Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTCTAAAAGGACATTTGGAATGCTCAAAGTAAAGTATCAGTCACTAGTGTTCTACAATCGGCCTATGAAAAGGTTCCTTTTCTCCACAACCTTCATCAAAAAGTTTGATACCAAACCAATGCAAGAGTTCTATCTTCCAAGAGCTCATACTACAAATTTGTATTGTTTTATTTTAATTTGTTTTGTACTACTAAGAGTTAGTAAAGGTTATTTTTAGTAGTCTGTGTTGTTTAATCGTAGTTTATGATCCTTGTGGTTATGTTGTTTTAGATTTTGGTTATTGTTGTACTCCGTAAGTTGAACTTATGTACAAAAATAAATAAAATATGACTATGAGCATTTTAAGAGTTTATCTCTCATGTGGCACAATCCAAGCAAAGGCCCCTTTTAATTTATAACAACTCCTTCCATTTTTTAGGTTAGTCCTATCTAAGACAATCCAATATAAGTACATTTGTCATATACAGAGTATATGTTAATAGAATCTAACACATTTGTATATAGGAGATAAATAATTAAGGGATTTAATGGGGATAAAGGTTTATTTGGGAGTAAATAAGTGAGCTATTTTTGTGTGCTCTACTACGAGGAGTTCCCACCGCCTTCTGCAAGTCGACTAATCTTTCGTAGGAGTTTGCATGTGTACCTCGATAGACAACATCCCTCCCAAATAATGTTTTTTCCATACCTAAGTCTCGAACGTGAAACTTTGGTTAAGGAGCAAGAGGCGCTTAACCACTCATGTCAACCCAGTCGGTTAACAAGCAAGCTATTTAGATATTATAAACATCGTGTCTCCTGTGTGACTGGCTACACCATCAACTTGATGGTGTGACGTGCGTGCACAACTCACTCACGCGCATCTACTATTGAAAATGTTATTGACTGTTGTTACTTATACATTGTATTCGCTGTTACTTTTCTTGTTTTACTACAATGTCTTCAATTTCATGTTAGAGGATTTTTGTATAGATTGGTGTTACTTGACTTTTATGCTGGTGGTACTTACACATTGTATTCTCTGTTATTTTTCCTGTTTTATTGCAGTTTCATGTTAGAGGTTTCTTGTATAGACTGGTGTTACTTGACTTCCTATGTTGGTGTTACTTATACATTAAATGTTAGTTTTCTTGTTTTATTGCAGTTTCTTCAATCTCATGTTAGGTGTTACTTGACTTTTTATGCTGGTGTTACTTTTAATTATTGCAGTTTCATCAAATTCATTTTAGAGATTCCTTGTATAGATTGGTGTTACTTGACTTTTTATGCTGGTGTTACTTTTAGTTATTGCAGTTTCATCAAATTCATTTTAGAGATTCCTTGTATAGATTGGTGTTACTTGACTTTTTATGTTGGTGTTACTTTTACATTGTATTCGTTGATACTTTTTTTGTTTTATTGCAGCTTCATTTTAGAGGTTCATTGTATAGACATGTGCTACTCTATTTTTTATGCTGGTGTTACTTTTAGATTTCGTTAACCAATGCGTTAGGCTTATTATAAGTGTGAACATGTCACACCATCAAGTTGGTGGTGTGACTGGTCACATATAAGACTTGAGGTATTATAAAATATATAATAAGGATAAATATTGGACAAATAGAGAAGGATTCCAAAACAGACTAACATATAAAAGAACAACCAAATAGAAAAACAAGACTAATATTCAAAAACGAATAGTACTACATTAATTTTGAACGCGTGATTTTTTGGGTTAGACATAATATTAACGCATTCAATGTAATATCATATCTTATTTTCCAGTTTTCTTACTTACAACTTACAACTTACAACTTACAAGTCCCTTTTTAGCTAATTTTCATTTCAAATACATATATTTTTTTTCTTCTAGTTTTGTACTTAACATTTACCTTTGTCGAAATAGTTTCCCCTCGTTAGGAAAAATGAAGAACACATAACATTTTAGATCAGCACTCAAATTATTCATATTTTACTTAAACCTAAATTAATTTTAACATAATTTTTCACAGGTTTTACTACCATACTCGCTCTATTTCTAGTAAGTGTATCACTTGTCTTGTATGATTATTTCTAAATAAGCGCATCACTTCTAAGTTTGATAATATTATATACTTTGTAATTTTTTCTATTTGCAGTACTCTCCGCTACCATATATAGTCCGCCATTTCTCGTAATATTTGTTGTTTCTTTCTCCTTCGCTAGTTGAGTAGTTGTCTTATTAATTGTTTATTTATCTTATATACCACGACCCATTTCCTAAGCAACTTACAAAAAATATACGTAATAATATGCATGATCTAATAGTTAAATAAATGCCACATGATCTTATGAAGCACAAATTACACTTAAAACCTTATCTTCGATTTATTAACAAATACTCCGTACTTCGTACTCAATAGTTGATAAAAAAAAAAAATTCATACTTCAATCAATTTTTCCCTGTTTTACTTTTTCATCCCCCACCCTTCCTCCCTCCTTTTCTATTCACTCTTTCCCCACCAAACAAAAGTTTATAAGTAACAAAGAAAAAAAAGTATCTATAACAACAAAAATAATTGAACTTTCAACCCACTCCACTTCACTCCATTTTCCCCCATCTCCTCATTTCCATTTTCTCTCTCCCATTTAGACCACAATCTCTCTCTTTCTCTCTCTAAACAAAAAAAAAGTAGTGTTAAAGACAAAAGAGAAAAGAAAAGAAAAGAAAAGAAAAGACCATGTTTGAAGAAGCAATCTCTTTACTCTCAATTTGGGCCTCCATGAATAGTTGGTTAACCCCAACCGTCCTCTTCCTCCTCCTCAACCTCATGATTGGCACTATCGCCGTCACCTCCGGCTTCACCTCTCACAAACCCTCCCATCACCACCACCTCAACCACCCTGATACCACTTTCCACCACCACCTCAACCAACACCAACCACCACAACAACAATTCCAACCTCAATTAACTCGCGCTCCTTCCGTCTTGCAACGCCTTAAATCTATCAATCTTTACACTTTCTACTCTCACCCTCCCACCACCCACCTTCAACAACCACCACCACCACCTCAACAACAACAACAGCCTGAAATCCACAACCACCAACCCAACTCCCCCACCCCCATTTCCAGTGTCGCTTCCGACAACGTCTCCGACGAAGATTGCGAAAACCCCACTTTGGACGAAATCTACAGCCGTATTAAGCACGAAAACTCAATTTCTCACTACGGCCGTCAAAATTCCGACACCAAACCATCTGGCGGCGAAATCCCGGTAAAACTTCCTAAGAAGATGAAGAAATCTGCTAGTGATAAATCCGCCTTCAATCACTTTCACATCGAAGAAGAAGAAGCTGATAATGCTGGTGGTAGTGTTGATAGTCCTCTAAATCACACTGCAGTGCCGACGGTGGTGGAGGAGGTTGAAGAAGAAGAGAGAGAAAATGCGTTTACAGTGAGAGAAGATCAAGATGATGGTGTTGATGCAAAAGCTGATGATTTTATCAACAGATTCAAGAAACAGCTACAAATGCAGAGGGCTGATTCCATTGTTAAGTATAAAGATATGATTTCTAGAACTTCTGCTCAGTAA ATGTCTTCTAAAAGGACATTTGGAATGCTCAAAGTAAAGTATCAGTCACTAGTGTTCTACAATCGGCCTATGAAAAGACAAAAGAGAAAAGAAAAGAAAAGAAAAGAAAAGACCATGTTTGAAGAAGCAATCTCTTTACTCTCAATTTGGGCCTCCATGAATAGTTGGTTAACCCCAACCGTCCTCTTCCTCCTCCTCAACCTCATGATTGGCACTATCGCCGTCACCTCCGGCTTCACCTCTCACAAACCCTCCCATCACCACCACCTCAACCACCCTGATACCACTTTCCACCACCACCTCAACCAACACCAACCACCACAACAACAATTCCAACCTCAATTAACTCGCGCTCCTTCCGTCTTGCAACGCCTTAAATCTATCAATCTTTACACTTTCTACTCTCACCCTCCCACCACCCACCTTCAACAACCACCACCACCACCTCAACAACAACAACAGCCTGAAATCCACAACCACCAACCCAACTCCCCCACCCCCATTTCCAGTGTCGCTTCCGACAACGTCTCCGACGAAGATTGCGAAAACCCCACTTTGGACGAAATCTACAGCCGTATTAAGCACGAAAACTCAATTTCTCACTACGGCCGTCAAAATTCCGACACCAAACCATCTGGCGGCGAAATCCCGGTAAAACTTCCTAAGAAGATGAAGAAATCTGCTAGTGATAAATCCGCCTTCAATCACTTTCACATCGAAGAAGAAGAAGCTGATAATGCTGGTGGTAGTGTTGATAGTCCTCTAAATCACACTGCAGTGCCGACGGTGGTGGAGGAGGTTGAAGAAGAAGAGAGAGAAAATGCGTTTACAGTGAGAGAAGATCAAGATGATGGTGTTGATGCAAAAGCTGATGATTTTATCAACAGATTCAAGAAACAGCTACAAATGCAGAGGGCTGATTCCATTGTTAAGTATAAAGATATGATTTCTAGAACTTCTGCTCAGTAA ATGTCTTCTAAAAGGACATTTGGAATGCTCAAAGTAAAGTATCAGTCACTAGTGTTCTACAATCGGCCTATGAAAAGACAAAAGAGAAAAGAAAAGAAAAGAAAAGAAAAGACCATGTTTGAAGAAGCAATCTCTTTACTCTCAATTTGGGCCTCCATGAATAGTTGGTTAACCCCAACCGTCCTCTTCCTCCTCCTCAACCTCATGATTGGCACTATCGCCGTCACCTCCGGCTTCACCTCTCACAAACCCTCCCATCACCACCACCTCAACCACCCTGATACCACTTTCCACCACCACCTCAACCAACACCAACCACCACAACAACAATTCCAACCTCAATTAACTCGCGCTCCTTCCGTCTTGCAACGCCTTAAATCTATCAATCTTTACACTTTCTACTCTCACCCTCCCACCACCCACCTTCAACAACCACCACCACCACCTCAACAACAACAACAGCCTGAAATCCACAACCACCAACCCAACTCCCCCACCCCCATTTCCAGTGTCGCTTCCGACAACGTCTCCGACGAAGATTGCGAAAACCCCACTTTGGACGAAATCTACAGCCGTATTAAGCACGAAAACTCAATTTCTCACTACGGCCGTCAAAATTCCGACACCAAACCATCTGGCGGCGAAATCCCGGTAAAACTTCCTAAGAAGATGAAGAAATCTGCTAGTGATAAATCCGCCTTCAATCACTTTCACATCGAAGAAGAAGAAGCTGATAATGCTGGTGGTAGTGTTGATAGTCCTCTAAATCACACTGCAGTGCCGACGGTGGTGGAGGAGGTTGAAGAAGAAGAGAGAGAAAATGCGTTTACAGTGAGAGAAGATCAAGATGATGGTGTTGATGCAAAAGCTGATGATTTTATCAACAGATTCAAGAAACAGCTACAAATGCAGAGGGCTGATTCCATTGTTAAGTATAAAGATATGATTTCTAGAACTTCTGCTCAGTAA MSSKRTFGMLKVKYQSLVFYNRPMKRQKRKEKKRKEKTMFEEAISLLSIWASMNSWLTPTVLFLLLNLMIGTIAVTSGFTSHKPSHHHHLNHPDTTFHHHLNQHQPPQQQFQPQLTRAPSVLQRLKSINLYTFYSHPPTTHLQQPPPPPQQQQQPEIHNHQPNSPTPISSVASDNVSDEDCENPTLDEIYSRIKHENSISHYGRQNSDTKPSGGEIPVKLPKKMKKSASDKSAFNHFHIEEEEADNAGGSVDSPLNHTAVPTVVEEVEEEERENAFTVREDQDDGVDAKADDFINRFKKQLQMQRADSIVKYKDMISRTSAQ Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo04035.1 vs. NCBI nr
Match: gi|902236436|gb|KNA24380.1| (hypothetical protein SOVF_016140 [Spinacia oleracea]) HSP 1 Score: 554.3 bits (1427), Expect = 1.400e-154 Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 1
BLAST of Spo04035.1 vs. NCBI nr
Match: gi|731375464|ref|XP_010667262.1| (PREDICTED: uncharacterized protein LOC104884324 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 272.3 bits (695), Expect = 1.100e-69 Identity = 179/305 (58.69%), Postives = 198/305 (64.92%), Query Frame = 1
BLAST of Spo04035.1 vs. NCBI nr
Match: gi|731385013|ref|XP_010648354.1| (PREDICTED: uncharacterized protein LOC100249297 [Vitis vinifera]) HSP 1 Score: 179.5 bits (454), Expect = 9.400e-42 Identity = 129/302 (42.72%), Postives = 162/302 (53.64%), Query Frame = 1
BLAST of Spo04035.1 vs. NCBI nr
Match: gi|720019520|ref|XP_010262112.1| (PREDICTED: uncharacterized protein LOC104600711 [Nelumbo nucifera]) HSP 1 Score: 167.9 bits (424), Expect = 2.800e-38 Identity = 133/289 (46.02%), Postives = 157/289 (54.33%), Query Frame = 1
BLAST of Spo04035.1 vs. NCBI nr
Match: gi|1021050350|gb|KZN08128.1| (hypothetical protein DCAR_000797 [Daucus carota subsp. sativus]) HSP 1 Score: 163.7 bits (413), Expect = 5.400e-37 Identity = 120/299 (40.13%), Postives = 166/299 (55.52%), Query Frame = 1
BLAST of Spo04035.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RXV8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_016140 PE=4 SV=1) HSP 1 Score: 554.3 bits (1427), Expect = 9.800e-155 Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 1
BLAST of Spo04035.1 vs. UniProtKB/TrEMBL
Match: A0A0J8DXD8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_007660 PE=4 SV=1) HSP 1 Score: 272.3 bits (695), Expect = 7.400e-70 Identity = 179/305 (58.69%), Postives = 198/305 (64.92%), Query Frame = 1
BLAST of Spo04035.1 vs. UniProtKB/TrEMBL
Match: A0A166FSR0_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_000797 PE=4 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 3.700e-37 Identity = 120/299 (40.13%), Postives = 166/299 (55.52%), Query Frame = 1
BLAST of Spo04035.1 vs. UniProtKB/TrEMBL
Match: A5BPX0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004233 PE=4 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 7.000e-36 Identity = 119/288 (41.32%), Postives = 149/288 (51.74%), Query Frame = 1
BLAST of Spo04035.1 vs. UniProtKB/TrEMBL
Match: A0A078CSZ7_BRANA (BnaA09g34630D protein OS=Brassica napus GN=BnaA09g34630D PE=4 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 2.500e-33 Identity = 118/302 (39.07%), Postives = 160/302 (52.98%), Query Frame = 1
BLAST of Spo04035.1 vs. TAIR (Arabidopsis)
Match: AT2G26110.1 (Protein of unknown function (DUF761)) HSP 1 Score: 122.5 bits (306), Expect = 4.800e-28 Identity = 101/247 (40.89%), Postives = 136/247 (55.06%), Query Frame = 1
BLAST of Spo04035.1 vs. TAIR (Arabidopsis)
Match: AT4G26130.1 (unknown protein) HSP 1 Score: 72.0 bits (175), Expect = 7.500e-13 Identity = 88/314 (28.03%), Postives = 135/314 (42.99%), Query Frame = 1
BLAST of Spo04035.1 vs. TAIR (Arabidopsis)
Match: AT5G56980.1 (unknown protein) HSP 1 Score: 59.7 bits (143), Expect = 3.800e-9 Identity = 55/161 (34.16%), Postives = 79/161 (49.07%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo04035.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo04035.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo04035.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo04035.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 3
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
RNA-Seq Expression
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