Spo03987 (gene)

Overview
NameSpo03987
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionSecE/sec61-gamma subunit of protein translocation complex protein
Locationchr1 : 47294319 .. 47298013 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCATTGTGCCACATTTAAGGAACGGAGGAATTAAGTACAAATTACCATTTCTACCCTTATATCACATCCCCTCCTCAGTCCCTCACTCAGTTAACTCCACCCAGACCACAACCATAACGACCAGGCCCACCCTACCCCCACTTAAATTTCCCGGCCACCACCACTACCACAGCCACTCACCCGAAGCCCTAAATTAGGAAATTGAATATGATTATACTTTATTAACCTAAATTAGGTTTTCAATTAGTAACGATTAACTGTTTGTTGTTGCTATTTCCAGGGAATTTCAATTAATTTGGTTTGTTGCTGATAGAAATGGCTACTTTTTCTGGGTTGTCGTCAAATTCTTCAGGTACCAACCTCATTTACTCTACAAATCACTGAAATTTCTGAATATTGTGAATAGTTGTATGGAAGACATTGAAAAATTTCTCACTGCGCTTTTTATTTAATGTAGTTTTGGGTTATAATAATGGCAACCCAATGCTTTCATTTCGATATCGAATGTCGATTGAAGCCAACACTAGAGGCTTGGTTACTTGTAAATTTGTACCAAAATGGGTAAAATATTTGTCTAATTGTTCTATTGATTATGATTTCTCTAAGCATATTAGTGTTTTGTATTGATTTTTTAAATTGCCTATTTTTATATATTGCTAGGATTTAAGGTCAGAGATCCATTATTCTCACAAGAAGCAGGTTCAACCTCGGTTTTCGATGTCTCGGGGAGGAAATTATGGTTTAAAGTTTGATGATGAGTGTGCTGAGGACCCATTTTGGCTACGTTTCTCTAAGGAAACAATCAGGTATTAAGATTAGAAGCAATTGTGTGGATTCTGGTTTCACATTGGGGTACTAGTAGCCTGTAATTGTACTGAGTTGTTTGTTGTGCCATATTCTTTTCAGGGGTTTGAAATCATTGGTTAGGTTCCTTGTTCAACAACCTGGGCAGCTGAAGTACATAGAATGGCCGAGTTTTAACGACACGGTACAATCCTTGCCTAAATAATGGATACATCTTTGTTTATTGCATTTTATTTGCTTCTGTAGAATAGTTTAGGCCTTGTTCAGTTTGAACAGATACTTGTCTGAATTGTGGTAGTATGATTGCCTATGTTATTTAACTTTAAACAGAAATCGTCGAATAAGAATATGTCAATCATCAGGTCATTGTGCGAACAAGATGCATACTACTTCTGTTTTAACATAGTCTAGTCTCTTAGTACTCGTAAATGAAAGTCCATAGATGAATTGATGGAGTTTCTAGGACATCGTATCTCTTGAAACCTTTGGCAAAGTTTCTATGTAATTTTGCTATATATGGAGCATACTACAATTAGATGCTGCAGTTGAATGATTAGACCTTGCTGGGGTTGAACTTGTTGTAAAATTTGTTTGAATGTGTTCTTGAAATATATTGACAAAAGACTTAGAATGCAAACTTGGGAGCTCTAATAACTTGGTTTTTTTTTTGGGTGCAAACCTACAAAGTTTTGCTATTTATCTCATTGGCGCTTTTAGTGTAATTTCCCATGGAAACTATCCTGGTAGACTGGTAGTTTGTTTGAGATCTACAGGACATCATCTCATCATATTGCCTTAGACTCGTGAGTCTAAGAACAGCACTGTAAGTGCCTTATTGATTATATTTCATTTCTTTCTTCCAAACCAAGCCCTTATCGAAGAGCATGATTTCAATTTAATTGTAACAACTTGATGTGTCTGGAACATGTCGATTAGGTATAGTAACAACGTTGATTTGGTTACAGAGATGCATAATATTTATACGGAGTACATAACAGTCTTGTGTATTTTCTTTTTTCTCCCCTCTTCTCTCCCAATAATGGCGCTGGGCCTGGACATGCTTGCAATATTATTTGGGTTATTTTCTATGATGTTTTAAATCCTTTCTGTTGTTAGAAAGCATTATTGTATGACTCTGACTGAACAAAGGGACCCTAGATTGCCTATCAAAAAACCTGTATGTTTAATGCTAAGTGTAAGGGTAGTTTGGGTATTATATTAAAGGTGAGGGCATTTGGTGAATTTTGTGAAAATTGAGGGGCATTTCATGACAAATCCGTATTTTTTTAATAGTTTGTAAAATGACATCCATTTTGCTATACTTTGAACATGTTTAAATTTTAGTAATCATTTACTTGATGAAAGAGTGGAAAATGGGTGAGGAATTGATGAGTGTTTTTTTGGGGTGAGGGAACCAGGAGAATGCAAATCACTACTCTGTTTAGCTTTTTGGTGAACGCCTCAAGTTATTTGATGAAATTAGTCTGACCAAGATAATAAGGAGAAAAAAATTTAGAAATAAAAGAGATCAAATATGTACGAGTTTTCCACAAGGGCAATACAAATTAGTGAAATTACAAATGGGGAAATATGATAGCTCTGCTAATGGGGCTAGGTTATGACTTTTGAGTGGGGGGTTTGGAGAGAGGATATACTAAAATCATGTAAATGAATTAGAATTACTTCCATCGACTCAGATATCATACAGGATATACTGTTCTGTTTATTTAATCGGTCTTCACTTACTGGTTACATAAAGCAGTTCTAGATCAGAAGATAGTGACCTCGAGTGTTTGGTTTAGAGATCTGTGGAACTTTACTGTGTACTGTCAATTAGTTGTAGCTCAGACGCCTAAGGATTCAAGAAGATTAAGTTGAGTCGGCTGTAGGTGGTGAAGAGCAGGTTGGTTTTGAGTCAGCTGGTGGTGGAGCACCTAGCTGAAAATAGCATGGTTTAAAAGTCAAATTGATTTGATGCTCCTGGTTCACTTGAATAGTTAAATCTGCCGAAGAAGTTGGGGTTTTGATTGATTTAAAACTTGGGCAGATTGAAGCTTAATACTAAAATCTGTGAAGTATTCACCTTAGTAACAACTAACAAGGTAGTTGATTTCTTTGCTTGCAGCTGATGGCTAATTCTGTTTAAGAAAACAGGTTTGTTTGATTGATTTATTGCATAGGCTGCCTTAGATGAAACTAATCTAGCCTTTGCTAAGGTCCAATTGGGTAACTTTGCCAGAGATTACACAAAGTAGTTTTGACAACAGGGTTAGGGGAGTAGAGGCAGAAGAAAGAATGTTTAGCACATTAATGCTGTGTGCCATAGAAAGCAGTAAAGTGGTGCATATAAAAAGTCCGAAACCTAACCTAGCCTGACATAACCTTTGGTGCCTGATGTATTGATTAAGAATTAAGATGCTTGATTGCTTGTTTGTGTCAAAAGCATGCGTTTTGTGAGGGGGAATCTAATAGTTTTCTCCTTTTGTTTTTGGTTGCAGCTGCGAACTGCCACCCTCACCCTTGTACTTGTAGCCGGGCTTATTGTTGCTTTGTCTTCAATTGATGCTGGACTTTCTTATGTGTTGGCACTACTTCTGCGAAAACCTGCATGACACAACCTGTTTTGGTCTCGGCTCTAGCTTTTCTGACAGACAACACTGATTTTACCAGTAGCGTCGACAGAATTTCATCTTTGGAGGCTCAACTTGATAGATTTAAGATCAGTGTACATTGTAAACTAGTCAACTAGGACAAAGGGCTTTGGTAAAAGTATGCTGTAAGTTTGATCTTGTCTATAACATAGTACTTTGTATTTCCTTACCATTAAAGTATGTTGATCATATAATTGTTTTACCATTAAATGGCAAGTAACTAAACATTTTCCGTTATAA

mRNA sequence

CCATTGTGCCACATTTAAGGAACGGAGGAATTAAGTACAAATTACCATTTCTACCCTTATATCACATCCCCTCCTCAGTCCCTCACTCAGTTAACTCCACCCAGACCACAACCATAACGACCAGGCCCACCCTACCCCCACTTAAATTTCCCGGCCACCACCACTACCACAGCCACTCACCCGAAGCCCTAAATTAGGAAATTGAATATGATTATACTTTATTAACCTAAATTAGGTTTTCAATTAGTAACGATTAACTGTTTGTTGTTGCTATTTCCAGGGAATTTCAATTAATTTGGTTTGTTGCTGATAGAAATGGCTACTTTTTCTGGGTTGTCGTCAAATTCTTCAGTTTTGGGTTATAATAATGGCAACCCAATGCTTTCATTTCGATATCGAATGTCGATTGAAGCCAACACTAGAGGCTTGGTTACTTGTAAATTTGTACCAAAATGGGATTTAAGGTCAGAGATCCATTATTCTCACAAGAAGCAGGTTCAACCTCGGTTTTCGATGTCTCGGGGAGGAAATTATGGTTTAAAGTTTGATGATGAGTGTGCTGAGGACCCATTTTGGCTACGTTTCTCTAAGGAAACAATCAGGGGTTTGAAATCATTGGTTAGGTTCCTTGTTCAACAACCTGGGCAGCTGAAGTACATAGAATGGCCGAGTTTTAACGACACGCTGCGAACTGCCACCCTCACCCTTGTACTTGTAGCCGGGCTTATTGTTGCTTTGTCTTCAATTGATGCTGGACTTTCTTATGTGTTGGCACTACTTCTGCGAAAACCTGCATGACACAACCTGTTTTGGTCTCGGCTCTAGCTTTTCTGACAGACAACACTGATTTTACCAGTAGCGTCGACAGAATTTCATCTTTGGAGGCTCAACTTGATAGATTTAAGATCAGTGTACATTGTAAACTAGTCAACTAGGACAAAGGGCTTTGGTAAAAGTATGCTGTAAGTTTGATCTTGTCTATAACATAGTACTTTGTATTTCCTTACCATTAAAGTATGTTGATCATATAATTGTTTTACCATTAAATGGCAAGTAACTAAACATTTTCCGTTATAA

Coding sequence (CDS)

ATGGCTACTTTTTCTGGGTTGTCGTCAAATTCTTCAGTTTTGGGTTATAATAATGGCAACCCAATGCTTTCATTTCGATATCGAATGTCGATTGAAGCCAACACTAGAGGCTTGGTTACTTGTAAATTTGTACCAAAATGGGATTTAAGGTCAGAGATCCATTATTCTCACAAGAAGCAGGTTCAACCTCGGTTTTCGATGTCTCGGGGAGGAAATTATGGTTTAAAGTTTGATGATGAGTGTGCTGAGGACCCATTTTGGCTACGTTTCTCTAAGGAAACAATCAGGGGTTTGAAATCATTGGTTAGGTTCCTTGTTCAACAACCTGGGCAGCTGAAGTACATAGAATGGCCGAGTTTTAACGACACGCTGCGAACTGCCACCCTCACCCTTGTACTTGTAGCCGGGCTTATTGTTGCTTTGTCTTCAATTGATGCTGGACTTTCTTATGTGTTGGCACTACTTCTGCGAAAACCTGCATGA

Protein sequence

MATFSGLSSNSSVLGYNNGNPMLSFRYRMSIEANTRGLVTCKFVPKWDLRSEIHYSHKKQVQPRFSMSRGGNYGLKFDDECAEDPFWLRFSKETIRGLKSLVRFLVQQPGQLKYIEWPSFNDTLRTATLTLVLVAGLIVALSSIDAGLSYVLALLLRKPA
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo03987.1Spo03987.1mRNA


Homology
[Close]
BLAST of Spo03987.1 vs. NCBI nr
Match: gi|902228858|gb|KNA21289.1| (hypothetical protein SOVF_044480 [Spinacia oleracea])

HSP 1 Score: 322.0 bits (824), Expect = 5.800e-85
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 1 

		  

Query: 1   MATFSGLSSNSSVLGYNNGNPMLSFRYRMSIEANTRGLVTCKFVPKWDLRSEIHYSHKKQ 60
           MATFSGLSSNSSVLGYNNGNPMLSFRYRMSIEANTRGLVTCKFVPKWDLRSEIHYSHKKQ
Sbjct: 1   MATFSGLSSNSSVLGYNNGNPMLSFRYRMSIEANTRGLVTCKFVPKWDLRSEIHYSHKKQ 60

Query: 61  VQPRFSMSRGGNYGLKFDDECAEDPFWLRFSKETIRGLKSLVRFLVQQPGQLKYIEWPSF 120
           VQPRFSMSRGGNYGLKFDDECAEDPFWLRFSKETIRGLKSLVRFLVQQPGQLKYIEWPSF
Sbjct: 61  VQPRFSMSRGGNYGLKFDDECAEDPFWLRFSKETIRGLKSLVRFLVQQPGQLKYIEWPSF 120

Query: 121 NDTLRTATLTLVLVAGLIVALSSIDAGLSYVLALLLRKPA 161
           NDTLRTATLTLVLVAGLIVALSSIDAGLSYVLALLLRKPA
Sbjct: 121 NDTLRTATLTLVLVAGLIVALSSIDAGLSYVLALLLRKPA 160
[Close]
BLAST of Spo03987.1 vs. NCBI nr
Match: gi|902203878|gb|KNA14718.1| (hypothetical protein SOVF_105000 [Spinacia oleracea])

HSP 1 Score: 292.0 bits (746), Expect = 6.500e-76
Identity = 145/160 (90.62%), Postives = 150/160 (93.75%), Query Frame = 1 

		  

Query: 1   MATFSGLSSNSSVLGYNNGNPMLSFRYRMSIEANTRGLVTCKFVPKWDLRSEIHYSHKKQ 60
           MATFSG+ SNSSVLGYNNGNPMLSFR RMSIEANT GLVTCKFVPKWDLR+EIHYSHKKQ
Sbjct: 1   MATFSGMLSNSSVLGYNNGNPMLSFRNRMSIEANTGGLVTCKFVPKWDLRAEIHYSHKKQ 60

Query: 61  VQPRFSMSRGGNYGLKFDDECAEDPFWLRFSKETIRGLKSLVRFLVQQPGQLKYIEWPSF 120
           V+PRFSMSRGG YGLKFDDEC +DPFWL FSKETIRGLKSLV FLV QPGQLKYIEWPSF
Sbjct: 61  VRPRFSMSRGGKYGLKFDDECDDDPFWLHFSKETIRGLKSLVAFLVHQPGQLKYIEWPSF 120

Query: 121 NDTLRTATLTLVLVAGLIVALSSIDAGLSYVLALLLRKPA 161
            DTLRTATLTLVLVAGLIVALSSIDA LSYVLALLL+KPA
Sbjct: 121 KDTLRTATLTLVLVAGLIVALSSIDAALSYVLALLLQKPA 160
[Close]
BLAST of Spo03987.1 vs. NCBI nr
Match: gi|731357645|ref|XP_010690322.1| (PREDICTED: uncharacterized protein LOC104903888 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 222.6 bits (566), Expect = 4.800e-55
Identity = 114/160 (71.25%), Postives = 130/160 (81.25%), Query Frame = 1 

		  

Query: 1   MATFSGLSSNSSVLGYNNGNPMLSFRYRMSIEANTRGLVTCKFVPKWDLRSEIHYSHKKQ 60
           MAT SGL SNSSVL   N NPMLSF Y MS EA T GL+T KFVPKW  R +I     + 
Sbjct: 62  MATVSGLLSNSSVLSLKNDNPMLSFGYSMSTEATTTGLITVKFVPKWKSRCKIRSLRMEW 121

Query: 61  VQPRFSMSRGGNYGLKFDDECAEDPFWLRFSKETIRGLKSLVRFLVQQPGQLKYIEWPSF 120
           V+P F+MSRGG+YGLKFD+E  EDPFW+ +SKETIRGLK+L+ FLVQQPGQLKYIEWPSF
Sbjct: 122 VRPLFAMSRGGSYGLKFDNEDDEDPFWVHYSKETIRGLKTLLAFLVQQPGQLKYIEWPSF 181

Query: 121 NDTLRTATLTLVLVAGLIVALSSIDAGLSYVLALLLRKPA 161
            DTL TA+LTLVLVA LIVALSS+D+ LS+VLALL+RKPA
Sbjct: 182 QDTLWTASLTLVLVAALIVALSSLDSALSFVLALLVRKPA 221
[Close]
BLAST of Spo03987.1 vs. NCBI nr
Match: gi|870849088|gb|KMT01351.1| (hypothetical protein BVRB_9g213650 isoform B [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 222.6 bits (566), Expect = 4.800e-55
Identity = 114/160 (71.25%), Postives = 130/160 (81.25%), Query Frame = 1 

		  

Query: 1   MATFSGLSSNSSVLGYNNGNPMLSFRYRMSIEANTRGLVTCKFVPKWDLRSEIHYSHKKQ 60
           MAT SGL SNSSVL   N NPMLSF Y MS EA T GL+T KFVPKW  R +I     + 
Sbjct: 1   MATVSGLLSNSSVLSLKNDNPMLSFGYSMSTEATTTGLITVKFVPKWKSRCKIRSLRMEW 60

Query: 61  VQPRFSMSRGGNYGLKFDDECAEDPFWLRFSKETIRGLKSLVRFLVQQPGQLKYIEWPSF 120
           V+P F+MSRGG+YGLKFD+E  EDPFW+ +SKETIRGLK+L+ FLVQQPGQLKYIEWPSF
Sbjct: 61  VRPLFAMSRGGSYGLKFDNEDDEDPFWVHYSKETIRGLKTLLAFLVQQPGQLKYIEWPSF 120

Query: 121 NDTLRTATLTLVLVAGLIVALSSIDAGLSYVLALLLRKPA 161
            DTL TA+LTLVLVA LIVALSS+D+ LS+VLALL+RKPA
Sbjct: 121 QDTLWTASLTLVLVAALIVALSSLDSALSFVLALLVRKPA 160
[Close]
BLAST of Spo03987.1 vs. NCBI nr
Match: gi|731357643|ref|XP_010690320.1| (PREDICTED: uncharacterized protein LOC104903888 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 222.6 bits (566), Expect = 4.800e-55
Identity = 114/160 (71.25%), Postives = 130/160 (81.25%), Query Frame = 1 

		  

Query: 1   MATFSGLSSNSSVLGYNNGNPMLSFRYRMSIEANTRGLVTCKFVPKWDLRSEIHYSHKKQ 60
           MAT SGL SNSSVL   N NPMLSF Y MS EA T GL+T KFVPKW  R +I     + 
Sbjct: 70  MATVSGLLSNSSVLSLKNDNPMLSFGYSMSTEATTTGLITVKFVPKWKSRCKIRSLRMEW 129

Query: 61  VQPRFSMSRGGNYGLKFDDECAEDPFWLRFSKETIRGLKSLVRFLVQQPGQLKYIEWPSF 120
           V+P F+MSRGG+YGLKFD+E  EDPFW+ +SKETIRGLK+L+ FLVQQPGQLKYIEWPSF
Sbjct: 130 VRPLFAMSRGGSYGLKFDNEDDEDPFWVHYSKETIRGLKTLLAFLVQQPGQLKYIEWPSF 189

Query: 121 NDTLRTATLTLVLVAGLIVALSSIDAGLSYVLALLLRKPA 161
            DTL TA+LTLVLVA LIVALSS+D+ LS+VLALL+RKPA
Sbjct: 190 QDTLWTASLTLVLVAALIVALSSLDSALSFVLALLVRKPA 229
[Close]
BLAST of Spo03987.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RQX4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_044480 PE=3 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 4.100e-85
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 1 

		  

Query: 1   MATFSGLSSNSSVLGYNNGNPMLSFRYRMSIEANTRGLVTCKFVPKWDLRSEIHYSHKKQ 60
           MATFSGLSSNSSVLGYNNGNPMLSFRYRMSIEANTRGLVTCKFVPKWDLRSEIHYSHKKQ
Sbjct: 1   MATFSGLSSNSSVLGYNNGNPMLSFRYRMSIEANTRGLVTCKFVPKWDLRSEIHYSHKKQ 60

Query: 61  VQPRFSMSRGGNYGLKFDDECAEDPFWLRFSKETIRGLKSLVRFLVQQPGQLKYIEWPSF 120
           VQPRFSMSRGGNYGLKFDDECAEDPFWLRFSKETIRGLKSLVRFLVQQPGQLKYIEWPSF
Sbjct: 61  VQPRFSMSRGGNYGLKFDDECAEDPFWLRFSKETIRGLKSLVRFLVQQPGQLKYIEWPSF 120

Query: 121 NDTLRTATLTLVLVAGLIVALSSIDAGLSYVLALLLRKPA 161
           NDTLRTATLTLVLVAGLIVALSSIDAGLSYVLALLLRKPA
Sbjct: 121 NDTLRTATLTLVLVAGLIVALSSIDAGLSYVLALLLRKPA 160
[Close]
BLAST of Spo03987.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R5D4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_105000 PE=3 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 4.500e-76
Identity = 145/160 (90.62%), Postives = 150/160 (93.75%), Query Frame = 1 

		  

Query: 1   MATFSGLSSNSSVLGYNNGNPMLSFRYRMSIEANTRGLVTCKFVPKWDLRSEIHYSHKKQ 60
           MATFSG+ SNSSVLGYNNGNPMLSFR RMSIEANT GLVTCKFVPKWDLR+EIHYSHKKQ
Sbjct: 1   MATFSGMLSNSSVLGYNNGNPMLSFRNRMSIEANTGGLVTCKFVPKWDLRAEIHYSHKKQ 60

Query: 61  VQPRFSMSRGGNYGLKFDDECAEDPFWLRFSKETIRGLKSLVRFLVQQPGQLKYIEWPSF 120
           V+PRFSMSRGG YGLKFDDEC +DPFWL FSKETIRGLKSLV FLV QPGQLKYIEWPSF
Sbjct: 61  VRPRFSMSRGGKYGLKFDDECDDDPFWLHFSKETIRGLKSLVAFLVHQPGQLKYIEWPSF 120

Query: 121 NDTLRTATLTLVLVAGLIVALSSIDAGLSYVLALLLRKPA 161
            DTLRTATLTLVLVAGLIVALSSIDA LSYVLALLL+KPA
Sbjct: 121 KDTLRTATLTLVLVAGLIVALSSIDAALSYVLALLLQKPA 160
[Close]
BLAST of Spo03987.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EEG3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g213650 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 3.400e-55
Identity = 114/160 (71.25%), Postives = 130/160 (81.25%), Query Frame = 1 

		  

Query: 1   MATFSGLSSNSSVLGYNNGNPMLSFRYRMSIEANTRGLVTCKFVPKWDLRSEIHYSHKKQ 60
           MAT SGL SNSSVL   N NPMLSF Y MS EA T GL+T KFVPKW  R +I     + 
Sbjct: 1   MATVSGLLSNSSVLSLKNDNPMLSFGYSMSTEATTTGLITVKFVPKWKSRCKIRSLRMEW 60

Query: 61  VQPRFSMSRGGNYGLKFDDECAEDPFWLRFSKETIRGLKSLVRFLVQQPGQLKYIEWPSF 120
           V+P F+MSRGG+YGLKFD+E  EDPFW+ +SKETIRGLK+L+ FLVQQPGQLKYIEWPSF
Sbjct: 61  VRPLFAMSRGGSYGLKFDNEDDEDPFWVHYSKETIRGLKTLLAFLVQQPGQLKYIEWPSF 120

Query: 121 NDTLRTATLTLVLVAGLIVALSSIDAGLSYVLALLLRKPA 161
            DTL TA+LTLVLVA LIVALSS+D+ LS+VLALL+RKPA
Sbjct: 121 QDTLWTASLTLVLVAALIVALSSLDSALSFVLALLVRKPA 160
[Close]
BLAST of Spo03987.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BIT5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g213650 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 3.400e-55
Identity = 114/160 (71.25%), Postives = 130/160 (81.25%), Query Frame = 1 

		  

Query: 1   MATFSGLSSNSSVLGYNNGNPMLSFRYRMSIEANTRGLVTCKFVPKWDLRSEIHYSHKKQ 60
           MAT SGL SNSSVL   N NPMLSF Y MS EA T GL+T KFVPKW  R +I     + 
Sbjct: 70  MATVSGLLSNSSVLSLKNDNPMLSFGYSMSTEATTTGLITVKFVPKWKSRCKIRSLRMEW 129

Query: 61  VQPRFSMSRGGNYGLKFDDECAEDPFWLRFSKETIRGLKSLVRFLVQQPGQLKYIEWPSF 120
           V+P F+MSRGG+YGLKFD+E  EDPFW+ +SKETIRGLK+L+ FLVQQPGQLKYIEWPSF
Sbjct: 130 VRPLFAMSRGGSYGLKFDNEDDEDPFWVHYSKETIRGLKTLLAFLVQQPGQLKYIEWPSF 189

Query: 121 NDTLRTATLTLVLVAGLIVALSSIDAGLSYVLALLLRKPA 161
            DTL TA+LTLVLVA LIVALSS+D+ LS+VLALL+RKPA
Sbjct: 190 QDTLWTASLTLVLVAALIVALSSLDSALSFVLALLVRKPA 229
[Close]
BLAST of Spo03987.1 vs. UniProtKB/TrEMBL
Match: A0A061DZS8_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_006567 PE=3 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 4.700e-25
Identity = 65/102 (63.73%), Postives = 78/102 (76.47%), Query Frame = 1 

		  

Query: 58  KKQVQPRFSMSRGGN-YGLKFDDECAEDPFWLRFSKETIRGLKSLVRFLVQQPGQLKYIE 117
           +K    R  MS G N + L FDDE  E+PFWL   +++I G++SL  FLV+QPGQLKYIE
Sbjct: 54  RKPYMSRHVMSVGSNRHQLSFDDELPEEPFWLSLIRDSIWGVRSLFAFLVEQPGQLKYIE 113

Query: 118 WPSFNDTLRTATLTLVLVAGLIVALSSIDAGLSYVLALLLRK 159
           WPSF  TL+TATLTLVLVA LIVALSS+D+ L YVLALLLR+
Sbjct: 114 WPSFQSTLKTATLTLVLVAMLIVALSSVDSVLCYVLALLLRR 155
[Close]
BLAST of Spo03987.1 vs. TAIR (Arabidopsis)
Match: AT4G38490.1 (unknown protein)

HSP 1 Score: 92.4 bits (228), Expect = 2.700e-19
Identity = 44/76 (57.89%), Postives = 58/76 (76.32%), Query Frame = 1 

		  

Query: 83  EDPFWLRFSKETIRGLKSLVRFLVQQPGQLKYIEWPSFNDTLRTATLTLVLVAGLIVALS 142
           E+P WL   ++ +   +SL+ F+ +QP QLKYIEWP+F  TL+TATL+L LVA  IVALS
Sbjct: 76  EEPLWLSLLRDMVWSTRSLLSFMAEQPSQLKYIEWPTFASTLKTATLSLCLVAVFIVALS 135

Query: 143 SIDAGLSYVLALLLRK 159
           S+DA L Y+LAL+LRK
Sbjct: 136 SVDAALCYILALILRK 151
The following BLAST results are available for this feature:
BLAST of Spo03987.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902228858|gb|KNA21289.1|5.8e-85100.hypothetical protein SOVF_0444... [more]
gi|902203878|gb|KNA14718.1|6.5e-7690.6hypothetical protein SOVF_1050... [more]
gi|731357645|ref|XP_010690322.1|4.8e-5571.2PREDICTED: uncharacterized pro... [more]
gi|870849088|gb|KMT01351.1|4.8e-5571.2hypothetical protein BVRB_9g21... [more]
gi|731357643|ref|XP_010690320.1|4.8e-5571.2PREDICTED: uncharacterized pro... [more]
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BLAST of Spo03987.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RQX4_SPIOL4.1e-85100.Uncharacterized protein OS=Spi... [more]
A0A0K9R5D4_SPIOL4.5e-7690.6Uncharacterized protein OS=Spi... [more]
A0A0J8EEG3_BETVU3.4e-5571.2Uncharacterized protein OS=Bet... [more]
A0A0J8BIT5_BETVU3.4e-5571.2Uncharacterized protein OS=Bet... [more]
A0A061DZS8_THECC4.7e-2563.7Uncharacterized protein isofor... [more]
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BLAST of Spo03987.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo03987.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT4G38490.12.7e-1957.8unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001901Protein translocase complex, SecE/Sec61-gamma subunitPFAMPF00584SecEcoord: 104..155
score: 1.
IPR022943Preprotein translocase subunit SecEHAMAPMF_00422SecEcoord: 99..154
score: 1
NoneNo IPR availableGENE3D1.20.5.1030coord: 99..156
score: 4.
NoneNo IPR availablePANTHERPTHR37247FAMILY NOT NAMEDcoord: 69..160
score: 3.2
NoneNo IPR availablePANTHERPTHR37247:SF1SUBFAMILY NOT NAMEDcoord: 69..160
score: 3.2

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006605 protein targeting
biological_process GO:0006886 intracellular protein transport
cellular_component GO:0016020 membrane
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo001650.66Barchart | Table
Spo146550.66Barchart | Table