Spo04068 (gene) | SpinachBase

Overview


Name	Spo04068
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	40S ribosomal protein S24
Location	SpoScf_00092 : 460134 .. 462455 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGCTCGGGTTAACTTTCGTTCTATGTTCAATAAATTACGCCTTTAAATTTTGGTAAAAAATAAATAAATAAACATAAACCCTAGCTAAGCAGCATTTCCCCCTTCCTTCTCTTTCCAGTCGCGAATCCTCTGAACTTCAAGCAGCAGTAGCTCTAATTCCCTGCTGAGAGGAGAGAGAGATAACAATGGCGGACAAGGCAGTTACTATCAGGACCCGCAAGTTTATGACCAACCGTCTTCTTTCCCGGAAGCAATTCGTGAGTTTTATAATCATATCTCCAATTTGCTGTTTTTAGGGTTTAATCATATGTTTGACGTTTGTTTTGAATTTGTTTCAGGTAATTGATGTTCTTCATCCTGGTCGCGCTAACGTCTCTAAGGTCTCTTGAATAAATTTTTTTGCAAGTGTTGTTTTTTTGTAATGAAAATTTTCCGAATCTGTAAACTCTTCAATCCCAATTGCTTTTAATTTCTTGTGGTCTGCCTATCCATCTCTAATTAAGTATTTATATCTTTGATTTTTACTTCGATTAGAGTTAATGGAGGATATACATCTGTACATAACAAACAATTCCGGATCTACAATTTTTCAAATGGCTTACTAAACGAATAGTGGAATTCGCCGCTATATGCCTATGTGTTTGAGTAATCCTGTTCAATTTATTTCTAAGTGGAAGTTTCCATGAATCATGAACATCCCCACTGTAATATAGTAAGTTGCCTTGCTAAACCAATTTGTAATTTGTCTCTGGACTCCGTTGATGTGTTATACTGTGTACTTCATTTAGTAAATGTTTTGAATTACACTACATATTTTTAAATTTGATGATGGATATATGCCTGAGGTGGGTTTGTCATGGTCATATTCTAGAAACGGAAGAGATGTTTGATTTATAACAACTCTTGCTGATTTTATTGCTGTATATTTAGCTCTTTTTTAACAGATTCAATCACGGGCTCATGGTATTTCCACTTGTATCAGAAGGTTTACATGTCAACTATGTATGTTCAACTTGTTGGTAGAGTTTCTTTGTTATCATTGAAAATAACAAGTGTTCTTGTTTTGATTGTATTATATGATAAATCTTGTGTTTGCGTGGAAATCTAGAGTTTGTGCAACTCACTTTGTTACATGGGGTTTAAGCTGCAAACTTTTTTGCTGGTGGTTTCATATTCAGTGGCTGTGCTATGGTTTGTCCTTTTGCAGTGTTTCCTTTTTCTCAATATTCTGAGCTCTTTCCTGATTGTTTGCTTGTATACTTTTTGATGAACAAATTTCAAGTGTTTCCTGTCGTACCACCGATTGTTACTACTATTCTATTTCTCCCTTACAATCTTACAACTTAAATCTTTAATTTCTCTCATGAAGGCGGAATTGAAGGACAAACTAGCTAGCATATATGATGTGAAAGATCCAAATTCTATCTTTGTGTTCAAGTTCCGTACTCATTTTGGAGGAGGTAAATCAACTGGATTCGGATTGATTTATGATTCTGTTGATAGTGCAAAGAAGTTCGAACCCAAGTACAGGCTGATAAGGGTAAGTATGCTGTTCCATTTGTGATCTTTATACTTGAAATTCCATTTGTGGTGGCAGTAAATGAGTTGCCTGTTTTGAGTTGCTGAGTGATATTACCGCTCCTATTTTTGCTTGGTGCAGAATGGATTGGCTACCAAGATTGAGAAGTCCAGAAAACAAATGAAAGAAAGGAAGAACAGAGCTAAGAAGATCCGTGGTGTTAAGAAGGTAGGAGAATGGACTTGCATTGTTGTTTTGGCTGATGGCTGTGATTGTCTAACTCCGATATGAGCCAACGCTATCAAATGTGGCTGATACTCTTTTTTATTTAAGTCTTTGTAAATCCCTGGCTTCTAAACTTCTCTATTTTATGTTTCTTTAACTTTGTCACATTTATTTCTTTGGCAGACCAAGGCTGCTGAAGCTGGAAAGAAGAAATGAGGAAATGGTGATGTTGAAAATTTTGCTGTTCCCTTTTTGGCGCATCTTCATTTCCTACTGTCCTTGTCCTTGATCTTCTCCCTGTTTTTGTTACTTGTTTACTCTAATTAGTCATAGCAACTTTAGTGAAAGATTATGAGACATCGAGATTTTCAAATGTTGTAAAACTTCATTAAAGAGCTTTATTAAAATTTTGACTGGTAATGGGTTATCTTGACAATTATTCAAGGGGATTCCAAGTGCTAATAGATGAAGCGTAAAGGCTAATCAGAATGGGACTGAGTATTGACAGCATTGCCTCCTGTCCTTGCATGATGCACAGCATGTCAATTTTACCTCTTACAAAACTTAGTAATAGTAG

mRNA sequence

GAGCTCGGGTTAACTTTCGTTCTATGTTCAATAAATTACGCCTTTAAATTTTGGTAAAAAATAAATAAATAAACATAAACCCTAGCTAAGCAGCATTTCCCCCTTCCTTCTCTTTCCAGTCGCGAATCCTCTGAACTTCAAGCAGCAGTAGCTCTAATTCCCTGCTGAGAGGAGAGAGAGATAACAATGGCGGACAAGGCAGTTACTATCAGGACCCGCAAGTTTATGACCAACCGTCTTCTTTCCCGGAAGCAATTCGTAATTGATGTTCTTCATCCTGGTCGCGCTAACGTCTCTAAGGCGGAATTGAAGGACAAACTAGCTAGCATATATGATGTGAAAGATCCAAATTCTATCTTTGTGTTCAAGTTCCGTACTCATTTTGGAGGAGGTAAATCAACTGGATTCGGATTGATTTATGATTCTGTTGATAGTGCAAAGAAGTTCGAACCCAAGTACAGGCTGATAAGGAATGGATTGGCTACCAAGATTGAGAAGTCCAGAAAACAAATGAAAGAAAGGAAGAACAGAGCTAAGAAGATCCGTGGTGTTAAGAAGACCAAGGCTGCTGAAGCTGGAAAGAAGAAATGAGGAAATGGTGATGTTGAAAATTTTGCTGTTCCCTTTTTGGCGCATCTTCATTTCCTACTGTCCTTGTCCTTGATCTTCTCCCTGTTTTTGTTACTTGTTTACTCTAATTAGTCATAGCAACTTTAGTGAAAGATTATGAGACATCGAGATTTTCAAATGTTGTAAAACTTCATTAAAGAGCTTTATTAAAATTTTGACTGGTAATGGGTTATCTTGACAATTATTCAAGGGGATTCCAAGTGCTAATAGATGAAGCGTAAAGGCTAATCAGAATGGGACTGAGTATTGACAGCATTGCCTCCTGTCCTTGCATGATGCACAGCATGTCAATTTTACCTCTTACAAAACTTAGTAATAGTAG

Coding sequence (CDS)

ATGGCGGACAAGGCAGTTACTATCAGGACCCGCAAGTTTATGACCAACCGTCTTCTTTCCCGGAAGCAATTCGTAATTGATGTTCTTCATCCTGGTCGCGCTAACGTCTCTAAGGCGGAATTGAAGGACAAACTAGCTAGCATATATGATGTGAAAGATCCAAATTCTATCTTTGTGTTCAAGTTCCGTACTCATTTTGGAGGAGGTAAATCAACTGGATTCGGATTGATTTATGATTCTGTTGATAGTGCAAAGAAGTTCGAACCCAAGTACAGGCTGATAAGGAATGGATTGGCTACCAAGATTGAGAAGTCCAGAAAACAAATGAAAGAAAGGAAGAACAGAGCTAAGAAGATCCGTGGTGTTAAGAAGACCAAGGCTGCTGAAGCTGGAAAGAAGAAATGA

Protein sequence

MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKDKLASIYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLATKIEKSRKQMKERKNRAKKIRGVKKTKAAEAGKKK

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo04068.1	Spo04068.1	mRNA

Homology

[Close]

BLAST of Spo04068.1 vs. NCBI nr
Match: gi|902185865|gb|KNA10566.1| (hypothetical protein SOVF_143160 [Spinacia oleracea])

HSP 1 Score: 253.1 bits (645), Expect = 2.800e-64
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 1

		  
Query: 1   MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKDKLASIYDVKDPNSIFVF 60
           MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKDKLASIYDVKDPNSIFVF
Sbjct: 1   MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKDKLASIYDVKDPNSIFVF 60

Query: 61  KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLATKIEKSRKQMKERKNRAKKIR 120
           KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLATKIEKSRKQMKERKNRAKKIR
Sbjct: 61  KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLATKIEKSRKQMKERKNRAKKIR 120

Query: 121 GVKKTKAAEAGKKK 135
           GVKKTKAAEAGKKK
Sbjct: 121 GVKKTKAAEAGKKK 134

[Close]

BLAST of Spo04068.1 vs. NCBI nr
Match: gi|731355201|ref|XP_010689015.1| (PREDICTED: 40S ribosomal protein S24-1-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 242.7 bits (618), Expect = 3.800e-61
Identity = 127/134 (94.78%), Postives = 132/134 (98.51%), Query Frame = 1

		  
Query: 1   MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKDKLASIYDVKDPNSIFVF 60
           MADKAVT+RTRKFMTNRLLSRKQFVIDVLHPGRANVSK ELK+KLAS+YDVKD NSIFVF
Sbjct: 1   MADKAVTLRTRKFMTNRLLSRKQFVIDVLHPGRANVSKTELKEKLASMYDVKDTNSIFVF 60

Query: 61  KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLATKIEKSRKQMKERKNRAKKIR 120
           KFRTHFGGGKSTGFGLIYDSVDSAKK+EPKYRLIRNGLATKIEKSRKQMKERKNRAKKIR
Sbjct: 61  KFRTHFGGGKSTGFGLIYDSVDSAKKYEPKYRLIRNGLATKIEKSRKQMKERKNRAKKIR 120

Query: 121 GVKKTKAAEAGKKK 135
           GVKKTKAA+AGKKK
Sbjct: 121 GVKKTKAADAGKKK 134

[Close]

BLAST of Spo04068.1 vs. NCBI nr
Match: gi|567880979|ref|XP_006433048.1| (hypothetical protein CICLE_v10002819mg [Citrus clementina])

HSP 1 Score: 241.1 bits (614), Expect = 1.100e-60
Identity = 126/134 (94.03%), Postives = 131/134 (97.76%), Query Frame = 1

		  
Query: 1   MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKDKLASIYDVKDPNSIFVF 60
           MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELK+KLA +YDVKDPNSIFVF
Sbjct: 1   MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVF 60

Query: 61  KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLATKIEKSRKQMKERKNRAKKIR 120
           KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGL TK+EKSRKQMKERKNRAKKIR
Sbjct: 61  KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIR 120

Query: 121 GVKKTKAAEAGKKK 135
           GVKKTKA++A KKK
Sbjct: 121 GVKKTKASDAAKKK 134

[Close]

BLAST of Spo04068.1 vs. NCBI nr
Match: gi|566190013|ref|XP_002315773.2| (hypothetical protein POPTR_0010s09820g [Populus trichocarpa])

HSP 1 Score: 238.0 bits (606), Expect = 9.300e-60
Identity = 121/134 (90.30%), Postives = 132/134 (98.51%), Query Frame = 1

		  
Query: 1   MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKDKLASIYDVKDPNSIFVF 60
           M+DKAVTIRTRKFMTNRLLSRKQF+IDVLHPGRANVSKAELK+KLAS+Y+VKDPNSIFVF
Sbjct: 1   MSDKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRANVSKAELKEKLASLYEVKDPNSIFVF 60

Query: 61  KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLATKIEKSRKQMKERKNRAKKIR 120
           KFRTHFGGGKSTGFGLIYDSV+SAKK+EPKYRLIRNGLATK+EKSRKQ+KERKNRAKK+R
Sbjct: 61  KFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLATKVEKSRKQLKERKNRAKKVR 120

Query: 121 GVKKTKAAEAGKKK 135
           GVKKTKA +A KKK
Sbjct: 121 GVKKTKAGDAAKKK 134

[Close]

BLAST of Spo04068.1 vs. NCBI nr
Match: gi|902207101|gb|KNA15623.1| (hypothetical protein SOVF_096550 [Spinacia oleracea])

HSP 1 Score: 238.0 bits (606), Expect = 9.300e-60
Identity = 127/133 (95.49%), Postives = 129/133 (96.99%), Query Frame = 1

		  
Query: 1   MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKDKLASIYDVKDPNSIFVF 60
           MA+KAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELK+KLA IYDV D NSIFVF
Sbjct: 1   MAEKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARIYDVNDLNSIFVF 60

Query: 61  KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLATKIEKSRKQMKERKNRAKKIR 120
           KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLATKIEKSRKQMKERKNRAKKIR
Sbjct: 61  KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLATKIEKSRKQMKERKNRAKKIR 120

Query: 121 GVKKTKAAEAGKK 134
           GVKKTKAAEA KK
Sbjct: 121 GVKKTKAAEAKKK 133

[Close]

BLAST of Spo04068.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QVM4_SPIOL (40S ribosomal protein S24 OS=Spinacia oleracea GN=SOVF_143160 PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 1.900e-64
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 1

		  
Query: 1   MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKDKLASIYDVKDPNSIFVF 60
           MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKDKLASIYDVKDPNSIFVF
Sbjct: 1   MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKDKLASIYDVKDPNSIFVF 60

Query: 61  KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLATKIEKSRKQMKERKNRAKKIR 120
           KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLATKIEKSRKQMKERKNRAKKIR
Sbjct: 61  KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLATKIEKSRKQMKERKNRAKKIR 120

Query: 121 GVKKTKAAEAGKKK 135
           GVKKTKAAEAGKKK
Sbjct: 121 GVKKTKAAEAGKKK 134

[Close]

BLAST of Spo04068.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EHA4_BETVU (40S ribosomal protein S24 OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g204940 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 2.600e-61
Identity = 127/134 (94.78%), Postives = 132/134 (98.51%), Query Frame = 1

		  
Query: 1   MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKDKLASIYDVKDPNSIFVF 60
           MADKAVT+RTRKFMTNRLLSRKQFVIDVLHPGRANVSK ELK+KLAS+YDVKD NSIFVF
Sbjct: 1   MADKAVTLRTRKFMTNRLLSRKQFVIDVLHPGRANVSKTELKEKLASMYDVKDTNSIFVF 60

Query: 61  KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLATKIEKSRKQMKERKNRAKKIR 120
           KFRTHFGGGKSTGFGLIYDSVDSAKK+EPKYRLIRNGLATKIEKSRKQMKERKNRAKKIR
Sbjct: 61  KFRTHFGGGKSTGFGLIYDSVDSAKKYEPKYRLIRNGLATKIEKSRKQMKERKNRAKKIR 120

Query: 121 GVKKTKAAEAGKKK 135
           GVKKTKAA+AGKKK
Sbjct: 121 GVKKTKAADAGKKK 134

[Close]

BLAST of Spo04068.1 vs. UniProtKB/TrEMBL
Match: A0A067EHB1_CITSI (40S ribosomal protein S24 OS=Citrus sinensis GN=CISIN_1g032760mg PE=3 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 7.700e-61
Identity = 126/134 (94.03%), Postives = 131/134 (97.76%), Query Frame = 1

		  
Query: 1   MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKDKLASIYDVKDPNSIFVF 60
           MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELK+KLA +YDVKDPNSIFVF
Sbjct: 1   MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVF 60

Query: 61  KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLATKIEKSRKQMKERKNRAKKIR 120
           KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGL TK+EKSRKQMKERKNRAKKIR
Sbjct: 61  KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIR 120

Query: 121 GVKKTKAAEAGKKK 135
           GVKKTKA++A KKK
Sbjct: 121 GVKKTKASDAAKKK 134

[Close]

BLAST of Spo04068.1 vs. UniProtKB/TrEMBL
Match: V4SF69_9ROSI (40S ribosomal protein S24 OS=Citrus clementina GN=CICLE_v10002819mg PE=3 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 7.700e-61
Identity = 126/134 (94.03%), Postives = 131/134 (97.76%), Query Frame = 1

		  
Query: 1   MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKDKLASIYDVKDPNSIFVF 60
           MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELK+KLA +YDVKDPNSIFVF
Sbjct: 1   MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVF 60

Query: 61  KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLATKIEKSRKQMKERKNRAKKIR 120
           KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGL TK+EKSRKQMKERKNRAKKIR
Sbjct: 61  KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIR 120

Query: 121 GVKKTKAAEAGKKK 135
           GVKKTKA++A KKK
Sbjct: 121 GVKKTKASDAAKKK 134

[Close]

BLAST of Spo04068.1 vs. UniProtKB/TrEMBL
Match: A9PC05_POPTR (40S ribosomal protein S24 OS=Populus trichocarpa GN=POPTR_0010s09820g PE=2 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 6.500e-60
Identity = 121/134 (90.30%), Postives = 132/134 (98.51%), Query Frame = 1

		  
Query: 1   MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKDKLASIYDVKDPNSIFVF 60
           M+DKAVTIRTRKFMTNRLLSRKQF+IDVLHPGRANVSKAELK+KLAS+Y+VKDPNSIFVF
Sbjct: 1   MSDKAVTIRTRKFMTNRLLSRKQFIIDVLHPGRANVSKAELKEKLASLYEVKDPNSIFVF 60

Query: 61  KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLATKIEKSRKQMKERKNRAKKIR 120
           KFRTHFGGGKSTGFGLIYDSV+SAKK+EPKYRLIRNGLATK+EKSRKQ+KERKNRAKK+R
Sbjct: 61  KFRTHFGGGKSTGFGLIYDSVESAKKYEPKYRLIRNGLATKVEKSRKQLKERKNRAKKVR 120

Query: 121 GVKKTKAAEAGKKK 135
           GVKKTKA +A KKK
Sbjct: 121 GVKKTKAGDAAKKK 134

[Close]

BLAST of Spo04068.1 vs. ExPASy Swiss-Prot
Match: RS241_ARATH (40S ribosomal protein S24-1 OS=Arabidopsis thaliana GN=RPS24A PE=2 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 2.700e-59
Identity = 119/133 (89.47%), Postives = 129/133 (96.99%), Query Frame = 1

		  
Query: 1   MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKDKLASIYDVKDPNSIFVF 60
           MA+KAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELK+KLA +Y+VKDPN+IFVF
Sbjct: 1   MAEKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVF 60

Query: 61  KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLATKIEKSRKQMKERKNRAKKIR 120
           KFRTHFGGGKS+GFGLIYD+V+SAKKFEPKYRLIRNGL TKIEKSRKQ+KERKNRAKKIR
Sbjct: 61  KFRTHFGGGKSSGFGLIYDTVESAKKFEPKYRLIRNGLDTKIEKSRKQIKERKNRAKKIR 120

Query: 121 GVKKTKAAEAGKK 134
           GVKKTKA +A KK
Sbjct: 121 GVKKTKAGDAKKK 133

[Close]

BLAST of Spo04068.1 vs. ExPASy Swiss-Prot
Match: RS242_ARATH (40S ribosomal protein S24-2 OS=Arabidopsis thaliana GN=RPS24B PE=2 SV=2)

HSP 1 Score: 220.3 bits (560), Expect = 1.300e-56
Identity = 113/133 (84.96%), Postives = 126/133 (94.74%), Query Frame = 1

		  
Query: 1   MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKDKLASIYDVKDPNSIFVF 60
           MA+KAVTIRTR FMTNRLL+RKQFVIDVLHPGRANVSKAELK+KLA +Y+VKDPN+IF F
Sbjct: 1   MAEKAVTIRTRNFMTNRLLARKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFCF 60

Query: 61  KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLATKIEKSRKQMKERKNRAKKIR 120
           KFRTHFGGGKS+G+GLIYD+V++AKKFEPKYRLIRNGL TKIEKSRKQ+KERKNRAKKIR
Sbjct: 61  KFRTHFGGGKSSGYGLIYDTVENAKKFEPKYRLIRNGLDTKIEKSRKQIKERKNRAKKIR 120

Query: 121 GVKKTKAAEAGKK 134
           GVKKTKA +  KK
Sbjct: 121 GVKKTKAGDTKKK 133

[Close]

BLAST of Spo04068.1 vs. ExPASy Swiss-Prot
Match: RS24_SPOFR (40S ribosomal protein S24 OS=Spodoptera frugiperda GN=RpS24 PE=2 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.200e-38
Identity = 85/133 (63.91%), Postives = 103/133 (77.44%), Query Frame = 1

		  
Query: 1   MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKDKLASIYDVKDPNSIFVF 60
           M +   TIRTRKFMTNRLL+RKQ V DVLHPG+  VSK E+++KLA +Y V  P+ +FVF
Sbjct: 1   MTEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVT-PDVVFVF 60

Query: 61  KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLATKIEKSRKQMKERKNRAKKIR 120
            F+T+FGGGKSTGF LIYD++D AKKFEPK+RL R+GL  K   +RKQ KERKNR KK+R
Sbjct: 61  GFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVR 120

Query: 121 GVKKTKAAEAGKK 134
           G KK+K   A KK
Sbjct: 121 GTKKSKVGAAAKK 132

[Close]

BLAST of Spo04068.1 vs. ExPASy Swiss-Prot
Match: RS24_PONAB (40S ribosomal protein S24 OS=Pongo abelii GN=RPS24 PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 3.400e-38
Identity = 88/129 (68.22%), Postives = 101/129 (78.29%), Query Frame = 1

		  
Query: 6   VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKDKLASIYDVKDPNSIFVFKFRTH 65
           VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K E+++KLA +Y    P+ IFVF FRTH
Sbjct: 5   VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTH 64

Query: 66  FGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLATKIEKSRKQMKERKNRAKKIRGVKKT 125
           FGGGK+TGFG+IYDS+D AKK EPK+RL R+GL  K + SRKQ KERKNR KK+RG  K 
Sbjct: 65  FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAKA 124

Query: 126 KAAEAGKKK 135
               AGKKK
Sbjct: 125 NVG-AGKKK 131

[Close]

BLAST of Spo04068.1 vs. ExPASy Swiss-Prot
Match: RS24_BOVIN (40S ribosomal protein S24 OS=Bos taurus GN=RPS24 PE=2 SV=2)

HSP 1 Score: 159.1 bits (401), Expect = 3.400e-38
Identity = 88/129 (68.22%), Postives = 101/129 (78.29%), Query Frame = 1

		  
Query: 6   VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKDKLASIYDVKDPNSIFVFKFRTH 65
           VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K E+++KLA +Y    P+ IFVF FRTH
Sbjct: 5   VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTH 64

Query: 66  FGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLATKIEKSRKQMKERKNRAKKIRGVKKT 125
           FGGGK+TGFG+IYDS+D AKK EPK+RL R+GL  K + SRKQ KERKNR KK+RG  K 
Sbjct: 65  FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAKA 124

Query: 126 KAAEAGKKK 135
               AGKKK
Sbjct: 125 NVG-AGKKK 131

[Close]

BLAST of Spo04068.1 vs. TAIR (Arabidopsis)
Match: AT3G04920.1 (Ribosomal protein S24e family protein)

HSP 1 Score: 229.2 bits (583), Expect = 1.500e-60
Identity = 119/133 (89.47%), Postives = 129/133 (96.99%), Query Frame = 1

		  
Query: 1   MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKDKLASIYDVKDPNSIFVF 60
           MA+KAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELK+KLA +Y+VKDPN+IFVF
Sbjct: 1   MAEKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVF 60

Query: 61  KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLATKIEKSRKQMKERKNRAKKIR 120
           KFRTHFGGGKS+GFGLIYD+V+SAKKFEPKYRLIRNGL TKIEKSRKQ+KERKNRAKKIR
Sbjct: 61  KFRTHFGGGKSSGFGLIYDTVESAKKFEPKYRLIRNGLDTKIEKSRKQIKERKNRAKKIR 120

Query: 121 GVKKTKAAEAGKK 134
           GVKKTKA +A KK
Sbjct: 121 GVKKTKAGDAKKK 133

[Close]

BLAST of Spo04068.1 vs. TAIR (Arabidopsis)
Match: AT5G28060.1 (Ribosomal protein S24e family protein)

HSP 1 Score: 220.3 bits (560), Expect = 7.100e-58
Identity = 113/133 (84.96%), Postives = 126/133 (94.74%), Query Frame = 1

		  
Query: 1   MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKDKLASIYDVKDPNSIFVF 60
           MA+KAVTIRTR FMTNRLL+RKQFVIDVLHPGRANVSKAELK+KLA +Y+VKDPN+IF F
Sbjct: 1   MAEKAVTIRTRNFMTNRLLARKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFCF 60

Query: 61  KFRTHFGGGKSTGFGLIYDSVDSAKKFEPKYRLIRNGLATKIEKSRKQMKERKNRAKKIR 120
           KFRTHFGGGKS+G+GLIYD+V++AKKFEPKYRLIRNGL TKIEKSRKQ+KERKNRAKKIR
Sbjct: 61  KFRTHFGGGKSSGYGLIYDTVENAKKFEPKYRLIRNGLDTKIEKSRKQIKERKNRAKKIR 120

Query: 121 GVKKTKAAEAGKK 134
           GVKKTKA +  KK
Sbjct: 121 GVKKTKAGDTKKK 133

The following BLAST results are available for this feature:

BLAST of Spo04068.1 vs. NCBI nr
BLAST of Spo04068.1 vs. UniProtKB/TrEMBL
BLAST of Spo04068.1 vs. ExPASy Swiss-Prot
BLAST of Spo04068.1 vs. TAIR (Arabidopsis)

BLAST of Spo04068.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902185865\|gb\|KNA10566.1\|	2.8e-64	100.	hypothetical protein SOVF_1431...	[more]
gi\|731355201\|ref\|XP_010689015.1\|	3.8e-61	94.7	PREDICTED: 40S ribosomal prote...	[more]
gi\|567880979\|ref\|XP_006433048.1\|	1.1e-60	94.0	hypothetical protein CICLE_v10...	[more]
gi\|566190013\|ref\|XP_002315773.2\|	9.3e-60	90.3	hypothetical protein POPTR_001...	[more]
gi\|902207101\|gb\|KNA15623.1\|	9.3e-60	95.4	hypothetical protein SOVF_0965...	[more]

BLAST of Spo04068.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9QVM4_SPIOL	1.9e-64	100.	40S ribosomal protein S24 OS=S...	[more]
A0A0J8EHA4_BETVU	2.6e-61	94.7	40S ribosomal protein S24 OS=B...	[more]
A0A067EHB1_CITSI	7.7e-61	94.0	40S ribosomal protein S24 OS=C...	[more]
V4SF69_9ROSI	7.7e-61	94.0	40S ribosomal protein S24 OS=C...	[more]
A9PC05_POPTR	6.5e-60	90.3	40S ribosomal protein S24 OS=P...	[more]

BLAST of Spo04068.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
RS241_ARATH	2.7e-59	89.4	40S ribosomal protein S24-1 OS...	[more]
RS242_ARATH	1.3e-56	84.9	40S ribosomal protein S24-2 OS...	[more]
RS24_SPOFR	1.2e-38	63.9	40S ribosomal protein S24 OS=S...	[more]
RS24_PONAB	3.4e-38	68.2	40S ribosomal protein S24 OS=P...	[more]
RS24_BOVIN	3.4e-38	68.2	40S ribosomal protein S24 OS=B...	[more]

BLAST of Spo04068.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT3G04920.1	1.5e-60	89.4	Ribosomal protein S24e family ...	[more]
AT5G28060.1	7.1e-58	84.9	Ribosomal protein S24e family ...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001976	Ribosomal protein S24e	PRODOM	PD006052		coord: 14..86 score: 4.0
IPR001976	Ribosomal protein S24e	HAMAP	MF_00545	Ribosomal_S24e	coord: 4..106 score: 19
IPR001976	Ribosomal protein S24e	PANTHER	PTHR10496	40S RIBOSOMAL PROTEIN S24	coord: 1..134 score: 8.8E
IPR001976	Ribosomal protein S24e	PFAM	PF01282	Ribosomal_S24e	coord: 25..103 score: 4.1
IPR012677	Nucleotide-binding alpha-beta plait domain	GENE3D	3.30.70.330		coord: 6..108 score: 6.5
IPR012678	Ribosomal protein L23/L15e core domain	unknown	SSF54189	Ribosomal proteins S24e, L23 and L15e	coord: 6..108 score: 6.04
IPR018098	Ribosomal S24e conserved site	PROSITE	PS00529	RIBOSOMAL_S24E	coord: 66..88 scor
None	No IPR available	unknown	Coil	Coil	coord: 99..119 scor

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0009073	aromatic amino acid family biosynthetic process
biological_process	GO:0009220	pyrimidine ribonucleotide biosynthetic process
biological_process	GO:0006396	RNA processing
biological_process	GO:0010564	regulation of cell cycle process
biological_process	GO:0006626	protein targeting to mitochondrion
biological_process	GO:0048825	cotyledon development
biological_process	GO:0051301	cell division
biological_process	GO:0015994	chlorophyll metabolic process
biological_process	GO:0007010	cytoskeleton organization
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0006425	glutaminyl-tRNA aminoacylation
biological_process	GO:0006424	glutamyl-tRNA aminoacylation
biological_process	GO:0010498	proteasomal protein catabolic process
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0010051	xylem and phloem pattern formation
biological_process	GO:0010091	trichome branching
biological_process	GO:0032880	regulation of protein localization
biological_process	GO:0072583	clathrin-dependent endocytosis
biological_process	GO:0009920	cell plate formation involved in plant-type cell wall biogenesis
biological_process	GO:0009553	embryo sac development
biological_process	GO:0006334	nucleosome assembly
biological_process	GO:0006397	mRNA processing
biological_process	GO:0051083	'de novo' cotranslational protein folding
biological_process	GO:0043488	regulation of mRNA stability
biological_process	GO:0001510	RNA methylation
biological_process	GO:0009657	plastid organization
biological_process	GO:0098655	cation transmembrane transport
biological_process	GO:0006177	GMP biosynthetic process
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0048608	reproductive structure development
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0006354	DNA-templated transcription, elongation
biological_process	GO:0006260	DNA replication
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0009165	nucleotide biosynthetic process
biological_process	GO:0006446	regulation of translational initiation
biological_process	GO:0001731	formation of translation preinitiation complex
biological_process	GO:0008618	7-methylguanosine metabolic process
biological_process	GO:0006400	tRNA modification
biological_process	GO:0006522	alanine metabolic process
biological_process	GO:0006529	asparagine biosynthetic process
biological_process	GO:0022414	reproductive process
biological_process	GO:0000373	Group II intron splicing
biological_process	GO:0009791	post-embryonic development
biological_process	GO:0034968	histone lysine methylation
biological_process	GO:0031047	gene silencing by RNA
biological_process	GO:0032776	DNA methylation on cytosine
biological_process	GO:0006261	DNA-dependent DNA replication
biological_process	GO:0006342	chromatin silencing
biological_process	GO:0007049	cell cycle
biological_process	GO:0000741	karyogamy
biological_process	GO:0006531	aspartate metabolic process
biological_process	GO:0006536	glutamate metabolic process
biological_process	GO:0006541	glutamine metabolic process
biological_process	GO:0006412	translation
biological_process	GO:0009409	response to cold
biological_process	GO:0006449	regulation of translational termination
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
biological_process	GO:0016233	telomere capping
biological_process	GO:0010182	sugar mediated signaling pathway
biological_process	GO:0009845	seed germination
biological_process	GO:0010162	seed dormancy process
biological_process	GO:0050826	response to freezing
biological_process	GO:0007346	regulation of mitotic cell cycle
biological_process	GO:0009909	regulation of flower development
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006606	protein import into nucleus
biological_process	GO:0010267	production of ta-siRNAs involved in RNA interference
biological_process	GO:0035196	production of miRNAs involved in gene silencing by miRNA
biological_process	GO:0009640	photomorphogenesis
biological_process	GO:0006312	mitotic recombination
biological_process	GO:0009616	virus induced gene silencing
biological_process	GO:0000226	microtubule cytoskeleton organization
biological_process	GO:0009933	meristem structural organization
biological_process	GO:0051321	meiotic cell cycle
biological_process	GO:0019915	lipid storage
biological_process	GO:0009560	embryo sac egg cell differentiation
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0006302	double-strand break repair
biological_process	GO:0000911	cytokinesis by cell plate formation
biological_process	GO:0007267	cell-cell signaling
biological_process	GO:0000466	maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0009987	cellular process
biological_process	GO:0034969	histone arginine methylation
biological_process	GO:0019430	removal of superoxide radicals
biological_process	GO:0010048	vernalization response
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0045036	protein targeting to chloroplast
biological_process	GO:0000478	endonucleolytic cleavage involved in rRNA processing
biological_process	GO:0071702	organic substance transport
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0033036	macromolecule localization
biological_process	GO:0008152	metabolic process
biological_process	GO:0006333	chromatin assembly or disassembly
biological_process	GO:0006399	tRNA metabolic process
biological_process	GO:0010103	stomatal complex morphogenesis
biological_process	GO:0006364	rRNA processing
biological_process	GO:0009186	deoxyribonucleoside diphosphate metabolic process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0009263	deoxyribonucleotide biosynthetic process
biological_process	GO:0009561	megagametogenesis
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0009202	deoxyribonucleoside triphosphate biosynthetic process
biological_process	GO:0042793	plastid transcription
biological_process	GO:0006655	phosphatidylglycerol biosynthetic process
biological_process	GO:0009658	chloroplast organization
cellular_component	GO:0018444	translation release factor complex
cellular_component	GO:0030687	preribosome, large subunit precursor
cellular_component	GO:0016020	membrane
cellular_component	GO:0005654	nucleoplasm
cellular_component	GO:0042644	chloroplast nucleoid
cellular_component	GO:0005759	mitochondrial matrix
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0042575	DNA polymerase complex
cellular_component	GO:0005971	ribonucleoside-diphosphate reductase complex
cellular_component	GO:0009332	glutamate-tRNA ligase complex
cellular_component	GO:0005768	endosome
cellular_component	GO:0015030	Cajal body
cellular_component	GO:0016363	nuclear matrix
cellular_component	GO:0005802	trans-Golgi network
cellular_component	GO:0019013	viral nucleocapsid
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005618	cell wall
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009536	plastid
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009524	phragmoplast
cellular_component	GO:0005874	microtubule
cellular_component	GO:0009504	cell plate
cellular_component	GO:0005732	small nucleolar ribonucleoprotein complex
cellular_component	GO:0034457	Mpp10 complex
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0009295	nucleoid
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009508	plastid chromosome
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0030870	Mre11 complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0000781	chromosome, telomeric region
cellular_component	GO:0031981	nuclear lumen
cellular_component	GO:0005840	ribosome
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0005634	nucleus
cellular_component	GO:0031410	cytoplasmic vesicle
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0000785	chromatin
cellular_component	GO:0005852	eukaryotic translation initiation factor 3 complex
cellular_component	GO:0033290	eukaryotic 48S preinitiation complex
cellular_component	GO:0016282	eukaryotic 43S preinitiation complex
cellular_component	GO:0032991	protein-containing complex
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0004518	nuclease activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004748	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
molecular_function	GO:0016887	ATPase activity
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0043021	ribonucleoprotein complex binding
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0008469	histone-arginine N-methyltransferase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0043424	protein histidine kinase binding
molecular_function	GO:0004784	superoxide dismutase activity
molecular_function	GO:0004066	asparagine synthase (glutamine-hydrolyzing) activity
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0030276	clathrin binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0016462	pyrophosphatase activity
molecular_function	GO:0003922	GMP synthase (glutamine-hydrolyzing) activity
molecular_function	GO:0004818	glutamate-tRNA ligase activity
molecular_function	GO:0004819	glutamine-tRNA ligase activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003697	single-stranded DNA binding
molecular_function	GO:0008324	cation transmembrane transporter activity
molecular_function	GO:0008026	ATP-dependent helicase activity
molecular_function	GO:0003747	translation release factor activity
molecular_function	GO:0008146	sulfotransferase activity
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0005488	binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo01236	0.86	Barchart \| Table
Spo20941	0.84	Barchart \| Table
Spo18393	0.83	Barchart \| Table
Spo12391	0.82	Barchart \| Table
Spo21646	0.82	Barchart \| Table
Spo08761	0.81	Barchart \| Table
Spo21619	0.80	Barchart \| Table
Spo22654	0.80	Barchart \| Table
Spo19761	0.80	Barchart \| Table
Spo20806	0.80	Barchart \| Table
Spo19756	0.80	Barchart \| Table
Spo14364	0.80	Barchart \| Table
Spo03059	0.79	Barchart \| Table
Spo22869	0.79	Barchart \| Table
Spo18598	0.79	Barchart \| Table
Spo12725	0.79	Barchart \| Table
Spo25615	0.79	Barchart \| Table
Spo10024	0.78	Barchart \| Table
Spo18446	0.78	Barchart \| Table
Spo15407	0.78	Barchart \| Table
Spo15363	0.78	Barchart \| Table
Spo04453	0.77	Barchart \| Table
Spo01171	0.77	Barchart \| Table
Spo14013	0.77	Barchart \| Table
Spo06172	0.77	Barchart \| Table
Spo06168	0.77	Barchart \| Table
Spo02181	0.77	Barchart \| Table
Spo02790	0.77	Barchart \| Table
Spo17539	0.77	Barchart \| Table
Spo23428	0.77	Barchart \| Table
Spo22809	0.76	Barchart \| Table
Spo22638	0.76	Barchart \| Table
Spo05210	0.76	Barchart \| Table
Spo03708	0.76	Barchart \| Table
Spo07071	0.76	Barchart \| Table
Spo06455	0.76	Barchart \| Table
Spo25510	0.76	Barchart \| Table
Spo08105	0.76	Barchart \| Table
Spo09423	0.76	Barchart \| Table
Spo15797	0.76	Barchart \| Table
Spo27104	0.76	Barchart \| Table
Spo01997	0.76	Barchart \| Table
Spo00504	0.76	Barchart \| Table
Spo12809	0.76	Barchart \| Table
Spo15334	0.75	Barchart \| Table
Spo20614	0.75	Barchart \| Table
Spo06137	0.75	Barchart \| Table
Spo16563	0.75	Barchart \| Table
Spo16773	0.75	Barchart \| Table
Spo01001	0.75	Barchart \| Table
Spo08451	0.75	Barchart \| Table
Spo23513	0.75	Barchart \| Table
Spo05137	0.75	Barchart \| Table
Spo05360	0.75	Barchart \| Table
Spo23931	0.75	Barchart \| Table
Spo08968	0.75	Barchart \| Table
Spo23898	0.75	Barchart \| Table
Spo00759	0.74	Barchart \| Table
Spo20295	0.74	Barchart \| Table
Spo08502	0.74	Barchart \| Table
Spo01130	0.74	Barchart \| Table
Spo12764	0.74	Barchart \| Table
Spo16710	0.74	Barchart \| Table
Spo13630	0.74	Barchart \| Table
Spo11093	0.74	Barchart \| Table
Spo23465	0.74	Barchart \| Table
Spo05190	0.74	Barchart \| Table
Spo09493	0.74	Barchart \| Table
Spo06591	0.74	Barchart \| Table
Spo18479	0.74	Barchart \| Table
Spo13048	0.73	Barchart \| Table
Spo03835	0.73	Barchart \| Table
Spo09959	0.73	Barchart \| Table
Spo17114	0.73	Barchart \| Table
Spo23933	0.73	Barchart \| Table
Spo05555	0.73	Barchart \| Table
Spo22520	0.73	Barchart \| Table
Spo03053	0.73	Barchart \| Table
Spo05732	0.73	Barchart \| Table
Spo21910	0.73	Barchart \| Table
Spo12874	0.73	Barchart \| Table
Spo00391	0.73	Barchart \| Table
Spo16394	0.73	Barchart \| Table
Spo11870	0.73	Barchart \| Table
Spo24047	0.73	Barchart \| Table
Spo25328	0.73	Barchart \| Table
Spo14123	0.73	Barchart \| Table
Spo02163	0.73	Barchart \| Table
Spo02001	0.73	Barchart \| Table
Spo06287	0.73	Barchart \| Table
Spo25841	0.73	Barchart \| Table
Spo08285	0.73	Barchart \| Table
Spo18860	0.73	Barchart \| Table
Spo13204	0.73	Barchart \| Table
Spo04470	0.73	Barchart \| Table
Spo26452	0.73	Barchart \| Table
Spo06094	0.72	Barchart \| Table
Spo01200	0.72	Barchart \| Table
Spo25344	0.72	Barchart \| Table
Spo02189	0.72	Barchart \| Table
Spo24153	0.72	Barchart \| Table
Spo26680	0.72	Barchart \| Table
Spo23127	0.72	Barchart \| Table
Spo05075	0.72	Barchart \| Table
Spo22860	0.72	Barchart \| Table
Spo05337	0.72	Barchart \| Table
Spo00081	0.72	Barchart \| Table
Spo13856	0.72	Barchart \| Table
Spo19981	0.72	Barchart \| Table
Spo19401	0.72	Barchart \| Table
Spo09027	0.72	Barchart \| Table
Spo00554	0.72	Barchart \| Table
Spo09732	0.72	Barchart \| Table
Spo18304	0.72	Barchart \| Table
Spo16871	0.72	Barchart \| Table
Spo11756	0.72	Barchart \| Table
Spo25846	0.72	Barchart \| Table
Spo15759	0.72	Barchart \| Table
Spo18070	0.71	Barchart \| Table
Spo04323	0.71	Barchart \| Table
Spo16686	0.71	Barchart \| Table
Spo04262	0.71	Barchart \| Table
Spo09353	0.71	Barchart \| Table
Spo21613	0.71	Barchart \| Table
Spo00370	0.71	Barchart \| Table
Spo16410	0.71	Barchart \| Table
Spo14857	0.71	Barchart \| Table
Spo27100	0.71	Barchart \| Table
Spo05484	0.71	Barchart \| Table
Spo17081	0.71	Barchart \| Table
Spo07794	0.71	Barchart \| Table
Spo14310	0.71	Barchart \| Table
Spo19345	0.71	Barchart \| Table
Spo07697	0.71	Barchart \| Table
Spo15583	0.71	Barchart \| Table
Spo04531	0.71	Barchart \| Table
Spo14469	0.71	Barchart \| Table
Spo07065	0.71	Barchart \| Table
Spo12059	0.70	Barchart \| Table
Spo12073	0.70	Barchart \| Table
Spo02242	0.70	Barchart \| Table
Spo12196	0.70	Barchart \| Table
Spo26803	0.70	Barchart \| Table
Spo01096	0.70	Barchart \| Table
Spo00780	0.70	Barchart \| Table
Spo08335	0.70	Barchart \| Table
Spo19007	0.70	Barchart \| Table
Spo26632	0.70	Barchart \| Table
Spo08776	0.70	Barchart \| Table
Spo18942	0.70	Barchart \| Table
Spo18620	0.70	Barchart \| Table
Spo20376	0.70	Barchart \| Table
Spo20784	0.70	Barchart \| Table
Spo06635	0.70	Barchart \| Table
Spo14823	0.70	Barchart \| Table
Spo21648	0.70	Barchart \| Table
Spo22485	0.70	Barchart \| Table
Spo09563	0.70	Barchart \| Table
Spo09601	0.70	Barchart \| Table
Spo13835	0.70	Barchart \| Table
Spo18434	0.70	Barchart \| Table
Spo22525	0.70	Barchart \| Table
Spo17496	0.70	Barchart \| Table
Spo11072	0.70	Barchart \| Table
Spo23866	0.70	Barchart \| Table
Spo03589	0.70	Barchart \| Table
Spo23978	0.70	Barchart \| Table
Spo24939	0.70	Barchart \| Table
Spo02440	0.70	Barchart \| Table
Spo05885	0.69	Barchart \| Table
Spo01167	0.69	Barchart \| Table
Spo01615	0.69	Barchart \| Table
Spo01831	0.69	Barchart \| Table
Spo01970	0.69	Barchart \| Table
Spo03046	0.69	Barchart \| Table
Spo03627	0.69	Barchart \| Table
Spo04757	0.69	Barchart \| Table
Spo07677	0.69	Barchart \| Table
Spo09274	0.69	Barchart \| Table
Spo10705	0.69	Barchart \| Table
Spo13130	0.69	Barchart \| Table
Spo14367	0.69	Barchart \| Table
Spo15134	0.69	Barchart \| Table
Spo15431	0.69	Barchart \| Table
Spo15959	0.69	Barchart \| Table
Spo17367	0.69	Barchart \| Table
Spo17617	0.69	Barchart \| Table
Spo17695	0.69	Barchart \| Table
Spo18398	0.69	Barchart \| Table
Spo19207	0.69	Barchart \| Table
Spo20410	0.69	Barchart \| Table
Spo21531	0.69	Barchart \| Table
Spo22211	0.69	Barchart \| Table
Spo22804	0.69	Barchart \| Table
Spo25671	0.69	Barchart \| Table
Spo25672	0.69	Barchart \| Table
Spo25915	0.69	Barchart \| Table
Spo27152	0.69	Barchart \| Table
Spo12598	0.68	Barchart \| Table
Spo04350	0.68	Barchart \| Table
Spo03964	0.68	Barchart \| Table
Spo15620	0.68	Barchart \| Table
Spo17883	0.68	Barchart \| Table
Spo03413	0.68	Barchart \| Table
Spo15482	0.68	Barchart \| Table
Spo02912	0.68	Barchart \| Table
Spo25694	0.68	Barchart \| Table
Spo02472	0.68	Barchart \| Table
Spo11882	0.68	Barchart \| Table
Spo24703	0.68	Barchart \| Table
Spo00129	0.68	Barchart \| Table
Spo02214	0.68	Barchart \| Table
Spo14766	0.68	Barchart \| Table
Spo16782	0.68	Barchart \| Table
Spo08879	0.68	Barchart \| Table
Spo19499	0.68	Barchart \| Table
Spo07432	0.68	Barchart \| Table
Spo00170	0.68	Barchart \| Table
Spo15878	0.68	Barchart \| Table
Spo17124	0.68	Barchart \| Table
Spo14910	0.68	Barchart \| Table
Spo17219	0.68	Barchart \| Table
Spo20924	0.68	Barchart \| Table
Spo06581	0.68	Barchart \| Table
Spo21022	0.68	Barchart \| Table
Spo21404	0.68	Barchart \| Table
Spo05941	0.68	Barchart \| Table
Spo15841	0.68	Barchart \| Table
Spo27210	0.68	Barchart \| Table
Spo10889	0.68	Barchart \| Table
Spo10811	0.68	Barchart \| Table
Spo00702	0.68	Barchart \| Table
Spo22400	0.68	Barchart \| Table
Spo22475	0.68	Barchart \| Table
Spo05546	0.68	Barchart \| Table
Spo05318	0.68	Barchart \| Table
Spo00904	0.68	Barchart \| Table
Spo18258	0.68	Barchart \| Table
Spo05208	0.68	Barchart \| Table
Spo05182	0.68	Barchart \| Table
Spo23193	0.68	Barchart \| Table
Spo23227	0.68	Barchart \| Table
Spo23345	0.68	Barchart \| Table
Spo10624	0.67	Barchart \| Table
Spo06115	0.67	Barchart \| Table
Spo20889	0.67	Barchart \| Table
Spo08849	0.67	Barchart \| Table
Spo11596	0.67	Barchart \| Table
Spo05267	0.67	Barchart \| Table
Spo00501	0.67	Barchart \| Table
Spo19325	0.67	Barchart \| Table
Spo04669	0.67	Barchart \| Table
Spo12143	0.67	Barchart \| Table
Spo19388	0.67	Barchart \| Table
Spo07718	0.67	Barchart \| Table
Spo16568	0.67	Barchart \| Table
Spo04117	0.67	Barchart \| Table
Spo03972	0.67	Barchart \| Table
Spo10138	0.67	Barchart \| Table
Spo19500	0.67	Barchart \| Table
Spo23889	0.67	Barchart \| Table
Spo17017	0.67	Barchart \| Table
Spo07489	0.67	Barchart \| Table
Spo19776	0.67	Barchart \| Table
Spo16084	0.67	Barchart \| Table
Spo25913	0.67	Barchart \| Table
Spo22326	0.67	Barchart \| Table
Spo06997	0.67	Barchart \| Table
Spo16492	0.67	Barchart \| Table
Spo00689	0.67	Barchart \| Table
Spo18478	0.67	Barchart \| Table
Spo21196	0.67	Barchart \| Table
Spo02471	0.67	Barchart \| Table
Spo20626	0.67	Barchart \| Table
Spo25123	0.67	Barchart \| Table
Spo17638	0.67	Barchart \| Table
Spo26851	0.67	Barchart \| Table
Spo08980	0.67	Barchart \| Table
Spo16183	0.66	Barchart \| Table
Spo12071	0.66	Barchart \| Table
Spo12045	0.66	Barchart \| Table
Spo16973	0.66	Barchart \| Table
Spo25954	0.66	Barchart \| Table
Spo00525	0.66	Barchart \| Table
Spo09502	0.66	Barchart \| Table
Spo18449	0.66	Barchart \| Table
Spo08894	0.66	Barchart \| Table
Spo08625	0.66	Barchart \| Table
Spo07767	0.66	Barchart \| Table
Spo07535	0.66	Barchart \| Table
Spo07442	0.66	Barchart \| Table
Spo20161	0.66	Barchart \| Table
Spo06851	0.66	Barchart \| Table
Spo20772	0.66	Barchart \| Table
Spo06606	0.66	Barchart \| Table
Spo05870	0.66	Barchart \| Table
Spo05853	0.66	Barchart \| Table
Spo05782	0.66	Barchart \| Table
Spo26978	0.66	Barchart \| Table
Spo22456	0.66	Barchart \| Table
Spo05680	0.66	Barchart \| Table
Spo05607	0.66	Barchart \| Table
Spo05547	0.66	Barchart \| Table
Spo22605	0.66	Barchart \| Table
Spo00155	0.66	Barchart \| Table
Spo23624	0.66	Barchart \| Table
Spo03914	0.66	Barchart \| Table
Spo03846	0.66	Barchart \| Table
Spo02964	0.66	Barchart \| Table
Spo24415	0.66	Barchart \| Table
Spo24440	0.66	Barchart \| Table
Spo24498	0.66	Barchart \| Table
Spo01828	0.66	Barchart \| Table
Spo01241	0.66	Barchart \| Table
Spo01114	0.66	Barchart \| Table
Spo27144	0.66	Barchart \| Table
Spo13869	0.66	Barchart \| Table
Spo13731	0.66	Barchart \| Table
Spo13707	0.66	Barchart \| Table
Spo12994	0.66	Barchart \| Table
Spo06789	0.65	Barchart \| Table
Spo09201	0.65	Barchart \| Table
Spo25912	0.65	Barchart \| Table
Spo09738	0.65	Barchart \| Table
Spo15552	0.65	Barchart \| Table
Spo11418	0.65	Barchart \| Table
Spo15605	0.65	Barchart \| Table
Spo09882	0.65	Barchart \| Table
Spo11425	0.65	Barchart \| Table
Spo17065	0.65	Barchart \| Table
Spo25099	0.65	Barchart \| Table
Spo17288	0.65	Barchart \| Table
Spo24104	0.65	Barchart \| Table
Spo22732	0.65	Barchart \| Table
Spo22389	0.65	Barchart \| Table