Spo04086 (gene)

Overview
NameSpo04086
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionHigh mobility group B protein 6 (Nucleosome/chromatin assembly factor group D 06) (Nucleosome/chromatin assembly factor group D 6) (WRKY transcription factor 53) (AtWRKY53) (WRKY DNA-binding protein 53)
Locationchr5 : 26804098 .. 26805831 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAATGTGTTTTTTTTTTTGTCGTAATACACGACACTAAAAATGGTTTTACGGAAAAGACATCGTACCTAATCCCAAAAATTGGTACATAGCCGTTGCCCGCCCCCTCCCAATTCAAATTCAAATTCAAATTATGAAATTAACAACCACTTTTAAATAATTGGAGAATATAGCTCATCAGTCATCATCATCATCATCATCACCTCTATTTCTTTGACCATCTCCTCTCTTCAATCTCCCCTCTACAACTCCTAATCTCTCCCCTCATCCATCCTCAATGCTGGCCGCGGAACCCCCCACCGCATCTCCCCACTTCCGCCACCCAAAACCCGGTGGCCGAATACCTTTACAACCCAAAAACAACATTTTAATCAACAACACTTATGAACCCCCAAAATCAAACCCACCAAAAATAACTCACCAACTTCCCTTCCCATTATCACCGATCATCAGTGAATCTAATAAAGAGAATTATTGGGATCTCACTCCCAACAACACCCACATCATTGAACCCATGGATGCTTCCTTGGCTGATGAGCTGACCGCGGTGAAGCTGAAGCTGGAGCGGCTAAAGTTTGAGAGAGATAACACTGAGAGAATGCTTCAAGAACGGGACCGTATTCTTGAGATTCAAATGACTGAGCTCCATCGCCGCGGAGAGTTCCAGAAAGAGCTTGAAATCGAGGTCGATCGGCTTTATCGATTGAAGCATCTCAAGCTTGCTTGCACGGTATGTAATTAATGCATTTACTTTCTCAATCGATTAAAGCATGATATTATATTTGAATGAATATTGAGCTGAATTCGGGGGTTTTAATTCTGGGGATTTTTGAAAGCAGAGGATGTCTCCAATTCGGTCACTGAGAGACAAAGAAATGGAGAAGAAAAACAAAGAACCAAAACTTGTTGTAAGTAATTGCATTTAACTTTCAGTCTTGTATCTAAAACAATTTCATTTATTTTGAGATTGTAAAATTGAATTGTGTTTTTGTAGAATGAGTGTGAGAAATCAGGAGGGAATAAGGAGGAAATGGTGAGTGAAAACAGCACTGCAGAGAGTCCAACCCCGAGTTTTTCGAGCTCTTCGGCGTCCAAATCGTCATCATCGGTTACTTCCAAGTCGACGGCCACCTCCAAATTGTTGCCAATTCGGTTAAGGTTGAGTTTGGAAAGTGCTTTGGATGAATGAGTAATGAGAGTGTATAAAAATATTTATTGTCAACCATGGTTGATTGATTTTAGATTTTGTTTCCTTAGCTAATTCTTAAGTTATCTTGTTGTATACCTTCAAAAAAAGTAAGTATGATGCTATTACTGGTGGATTGGTGATATGAAGTTGTTTTGGGATAATTGTCAATTGTCAAATGTTTAGCACTGGTGAATTGTGATCAAAAGTTTAGCACTAAACAAGTAAACATGTTTTCTACATTTTTTTTTTCTTTTCTTAATAAGTTAAGATAAAGTGTACTATCGGGTTTTCTTATAGGTCAACTCGACCCGGATTGACCGGCTAGATATATTGAGAGTGTGAGGGATGGTAAGGGGAACCCTCGCTCAAAGTGCCCTTGGTGGGGGGTTAGACTCACAACTTTTTGGTTGGGAGGTGATGTCTTTTCCGCAAGACCAAGATATTTTGGTTACGATTACAACTTATTATTAAGTTCGATTTCTGTTATAGACAAATGCACCTTGTACAACGTGTACTCCCCCGGTTTGAAATAATAGAGACATTTAT

mRNA sequence

ATAATGTGTTTTTTTTTTTGTCGTAATACACGACACTAAAAATGGTTTTACGGAAAAGACATCGTACCTAATCCCAAAAATTGGTACATAGCCGTTGCCCGCCCCCTCCCAATTCAAATTCAAATTCAAATTATGAAATTAACAACCACTTTTAAATAATTGGAGAATATAGCTCATCAGTCATCATCATCATCATCATCACCTCTATTTCTTTGACCATCTCCTCTCTTCAATCTCCCCTCTACAACTCCTAATCTCTCCCCTCATCCATCCTCAATGCTGGCCGCGGAACCCCCCACCGCATCTCCCCACTTCCGCCACCCAAAACCCGGTGGCCGAATACCTTTACAACCCAAAAACAACATTTTAATCAACAACACTTATGAACCCCCAAAATCAAACCCACCAAAAATAACTCACCAACTTCCCTTCCCATTATCACCGATCATCAGTGAATCTAATAAAGAGAATTATTGGGATCTCACTCCCAACAACACCCACATCATTGAACCCATGGATGCTTCCTTGGCTGATGAGCTGACCGCGGTGAAGCTGAAGCTGGAGCGGCTAAAGTTTGAGAGAGATAACACTGAGAGAATGCTTCAAGAACGGGACCGTATTCTTGAGATTCAAATGACTGAGCTCCATCGCCGCGGAGAGTTCCAGAAAGAGCTTGAAATCGAGGTCGATCGGCTTTATCGATTGAAGCATCTCAAGCTTGCTTGCACGAGGATGTCTCCAATTCGGTCACTGAGAGACAAAGAAATGGAGAAGAAAAACAAAGAACCAAAACTTGTTAATGAGTGTGAGAAATCAGGAGGGAATAAGGAGGAAATGGTGAGTGAAAACAGCACTGCAGAGAGTCCAACCCCGAGTTTTTCGAGCTCTTCGGCGTCCAAATCGTCATCATCGGTTACTTCCAAGTCGACGGCCACCTCCAAATTGTTGCCAATTCGGTTAAGGTTGAGTTTGGAAAGTGCTTTGGATGAATGAGTAATGAGAGTGTATAAAAATATTTATTGTCAACCATGGTTGATTGATTTTAGATTTTGTTTCCTTAGCTAATTCTTAAGTTATCTTGTTGTATACCTTCAAAAAAAGTAAGTATGATGCTATTACTGGTGGATTGGTGATATGAAGTTGTTTTGGGATAATTGTCAATTGTCAAATGTTTAGCACTGGTGAATTGTGATCAAAAGTTTAGCACTAAACAAGTAAACATGTTTTCTACATTTTTTTTTTCTTTTCTTAATAAGTTAAGATAAAGTGTACTATCGGGTTTTCTTATAGGTCAACTCGACCCGGATTGACCGGCTAGATATATTGAGAGTGTGAGGGATGGTAAGGGGAACCCTCGCTCAAAGTGCCCTTGGTGGGGGGTTAGACTCACAACTTTTTGGTTGGGAGGTGATGTCTTTTCCGCAAGACCAAGATATTTTGGTTACGATTACAACTTATTATTAAGTTCGATTTCTGTTATAGACAAATGCACCTTGTACAACGTGTACTCCCCCGGTTTGAAATAATAGAGACATTTAT

Coding sequence (CDS)

ATGCTGGCCGCGGAACCCCCCACCGCATCTCCCCACTTCCGCCACCCAAAACCCGGTGGCCGAATACCTTTACAACCCAAAAACAACATTTTAATCAACAACACTTATGAACCCCCAAAATCAAACCCACCAAAAATAACTCACCAACTTCCCTTCCCATTATCACCGATCATCAGTGAATCTAATAAAGAGAATTATTGGGATCTCACTCCCAACAACACCCACATCATTGAACCCATGGATGCTTCCTTGGCTGATGAGCTGACCGCGGTGAAGCTGAAGCTGGAGCGGCTAAAGTTTGAGAGAGATAACACTGAGAGAATGCTTCAAGAACGGGACCGTATTCTTGAGATTCAAATGACTGAGCTCCATCGCCGCGGAGAGTTCCAGAAAGAGCTTGAAATCGAGGTCGATCGGCTTTATCGATTGAAGCATCTCAAGCTTGCTTGCACGAGGATGTCTCCAATTCGGTCACTGAGAGACAAAGAAATGGAGAAGAAAAACAAAGAACCAAAACTTGTTAATGAGTGTGAGAAATCAGGAGGGAATAAGGAGGAAATGGTGAGTGAAAACAGCACTGCAGAGAGTCCAACCCCGAGTTTTTCGAGCTCTTCGGCGTCCAAATCGTCATCATCGGTTACTTCCAAGTCGACGGCCACCTCCAAATTGTTGCCAATTCGGTTAAGGTTGAGTTTGGAAAGTGCTTTGGATGAATGA

Protein sequence

MLAAEPPTASPHFRHPKPGGRIPLQPKNNILINNTYEPPKSNPPKITHQLPFPLSPIISESNKENYWDLTPNNTHIIEPMDASLADELTAVKLKLERLKFERDNTERMLQERDRILEIQMTELHRRGEFQKELEIEVDRLYRLKHLKLACTRMSPIRSLRDKEMEKKNKEPKLVNECEKSGGNKEEMVSENSTAESPTPSFSSSSASKSSSSVTSKSTATSKLLPIRLRLSLESALDE
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo04086.1Spo04086.1mRNA


Homology
[Close]
BLAST of Spo04086.1 vs. NCBI nr
Match: gi|902163147|gb|KNA06784.1| (hypothetical protein SOVF_177890 [Spinacia oleracea])

HSP 1 Score: 446.4 bits (1147), Expect = 3.100e-122
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 1 

		  

Query: 1   MLAAEPPTASPHFRHPKPGGRIPLQPKNNILINNTYEPPKSNPPKITHQLPFPLSPIISE 60
           MLAAEPPTASPHFRHPKPGGRIPLQPKNNILINNTYEPPKSNPPKITHQLPFPLSPIISE
Sbjct: 1   MLAAEPPTASPHFRHPKPGGRIPLQPKNNILINNTYEPPKSNPPKITHQLPFPLSPIISE 60

Query: 61  SNKENYWDLTPNNTHIIEPMDASLADELTAVKLKLERLKFERDNTERMLQERDRILEIQM 120
           SNKENYWDLTPNNTHIIEPMDASLADELTAVKLKLERLKFERDNTERMLQERDRILEIQM
Sbjct: 61  SNKENYWDLTPNNTHIIEPMDASLADELTAVKLKLERLKFERDNTERMLQERDRILEIQM 120

Query: 121 TELHRRGEFQKELEIEVDRLYRLKHLKLACTRMSPIRSLRDKEMEKKNKEPKLVNECEKS 180
           TELHRRGEFQKELEIEVDRLYRLKHLKLACTRMSPIRSLRDKEMEKKNKEPKLVNECEKS
Sbjct: 121 TELHRRGEFQKELEIEVDRLYRLKHLKLACTRMSPIRSLRDKEMEKKNKEPKLVNECEKS 180

Query: 181 GGNKEEMVSENSTAESPTPSFSSSSASKSSSSVTSKSTATSKLLPIRLRLSLESALDE 239
           GGNKEEMVSENSTAESPTPSFSSSSASKSSSSVTSKSTATSKLLPIRLRLSLESALDE
Sbjct: 181 GGNKEEMVSENSTAESPTPSFSSSSASKSSSSVTSKSTATSKLLPIRLRLSLESALDE 238
[Close]
BLAST of Spo04086.1 vs. NCBI nr
Match: gi|731344532|ref|XP_010683471.1| (PREDICTED: uncharacterized protein LOC104898142 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 265.4 bits (677), Expect = 9.700e-68
Identity = 165/246 (67.07%), Postives = 191/246 (77.64%), Query Frame = 1 

		  

Query: 1   MLAAEPPTASPHFRHPKPGGRIPLQPKNNILIN--NTYEPPKSNPPKITHQ----LPFPL 60
           MLA EPPTASPH RHPKPGGR PLQPKNN  I   N   PPKS P KI HQ    +  P 
Sbjct: 1   MLATEPPTASPHLRHPKPGGRKPLQPKNNFFITHKNHNNPPKSTPSKINHQPKPHISSPN 60

Query: 61  SPIISESNKENYWDLTPNNTHIIEPMDASLADELTAVKLKLERLKFERDNTERMLQERDR 120
           SPI ++SNKEN WD TPN   ++E MDASLA ELTAVK KLERLK ER+ T++MLQ+R R
Sbjct: 61  SPI-NDSNKEN-WDPTPN-IKLLEAMDASLAQELTAVKHKLERLKLEREKTDKMLQDRAR 120

Query: 121 ILEIQMTELHRRGEFQKELEIEVDRLYRLKHLKLACTRMSPIRSLRDKEMEKKNKEPKL- 180
            L++Q+ ELH RGEFQKELEIEVDRLYRLK LKLA TRMSPIRSLR+KE+EKKNK+    
Sbjct: 121 FLQVQLIELHHRGEFQKELEIEVDRLYRLKQLKLASTRMSPIRSLREKELEKKNKDESQY 180

Query: 181 -VNECEKSGGNKEEMVSENSTAESPTPSFSSSSASKSSSSVTSKSTATSKLLPIRLRLSL 239
            +N  EKSG +KE +V E+ST ESP  SF+SSSAS S+S+ TSKSTATSK+LPI ++LSL
Sbjct: 181 ELNISEKSGESKEGLVDESSTTESPALSFASSSASNSASN-TSKSTATSKMLPISMKLSL 240
[Close]
BLAST of Spo04086.1 vs. NCBI nr
Match: gi|731344530|ref|XP_010683470.1| (PREDICTED: uncharacterized protein LOC104898142 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 260.8 bits (665), Expect = 2.400e-66
Identity = 165/247 (66.80%), Postives = 191/247 (77.33%), Query Frame = 1 

		  

Query: 1   MLAAEPPTASPHFRHPKPGGRIPLQPKNNILIN--NTYEPPKSNPPKITHQ----LPFPL 60
           MLA EPPTASPH RHPKPGGR PLQPKNN  I   N   PPKS P KI HQ    +  P 
Sbjct: 1   MLATEPPTASPHLRHPKPGGRKPLQPKNNFFITHKNHNNPPKSTPSKINHQPKPHISSPN 60

Query: 61  SPIISESNKENYWDLTPNNTHIIEPMDASLADELTAVKLKLERLKFERDNTERMLQERDR 120
           SPI ++SNKEN WD TPN   ++E MDASLA ELTAVK KLERLK ER+ T++MLQ+R R
Sbjct: 61  SPI-NDSNKEN-WDPTPN-IKLLEAMDASLAQELTAVKHKLERLKLEREKTDKMLQDRAR 120

Query: 121 ILEIQMTELHRRGEFQKELEIEVDRLYRLKHLKLACT-RMSPIRSLRDKEMEKKNKEPKL 180
            L++Q+ ELH RGEFQKELEIEVDRLYRLK LKLA T RMSPIRSLR+KE+EKKNK+   
Sbjct: 121 FLQVQLIELHHRGEFQKELEIEVDRLYRLKQLKLASTQRMSPIRSLREKELEKKNKDESQ 180

Query: 181 --VNECEKSGGNKEEMVSENSTAESPTPSFSSSSASKSSSSVTSKSTATSKLLPIRLRLS 239
             +N  EKSG +KE +V E+ST ESP  SF+SSSAS S+S+ TSKSTATSK+LPI ++LS
Sbjct: 181 YELNISEKSGESKEGLVDESSTTESPALSFASSSASNSASN-TSKSTATSKMLPISMKLS 240
[Close]
BLAST of Spo04086.1 vs. NCBI nr
Match: gi|661886795|emb|CDP09513.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 133.7 bits (335), Expect = 4.400e-28
Identity = 88/180 (48.89%), Postives = 120/180 (66.67%), Query Frame = 1 

		  

Query: 3   AAEPPTASPHFRHPKPGGRIPLQPKNNI---LINNTYEPPKSNPPKITHQLPFPLSPIIS 62
           AA+ P +    + PK  GR PLQPKN+    ++   ++ PK N    T ++   +S + +
Sbjct: 4   AAQSPLSDHQIQRPK-SGRKPLQPKNSPATPVVITPHQKPKQNAA--TDRIE--VSVLDN 63

Query: 63  ESNKENYWDL--TP--NNTHIIEPMDASLADELTAVKLKLERLKFERDNTERMLQERDRI 122
           +SNKEN   L  TP  N    IE  D+SLA+EL+A++ KLERL+ E++ TE+ML ERD +
Sbjct: 64  DSNKENVNPLFATPVKNEEFRIEQFDSSLAEELSAIREKLERLRIEKEKTEKMLSERDLV 123

Query: 123 LEIQMTELHRRGEFQKELEIEVDRLYRLKHLKLACTRMSPIRSLRDKEMEKKNKEPKLVN 176
           L++QM ELH+RGE QK LEIEVDRLYRLK LKL+C  +SPIRSLR+K  EK     +L+N
Sbjct: 124 LDLQMNELHKRGEAQKMLEIEVDRLYRLKQLKLSCMGISPIRSLRNKAKEKGEASDQLLN 178
[Close]
BLAST of Spo04086.1 vs. NCBI nr
Match: gi|697162418|ref|XP_009590006.1| (PREDICTED: high mobility group B protein 6 isoform X2 [Nicotiana tomentosiformis])

HSP 1 Score: 126.7 bits (317), Expect = 5.400e-26
Identity = 90/204 (44.12%), Postives = 131/204 (64.22%), Query Frame = 1 

		  

Query: 1   MLAAEPPTASPHFRHPKP-GGRIPLQPKNNILINNTYEPPKSNPPKITHQLPFPLSPIIS 60
           M +  PP+  P  +  +P  GR PLQPKN     NT   P ++P   T QL   +S +  
Sbjct: 1   MASTAPPSPFPDNQIHRPKSGRKPLQPKNT----NTPAIPNNHPKPKTLQL-IGIS-LTQ 60

Query: 61  ESNKENYWDLTPNNTHIIE---PMDASLADELTAVKLKLERLKFERDNTERMLQERDRIL 120
            SNKEN      N    I+   P D+SLA+EL+A++ KLERL+ +R+ TE+ML+ER+ +L
Sbjct: 61  NSNKENLHPKRENAVLCIQAEVPFDSSLAEELSAIREKLERLRIDREKTEKMLKERNLML 120

Query: 121 EIQMTELHRRGEFQKELEIEVDRLYRLKHLKLACTRMSPIRSLRDKEMEKK--NKEPKLV 180
           ++QM EL  RGE QKELE+EVDRL+RLK L+L+C ++SPIR+LR+KE EKK    +PK +
Sbjct: 121 DLQMKELFNRGELQKELELEVDRLFRLKELRLSCMKISPIRTLREKEEEKKMNGYQPKEL 180

Query: 181 NECEKSGGNKEEMVSENSTAESPT 199
           N  E     ++++ +E+S+   P+
Sbjct: 181 NYDE-----EDDIRTESSSENDPS 193
[Close]
BLAST of Spo04086.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QHQ7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_177890 PE=4 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 2.100e-122
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 1 

		  

Query: 1   MLAAEPPTASPHFRHPKPGGRIPLQPKNNILINNTYEPPKSNPPKITHQLPFPLSPIISE 60
           MLAAEPPTASPHFRHPKPGGRIPLQPKNNILINNTYEPPKSNPPKITHQLPFPLSPIISE
Sbjct: 1   MLAAEPPTASPHFRHPKPGGRIPLQPKNNILINNTYEPPKSNPPKITHQLPFPLSPIISE 60

Query: 61  SNKENYWDLTPNNTHIIEPMDASLADELTAVKLKLERLKFERDNTERMLQERDRILEIQM 120
           SNKENYWDLTPNNTHIIEPMDASLADELTAVKLKLERLKFERDNTERMLQERDRILEIQM
Sbjct: 61  SNKENYWDLTPNNTHIIEPMDASLADELTAVKLKLERLKFERDNTERMLQERDRILEIQM 120

Query: 121 TELHRRGEFQKELEIEVDRLYRLKHLKLACTRMSPIRSLRDKEMEKKNKEPKLVNECEKS 180
           TELHRRGEFQKELEIEVDRLYRLKHLKLACTRMSPIRSLRDKEMEKKNKEPKLVNECEKS
Sbjct: 121 TELHRRGEFQKELEIEVDRLYRLKHLKLACTRMSPIRSLRDKEMEKKNKEPKLVNECEKS 180

Query: 181 GGNKEEMVSENSTAESPTPSFSSSSASKSSSSVTSKSTATSKLLPIRLRLSLESALDE 239
           GGNKEEMVSENSTAESPTPSFSSSSASKSSSSVTSKSTATSKLLPIRLRLSLESALDE
Sbjct: 181 GGNKEEMVSENSTAESPTPSFSSSSASKSSSSVTSKSTATSKLLPIRLRLSLESALDE 238
[Close]
BLAST of Spo04086.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BYE3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g156840 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 6.700e-68
Identity = 165/246 (67.07%), Postives = 191/246 (77.64%), Query Frame = 1 

		  

Query: 1   MLAAEPPTASPHFRHPKPGGRIPLQPKNNILIN--NTYEPPKSNPPKITHQ----LPFPL 60
           MLA EPPTASPH RHPKPGGR PLQPKNN  I   N   PPKS P KI HQ    +  P 
Sbjct: 1   MLATEPPTASPHLRHPKPGGRKPLQPKNNFFITHKNHNNPPKSTPSKINHQPKPHISSPN 60

Query: 61  SPIISESNKENYWDLTPNNTHIIEPMDASLADELTAVKLKLERLKFERDNTERMLQERDR 120
           SPI ++SNKEN WD TPN   ++E MDASLA ELTAVK KLERLK ER+ T++MLQ+R R
Sbjct: 61  SPI-NDSNKEN-WDPTPN-IKLLEAMDASLAQELTAVKHKLERLKLEREKTDKMLQDRAR 120

Query: 121 ILEIQMTELHRRGEFQKELEIEVDRLYRLKHLKLACTRMSPIRSLRDKEMEKKNKEPKL- 180
            L++Q+ ELH RGEFQKELEIEVDRLYRLK LKLA TRMSPIRSLR+KE+EKKNK+    
Sbjct: 121 FLQVQLIELHHRGEFQKELEIEVDRLYRLKQLKLASTRMSPIRSLREKELEKKNKDESQY 180

Query: 181 -VNECEKSGGNKEEMVSENSTAESPTPSFSSSSASKSSSSVTSKSTATSKLLPIRLRLSL 239
            +N  EKSG +KE +V E+ST ESP  SF+SSSAS S+S+ TSKSTATSK+LPI ++LSL
Sbjct: 181 ELNISEKSGESKEGLVDESSTTESPALSFASSSASNSASN-TSKSTATSKMLPISMKLSL 240
[Close]
BLAST of Spo04086.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C2L3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g156840 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.700e-66
Identity = 165/247 (66.80%), Postives = 191/247 (77.33%), Query Frame = 1 

		  

Query: 1   MLAAEPPTASPHFRHPKPGGRIPLQPKNNILIN--NTYEPPKSNPPKITHQ----LPFPL 60
           MLA EPPTASPH RHPKPGGR PLQPKNN  I   N   PPKS P KI HQ    +  P 
Sbjct: 1   MLATEPPTASPHLRHPKPGGRKPLQPKNNFFITHKNHNNPPKSTPSKINHQPKPHISSPN 60

Query: 61  SPIISESNKENYWDLTPNNTHIIEPMDASLADELTAVKLKLERLKFERDNTERMLQERDR 120
           SPI ++SNKEN WD TPN   ++E MDASLA ELTAVK KLERLK ER+ T++MLQ+R R
Sbjct: 61  SPI-NDSNKEN-WDPTPN-IKLLEAMDASLAQELTAVKHKLERLKLEREKTDKMLQDRAR 120

Query: 121 ILEIQMTELHRRGEFQKELEIEVDRLYRLKHLKLACT-RMSPIRSLRDKEMEKKNKEPKL 180
            L++Q+ ELH RGEFQKELEIEVDRLYRLK LKLA T RMSPIRSLR+KE+EKKNK+   
Sbjct: 121 FLQVQLIELHHRGEFQKELEIEVDRLYRLKQLKLASTQRMSPIRSLREKELEKKNKDESQ 180

Query: 181 --VNECEKSGGNKEEMVSENSTAESPTPSFSSSSASKSSSSVTSKSTATSKLLPIRLRLS 239
             +N  EKSG +KE +V E+ST ESP  SF+SSSAS S+S+ TSKSTATSK+LPI ++LS
Sbjct: 181 YELNISEKSGESKEGLVDESSTTESPALSFASSSASNSASN-TSKSTATSKMLPISMKLS 240
[Close]
BLAST of Spo04086.1 vs. UniProtKB/TrEMBL
Match: A0A068UPF9_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00028907001 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.100e-28
Identity = 88/180 (48.89%), Postives = 120/180 (66.67%), Query Frame = 1 

		  

Query: 3   AAEPPTASPHFRHPKPGGRIPLQPKNNI---LINNTYEPPKSNPPKITHQLPFPLSPIIS 62
           AA+ P +    + PK  GR PLQPKN+    ++   ++ PK N    T ++   +S + +
Sbjct: 4   AAQSPLSDHQIQRPK-SGRKPLQPKNSPATPVVITPHQKPKQNAA--TDRIE--VSVLDN 63

Query: 63  ESNKENYWDL--TP--NNTHIIEPMDASLADELTAVKLKLERLKFERDNTERMLQERDRI 122
           +SNKEN   L  TP  N    IE  D+SLA+EL+A++ KLERL+ E++ TE+ML ERD +
Sbjct: 64  DSNKENVNPLFATPVKNEEFRIEQFDSSLAEELSAIREKLERLRIEKEKTEKMLSERDLV 123

Query: 123 LEIQMTELHRRGEFQKELEIEVDRLYRLKHLKLACTRMSPIRSLRDKEMEKKNKEPKLVN 176
           L++QM ELH+RGE QK LEIEVDRLYRLK LKL+C  +SPIRSLR+K  EK     +L+N
Sbjct: 124 LDLQMNELHKRGEAQKMLEIEVDRLYRLKQLKLSCMGISPIRSLRNKAKEKGEASDQLLN 178
[Close]
BLAST of Spo04086.1 vs. UniProtKB/TrEMBL
Match: M5W0B5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011929mg PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.000e-23
Identity = 82/194 (42.27%), Postives = 116/194 (59.79%), Query Frame = 1 

		  

Query: 1   MLAAEPPTASPHFRHPKPGGRIPLQPKNN--ILINNTYEPPKSNPPKITHQLPFPLSPII 60
           M A + P        PK  GR PLQP+N    L+N+     K     I          + 
Sbjct: 1   MQALQSPVTGDQLLRPK-SGRKPLQPRNTRATLVNSNLTKLKPMHKWIG---------VD 60

Query: 61  SESNKENYWDLTPNNTHIIEPMDASLADELTAVKLKLERLKFERDNTERMLQERDRILEI 120
            +SNKEN   +    T +IEP+DASLA+EL+A++ K+ERL+ +R+ TE+ML+ERD ++E+
Sbjct: 61  DDSNKENR-PIYATPTKMIEPIDASLAEELSAIRKKMERLRLDRERTEKMLEERDMVMEM 120

Query: 121 QMTELHRRGEFQKELEIEVDRLYRLKHLKLACTRMSPIRSLRDKEMEKKNKEPKLVNECE 180
           QM EL  RG+ QK LEIE+DR+YRL  L     R+SPIRSLR+KE +KK  + +   + E
Sbjct: 121 QMKELESRGQIQKMLEIELDRIYRLNQLHTRSNRVSPIRSLREKEQQKKATKIESTTQ-E 180

Query: 181 KSGGNKEEMVSENS 193
            +  + EE V EN+
Sbjct: 181 VTAEDMEESVDENT 182
[Close]
BLAST of Spo04086.1 vs. TAIR (Arabidopsis)
Match: AT5G01910.1 (unknown protein)

HSP 1 Score: 90.9 bits (224), Expect = 1.100e-18
Identity = 73/194 (37.63%), Postives = 107/194 (55.15%), Query Frame = 1 

		  

Query: 17  KPGGRIPLQPKNNILINNTYEPPKSNPPKITHQLPFPLSPIISESNKENYWDLTPNNTHI 76
           K  GR  LQP+N       Y+ PK +         F + P  +E  KEN         ++
Sbjct: 2   KCSGRKALQPRN------IYQTPKEDA--------FFVKPKAAEKLKENL--------NL 61

Query: 77  IEPMDASLADELTAVKLKLERLKFERDNTERMLQERDRILEIQMTELHRRGEFQKELEIE 136
              +DASLA+EL+A K KLERL+ +R++TE++L+ERD  +++ M+ L +RGE QK LEI+
Sbjct: 62  ETSIDASLAEELSAFKKKLERLREDRESTEKLLKERDEAMDLHMSHLLQRGETQKSLEIQ 121

Query: 137 VDRLYRLKHLKLACTRMSPIRSLRDKEMEKKNKEPKLVNECEKSGGNKEEMVSENSTAES 196
           VDRL+RLK L    +++SPIRSLR KE ++K +               EE   E S+ E 
Sbjct: 122 VDRLFRLKELHAYSSKISPIRSLRAKEQQEKMRRFTFAG---------EEQPDEESSVEI 164

Query: 197 PTPSFSSSSASKSS 211
                   S++KS+
Sbjct: 182 ANGPIEEESSTKSN 164
[Close]
BLAST of Spo04086.1 vs. TAIR (Arabidopsis)
Match: AT4G23800.1 (HMG (high mobility group) box protein)

HSP 1 Score: 50.1 bits (118), Expect = 2.200e-6
Identity = 32/90 (35.56%), Postives = 51/90 (56.67%), Query Frame = 1 

		  

Query: 83  SLADELTAVKLKLERLKFERDNTERMLQERDRILEIQMTELHRRGEFQKELEIEVDRLYR 142
           S   +L  ++  LE++K E+D TE +L+E+D IL  +  EL  R   Q++L++E+ +L +
Sbjct: 43  SFEQDLMEMQTMLEKMKIEKDKTEELLKEKDEILRKKEEELETRDAEQEKLKVELKKLQK 102

Query: 143 LKHLKLACTRMSPIRSLRDKEMEKKNKEPK 173
           +K  K   T      SL   E EK NK+ K
Sbjct: 103 MKEFKPNMTFACGQSSLTQAEQEKANKKKK 132
The following BLAST results are available for this feature:
BLAST of Spo04086.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902163147|gb|KNA06784.1|3.1e-122100.hypothetical protein SOVF_1778... [more]
gi|731344532|ref|XP_010683471.1|9.7e-6867.0PREDICTED: uncharacterized pro... [more]
gi|731344530|ref|XP_010683470.1|2.4e-6666.8PREDICTED: uncharacterized pro... [more]
gi|661886795|emb|CDP09513.1|4.4e-2848.8unnamed protein product [Coffe... [more]
gi|697162418|ref|XP_009590006.1|5.4e-2644.1PREDICTED: high mobility group... [more]
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BLAST of Spo04086.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QHQ7_SPIOL2.1e-122100.Uncharacterized protein OS=Spi... [more]
A0A0J8BYE3_BETVU6.7e-6867.0Uncharacterized protein OS=Bet... [more]
A0A0J8C2L3_BETVU1.7e-6666.8Uncharacterized protein OS=Bet... [more]
A0A068UPF9_COFCA3.1e-2848.8Uncharacterized protein OS=Cof... [more]
M5W0B5_PRUPE1.0e-2342.2Uncharacterized protein OS=Pru... [more]
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BLAST of Spo04086.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo04086.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G01910.11.1e-1837.6unknown protein[more]
AT4G23800.12.2e-635.5HMG (high mobility group) box ... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36790FAMILY NOT NAMEDcoord: 2..170
score: 1.9
NoneNo IPR availablePANTHERPTHR36790:SF1SUBFAMILY NOT NAMEDcoord: 2..170
score: 1.9

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009097 isoleucine biosynthetic process
biological_process GO:0009098 leucine biosynthetic process
biological_process GO:0006090 pyruvate metabolic process
biological_process GO:0009099 valine biosynthetic process
molecular_function GO:0003852 2-isopropylmalate synthase activity
RNA-Seq Expression