Table
Spo15583	0.80	Barchart \| Table
Spo22394	0.80	Barchart \| Table
Spo11943	0.80	Barchart \| Table
Spo05632	0.80	Barchart \| Table
Spo15751	0.80	Barchart \| Table
Spo20376	0.80	Barchart \| Table
Spo02011	0.80	Barchart \| Table
Spo23498	0.80	Barchart \| Table
Spo20789	0.79	Barchart \| Table
Spo23220	0.78	Barchart \| Table
Spo23193	0.78	Barchart \| Table
Spo27223	0.78	Barchart \| Table
Spo08816	0.78	Barchart \| Table
Spo06094	0.78	Barchart \| Table
Spo21922	0.78	Barchart \| Table
Spo13279	0.77	Barchart \| Table
Spo06904	0.77	Barchart \| Table
Spo18647	0.77	Barchart \| Table
Spo18094	0.77	Barchart \| Table
Spo16097	0.77	Barchart \| Table
Spo12311	0.77	Barchart \| Table
Spo12191	0.77	Barchart \| Table
Spo00170	0.76	Barchart \| Table
Spo08691	0.76	Barchart \| Table
Spo07075	0.76	Barchart \| Table
Spo19236	0.76	Barchart \| Table
Spo00780	0.76	Barchart \| Table
Spo26249	0.76	Barchart \| Table
Spo20647	0.76	Barchart \| Table
Spo20161	0.76	Barchart \| Table
Spo07432	0.76	Barchart \| Table
Spo25669	0.76	Barchart \| Table
Spo10322	0.76	Barchart \| Table
Spo17271	0.76	Barchart \| Table
Spo05783	0.76	Barchart \| Table
Spo24703	0.75	Barchart \| Table
Spo03701	0.75	Barchart \| Table
Spo18719	0.75	Barchart \| Table
Spo06136	0.75	Barchart \| Table
Spo25954	0.75	Barchart \| Table
Spo25349	0.75	Barchart \| Table
Spo12681	0.75	Barchart \| Table
Spo07402	0.75	Barchart \| Table
Spo02838	0.75	Barchart \| Table
Spo01999	0.75	Barchart \| Table
Spo06837	0.74	Barchart \| Table
Spo25306	0.74	Barchart \| Table
Spo05064	0.74	Barchart \| Table
Spo25635	0.74	Barchart \| Table
Spo19207	0.74	Barchart \| Table
Spo18532	0.74	Barchart \| Table
Spo04454	0.74	Barchart \| Table
Spo03046	0.74	Barchart \| Table
Spo13288	0.74	Barchart \| Table
Spo15132	0.74	Barchart \| Table
Spo00525	0.74	Barchart \| Table
Spo01086	0.74	Barchart \| Table
Spo09563	0.73	Barchart \| Table
Spo01061	0.73	Barchart \| Table
Spo02380	0.73	Barchart \| Table
Spo03802	0.73	Barchart \| Table
Spo05275	0.73	Barchart \| Table
Spo05946	0.73	Barchart \| Table
Spo07016	0.73	Barchart \| Table
Spo08488	0.73	Barchart \| Table
Spo09353	0.73	Barchart \| Table
Spo10980	0.73	Barchart \| Table
Spo15604	0.73	Barchart \| Table
Spo15711	0.73	Barchart \| Table
Spo20141	0.73	Barchart \| Table
Spo20410	0.73	Barchart \| Table
Spo20460	0.73	Barchart \| Table
Spo22578	0.73	Barchart \| Table
Spo24395	0.73	Barchart \| Table
Spo21186	0.72	Barchart \| Table
Spo02534	0.72	Barchart \| Table
Spo04381	0.72	Barchart \| Table
Spo07017	0.72	Barchart \| Table
Spo11870	0.72	Barchart \| Table
Spo07145	0.72	Barchart \| Table
Spo06501	0.72	Barchart \| Table
Spo01096	0.72	Barchart \| Table
Spo01092	0.72	Barchart \| Table
Spo12193	0.72	Barchart \| Table
Spo12304	0.72	Barchart \| Table
Spo02189	0.72	Barchart \| Table
Spo05461	0.72	Barchart \| Table
Spo12598	0.72	Barchart \| Table
Spo26636	0.72	Barchart \| Table
Spo23001	0.72	Barchart \| Table
Spo17903	0.72	Barchart \| Table
Spo05555	0.72	Barchart \| Table
Spo17929	0.72	Barchart \| Table
Spo05589	0.72	Barchart \| Table
Spo22740	0.71	Barchart \| Table
Spo12809	0.71	Barchart \| Table
Spo19413	0.71	Barchart \| Table
Spo19440	0.71	Barchart \| Table
Spo03527	0.71	Barchart \| Table
Spo03675	0.71	Barchart \| Table
Spo18434	0.71	Barchart \| Table
Spo11107	0.71	Barchart \| Table
Spo16351	0.71	Barchart \| Table
Spo00689	0.71	Barchart \| Table
Spo01001	0.71	Barchart \| Table
Spo07821	0.71	Barchart \| Table
Spo00363	0.71	Barchart \| Table
Spo14380	0.71	Barchart \| Table
Spo20519	0.70	Barchart \| Table
Spo18901	0.70	Barchart \| Table
Spo21068	0.70	Barchart \| Table
Spo05909	0.70	Barchart \| Table
Spo12516	0.70	Barchart \| Table
Spo12759	0.70	Barchart \| Table
Spo24902	0.70	Barchart \| Table
Spo13452	0.70	Barchart \| Table
Spo13561	0.70	Barchart \| Table
Spo07920	0.70	Barchart \| Table
Spo13856	0.70	Barchart \| Table
Spo23241	0.70	Barchart \| Table
Spo09833	0.70	Barchart \| Table
Spo23038	0.70	Barchart \| Table
Spo17017	0.70	Barchart \| Table
Spo17780	0.70	Barchart \| Table
Spo04667	0.70	Barchart \| Table
Spo18304	0.70	Barchart \| Table
Spo10999	0.69	Barchart \| Table
Spo18449	0.69	Barchart \| Table
Spo06318	0.69	Barchart \| Table
Spo05244	0.69	Barchart \| Table
Spo12071	0.69	Barchart \| Table
Spo11850	0.69	Barchart \| Table
Spo13048	0.69	Barchart \| Table
Spo12926	0.69	Barchart \| Table
Spo22809	0.69	Barchart \| Table
Spo05210	0.69	Barchart \| Table
Spo15050	0.69	Barchart \| Table
Spo26196	0.69	Barchart \| Table
Spo02397	0.69	Barchart \| Table
Spo15150	0.69	Barchart \| Table
Spo22520	0.69	Barchart \| Table
Spo27154	0.69	Barchart \| Table
Spo25176	0.68	Barchart \| Table
Spo13781	0.68	Barchart \| Table
Spo04531	0.68	Barchart \| Table
Spo14353	0.68	Barchart \| Table
Spo14875	0.68	Barchart \| Table
Spo06451	0.68	Barchart \| Table
Spo05889	0.68	Barchart \| Table
Spo07423	0.68	Barchart \| Table
Spo11288	0.68	Barchart \| Table
Spo20488	0.68	Barchart \| Table
Spo22410	0.68	Barchart \| Table
Spo00702	0.68	Barchart \| Table
Spo04755	0.68	Barchart \| Table
Spo20997	0.68	Barchart \| Table
Spo06493	0.68	Barchart \| Table
Spo24918	0.68	Barchart \| Table
Spo25841	0.68	Barchart \| Table
Spo23510	0.68	Barchart \| Table
Spo23976	0.67	Barchart \| Table
Spo08664	0.67	Barchart \| Table
Spo09208	0.67	Barchart \| Table
Spo00568	0.67	Barchart \| Table
Spo12048	0.67	Barchart \| Table
Spo13130	0.67	Barchart \| Table
Spo13506	0.67	Barchart \| Table
Spo13794	0.67	Barchart \| Table
Spo15235	0.67	Barchart \| Table
Spo15363	0.67	Barchart \| Table
Spo26488	0.67	Barchart \| Table
Spo15939	0.67	Barchart \| Table
Spo17172	0.67	Barchart \| Table
Spo17495	0.67	Barchart \| Table
Spo17696	0.67	Barchart \| Table
Spo04390	0.67	Barchart \| Table
Spo04323	0.67	Barchart \| Table
Spo19761	0.67	Barchart \| Table
Spo04219	0.67	Barchart \| Table
Spo26719	0.67	Barchart \| Table
Spo26884	0.67	Barchart \| Table
Spo23398	0.67	Barchart \| Table
Spo23513	0.67	Barchart \| Table
Spo06851	0.67	Barchart \| Table
Spo07667	0.67	Barchart \| Table
Spo06742	0.67	Barchart \| Table
Spo19756	0.66	Barchart \| Table
Spo03105	0.66	Barchart \| Table
Spo02928	0.66	Barchart \| Table
Spo18393	0.66	Barchart \| Table
Spo16627	0.66	Barchart \| Table
Spo13707	0.66	Barchart \| Table
Spo13621	0.66	Barchart \| Table
Spo09915	0.66	Barchart \| Table
Spo23681	0.66	Barchart \| Table
Spo07962	0.66	Barchart \| Table
Spo05547	0.66	Barchart \| Table
Spo12994	0.66	Barchart \| Table
Spo12391	0.66	Barchart \| Table
Spo05660	0.66	Barchart \| Table
Spo11756	0.66	Barchart \| Table
Spo10599	0.66	Barchart \| Table
Spo10584	0.66	Barchart \| Table
Spo10518	0.66	Barchart \| Table
Spo19970	0.66	Barchart \| Table
Spo20846	0.65	Barchart \| Table
Spo07054	0.65	Barchart \| Table
Spo00342	0.65	Barchart \| Table
Spo03131	0.65	Barchart \| Table
Spo19833	0.65	Barchart \| Table
Spo22318	0.65	Barchart \| Table
Spo10390	0.65	Barchart \| Table
Spo19254	0.65	Barchart \| Table
Spo04311	0.65	Barchart \| Table
Spo19200	0.65	Barchart \| Table
Spo06997	0.65	Barchart \| Table
Spo17617	0.65	Barchart \| Table
Spo10147	0.65	Barchart \| Table
Spo16367	0.65	Barchart \| Table
Spo05190	0.65	Barchart \| Table
Spo05417	0.65	Barchart \| Table
Spo14692	0.65	Barchart \| Table
Spo08285	0.65	Barchart \| Table
Spo05748	0.65	Barchart \| Table
Spo19500	0.65	Barchart \| Table
Spo03473	0.65	Barchart \| Table