Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACGGGATAGGGTATGAGTGCATGATTGTATAATAAGATCAAACTTAGGCTTATGCTATAGATGGTATGGGCTTAGCTAGAGATAAGCCCAGCCCAAATAACCCCCTTCAACTTTAACTCAAATTCTCAAAATAATTTATTTTTTAAAAGAAAAAGGAAAAGCCATTGCTGCGGTAAATTAAAGCTCAACAATTGCTCATTTGCACTTTCAATCTGAACTTTGTACTACTAATCACAAAGTACGTTTTCCATTTGATTCCCTATAAATTATTTGTCCATTCTTAAAAATTAGGGTTCCTCATTTTATTTTGTGAAATTTGATTTAGATTTTAACAAAAAAAATTGAAACTTGAATTTCAGGATCGCAAACATAATAGGAGCACAAGCCGATTGAGTTGATTTTGAGTTAATTCAAAAAAAATGGATCCAGATGCAGTGAAATCAACTTTCTCTAATTTAGCTATGGGCAATGTCATGGCTGCTGCTGCTCGCAATCTTCAGAAGGTAATTTTACTCTCTCTGCCCTTTTACATAGTTCGTCATTCAATTAAAGGCTGGTGGTAGTATTCGTGATAATCGTGGGAATTTTATTGAATTAGGCTTGGCCATGTAAATGTTGTTTTTTTAGCTTGATTTTTGAACAATTAGTAAATGCCTGGTTTTTTTAAATTTTTTTATGGAATATTGGTTGTAGTTATAATTTTCAACTGGACATTGTAGCTATGAACTATGTTACTCAGACGCTACTTGAAATACCAGATATGGGTGCGTGTCCAAGTGTGAGACAAGACCATTTACTGAGATTTATGCCTAAAATGAGGTATCTAGATGCAATACCAATGTCTGAGTGTCGAGCATTCAACTGTACTTGAGGTGAAATGAAGAGTCGTATTCACATGCCCATGAATTAGAAACATGTGCATGGGTTTTTAAAGGCGGAGTATGTTCAAAATCATGAGGGCTTTTACTAATTATTATGTTCAGCCATGGAATGTTGTTCAAAGTGTGGACTATGGCCATGGATATGTGTCTGTGATCTAATTTGCGATTGTTGTTTAGTTAGTATGGATTTTAACAATTAAGTACATATTTGTTTTTTCGAAATGCTGGGATGGTACTCATCTAAAGAGTATGATGTTTTGCCTTTGTTTTTTAGTGTTACTAAAAATTACTTCCTCCATTCTTATTTACATGACACAATTGAGTTTTGGACACTATTCATACAAGCTCCTTTGACTTCCTTTTGTGATTTATACTTCAGAAAAAACATAGTCATGTGGAGTCTTGTTAGATTCGTCTCAATAAATATTTTTTAAATATCAACATTCTATAATTTTTCTTATCCATAGTTGAAGTTATTAATGTTTGAAATCATGCATTGGCAAATATAACTAAATAATTATGTCATGTAAATAAGAACAGAGAAGTACTTTGCAGTGTGATACTATCATAGTCTAGATAGCATTGTGCTTAATTTCTTAAAAGAGCGATGTTCCTAGCTGTTCTGATTTCTAATTTTACATCCAAGTTCTGAAATTGATAGGCCTGATTTTGGAGAGTTTTACTTCAGAGCACAAATTTAAGTGGATATGCTAAAACAATTCTGTTGTTGACAAATTTTGATTTGGTGTTTGTTGAGTATGTGCCGTGCCTATAGTCAGATATAAGAGACAAATTCAATACTGTGTTTTCAACCTTGATCAGTTTGTTTATTAGGGATAATGTATCAAGCCTCGATGGTTTGCTAGTTGGAAACTCATGTTCCTCCATCTCTTTGATGTTTGTATGGCATGTAAACAGTTCACTTAACTGGTGTTACAGGAAATGATAGTTCAAGAGAAGACACAGGCTTCAAGTTCAGCTAATGACGAGATTGATCTTGATGAGTTGATGGATGTAAGTTGTAGAACACTTTGCTTATTGGTTGGATGTTTCTTATGCTTATTCTTCAGTGCTTGACTGTATGTTTCTTTCTGTAATACCAGGACCCAGAGCTAGAGAGATTACATGCTGAGAGAATTGCAGCACTACAGGTTTAAATTCTCCTTCAATATTGGCTTCTGCTACGTAAAGTCCTTAAAGTATTCACCCTATGCCCTATGGTATATTTTCTCAGAAAGAAGCTGAGAAGCGACAAGAAATGAAGAAACAGGGCCATGGAGAATATAGAGACATAACTGAAGGGGATTTTTTGGGTGAAGTTACTGCGAGCGAACTAGTTATCTGCCATTTCTACCATCGGGAGTTCTATCGATGCAAGTAAAACCCTAATCTTACATTGTATCTAATTATTAATATTAAATGTTTTATTGAAGCCATTAAATAATTTTAAAGGCCTTTTCTTCACTAGCATGATCTCAGTGACATGAAATATCCCCTTGCTATCGTTAAGTTGTGGCAGACTGACAGGAGGTTCTTGTAAGATTAAAGAAGACGAATAGAATCCACTTTGACAGGTTATGCTAAAATAAGTGCAGACTGTCTAGATGTATGACAACAGTGTTCAGGCATCTCTATTGCAGTTTTCTACCAGCGGATAGAGAGTCCTCTAGTTCTCGTTTTCCATGAAAATAAAAAAAATTATGCGAAGCCCCATCTTCAATGCTGCTTAGCGGAATACAGCATTTTGATGTTTCGGTCATTGTTAAAATATGCAGCTTGCTGAGCTGACAAGTTTCTATTTGCAGAAATGTGTACATGGTTTGGTTATTGAATTAATAAGTTTTTTGCTATCTTTTTCAGGATAATGGATAAGCATTTGAAGGCACTTGCACCCAAGTACCTTGATACCAAGTTTTTAAAACTGGATGCGGAGGTTAGCTCTCTTAGTCTTTTCTAGTGGTGTTACTTTATGAAGTTGCATGCCTTCTTTTTGTTCAGCTTGCCGCTTGCTTACTTTGCGAGCTCTAAGTTTTGGTGTCTCTAATGACTGTGAATTGTGAATGACAAACTGACGATGTATACCAAATGCAGAATGCCCCCTTCTTCATATCCAAGCTTGGAATCAAAACTTTGCCATGCGTTATACTATTCAGGTTACTTTTCCATCTTATCTGTCTGTCAAATCCTATATTATCATTTAAAAGTTAGGTTGCATTCGGAAACATGGAATTCATTTCAAGTGATGAAATTCAATTTCTGGAATTGAAATCTTGGAATTCAATTCCAAAATTTGTGTTTGGTAAACATAAGAATTTCAAATGCAAAATTCCAAATTTAAATAGGTTGTTTGGGGAATCAAAGGAATTTCAATTAATTTAATGCACTGCTTTGCTTGTAAACTAATTATTAAAAATAGCATATTACACCCAAAAAAAGTCAAGAACAATGGTGTTTAATGCCAGTAGAAAAAGATACCAGTCAATTATCATTATCATTACCCCATTGCTTCAAAGAGGCTCCCACAAGAAGCGGGGTAAGAGGGGTCAGACGTACGCAACCTTACCCCTGCAATTGCAGAGAGGTTGTTTCCAATTGACCTTAAAAGCGATAACGGGACGACAACAGGACGACCATCTCGTAATTCATGGAAAGGAAGCGAAGAGGTATTTGATTTAGAAAAATACTAGTCCAAAATCGGAAAAAAATGTAATAATTCAACAATAATTATGTCAGTTCATCGAATTATTTGATTAATAAACAATGAAATACATAAAATTAAAATCAGCCTTGTTAATGATCAACTGGAGTTCCATACGAATTTGGGGAAAAAACCCCTAACCCTAACTCTTTCGATTTTCTTCAATCTTTAAACGTTATTGCATGAAGCAAGGAAAGGAGGATGGAAGGATCAACACCGATATCCAGTTACATGTCAGTGGTGGGCCTGGTGGTGGCGACGATCTGGATGTGAGAAGGCAACGGCAAGAAGGCGACGAAGAGGTTGCGAGAACGAGTGGTGAACAGGAGAGAGAATTGATTGAGATTGAGAGGAGGCAATAAGGAGTTGGAGGTGGAGGTCGGGGTCGGGGTGGTTCTCTTGGTGGTGGCTAATTAGCGATGGAGTGACTGAACCTTTTTTTTCTTTTTCTTTGAGGGGATGGAGTCACTGAATTTAGAGGACAGAGAATGGTGGTTGGCCGCAAATCAGTGATGGAGCAAGCTTCAATTCAAAGGATTTGAAACGACAGTAAATTAGATTGCACTTCAAATACTAGGCCCAAACTTATTTTTCCATGTCCTTGGATTTGAGCCAAATCCAAATACAATTCTTTTTAATTCCCAAGCATGTTATTTGGGCCAAATCCAGCATTTGAAATGAAATCTCCATTCCCAAACAGGCCATTAGAGCATTCAACTGCATGCTGCATTGCCTCATTTGCCTGAAAACCCCAAAGAAATAGAGCAATTGCGTTTGTTTCTGTACCCTCGATTATTTAAAGTTTTTTCCTACCCATTAAGAGCTCGCCCCTGTCTTTTCACCTTATTTTACTGAACATGTGCCTTTCTACCTTAGTGACCCACTTTTGTGGGTATAGTTTCTTTTTCTTTGGGTAAATGGCGTAGGAGAAAGTGAAAATTCTTATAACAGTCTTTGTGAAGAGGATGTTGGGTGAAGGTAAAATATGAAATAAAGGAAGTTTCACCAGTATTTGTTATTGAGCATCACAGTTAATTACATTTAAAGTTGTTGCATCTGAATTTGGATCTCCTGTTTCAGGAAAGGAATAGCAGGTGATAGACTAGTTGGGTTTCAAGATGTAGGTGGAAAAGACGATTTCCCTACGAGGAGACTGGAAAATCTGTTGATCAAGAAAGGTAATGATTTTTTGTTTAATTTGTTTAATTTGGTGTTTGCTATTCTGTGTCTGACCAGTTGATTACAGGTATGATCAAGGATAAGGAAAAAGAAGACGAGGAGGATTATTCTGAAAGTAAACGCACGTCTGTCAGATCATCATTGAACCTTGGTTCAGATTCTGATGAAGAATAGAAGGAAAGAGAGCAACCTTTTCTCCCTCTGTATTATGTACTGATTATCAAGTCCTTGTGATTTTACTATGGTAAATTGGCAATATTCCGTGTTGCGTTGCTGTTGATATGTTCTGGAAATCAACTTCAAATCATAAATACCAAGAATTTTTTTTAGTTTATGATTCATTTCTTTTAAGCCTTAGTTTTTTACAGGCTCAAAATTATGTGTATTAAACTCAAAATCTTTAGGTCAAGTTGAAACTTGAAAGTTGGAGCAGCCACTGAATCACTGATAGCAAACAATGATGCAGTTACCTCTCCTATACGGCTTACGGCTATACTCATATCAACGATCTTACCATATGATCGGTGTTACCTTACAATTTTACTTGTGTAAACTGTAAATCATCTACAATTAACACTAAATAAATACTCCGTAGATATTATGAG ACGGGATAGGGTATGAGTGCATGATTGTATAATAAGATCAAACTTAGGCTTATGCTATAGATGGTATGGGCTTAGCTAGAGATAAGCCCAGCCCAAATAACCCCCTTCAACTTTAACTCAAATTCTCAAAATAATTTATTTTTTAAAAGAAAAAGGAAAAGCCATTGCTGCGGTAAATTAAAGCTCAACAATTGCTCATTTGCACTTTCAATCTGAACTTTGTACTACTAATCACAAAGATCGCAAACATAATAGGAGCACAAGCCGATTGAGTTGATTTTGAGTTAATTCAAAAAAAATGGATCCAGATGCAGTGAAATCAACTTTCTCTAATTTAGCTATGGGCAATGTCATGGCTGCTGCTGCTCGCAATCTTCAGAAGGAAATGATAGTTCAAGAGAAGACACAGGCTTCAAGTTCAGCTAATGACGAGATTGATCTTGATGAGTTGATGGATGACCCAGAGCTAGAGAGATTACATGCTGAGAGAATTGCAGCACTACAGAAAGAAGCTGAGAAGCGACAAGAAATGAAGAAACAGGGCCATGGAGAATATAGAGACATAACTGAAGGGGATTTTTTGGGTGAAGTTACTGCGAGCGAACTAGTTATCTGCCATTTCTACCATCGGGAGTTCTATCGATGCAAGATAATGGATAAGCATTTGAAGGCACTTGCACCCAAGTACCTTGATACCAAGTTTTTAAAACTGGATGCGGAGAATGCCCCCTTCTTCATATCCAAGCTTGGAATCAAAACTTTGCCATGCGTTATACTATTCAGGAAAGGAATAGCAGGTGATAGACTAGTTGGGTTTCAAGATGTAGGTGGAAAAGACGATTTCCCTACGAGGAGACTGGAAAATCTGTTGATCAAGAAAGGTATGATCAAGGATAAGGAAAAAGAAGACGAGGAGGATTATTCTGAAAGTAAACGCACGTCTGTCAGATCATCATTGAACCTTGGTTCAGATTCTGATGAAGAATAGAAGGAAAGAGAGCAACCTTTTCTCCCTCTGTATTATGTACTGATTATCAAGTCCTTGTGATTTTACTATGGTAAATTGGCAATATTCCGTGTTGCGTTGCTGTTGATATGTTCTGGAAATCAACTTCAAATCATAAATACCAAGAATTTTTTTTAGTTTATGATTCATTTCTTTTAAGCCTTAGTTTTTTACAGGCTCAAAATTATGTGTATTAAACTCAAAATCTTTAGGTCAAGTTGAAACTTGAAAGTTGGAGCAGCCACTGAATCACTGATAGCAAACAATGATGCAGTTACCTCTCCTATACGGCTTACGGCTATACTCATATCAACGATCTTACCATATGATCGGTGTTACCTTACAATTTTACTTGTGTAAACTGTAAATCATCTACAATTAACACTAAATAAATACTCCGTAGATATTATGAG ATGGATCCAGATGCAGTGAAATCAACTTTCTCTAATTTAGCTATGGGCAATGTCATGGCTGCTGCTGCTCGCAATCTTCAGAAGGAAATGATAGTTCAAGAGAAGACACAGGCTTCAAGTTCAGCTAATGACGAGATTGATCTTGATGAGTTGATGGATGACCCAGAGCTAGAGAGATTACATGCTGAGAGAATTGCAGCACTACAGAAAGAAGCTGAGAAGCGACAAGAAATGAAGAAACAGGGCCATGGAGAATATAGAGACATAACTGAAGGGGATTTTTTGGGTGAAGTTACTGCGAGCGAACTAGTTATCTGCCATTTCTACCATCGGGAGTTCTATCGATGCAAGATAATGGATAAGCATTTGAAGGCACTTGCACCCAAGTACCTTGATACCAAGTTTTTAAAACTGGATGCGGAGAATGCCCCCTTCTTCATATCCAAGCTTGGAATCAAAACTTTGCCATGCGTTATACTATTCAGGAAAGGAATAGCAGGTGATAGACTAGTTGGGTTTCAAGATGTAGGTGGAAAAGACGATTTCCCTACGAGGAGACTGGAAAATCTGTTGATCAAGAAAGGTATGATCAAGGATAAGGAAAAAGAAGACGAGGAGGATTATTCTGAAAGTAAACGCACGTCTGTCAGATCATCATTGAACCTTGGTTCAGATTCTGATGAAGAATAG MDPDAVKSTFSNLAMGNVMAAAARNLQKEMIVQEKTQASSSANDEIDLDELMDDPELERLHAERIAALQKEAEKRQEMKKQGHGEYRDITEGDFLGEVTASELVICHFYHREFYRCKIMDKHLKALAPKYLDTKFLKLDAENAPFFISKLGIKTLPCVILFRKGIAGDRLVGFQDVGGKDDFPTRRLENLLIKKGMIKDKEKEDEEDYSESKRTSVRSSLNLGSDSDEE Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo03984.1 vs. NCBI nr
Match: gi|902172506|gb|KNA08136.1| (hypothetical protein SOVF_165340 [Spinacia oleracea]) HSP 1 Score: 443.4 bits (1139), Expect = 2.500e-121 Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 1
BLAST of Spo03984.1 vs. NCBI nr
Match: gi|731327061|ref|XP_010674335.1| (PREDICTED: thioredoxin domain-containing protein PLP3B-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 387.5 bits (994), Expect = 1.600e-104 Identity = 197/228 (86.40%), Postives = 214/228 (93.86%), Query Frame = 1
BLAST of Spo03984.1 vs. NCBI nr
Match: gi|449464172|ref|XP_004149803.1| (PREDICTED: thioredoxin domain-containing protein PLP3B [Cucumis sativus]) HSP 1 Score: 354.0 bits (907), Expect = 2.000e-94 Identity = 173/227 (76.21%), Postives = 206/227 (90.75%), Query Frame = 1
BLAST of Spo03984.1 vs. NCBI nr
Match: gi|659133453|ref|XP_008466737.1| (PREDICTED: thioredoxin domain-containing protein PLP3B-like [Cucumis melo]) HSP 1 Score: 352.1 bits (902), Expect = 7.500e-94 Identity = 173/227 (76.21%), Postives = 204/227 (89.87%), Query Frame = 1
BLAST of Spo03984.1 vs. NCBI nr
Match: gi|970005620|ref|XP_015063649.1| (PREDICTED: thioredoxin domain-containing protein PLP3B [Solanum pennellii]) HSP 1 Score: 348.2 bits (892), Expect = 1.100e-92 Identity = 175/228 (76.75%), Postives = 203/228 (89.04%), Query Frame = 1
BLAST of Spo03984.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QNK6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_165340 PE=4 SV=1) HSP 1 Score: 443.4 bits (1139), Expect = 1.700e-121 Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 1
BLAST of Spo03984.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CPM7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g078070 PE=4 SV=1) HSP 1 Score: 387.5 bits (994), Expect = 1.100e-104 Identity = 197/228 (86.40%), Postives = 214/228 (93.86%), Query Frame = 1
BLAST of Spo03984.1 vs. UniProtKB/TrEMBL
Match: A0A0A0KDC1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G382930 PE=4 SV=1) HSP 1 Score: 354.0 bits (907), Expect = 1.400e-94 Identity = 173/227 (76.21%), Postives = 206/227 (90.75%), Query Frame = 1
BLAST of Spo03984.1 vs. UniProtKB/TrEMBL
Match: K4B6E2_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 7.600e-93 Identity = 175/228 (76.75%), Postives = 203/228 (89.04%), Query Frame = 1
BLAST of Spo03984.1 vs. UniProtKB/TrEMBL
Match: M1B980_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400015493 PE=4 SV=1) HSP 1 Score: 347.4 bits (890), Expect = 1.300e-92 Identity = 174/228 (76.32%), Postives = 202/228 (88.60%), Query Frame = 1
BLAST of Spo03984.1 vs. ExPASy Swiss-Prot
Match: PLP3A_ARATH (Thioredoxin domain-containing protein PLP3A OS=Arabidopsis thaliana GN=PLP3A PE=1 SV=1) HSP 1 Score: 337.8 bits (865), Expect = 9.200e-92 Identity = 169/230 (73.48%), Postives = 200/230 (86.96%), Query Frame = 1
BLAST of Spo03984.1 vs. ExPASy Swiss-Prot
Match: PLP3B_ARATH (Thioredoxin domain-containing protein PLP3B OS=Arabidopsis thaliana GN=PLP3B PE=2 SV=1) HSP 1 Score: 333.6 bits (854), Expect = 1.700e-90 Identity = 164/230 (71.30%), Postives = 197/230 (85.65%), Query Frame = 1
BLAST of Spo03984.1 vs. ExPASy Swiss-Prot
Match: TXND9_HUMAN (Thioredoxin domain-containing protein 9 OS=Homo sapiens GN=TXNDC9 PE=1 SV=2) HSP 1 Score: 136.3 bits (342), Expect = 4.100e-31 Identity = 81/213 (38.03%), Postives = 126/213 (59.15%), Query Frame = 1
BLAST of Spo03984.1 vs. ExPASy Swiss-Prot
Match: TXND9_MOUSE (Thioredoxin domain-containing protein 9 OS=Mus musculus GN=Txndc9 PE=1 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 1.500e-30 Identity = 85/217 (39.17%), Postives = 128/217 (58.99%), Query Frame = 1
BLAST of Spo03984.1 vs. ExPASy Swiss-Prot
Match: PHLP3_DICDI (Phosducin-like protein 3 OS=Dictyostelium discoideum GN=phlp3 PE=2 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 3.500e-30 Identity = 70/163 (42.94%), Postives = 106/163 (65.03%), Query Frame = 1
BLAST of Spo03984.1 vs. TAIR (Arabidopsis)
Match: AT3G50960.1 (phosducin-like protein 3 homolog) HSP 1 Score: 337.8 bits (865), Expect = 5.200e-93 Identity = 169/230 (73.48%), Postives = 200/230 (86.96%), Query Frame = 1
BLAST of Spo03984.1 vs. TAIR (Arabidopsis)
Match: AT5G66410.1 (phosducin-like protein 3 homolog) HSP 1 Score: 333.6 bits (854), Expect = 9.800e-92 Identity = 164/230 (71.30%), Postives = 197/230 (85.65%), Query Frame = 1
BLAST of Spo03984.1 vs. TAIR (Arabidopsis)
Match: AT3G25580.1 (Thioredoxin superfamily protein) HSP 1 Score: 128.6 bits (322), Expect = 4.800e-30 Identity = 78/207 (37.68%), Postives = 120/207 (57.97%), Query Frame = 1
BLAST of Spo03984.1 vs. TAIR (Arabidopsis)
Match: AT2G18990.1 (thioredoxin domain-containing protein 9 homolog) HSP 1 Score: 128.3 bits (321), Expect = 6.300e-30 Identity = 80/205 (39.02%), Postives = 121/205 (59.02%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo03984.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo03984.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo03984.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo03984.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 4
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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