Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAACTCTGAATTCCATATCTTTGTATAGAAAGATTAAGAAGAAAACAATGACATGCAATCCTCTTTCTCTTTTCACTCTATTTTCGGAGGATGGCCCGTCTACTATGAAATGGTATGGTAGGTTACTTTCAGTCCTTCACCATACAACCAAAATTATTTCTTTTTCTTATGCGGATGTAACTTGTGAAGCCGTGTTTAATAACTTTAGTTAATTGAAAACTTTAATTGTTTTAAAATAGTGACATGTTCAGGATTTTACGAATGGGTGTCATTGTCGTCCACAAAACTTATACCATCAATAACCAATGCATGAATAAAAAAATAAACAACCAAAGGAAATCCAATATAAACAATCGACCAAAACAGCTAAATGTCGTCCAACAACCGACATCCGACATCCATTAACTTGTGAAGCCGTGTTTAAGAATTTTTGTTAATTGAAACCTTAAATTGTTTTAAAGTAGTGACATATCCAGGATTTCACAAATTGGTGTCATCGACGTCCACAAACCTTGTACTATCAATAACAAATGCATGATTAAAAACAATAAACAACCAACGGAATTCCAATACAAACAATCGATCAAACCAACTAAATGCCACCCAACAACCGACATCCAACATCCAACGTCCAATAGCCAAATGAAGCCATTATAATTGTTTATCTTTTCTCAATTTGAAACGTATATTTGTCAAAACGTCTGCTTGTATTTTTAAAGTATTTACTCCATACTCCAAAATCCAAACTAACAATATTTATGTGTTGACAATCAGTATTTTGGGACGTGGTTGTTATTGATTTATCCTAATTCCTTATTGGATTCTTCAAGGCCCAACAATCCGGGTCACGAGTATAAGCGCATATCCGAATATTCAGATCATGACCCAGTTCCACCTCAAAAGGTCTTACCATTTTTTAGTGATGATTCTAGAAACCCAGAATATCAATCAAAACATCCAGAACAATCCAGAACACAGAATCTCACTCTCACTCTTTCTCTCTCCTCTCGCCCTTATGTTCTCCGCGTCCTTTGCAAGAAGCAACAACAAGCCAATTCGGTAATTCGCGACACTTTGGTGAAAATTAGGCACAAATCATTAATCAATTTGTAAACTTTAATTTCCCGAAGGGATCCCAGGTTAGGGTTTTGTTACTTCTCATTTTTAGTGTTCTTTGACAATTAATGAACTGTAACTTTTTGTTATTGTGATTTATTGGTTATTTTTACATGATTTTTCATGTTTTTTTTAATGATTTTAGATGTAATTGTAATGTTTTTATGAACTTAGGTTTGAATTTGCAATTTTTCAAGTAAGCTAGAATGTTCTAGAGAAGTAGCTCGCACATTGATTGGAACTCGATTAAAATTGATACTGTGAATTTAAGTTGAAATGGGTGTGTTTTATCATGCAAATTTAAGTTTTTGATCAAGTATCGTGGACCTTTTTAGTTTTTGCTTATCGGCAAACTTCAATTTTTATTTTTTTGTTGAAATTGGCTATGAACTTTATGAATTTAAACTGGTGTTATAAGTGCATAAGCAAATAAATCTGGAGTCTTTCGATTACTTTCGTAAAATCTGAAATTGAAGCATTAAATTTGATTAGTATATGATAGTCTTACTTTGAATACTGCAGAATTATGCTAGTTTTGGTTAGGATGTAGCTTGAAGGATAGCAAAATTTTGTGGTTAGGTCGTCATTTTCGTCTGTTGCTGTCCCGGTTTGTCGTCTTGCTTTAGTCTTAGGATGGATCATAACTTGAGAAAGGACTGGAAATTGATTCAAAGTGCAATCGAAAATTAAACTTGGAAAAAATGTGGTTGTTGGATGGTTAGCACATAGTTCTTGCTAGTTTGTAGTCAACCGATTTTCAGATTATGTTAAATAAGCTTGTTGGTTAATTTTATATGCTCTGAAAGGGCATAAACAGTAAACCTTGTTATTAAAAGACTAAATGTTGGCTGTGTAGTTTTCTGATTAGTACTGAGCTGAATTCGTAAACCAGTGACCTTTTGTCATAATCATCAAACAACGCGAGCAAAAGCTACTTAAACAATCTGAAATGTTGGAAAATATTGCATCAAACCTAGCTGCTTCTAAGATACTCTGTAAAACATGTTTTCAGTAATAATAGATTAATAGGGATCCTTAATTTCTATTGTTTACTCCACTCTTTTGTAGATAGAAGAAAGAAAGCTGATAAATATGTTTGGGGTAGTATTCCCAAATCGAAGCTTCCCACTTGACATCTCTACCTTTACCCAAATTGACACATTTCATTGGGTTCTCGATATGAACCACTTTGTCGGTATGTCTCTCTCTTCTTTCCTTCAACCCCTCTGCTATTTCTTTTATGCAGCGTATTTCATACTTATATTATTCATATTGTTCAGCTCAATTACTATATAACAATTGCAGGTGAAGCATATGATCAAGTCAAAGATATGTGTATTTTCTTACTCAACAATTTCACCCTTCCAGCAGACAAAGCCCTAGCAGTTTATGTACAATCACCCGGGTCACCCTTTGTGTACTGTGGTGCCGTCACAGTAGCTCGTCCATCTGCTGTTCTCTCTCTCCTCTGGCCGGAGCCTGGAAGCGAAGGCCAATTCCTTACAGCTGATGCTTCCCCTCTTTCTGCTAAGATTGGGGTGTCTGTTCAAGACGTGTCGTCGCTCCCGTCTCTTGATATCGCTGCAGATAAGAAGATTGAGCACACCGCCCTCAAAGTTGGGGAGAATCTCTTTAATTTCATGCAGTCATTTTGCGGCGTTGATGGTAGTAAATTGATTGTGCCCATGGATATCTTGGATCGGTGGTTTAAGAAGTTCCAGGAGCGTGCTAAGCGTGATCCTGATTACTTGAAGGGTTTTACCTTGTAG ATGGAAACTCTGAATTCCATATCTTTGTATAGAAAGATTAAGAAGAAAACAATGACATGCAATCCTCTTTCTCTTTTCACTCTATTTTCGGAGGATGGCCCGTCTACTATGAAATGGCCCAACAATCCGGGTCACGAGTATAAGCGCATATCCGAATATTCAGATCATGACCCAGTTCCACCTCAAAAGGTCTTACCATTTTTTAGTGATGATTCTAGAAACCCAGAATATCAATCAAAACATCCAGAACAATCCAGAACACAGAATCTCACTCTCACTCTTTCTCTCTCCTCTCGCCCTTATGTTCTCCGCGTCCTTTGCAAGAAGCAACAACAAGCCAATTCGGGATCCCAGATAGAAGAAAGAAAGCTGATAAATATGTTTGGGGTAGTATTCCCAAATCGAAGCTTCCCACTTGACATCTCTACCTTTACCCAAATTGACACATTTCATTGGGTTCTCGATATGAACCACTTTGTCGGTGAAGCATATGATCAAGTCAAAGATATGTGTATTTTCTTACTCAACAATTTCACCCTTCCAGCAGACAAAGCCCTAGCAGTTTATGTACAATCACCCGGGTCACCCTTTGTGTACTGTGGTGCCGTCACAGTAGCTCGTCCATCTGCTGTTCTCTCTCTCCTCTGGCCGGAGCCTGGAAGCGAAGGCCAATTCCTTACAGCTGATGCTTCCCCTCTTTCTGCTAAGATTGGGGTGTCTGTTCAAGACGTGTCGTCGCTCCCGTCTCTTGATATCGCTGCAGATAAGAAGATTGAGCACACCGCCCTCAAAGTTGGGGAGAATCTCTTTAATTTCATGCAGTCATTTTGCGGCGTTGATGGTAGTAAATTGATTGTGCCCATGGATATCTTGGATCGGTGGTTTAAGAAGTTCCAGGAGCGTGCTAAGCGTGATCCTGATTACTTGAAGGGTTTTACCTTGTAG ATGGAAACTCTGAATTCCATATCTTTGTATAGAAAGATTAAGAAGAAAACAATGACATGCAATCCTCTTTCTCTTTTCACTCTATTTTCGGAGGATGGCCCGTCTACTATGAAATGGCCCAACAATCCGGGTCACGAGTATAAGCGCATATCCGAATATTCAGATCATGACCCAGTTCCACCTCAAAAGGTCTTACCATTTTTTAGTGATGATTCTAGAAACCCAGAATATCAATCAAAACATCCAGAACAATCCAGAACACAGAATCTCACTCTCACTCTTTCTCTCTCCTCTCGCCCTTATGTTCTCCGCGTCCTTTGCAAGAAGCAACAACAAGCCAATTCGGGATCCCAGATAGAAGAAAGAAAGCTGATAAATATGTTTGGGGTAGTATTCCCAAATCGAAGCTTCCCACTTGACATCTCTACCTTTACCCAAATTGACACATTTCATTGGGTTCTCGATATGAACCACTTTGTCGGTGAAGCATATGATCAAGTCAAAGATATGTGTATTTTCTTACTCAACAATTTCACCCTTCCAGCAGACAAAGCCCTAGCAGTTTATGTACAATCACCCGGGTCACCCTTTGTGTACTGTGGTGCCGTCACAGTAGCTCGTCCATCTGCTGTTCTCTCTCTCCTCTGGCCGGAGCCTGGAAGCGAAGGCCAATTCCTTACAGCTGATGCTTCCCCTCTTTCTGCTAAGATTGGGGTGTCTGTTCAAGACGTGTCGTCGCTCCCGTCTCTTGATATCGCTGCAGATAAGAAGATTGAGCACACCGCCCTCAAAGTTGGGGAGAATCTCTTTAATTTCATGCAGTCATTTTGCGGCGTTGATGGTAGTAAATTGATTGTGCCCATGGATATCTTGGATCGGTGGTTTAAGAAGTTCCAGGAGCGTGCTAAGCGTGATCCTGATTACTTGAAGGGTTTTACCTTGTAG METLNSISLYRKIKKKTMTCNPLSLFTLFSEDGPSTMKWPNNPGHEYKRISEYSDHDPVPPQKVLPFFSDDSRNPEYQSKHPEQSRTQNLTLTLSLSSRPYVLRVLCKKQQQANSGSQIEERKLINMFGVVFPNRSFPLDISTFTQIDTFHWVLDMNHFVGEAYDQVKDMCIFLLNNFTLPADKALAVYVQSPGSPFVYCGAVTVARPSAVLSLLWPEPGSEGQFLTADASPLSAKIGVSVQDVSSLPSLDIAADKKIEHTALKVGENLFNFMQSFCGVDGSKLIVPMDILDRWFKKFQERAKRDPDYLKGFTL Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo04029.1 vs. NCBI nr
Match: gi|902236434|gb|KNA24378.1| (hypothetical protein SOVF_016120 [Spinacia oleracea]) HSP 1 Score: 388.3 bits (996), Expect = 1.300e-104 Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 1
BLAST of Spo04029.1 vs. NCBI nr
Match: gi|731317859|ref|XP_010669406.1| (PREDICTED: protein OPI10 homolog [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 364.8 bits (935), Expect = 1.500e-97 Identity = 175/189 (92.59%), Postives = 184/189 (97.35%), Query Frame = 1
BLAST of Spo04029.1 vs. NCBI nr
Match: gi|568882543|ref|XP_006494083.1| (PREDICTED: protein OPI10 homolog [Citrus sinensis]) HSP 1 Score: 337.8 bits (865), Expect = 2.000e-89 Identity = 157/188 (83.51%), Postives = 174/188 (92.55%), Query Frame = 1
BLAST of Spo04029.1 vs. NCBI nr
Match: gi|950988745|ref|XP_014504021.1| (PREDICTED: protein OPI10 homolog [Vigna radiata var. radiata]) HSP 1 Score: 336.3 bits (861), Expect = 5.900e-89 Identity = 159/189 (84.13%), Postives = 176/189 (93.12%), Query Frame = 1
BLAST of Spo04029.1 vs. NCBI nr
Match: gi|1021043531|gb|KZN01312.1| (hypothetical protein DCAR_010066 [Daucus carota subsp. sativus]) HSP 1 Score: 336.3 bits (861), Expect = 5.900e-89 Identity = 157/188 (83.51%), Postives = 173/188 (92.02%), Query Frame = 1
BLAST of Spo04029.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RY42_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_016120 PE=4 SV=1) HSP 1 Score: 388.3 bits (996), Expect = 9.100e-105 Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 1
BLAST of Spo04029.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D1B5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g034680 PE=4 SV=1) HSP 1 Score: 364.8 bits (935), Expect = 1.100e-97 Identity = 175/189 (92.59%), Postives = 184/189 (97.35%), Query Frame = 1
BLAST of Spo04029.1 vs. UniProtKB/TrEMBL
Match: A0A067DSC7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g041772mg PE=4 SV=1) HSP 1 Score: 337.8 bits (865), Expect = 1.400e-89 Identity = 157/188 (83.51%), Postives = 174/188 (92.55%), Query Frame = 1
BLAST of Spo04029.1 vs. UniProtKB/TrEMBL
Match: A0A166AIR6_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_010066 PE=4 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 4.100e-89 Identity = 157/188 (83.51%), Postives = 173/188 (92.02%), Query Frame = 1
BLAST of Spo04029.1 vs. UniProtKB/TrEMBL
Match: V4SBJ6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005984mg PE=4 SV=1) HSP 1 Score: 335.5 bits (859), Expect = 7.000e-89 Identity = 156/188 (82.98%), Postives = 173/188 (92.02%), Query Frame = 1
BLAST of Spo04029.1 vs. ExPASy Swiss-Prot
Match: OPI10_SCHPO (Protein OPI10 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC21H7.06c PE=3 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 2.500e-7 Identity = 40/171 (23.39%), Postives = 77/171 (45.03%), Query Frame = 1
BLAST of Spo04029.1 vs. ExPASy Swiss-Prot
Match: OPI10_DROME (Protein OPI10 homolog OS=Drosophila melanogaster GN=CG13926 PE=3 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 3.600e-6 Identity = 48/207 (23.19%), Postives = 88/207 (42.51%), Query Frame = 1
BLAST of Spo04029.1 vs. ExPASy Swiss-Prot
Match: OPI10_AEDAE (Protein OPI10 homolog OS=Aedes aegypti GN=AAEL010953 PE=3 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 4.800e-6 Identity = 53/206 (25.73%), Postives = 89/206 (43.20%), Query Frame = 1
BLAST of Spo04029.1 vs. TAIR (Arabidopsis)
Match: AT1G66080.1 (unknown protein) HSP 1 Score: 323.6 bits (828), Expect = 1.400e-88 Identity = 153/190 (80.53%), Postives = 170/190 (89.47%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo04029.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo04029.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo04029.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 3
BLAST of Spo04029.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
|