Spo04110 (gene)

Overview
NameSpo04110
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionNuclear transcription factor Y subunit C8
LocationSpoScf_00647 : 252597 .. 259141 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGTTGTACGTCTTCTTAATTTCGTCTGGACTTTCCATCTCTCGTACGAAAACTGAATTCTAACTCCTTTCGAATTACCTTGGGTTTTCCCCCAAATTGCCCCCTTTTTAAGCTCTGTAAATACTTCTAATTCATCCGAAATTGCTTAGTTCGATTCGACTGTTAGTCGTCTGATCTGTTTCTGCAAATCCCCTTTATTTTTATTTTAAATAAATTTGTCCTTTTTGACGAGAAAATTCTGAAGAAATCATGAGGAAGAAGCTCGATACTCGTTTCCCAGCTGTATGTTTATCTCTTTCTCTCTCCTCTTTTATTTCTTTTTCTTATTGATCTATCCTGATTATGTTACCAGATCTGAATTTTTATGGATTTTTTTAATACTTTGTTTGAGTGGATTATATGATTTATTGCTTTATACCCTTTTCAATTTAGTGGATTTTTGTGTAACTTTTTGGTGTTTTGATGATCATATATGAGGATAAATTGATTTGAGCCATATGGGTGTTGTTCTTTCGAATTTAGTTGATTTTTGAGATGTTTAATGTGAAGATTGTTTAATTTTTAGGATAATATGATCCGAGTCATGCTCAGTTGCCGTTTTGTGTGTGTTTAATTGGTTCTAGATGGTTGTATTGTTCCTGTTTGAAATTTTCTGTGGTGCTGACTTTTTGGGGTCAAGTTCAAATTAGTTTCCTGATGAGTACGAGCTTTGTATATTTTTTTGTTGATCATAATGAATTGAGAAAAATGAGAGGTTAAAGGATTGCGATTGGAGGAAGATATGATGAACTTTTCTACTGAGTTGCGTGATTCAGGGTGATGATTTGTTCTCGCTGTTTGTTTGCCTCCATATAGGGTAAATAGTTTGTGATTGATTGTCTAATTTGTTCAAAGGACGATGTTTTGTTTGTGAAGCCAATGTTTTGACTTCATTTATAACTTTCCATTATTATGCCAGTATTAGTTACTAACTATATATAATAGAGAAAGGTGTGATGCTGCAGTTGACGGTCAGAGTTTTGGCTGAATTTGACATTTCGGGATTATTTTTCCTTTAGATATTTCAACTGGTTGTTCTATTTGTTATCACTGGTTAGTTTGTTGGAGATATCTACCTGAATACTGGACATTTTTGGTTTTAACTTTTAAGTATTTTAGGGTTGGCACAAACCCAACCTTCATATAAATATGGCTGAAGATAAAAGCAGTAGATTCAAGGACAAACTTGAGCCGTTTATGTAACTATTAGTTGTTTTAGTAATAAATGCATTTTGTTGTGAAATTGTTTTATGGTTAATTATGGGGAAATAGCTGTTGTTGAACAGAATTGATGTGGTGAGGATAAGGAAGTTTTTTTTCCAAGTCTTTTCAATTTTGGATGGGTTTAGCTCATTAAAGAAGAAAGGGAAATAGGTTCATCTTGTTCTTTCCCCTTCTTCCCAAACTAACATCCAAACAAGGGGAAATTGATCTCTTACTTTGTGTCCCTCCCCTTCTTTCCAAAACATATACTACTTTGTATCTGGACAACCATTATTATTTTCTATCTCTTTCCCCACCTTCCGATTAGTCCTTCACAATGACGTTCTCTTGCAAGTGGCATCTCAGATCACTATTGCACACCTAGCTTCTTATGGCTGTTTGTAAGTTACATTCTATTTAAAAATTAAAATGGAGGATTCCTTCTATAGCCTGTGATGTTTATTTAAGGTGCAGTTTTGATGGGTCAATCATTTATGCATTCTGTTGATTGGTTGTTTTGATTGAATTGGCAGGCTCGGATAAAAAAGATCATGCAAGCTGATGAAGATGTTGGGAAGATAGCAATGGCAGTTCCAGTTTTAGTTTGTAAGTGTCATCAAGATTTGGGTTTTGAACTTTTGAAATTATGAATGTATGCTCACACTCTGAATTTATATTTGTGCAGCAAAGGCATTGGAATTGTTTCTACAAGACCTGTGTGATCGTACTTATGACATAACTCTTCAAAGAGGAGCCAAAACTATGAGTTCTCTTCATCTGTGAGTTCAAAGCTAGATTTTTTTTGGGGCTATTTTACCCAAGTGTTGAATGTCTTGCATTCTCGACTTTATGTGTGATGTGTGGGATTGTCTGTCTTTGGGTGTGGTTTGCCCGCTTTTTTTCTATATAAATCAAGCTGACAGTTTAGATAGTTTTGGTGTGTGTAAAAATAAATAAAGGCAGTTAGATGTTTTAGTGACGGGACGTGCTACAAACATTTTCCAAACAATTAAAATGATGTTTGCTGACATTTACAACAGACGGTATATAGTAACTACTTTGGCCTTTTTGATAATTGTCAGCATGTACAGTTGGAGTTCCTTTTCTGCACACTTTGTGATTTGTATTAATCATTTGTACTTACAATCTCCTCATTGCCATTTTTGTTTCCTTCTTCCACTTTCTCCCTTTTCTCGTTGGCTAGTCTGTGTTTTGTGGTGGGGGATGTATTGTGGGTGACTCTACGATGGCCTAGCTTTAAAATAGAGGTCGAACATAGTGAAAAGAGATCCAAATTAAGGGCTTGACTATAACAAGCCAGTGGGTGATGAATGGTACTTTGATAAAACGTTTTTTGTAATGGCTGAGGATAAGAATGATGTGAGCCAAAGAGAATGGAATGGTGATTTATGCTAAAAAATTGATACAGTATGAATTGCGAGTCACAGAATTTCTGTTTTTGTCCTATAATCTGTCCTTTATATTGTTACTCATTCCGTCCCAATTTAATCGTCACATTAAGTTTTTGACGGAGTTTTATGCGATAAGTAGATGTTAGCTTTTCTATTATATTCTAATAGAAAAGTAGGGTGCGATGGGAGATAAATGGCGAAATATTTTAATTGAATGAGAGAAAGAGTGGGATTCTGACTTCTGATAGTGGGAAGAGAGATGAAATAAAATATTAATATTAGTAGGTCTATGCCATAAAAGGAAATATGATAATTAAATTGGGACGCGAAAAAAGAAAGTGTGACGATTAAATTGGGATAGGAGGGAGTACATAGCAGTCCACTTATTTGTATGGGTCAACTGTGTTCCTTCATTTCTTATGTAAAGCTGCACTGTTTGAGCACCATATCTTCTTACCCTAGGTGAGAGTCTTATTGGAGGCTCTTGGTGACCGTATGGCTGGATCTGTCTTTTCATATTTGGAGCTATTATTACAAACAGCTATTTAAGCATCATAGTATAGAGTTCCTAGAAAGCTAGATGATATACAAGTTTACATTGCTCATTTTTTGTGAAATATCCATTTGGAATATTTGACTTAAATACTGGCCTTTCATCAGCTTTTATGTCAAGGGCTCAAGGTCCCTCTCTTTGACATCTTACTTAGCCATTTGACCAAGGGTCCTGGCATGTGATGTTAGGCAGTGAGATTGGCCATTTGTGCTGTATGTTTAGTGATACCGAAAAAGTTATCTGTGACTTGAGCACTTGCTGTCAGATGATAATAAAGAACTTGCCAATTAGTTTCTTGGAAGAAGTTGCCCAAATTAGTTGGTTCAATCAGGGGCCTCCGGCCATGTGAACTTCTCTACTGCAAACTCTTTCTTGGTATATTGTCTTACCGTGAATCCATTATTGGTGAATCATTTTGTAGATTGCTTTGGGAATGAGTAACTCCTTGTGAAAGCTCAAACTGTCTAGAAATGAAACTTGATTGGTTGCTAATCGATGTGTGTGCTTCAAGGATAGATGGCCCATACACCAACCAGATCAAATAGTCTTGCAAAAATCCTTGTGTTATTGTTTTGCAGTTGCATAGTTTAGTACTCTAGGTCATATCCTATGTGTTGTCTGGGGCCTTTTTTGGGGAAGGCGTACTGTACGTGGGGCACGAGAACACTGTTGGACAAACCTTAATATTCTTTCAATTTGATTTGGCTGTGTTGCCAACTGATGAGACCTAGACTGAAGGCGGAAGCCATGAATTCCATTCATACCAGACTCTCAATTTCCATTTCAATTTTTCTTGCAACACAAATGGTTTTGTCATCCTTTATATTGCTTGTCTAGTTTTGTTCAGCTATTGATTCTTTGTTAATGGATGGACGCAGAAAACATTGCATACATAGCTTCAGCATGTTTGATTTTCTGAAGGACGTAGTGAGCAAGGTTCCTGATTATGGTAATTCTGATGCTAATGCAGATGATCGAACTGCTACCAAGAGAAGGTTAGTGCAATTGTCGTCTGAACTCCGATGGGTTCGGTTTTTTCTCTTTTCTCGTGTATTTACTTTTAGAATACTCTGTAAGAAATAACAGACTAAACCTTTGTCATTTGCCAGAAAGTCTGCAGTTGACGAGTATCATGACAGCGATGAAGAGTTAAAGAAAAGCAGGATGGTGAGACACTAGCATACTCTTGGTTCTTTGCTATCCTTCTTTTATACATAATTCTATTTTTCTACATGCGAAATTTATTCTACTTCATTGTTTGCAGAAAACCCATTGACAAACATTTAAAAAATATTGAATTGAATAGAGCCCATTATAATTAAGAATCACTATGTTAGAGGTCAAAGTGAAGAACTGTTCTGAAGTATACTCTGAGTCTCTGGTTCTTATAAATAGGGAAGTTAAAAATGGTACCCCTAAAACTTACTGGGACTTTAGTTTGATAAAATATTCTCAATGGCGCATTTTGGTAGATGTGGGATTGAAGTACAGATAGAGGTTTGACCACCTTAATCAGATACGTTGTAAGCCATTTTAAAGAGCAGATTGGTACCAGAATGTTATCTTTCATAACACTGGATCAGTATTTTCATTTAGTGGCTTTGGAGAGGACAAAAGGGAATCTAAACCTGACATGCCATCTGAAGGCTTGGAACTTTGGAAGAAATCACAACTAATATTGGTGAAAATCACTCAAGTTTATGATTTTATCCATTAAGTATATGTATTTAAATACGTTCATGTCCCTGTACGTAGTTTAAAGAAAGGCTCCTATATGTAAATGGTATTTCTCATCTCGGTTTGTCACCGTCTAACTGCTAATAGTTAACATCTATTCTACATTTCTACTGAACATCTTGCTTTCAAACTGGTAATGTCTAATGCTACAACTTGGTCAAACCAGCTAATACATTCAGCGCTAGCTAACAGCTAGTTCCCAACAACATAACCAGGTGTAGATAAAGTTTCCTGCTCATGGTTGTGAGCGTTCACCTAACACTCCTTACACAGCGAAAGAAGGGGTGTAGCTCGTGTAAGGATAAATAAGAAGAATATAAATTCTCTTCCTTCTGTTTTGAATTTTTTTATTTGAAAGAAGACATTTTGGTTTTCATCTGTTTTCTTTTTTAAAGAAGACATTTATCTTTTCTTGGCAAGACCTATTTTAAAGAGATGTACTTATTATTGCTTCCATACGCAAAGCAATTGTTAAGTAGCAATAGTGTTTGAGTTATTTAGTATTGTGTGGAGAATAACAGGCTTTGGTTGACTAAATGCAGCAAGAAATGAGCCATGCCAGCGGCAGTGGTAGAGGAAGAGGACGGGGGAGAGGACGAGGACGAGGACGAGGAAGGCCTCCGCTAGAAAGAGAGGCAGTCTCTCATCATGAGATGGACGCCGAACCATCGACAACTTTTGAGCCAATGAATAAGCCTTGCCCTATCCAAGTACCTAACACGGATGATGATCCCAATAATAAATTAGATCCAATGAAGGAGAGTCCAGTTGTAGGGGACGGTGGAGACACAGCCATCAGGAATTTTGATTTGAATGCTGAGGTAGCTGCTGACAACCAGGAAATGGTACCCACTGTAACAGCAGCAGCAGCAGCAGCAGCAGCAGAAAATGATGTAGCATCAGTCGAGCAGCCACCTCCTGAAAGCAAGAACGATGAGTTGGTCTCTGAGGTCGATGGGATGGCCATTGACCCACATCAGATAGCCCAATTTAACTCGAGAATAGACGAAGATGAAGACTATGATGAAGAGTAGCTGAATCAATGTAGGAGCGGAGGTAGGATGAAAATGTAGATTAAAGTGGAGACCTATTCCTAATCCTAATCCTAATCCTTGGGTGAAATGGAAAGACAATAGAAATCTTTTAACTAAAGTCTCTGCGGGATCTGTATAATTGATGATTAGTAGGTTTTCTAAGTAGGAGGAGGTATGGTTTGCATTCTTGTCACCATCTTTAATTGCAGAAATATTTTAACATAGTCGGATGTCGTAGTGTGCAGTCTAGTCATTTTATGTATTTTTCTTTGGGACTTTTAGGCAAAATTACCCTCAATGGCATGAATGCAAGTCAATAGCACCAACTTGGGCCATTTACGACTTGTTTCAGTGGCATTGTTGACTTCAATTACCAAGTTAAATACCATGACAATGACTAAATAATGTCATTATGATTATGAAACAAGTTCATTCATATCACGTACTCAAAAGAAATAGAGAAACTTAAAGAAAGAAATGATCAATAATCTGGATGATATTGTTCGTCCTTTGCCCTTTGAGCACGGATTTTTTTCTTTTAAATAAAATATTTACTAACAAACACAG

mRNA sequence

TGGTTGTACGTCTTCTTAATTTCGTCTGGACTTTCCATCTCTCGTACGAAAACTGAATTCTAACTCCTTTCGAATTACCTTGGGTTTTCCCCCAAATTGCCCCCTTTTTAAGCTCTGTAAATACTTCTAATTCATCCGAAATTGCTTAGTTCGATTCGACTGTTAGTCGTCTGATCTGTTTCTGCAAATCCCCTTTATTTTTATTTTAAATAAATTTGTCCTTTTTGACGAGAAAATTCTGAAGAAATCATGAGGAAGAAGCTCGATACTCGTTTCCCAGCTGCTCGGATAAAAAAGATCATGCAAGCTGATGAAGATGTTGGGAAGATAGCAATGGCAGTTCCAGTTTTAGTTTCAAAGGCATTGGAATTGTTTCTACAAGACCTGTGTGATCGTACTTATGACATAACTCTTCAAAGAGGAGCCAAAACTATGAGTTCTCTTCATCTAAAACATTGCATACATAGCTTCAGCATGTTTGATTTTCTGAAGGACGTAGTGAGCAAGGTTCCTGATTATGGTAATTCTGATGCTAATGCAGATGATCGAACTGCTACCAAGAGAAGAAAGTCTGCAGTTGACGAGTATCATGACAGCGATGAAGAGTTAAAGAAAAGCAGGATGCAAGAAATGAGCCATGCCAGCGGCAGTGGTAGAGGAAGAGGACGGGGGAGAGGACGAGGACGAGGACGAGGAAGGCCTCCGCTAGAAAGAGAGGCAGTCTCTCATCATGAGATGGACGCCGAACCATCGACAACTTTTGAGCCAATGAATAAGCCTTGCCCTATCCAAGTACCTAACACGGATGATGATCCCAATAATAAATTAGATCCAATGAAGGAGAGTCCAGTTGTAGGGGACGGTGGAGACACAGCCATCAGGAATTTTGATTTGAATGCTGAGGTAGCTGCTGACAACCAGGAAATGGTACCCACTGTAACAGCAGCAGCAGCAGCAGCAGCAGCAGAAAATGATGTAGCATCAGTCGAGCAGCCACCTCCTGAAAGCAAGAACGATGAGTTGGTCTCTGAGGTCGATGGGATGGCCATTGACCCACATCAGATAGCCCAATTTAACTCGAGAATAGACGAAGATGAAGACTATGATGAAGAGTAGCTGAATCAATGTAGGAGCGGAGGTAGGATGAAAATGTAGATTAAAGTGGAGACCTATTCCTAATCCTAATCCTAATCCTTGGGTGAAATGGAAAGACAATAGAAATCTTTTAACTAAAGTCTCTGCGGGATCTGTATAATTGATGATTAGTAGGTTTTCTAAGTAGGAGGAGGTATGGTTTGCATTCTTGTCACCATCTTTAATTGCAGAAATATTTTAACATAGTCGGATGTCGTAGTGTGCAGTCTAGTCATTTTATGTATTTTTCTTTGGGACTTTTAGGCAAAATTACCCTCAATGGCATGAATGCAAGTCAATAGCACCAACTTGGGCCATTTACGACTTGTTTCAGTGGCATTGTTGACTTCAATTACCAAGTTAAATACCATGACAATGACTAAATAATGTCATTATGATTATGAAACAAGTTCATTCATATCACGTACTCAAAAGAAATAGAGAAACTTAAAGAAAGAAATGATCAATAATCTGGATGATATTGTTCGTCCTTTGCCCTTTGAGCACGGATTTTTTTCTTTTAAATAAAATATTTACTAACAAACACAG

Coding sequence (CDS)

ATGAGGAAGAAGCTCGATACTCGTTTCCCAGCTGCTCGGATAAAAAAGATCATGCAAGCTGATGAAGATGTTGGGAAGATAGCAATGGCAGTTCCAGTTTTAGTTTCAAAGGCATTGGAATTGTTTCTACAAGACCTGTGTGATCGTACTTATGACATAACTCTTCAAAGAGGAGCCAAAACTATGAGTTCTCTTCATCTAAAACATTGCATACATAGCTTCAGCATGTTTGATTTTCTGAAGGACGTAGTGAGCAAGGTTCCTGATTATGGTAATTCTGATGCTAATGCAGATGATCGAACTGCTACCAAGAGAAGAAAGTCTGCAGTTGACGAGTATCATGACAGCGATGAAGAGTTAAAGAAAAGCAGGATGCAAGAAATGAGCCATGCCAGCGGCAGTGGTAGAGGAAGAGGACGGGGGAGAGGACGAGGACGAGGACGAGGAAGGCCTCCGCTAGAAAGAGAGGCAGTCTCTCATCATGAGATGGACGCCGAACCATCGACAACTTTTGAGCCAATGAATAAGCCTTGCCCTATCCAAGTACCTAACACGGATGATGATCCCAATAATAAATTAGATCCAATGAAGGAGAGTCCAGTTGTAGGGGACGGTGGAGACACAGCCATCAGGAATTTTGATTTGAATGCTGAGGTAGCTGCTGACAACCAGGAAATGGTACCCACTGTAACAGCAGCAGCAGCAGCAGCAGCAGCAGAAAATGATGTAGCATCAGTCGAGCAGCCACCTCCTGAAAGCAAGAACGATGAGTTGGTCTCTGAGGTCGATGGGATGGCCATTGACCCACATCAGATAGCCCAATTTAACTCGAGAATAGACGAAGATGAAGACTATGATGAAGAGTAG

Protein sequence

MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPVLVSKALELFLQDLCDRTYDITLQRGAKTMSSLHLKHCIHSFSMFDFLKDVVSKVPDYGNSDANADDRTATKRRKSAVDEYHDSDEELKKSRMQEMSHASGSGRGRGRGRGRGRGRGRPPLEREAVSHHEMDAEPSTTFEPMNKPCPIQVPNTDDDPNNKLDPMKESPVVGDGGDTAIRNFDLNAEVAADNQEMVPTVTAAAAAAAAENDVASVEQPPPESKNDELVSEVDGMAIDPHQIAQFNSRIDEDEDYDEE
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo04110.1Spo04110.1mRNA


Homology
[Close]
BLAST of Spo04110.1 vs. NCBI nr
Match: gi|902212730|gb|KNA17068.1| (hypothetical protein SOVF_083410 [Spinacia oleracea])

HSP 1 Score: 551.6 bits (1420), Expect = 8.200e-154
Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 1 

		  

Query: 1   MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPVLVSKALELFLQDLCDRTYDITLQRGAK 60
           MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPVLVSKALELFLQDLCDRTYDITLQRGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPVLVSKALELFLQDLCDRTYDITLQRGAK 60

Query: 61  TMSSLHLKHCIHSFSMFDFLKDVVSKVPDYGNSDANADDRTATKRRKSAVDEYHDSDEEL 120
           TMSSLHLKHCIHSFSMFDFLKDVVSKVPDYGNSDANADDRTATKRRKSAVDEYHDSDEEL
Sbjct: 61  TMSSLHLKHCIHSFSMFDFLKDVVSKVPDYGNSDANADDRTATKRRKSAVDEYHDSDEEL 120

Query: 121 KKSRMQEMSHASGSGRGRGRGRGRGRGRGRPPLEREAVSHHEMDAEPSTTFEPMNKPCPI 180
           KKSRMQEMSHASGSGRGRGRGRGRGRGRGRPPLEREAVSHHEMDAEPSTTFEPMNKPCPI
Sbjct: 121 KKSRMQEMSHASGSGRGRGRGRGRGRGRGRPPLEREAVSHHEMDAEPSTTFEPMNKPCPI 180

Query: 181 QVPNTDDDPNNKLDPMKESPVVGDGGDTAIRNFDLNAEVAADNQEMVPTVTAAAAAAAAE 240
           QVPNTDDDPNNKLDPMKESPVVGDGGDTAIRNFDLNAEVAADNQEMVPTVTAAAAAAAAE
Sbjct: 181 QVPNTDDDPNNKLDPMKESPVVGDGGDTAIRNFDLNAEVAADNQEMVPTVTAAAAAAAAE 240

Query: 241 NDVASVEQPPPESKNDELVSEVDGMAIDPHQIAQFNSRIDEDEDYDEE 289
           NDVASVEQPPPESKNDELVSEVDGMAIDPHQIAQFNSRIDEDEDYDEE
Sbjct: 241 NDVASVEQPPPESKNDELVSEVDGMAIDPHQIAQFNSRIDEDEDYDEE 288
[Close]
BLAST of Spo04110.1 vs. NCBI nr
Match: gi|731320023|ref|XP_010670583.1| (PREDICTED: dr1-associated corepressor [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 463.8 bits (1192), Expect = 2.200e-127
Identity = 250/288 (86.81%), Postives = 264/288 (91.67%), Query Frame = 1 

		  

Query: 1   MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPVLVSKALELFLQDLCDRTYDITLQRGAK 60
           MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPVLVSKALELFLQDLCDRTYDITLQRGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPVLVSKALELFLQDLCDRTYDITLQRGAK 60

Query: 61  TMSSLHLKHCIHSFSMFDFLKDVVSKVPDYGNSDANADDRTATKRRKSAVDEYHDSDEEL 120
           TMSSLHLK+CIHSFSMFDFLKDVVSKVPDYGNSDANADDRTA KRRKSAVDEYHDSDE+ 
Sbjct: 61  TMSSLHLKNCIHSFSMFDFLKDVVSKVPDYGNSDANADDRTAPKRRKSAVDEYHDSDEDS 120

Query: 121 KKSRMQEMSHASGSGRGRGRGRGRGRGRGRPPLEREAVSHHEMDAEPSTTFEPMNKPCPI 180
           KKSRMQE++HAS SGRGRGRGRGRGRGRGRPPLER+  SHHEM+AEPST+FEP+NKP PI
Sbjct: 121 KKSRMQEITHASSSGRGRGRGRGRGRGRGRPPLERDPPSHHEMEAEPSTSFEPINKPSPI 180

Query: 181 QVPNTDDDPNNKLDPMKESPVVGDGGDTAIRNFDLNAEVAADNQEMVPTVTAAAAAAAAE 240
           QVPNTDDDP NK DPMKESPVVGDGGD AIRNFDLNA V A+NQ++ PTVTAA  AA A 
Sbjct: 181 QVPNTDDDP-NKPDPMKESPVVGDGGDAAIRNFDLNAAV-AENQDIGPTVTAAENAAVAS 240

Query: 241 NDVASVEQPPPESKNDELVSEVDGMAIDPHQIAQFNSRIDEDEDYDEE 289
            D      P PESKN+ELVSEVDGMAIDPHQIAQFNSRI++DEDYDEE
Sbjct: 241 AD------PAPESKNEELVSEVDGMAIDPHQIAQFNSRIEDDEDYDEE 280
[Close]
BLAST of Spo04110.1 vs. NCBI nr
Match: gi|225464049|ref|XP_002268063.1| (PREDICTED: DNA polymerase epsilon subunit C [Vitis vinifera])

HSP 1 Score: 298.9 bits (764), Expect = 9.500e-78
Identity = 187/330 (56.67%), Postives = 225/330 (68.18%), Query Frame = 1 

		  

Query: 1   MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPVLVSKALELFLQDLCDRTYDITLQRGAK 60
           MRKKLDTRFPAARIKKIMQADEDVGKIA+AVPVLVSKALELFLQDLCDRTYDITLQRGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYDITLQRGAK 60

Query: 61  TMSSLHLKHCIHSFSMFDFLKDVVSKVPDYGNSDANADDRTATKRRKSAVDEYHDSDEEL 120
           TMSSLHLKHC+   ++FDFL+D+VSKVPDYG++DA  DDRT +KRRK+A DE+++SDEE 
Sbjct: 61  TMSSLHLKHCVQRHNVFDFLRDIVSKVPDYGHADAAGDDRTMSKRRKAAGDEFNESDEET 120

Query: 121 KKSRMQEMSHASGSGRGRGRGRGRGRGRGRPPLEREAVSHHEMDAEPSTTFEPMNKPCP- 180
           K+SRM EMS  S SGRGRGRGRGRGRGRG   +ERE V  H+++++P T+    +K  P 
Sbjct: 121 KRSRMHEMSPVSSSGRGRGRGRGRGRGRGSRAIEREPVP-HDVESDPCTSLPHSSKHDPN 180

Query: 181 --IQVPNTDDDPNNKLDPMKESPVVGDGGDTAIRNFDLNAEVAADNQEMV---------- 240
               +PN  +      + +K++  V DG +  +RNFDLNA V  D    V          
Sbjct: 181 LGRPIPNISESK----ELVKDNTAVSDGANPVVRNFDLNANVDEDVTATVATKATAAPAV 240

Query: 241 ----PTVTAAAAAAA-----AENDVASVEQPPP----------------ESKNDEL---- 289
               P   AAAAAAA     A    A+V  P P                E+K++E     
Sbjct: 241 LAPAPAAAAAAAAAAPAAAPAPAPAAAVPAPAPAPAAVDVRDSSAETATEAKHEEYPGWS 300
[Close]
BLAST of Spo04110.1 vs. NCBI nr
Match: gi|590568363|ref|XP_007010771.1| (Nuclear factor Y isoform 1 [Theobroma cacao])

HSP 1 Score: 295.4 bits (755), Expect = 1.100e-76
Identity = 183/302 (60.60%), Postives = 220/302 (72.85%), Query Frame = 1 

		  

Query: 1   MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPVLVSKALELFLQDLCDRTYDITLQRGAK 60
           MRKKLDTRFPAARIKKIMQADEDVGKIA+AVPVLVSKALELFLQDLCDRTY+ITLQRGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 60

Query: 61  TMSSLHLKHCIHSFSMFDFLKDVVSKVPDY--GNSDANADDRTATKRRKSAVDEYHDSDE 120
           TMSSLHLKHC+ S+++FDFL+D+VS+VPDY  G+SDA ADDRT +KRRK+A DE +DSDE
Sbjct: 61  TMSSLHLKHCVQSYNVFDFLRDIVSRVPDYGHGHSDAGADDRTISKRRKAAGDEGNDSDE 120

Query: 121 ELKKSRMQEMSHASGSGRGRGRGRGRGRGRGRPPLEREAVSHHEMDAEPSTTFEPMNKPC 180
           E K+SRM ++ HA  SGRGRGRGRGRGRGRG   +ER+  SH E++ EP    +  NK  
Sbjct: 121 ESKRSRMHDVGHAGTSGRGRGRGRGRGRGRGARNVERD--SHRELEPEPCQPLQHSNKSL 180

Query: 181 PIQVPNTDDDPNNKLDPMKESPVVGDGGDTAIRNFDLNAEV-------AADNQEMVPTVT 240
                  DD   +K + MKE+  +G+  + A+RNFDLNAEV       A+         T
Sbjct: 181 STPGMVIDDGSESK-ELMKEN-TIGEDANQAVRNFDLNAEVDENVDTKASAGASAAAATT 240

Query: 241 AAAAAAAAENDVASVEQPPPESKNDEL----VSEVDGMAIDPHQIAQFNSRIDED-EDYD 289
           A A AAAA     S  +P  E+K++E     +SE+D MAIDP Q+AQ   R+DED EDYD
Sbjct: 241 ATATAAAAAQ--PSSAEPTTETKHEEYPGWSLSEMDKMAIDPLQLAQLGRRLDEDEEDYD 296
[Close]
BLAST of Spo04110.1 vs. NCBI nr
Match: gi|568834407|ref|XP_006471322.1| (PREDICTED: dr1-associated corepressor [Citrus sinensis])

HSP 1 Score: 293.1 bits (749), Expect = 5.200e-76
Identity = 179/291 (61.51%), Postives = 213/291 (73.20%), Query Frame = 1 

		  

Query: 1   MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPVLVSKALELFLQDLCDRTYDITLQRGAK 60
           MRKKLDTRFPAARIKKIMQADEDVGKIA+AVPVLVSKALELFLQDLCDRTY+ITLQRGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 60

Query: 61  TMSSLHLKHCIHSFSMFDFLKDVVSKVPDY--GNSDANADDRTATKRRKSAVDEYHDSDE 120
           TMSSLHLKHC+ S+++FDFL+D+VS+VPDY  G+SDA ++DR+ +KRRK+A DE +DSDE
Sbjct: 61  TMSSLHLKHCVQSYNVFDFLRDIVSRVPDYSHGHSDATSEDRSISKRRKAAGDECNDSDE 120

Query: 121 ELKKSRMQEMSHASGSGRGRGRGRGRGRGRGRPPLEREAVSHHEMDAEPSTTFEPMNKPC 180
           E K+SRM EM H +GSGRGRGRGRGRGRGRG   LERE+ SH E++ EP T  +      
Sbjct: 121 ESKRSRMHEMGHVTGSGRGRGRGRGRGRGRGARHLERES-SHREVEPEPRTAPQHGASDN 180

Query: 181 PIQVPNTDDDPNNKLDPMKESPVVGDGGDTAIRNFDLNAEVAADNQEMVPTVTAAAAAAA 240
              +   D+   +K  P KE+ +  DG + A RNFDLN    AD  E V T TAA AA  
Sbjct: 181 SNSIMLVDNASESKEQP-KENVIASDGVNPAARNFDLN----ADLDENVDTKTAAPAAPT 240

Query: 241 AENDVASVEQPPPESKNDELVSEVDGMAIDPHQIAQFNSRID-EDEDYDEE 289
             +     E+   E      +SE+D MAIDP QIA  + RID E+EDYDEE
Sbjct: 241 QPSSAGPSEETKHEEYPGWSLSEMDRMAIDPLQIANLSRRIDEEEEDYDEE 285
[Close]
BLAST of Spo04110.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RC39_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_083410 PE=4 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 5.700e-154
Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 1 

		  

Query: 1   MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPVLVSKALELFLQDLCDRTYDITLQRGAK 60
           MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPVLVSKALELFLQDLCDRTYDITLQRGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPVLVSKALELFLQDLCDRTYDITLQRGAK 60

Query: 61  TMSSLHLKHCIHSFSMFDFLKDVVSKVPDYGNSDANADDRTATKRRKSAVDEYHDSDEEL 120
           TMSSLHLKHCIHSFSMFDFLKDVVSKVPDYGNSDANADDRTATKRRKSAVDEYHDSDEEL
Sbjct: 61  TMSSLHLKHCIHSFSMFDFLKDVVSKVPDYGNSDANADDRTATKRRKSAVDEYHDSDEEL 120

Query: 121 KKSRMQEMSHASGSGRGRGRGRGRGRGRGRPPLEREAVSHHEMDAEPSTTFEPMNKPCPI 180
           KKSRMQEMSHASGSGRGRGRGRGRGRGRGRPPLEREAVSHHEMDAEPSTTFEPMNKPCPI
Sbjct: 121 KKSRMQEMSHASGSGRGRGRGRGRGRGRGRPPLEREAVSHHEMDAEPSTTFEPMNKPCPI 180

Query: 181 QVPNTDDDPNNKLDPMKESPVVGDGGDTAIRNFDLNAEVAADNQEMVPTVTAAAAAAAAE 240
           QVPNTDDDPNNKLDPMKESPVVGDGGDTAIRNFDLNAEVAADNQEMVPTVTAAAAAAAAE
Sbjct: 181 QVPNTDDDPNNKLDPMKESPVVGDGGDTAIRNFDLNAEVAADNQEMVPTVTAAAAAAAAE 240

Query: 241 NDVASVEQPPPESKNDELVSEVDGMAIDPHQIAQFNSRIDEDEDYDEE 289
           NDVASVEQPPPESKNDELVSEVDGMAIDPHQIAQFNSRIDEDEDYDEE
Sbjct: 241 NDVASVEQPPPESKNDELVSEVDGMAIDPHQIAQFNSRIDEDEDYDEE 288
[Close]
BLAST of Spo04110.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CTH5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g042360 PE=4 SV=1)

HSP 1 Score: 463.8 bits (1192), Expect = 1.600e-127
Identity = 250/288 (86.81%), Postives = 264/288 (91.67%), Query Frame = 1 

		  

Query: 1   MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPVLVSKALELFLQDLCDRTYDITLQRGAK 60
           MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPVLVSKALELFLQDLCDRTYDITLQRGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPVLVSKALELFLQDLCDRTYDITLQRGAK 60

Query: 61  TMSSLHLKHCIHSFSMFDFLKDVVSKVPDYGNSDANADDRTATKRRKSAVDEYHDSDEEL 120
           TMSSLHLK+CIHSFSMFDFLKDVVSKVPDYGNSDANADDRTA KRRKSAVDEYHDSDE+ 
Sbjct: 61  TMSSLHLKNCIHSFSMFDFLKDVVSKVPDYGNSDANADDRTAPKRRKSAVDEYHDSDEDS 120

Query: 121 KKSRMQEMSHASGSGRGRGRGRGRGRGRGRPPLEREAVSHHEMDAEPSTTFEPMNKPCPI 180
           KKSRMQE++HAS SGRGRGRGRGRGRGRGRPPLER+  SHHEM+AEPST+FEP+NKP PI
Sbjct: 121 KKSRMQEITHASSSGRGRGRGRGRGRGRGRPPLERDPPSHHEMEAEPSTSFEPINKPSPI 180

Query: 181 QVPNTDDDPNNKLDPMKESPVVGDGGDTAIRNFDLNAEVAADNQEMVPTVTAAAAAAAAE 240
           QVPNTDDDP NK DPMKESPVVGDGGD AIRNFDLNA V A+NQ++ PTVTAA  AA A 
Sbjct: 181 QVPNTDDDP-NKPDPMKESPVVGDGGDAAIRNFDLNAAV-AENQDIGPTVTAAENAAVAS 240

Query: 241 NDVASVEQPPPESKNDELVSEVDGMAIDPHQIAQFNSRIDEDEDYDEE 289
            D      P PESKN+ELVSEVDGMAIDPHQIAQFNSRI++DEDYDEE
Sbjct: 241 AD------PAPESKNEELVSEVDGMAIDPHQIAQFNSRIEDDEDYDEE 280
[Close]
BLAST of Spo04110.1 vs. UniProtKB/TrEMBL
Match: F6HV97_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0084g00040 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 6.600e-78
Identity = 187/330 (56.67%), Postives = 225/330 (68.18%), Query Frame = 1 

		  

Query: 1   MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPVLVSKALELFLQDLCDRTYDITLQRGAK 60
           MRKKLDTRFPAARIKKIMQADEDVGKIA+AVPVLVSKALELFLQDLCDRTYDITLQRGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYDITLQRGAK 60

Query: 61  TMSSLHLKHCIHSFSMFDFLKDVVSKVPDYGNSDANADDRTATKRRKSAVDEYHDSDEEL 120
           TMSSLHLKHC+   ++FDFL+D+VSKVPDYG++DA  DDRT +KRRK+A DE+++SDEE 
Sbjct: 61  TMSSLHLKHCVQRHNVFDFLRDIVSKVPDYGHADAAGDDRTMSKRRKAAGDEFNESDEET 120

Query: 121 KKSRMQEMSHASGSGRGRGRGRGRGRGRGRPPLEREAVSHHEMDAEPSTTFEPMNKPCP- 180
           K+SRM EMS  S SGRGRGRGRGRGRGRG   +ERE V  H+++++P T+    +K  P 
Sbjct: 121 KRSRMHEMSPVSSSGRGRGRGRGRGRGRGSRAIEREPVP-HDVESDPCTSLPHSSKHDPN 180

Query: 181 --IQVPNTDDDPNNKLDPMKESPVVGDGGDTAIRNFDLNAEVAADNQEMV---------- 240
               +PN  +      + +K++  V DG +  +RNFDLNA V  D    V          
Sbjct: 181 LGRPIPNISESK----ELVKDNTAVSDGANPVVRNFDLNANVDEDVTATVATKATAAPAV 240

Query: 241 ----PTVTAAAAAAA-----AENDVASVEQPPP----------------ESKNDEL---- 289
               P   AAAAAAA     A    A+V  P P                E+K++E     
Sbjct: 241 LAPAPAAAAAAAAAAPAAAPAPAPAAAVPAPAPAPAAVDVRDSSAETATEAKHEEYPGWS 300
[Close]
BLAST of Spo04110.1 vs. UniProtKB/TrEMBL
Match: A0A061FR83_THECC (Nuclear factor Y isoform 1 OS=Theobroma cacao GN=TCM_044728 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 7.300e-77
Identity = 183/302 (60.60%), Postives = 220/302 (72.85%), Query Frame = 1 

		  

Query: 1   MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPVLVSKALELFLQDLCDRTYDITLQRGAK 60
           MRKKLDTRFPAARIKKIMQADEDVGKIA+AVPVLVSKALELFLQDLCDRTY+ITLQRGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 60

Query: 61  TMSSLHLKHCIHSFSMFDFLKDVVSKVPDY--GNSDANADDRTATKRRKSAVDEYHDSDE 120
           TMSSLHLKHC+ S+++FDFL+D+VS+VPDY  G+SDA ADDRT +KRRK+A DE +DSDE
Sbjct: 61  TMSSLHLKHCVQSYNVFDFLRDIVSRVPDYGHGHSDAGADDRTISKRRKAAGDEGNDSDE 120

Query: 121 ELKKSRMQEMSHASGSGRGRGRGRGRGRGRGRPPLEREAVSHHEMDAEPSTTFEPMNKPC 180
           E K+SRM ++ HA  SGRGRGRGRGRGRGRG   +ER+  SH E++ EP    +  NK  
Sbjct: 121 ESKRSRMHDVGHAGTSGRGRGRGRGRGRGRGARNVERD--SHRELEPEPCQPLQHSNKSL 180

Query: 181 PIQVPNTDDDPNNKLDPMKESPVVGDGGDTAIRNFDLNAEV-------AADNQEMVPTVT 240
                  DD   +K + MKE+  +G+  + A+RNFDLNAEV       A+         T
Sbjct: 181 STPGMVIDDGSESK-ELMKEN-TIGEDANQAVRNFDLNAEVDENVDTKASAGASAAAATT 240

Query: 241 AAAAAAAAENDVASVEQPPPESKNDEL----VSEVDGMAIDPHQIAQFNSRIDED-EDYD 289
           A A AAAA     S  +P  E+K++E     +SE+D MAIDP Q+AQ   R+DED EDYD
Sbjct: 241 ATATAAAAAQ--PSSAEPTTETKHEEYPGWSLSEMDKMAIDPLQLAQLGRRLDEDEEDYD 296
[Close]
BLAST of Spo04110.1 vs. UniProtKB/TrEMBL
Match: V4SXS0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002081mg PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 8.100e-76
Identity = 179/291 (61.51%), Postives = 212/291 (72.85%), Query Frame = 1 

		  

Query: 1   MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPVLVSKALELFLQDLCDRTYDITLQRGAK 60
           MRKKLDTRFPAARIKKIMQADEDVGKIA+AVPVLVSKALELFLQDLCDRTY+ITLQRGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK 60

Query: 61  TMSSLHLKHCIHSFSMFDFLKDVVSKVPDY--GNSDANADDRTATKRRKSAVDEYHDSDE 120
           TMSSLHLKHC+ S+++FDFL+D+VS+VPDY  G+SDA ++DR+ +KRRK+A DE +DSDE
Sbjct: 61  TMSSLHLKHCVQSYNVFDFLRDIVSRVPDYSHGHSDATSEDRSISKRRKAAGDECNDSDE 120

Query: 121 ELKKSRMQEMSHASGSGRGRGRGRGRGRGRGRPPLEREAVSHHEMDAEPSTTFEPMNKPC 180
           E K+SRM EM H +GSGRGRGRGRGRGRGRG   LERE+ SH E++ EP T  +      
Sbjct: 121 ESKRSRMHEMGHVTGSGRGRGRGRGRGRGRGARHLERES-SHREVEPEPRTAPQHGASDN 180

Query: 181 PIQVPNTDDDPNNKLDPMKESPVVGDGGDTAIRNFDLNAEVAADNQEMVPTVTAAAAAAA 240
                  D+   +K  P KE+ +  DG + A RNFDLN    AD  E V T TAA AA  
Sbjct: 181 SNSTMLVDNASESKEQP-KENVIASDGVNPATRNFDLN----ADLDENVDTKTAAPAAPT 240

Query: 241 AENDVASVEQPPPESKNDELVSEVDGMAIDPHQIAQFNSRID-EDEDYDEE 289
             +     E+   E      +SE+D MAIDP QIA  + RID E+EDYDEE
Sbjct: 241 QPSSAGPSEETKHEEYPGWSLSEMDRMAIDPLQIANLSRRIDEEEEDYDEE 285
[Close]
BLAST of Spo04110.1 vs. ExPASy Swiss-Prot
Match: NC2A_HUMAN (Dr1-associated corepressor OS=Homo sapiens GN=DRAP1 PE=1 SV=3)

HSP 1 Score: 107.8 bits (268), Expect = 2.000e-22
Identity = 56/106 (52.83%), Postives = 73/106 (68.87%), Query Frame = 1 

		  

Query: 2   RKKLDTRFPAARIKKIMQADEDVGKIAMAVPVLVSKALELFLQDLCDRTYDITLQRGAKT 61
           +KK + RFP ARIKKIMQ DE++GK+A AVPV++S+ALELFL+ L  +   +T  R AKT
Sbjct: 5   KKKYNARFPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKT 64

Query: 62  MSSLHLKHCIHSFSMFDFLKDVVSKVPD-YGNSDANADDRTATKRR 107
           M++ HLK CI     FDFLKD+V+ VPD  G+ + N  D     RR
Sbjct: 65  MTTSHLKQCIELEQQFDFLKDLVASVPDMQGDGEDNHMDGDKGARR 110
[Close]
BLAST of Spo04110.1 vs. ExPASy Swiss-Prot
Match: NC2A_RAT (Dr1-associated corepressor OS=Rattus norvegicus GN=Drap1 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 6.900e-20
Identity = 67/184 (36.41%), Postives = 93/184 (50.54%), Query Frame = 1 

		  

Query: 2   RKKLDTRFPAARIKKIMQADEDVGKIAMAVPVLVSKALELFLQDLCDRTYDITLQRGAKT 61
           +KK + RFP ARIKKIMQ DE++GK+A AVPV++S+ALELFL+ L  +   +T  R AKT
Sbjct: 5   KKKYNARFPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKT 64

Query: 62  MSSLHLKHCIHSFSMFDFLKDVVSKVPDY--GNSDANADDRTATKRRKSAVDEYHDSDEE 121
           M++ HLK CI     FDFLKD+V+ VPD      D + D     +R +        +   
Sbjct: 65  MTTSHLKQCIELEQQFDFLKDLVASVPDMQGDGEDNHTDGDKGPRRGRKPGSSGRKNGGT 124

Query: 122 LKKSRMQEMSHASGSGRGRGRGR---GRGRGRGRPPLEREAVSHHEMDAEPSTTFEPMNK 181
             KS+ +++S                G       PP      +H +    P T F P   
Sbjct: 125 GSKSKDKKLSGTDSEQEDESEDTDTDGEEETPQAPPQASHPPAHFQ---SPPTPFMPFTS 184
[Close]
BLAST of Spo04110.1 vs. ExPASy Swiss-Prot
Match: NC2A_MOUSE (Dr1-associated corepressor OS=Mus musculus GN=Drap1 PE=1 SV=3)

HSP 1 Score: 99.0 bits (245), Expect = 9.100e-20
Identity = 65/181 (35.91%), Postives = 90/181 (49.72%), Query Frame = 1 

		  

Query: 2   RKKLDTRFPAARIKKIMQADEDVGKIAMAVPVLVSKALELFLQDLCDRTYDITLQRGAKT 61
           +KK + RFP ARIKKIMQ DE++GK+A AVPV++S+ALELFL+ L  +   +T  R AKT
Sbjct: 5   KKKYNARFPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKT 64

Query: 62  MSSLHLKHCIHSFSMFDFLKDVVSKVPDY--GNSDANADDRTATKRRKSAVDEYHDSDEE 121
           M++ HLK CI     FDFLKD+V+ VPD      D + D     +R +        +   
Sbjct: 65  MTTSHLKQCIELEQQFDFLKDLVASVPDMQGDGEDNHVDGDKGPRRGRKPGSSGRKNGGT 124

Query: 122 LKKSRMQEMSHASGSGRGRGRGRGRGRGRGRPPLEREAVSHHEMDAEPSTTFEPMNKPCP 181
             K + +++S                     P L  +A         P T F P   P P
Sbjct: 125 GSKGKDKKLSGTDSEQEDESEDTDTDGEEETPQLPPQASHPPAHFQSPPTPFIPFTSPLP 184
[Close]
BLAST of Spo04110.1 vs. ExPASy Swiss-Prot
Match: NC2A_DICDI (Dr1-associated corepressor homolog OS=Dictyostelium discoideum GN=drap1 PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 9.100e-20
Identity = 74/210 (35.24%), Postives = 102/210 (48.57%), Query Frame = 1 

		  

Query: 1   MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPVLVSKALELFLQDLCDRTYDITLQRGAK 60
           M+KK  T+FP ARIKKIMQ DE+VGKIA A P+L+S+ LELF+ DL  +T  IT  +  K
Sbjct: 1   MKKKYKTKFPMARIKKIMQKDEEVGKIASATPILISQCLELFMADLVMKTCKITQAKKGK 60

Query: 61  TMSSLHLKHCIHSFSMFDFLKDVVSKVPDYGN-----------SDANADDRTATKRRKSA 120
            +S  HLK CI   S FDFL ++V ++PD  N            D   ++    +     
Sbjct: 61  VISVNHLKECIKQESTFDFLTEIVDRIPDDKNEKRGRPKKTEGEDGGEEEEEEEEEMDMG 120

Query: 121 VDEYHDSDEELKKSRMQEMSHASGSGRGRGRGRGRGRGRGRPPLEREAVSHHEMDAEPS- 180
            +E  + DE+   S  +E       G+G   G+G   GRG     R   S  ++ +E S 
Sbjct: 121 EEEEEEEDEDDDDSDEEEEEAPKKGGKGSRGGKGSRGGRGG---ARGGASTRKVKSETSP 180

Query: 181 -------TTFEPMNKPCPIQVPNTDDDPNN 192
                  TT      P P   PN  + P +
Sbjct: 181 VLKNTTITTTTATTTPTPTPTPNFANSPKD 207
[Close]
BLAST of Spo04110.1 vs. ExPASy Swiss-Prot
Match: NC2A_BOVIN (Dr1-associated corepressor OS=Bos taurus GN=DRAP1 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.500e-19
Identity = 74/203 (36.45%), Postives = 103/203 (50.74%), Query Frame = 1 

		  

Query: 2   RKKLDTRFPAARIKKIMQADEDVGKIAMAVPVLVSKALELFLQDLCDRTYDITLQRGAKT 61
           +KK + RFP ARIKKIMQ DE++GK+A AVPV++S+ALELFL+ L  +   +T  R AKT
Sbjct: 5   KKKYNARFPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKT 64

Query: 62  MSSLHLKHCIHSFSMFDFLKDVVSKVPDYGNSDANADDRTATKRRKSAVDEYHDSDEELK 121
           M++ HLK CI     FDFLKD+V+ VPD                +    D + D D+  +
Sbjct: 65  MTTSHLKQCIELEQQFDFLKDLVASVPD---------------MQGDGEDNHMDGDKGPR 124

Query: 122 KSRMQEMSHASGSGRGRGRGRGRGRGRGRPPLEREAVSHH-EMDAEPSTTFEP---MNKP 181
           + R    S +SG   G    +G+ +       E+E  S   + D E  T   P    + P
Sbjct: 125 RGR---KSGSSGRKNGGMGSKGKDKKLSGTDSEQEDESEDTDSDGEEETPQVPPQASHPP 184

Query: 182 CPIQVPNTDDDPNNKLDPMKESP 201
              Q P T   P     P+  +P
Sbjct: 185 AHFQSPPTPFMPFTSTLPVPPAP 189
[Close]
BLAST of Spo04110.1 vs. TAIR (Arabidopsis)
Match: AT3G12480.1 (nuclear factor Y, subunit C11)

HSP 1 Score: 222.6 bits (566), Expect = 3.100e-58
Identity = 154/309 (49.84%), Postives = 187/309 (60.52%), Query Frame = 1 

		  

Query: 1   MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPVLVSKALELFLQDLCDRTYDITLQRGAK 60
           MRKKLDTRFPAARIKKIMQADEDVGKIA+AVPVLVSK+LELFLQDLCDRTY+ITL+RGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKSLELFLQDLCDRTYEITLERGAK 60

Query: 61  TMSSLHLKHCIHSFSMFDFLKDVVSKVPDYGNS------DANADDRTATKRRKSAVDEYH 120
           T+SSLHLKHC+  +++FDFL++VVSKVPDYG+S      D   DDR+ +KRRK   DE +
Sbjct: 61  TVSSLHLKHCVERYNVFDFLREVVSKVPDYGHSQGQGHGDVTMDDRSISKRRKPISDEVN 120

Query: 121 DSDEELKKSRMQEMSHASGSGRGRGRGRGRGRGRG---RPPLEREAVSHHEMDAEPSTTF 180
           DSDEE KKS+ QE+  A  SGRG GRGRGRGRGRG       ERE + + EM+ E + + 
Sbjct: 121 DSDEEYKKSKTQEIGSAKTSGRG-GRGRGRGRGRGGRAAKAAEREGL-NREMEVEAANSG 180

Query: 181 EP-----------MNKPCPIQVPNTDDDPNNKLDPMKESPVVGDGGDTAIRNFDLNAEVA 240
           +P            + P   +    D    +  D  +      +G D     FDLNAE  
Sbjct: 181 QPPPEDNVKMHASESSPQEDEKKGIDGTAASNEDTKQHLQSPKEGID-----FDLNAESL 240

Query: 241 ADNQEMVPTVTAAAAAAAAENDVASVEQPPPESKNDELVSEVDGMAIDPHQIAQFNSRID 289
             N+  +   T       A  D       P           +D   +DP Q+A    RID
Sbjct: 241 DLNETKLAPATGTTTTTTAATDSEEYSGWP----------MMDISKMDPAQLASLGKRID 292
[Close]
BLAST of Spo04110.1 vs. TAIR (Arabidopsis)
Match: AT5G19490.1 (Histone superfamily protein)

HSP 1 Score: 170.6 bits (431), Expect = 1.400e-42
Identity = 125/291 (42.96%), Postives = 166/291 (57.04%), Query Frame = 1 

		  

Query: 1   MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPVLVSKALELFLQDLCDRTYDITLQRGAK 60
           M+KKL TRFPA RIKKIMQ DE+VGKIAMAVP+LVSKALELFLQDLC+ TYD+TL RGAK
Sbjct: 1   MKKKLQTRFPATRIKKIMQTDEEVGKIAMAVPLLVSKALELFLQDLCNHTYDVTLSRGAK 60

Query: 61  TMSSLHLKHCIHSFSMFDFLKDVVSKVPDYGNSDANADDRTATKRRKSAVDEYHDSDEEL 120
           T+++ HLK C+ + ++FDFL+D V+KVPD G SD   +D++ATKRRK       + ++ +
Sbjct: 61  TVNAFHLKQCVQATNVFDFLRDTVAKVPDLGGSD--TEDQSATKRRKVVDGSSCNDEDMI 120

Query: 121 KKSRMQEMSHASGSGRGRGRGRGRGRGRGRPPLEREAVSHHEM-DAEPSTTFEPMNKPCP 180
           K ++M E+ H S  GRGR RGRGRGR  GR           ++ D  P    E    P P
Sbjct: 121 KTTQMHEVKHTS-CGRGR-RGRGRGRSSGRTGSGLSLKFEEDLEDGSP----ESSRTPSP 180

Query: 181 IQVPNTDDDPNNKLDPMKESPVVGDGGDTAIRNFDLNAEV--AADNQEMVPTVTAAAAAA 240
                + DD + K      +       +  +RNFDLN E+    DN   + T        
Sbjct: 181 ENGSLSHDDTSWK-KVASHNNHHSSNSEVKVRNFDLNVELDENGDNATWLET-------- 240

Query: 241 AAENDVASVEQPPPESKNDELVSEVDGMAIDPHQIAQFNSRIDEDEDYDEE 289
                   +E+ P      +   E++ M IDP    Q  +   ++EDYDEE
Sbjct: 241 -------QLERSP------DYPLEINEMKIDPDD--QQQASASDEEDYDEE 259
[Close]
BLAST of Spo04110.1 vs. TAIR (Arabidopsis)
Match: AT1G56170.1 (nuclear factor Y, subunit C2)

HSP 1 Score: 58.2 bits (139), Expect = 1.000e-8
Identity = 30/77 (38.96%), Postives = 46/77 (59.74%), Query Frame = 1 

		  

Query: 10  PAARIKKIMQADEDVGKIAMAVPVLVSKALELFLQDLCDRTYDITLQRGAKTMSSLHLKH 69
           P ARIKKIM+ADEDV  I+   PV+ +KA E+F+ +L  R +  T +   +T+    +  
Sbjct: 78  PLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAA 137

Query: 70  CIHSFSMFDFLKDVVSK 87
            I    +FDFL D++ +
Sbjct: 138 AISRTDVFDFLVDIIPR 154
[Close]
BLAST of Spo04110.1 vs. TAIR (Arabidopsis)
Match: AT5G63470.1 (nuclear factor Y, subunit C4)

HSP 1 Score: 58.2 bits (139), Expect = 1.000e-8
Identity = 31/79 (39.24%), Postives = 47/79 (59.49%), Query Frame = 1 

		  

Query: 8   RFPAARIKKIMQADEDVGKIAMAVPVLVSKALELFLQDLCDRTYDITLQRGAKTMSSLHL 67
           + P ARIKKIM+ADEDV  I+   P+L +KA ELF+ +L  R++    +   +T+    +
Sbjct: 78  QLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDI 137

Query: 68  KHCIHSFSMFDFLKDVVSK 87
              I    +FDFL D+V +
Sbjct: 138 AAAITRTDIFDFLVDIVPR 156
[Close]
BLAST of Spo04110.1 vs. TAIR (Arabidopsis)
Match: AT3G48590.1 (nuclear factor Y, subunit C1)

HSP 1 Score: 58.2 bits (139), Expect = 1.000e-8
Identity = 31/79 (39.24%), Postives = 47/79 (59.49%), Query Frame = 1 

		  

Query: 8   RFPAARIKKIMQADEDVGKIAMAVPVLVSKALELFLQDLCDRTYDITLQRGAKTMSSLHL 67
           + P ARIKKIM+ADEDV  I+   P+L +KA ELF+ +L  R++    +   +T+    +
Sbjct: 65  QLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDI 124

Query: 68  KHCIHSFSMFDFLKDVVSK 87
              I    +FDFL D+V +
Sbjct: 125 AAAITRTDIFDFLVDIVPR 143
The following BLAST results are available for this feature:
BLAST of Spo04110.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902212730|gb|KNA17068.1|8.2e-154100.hypothetical protein SOVF_0834... [more]
gi|731320023|ref|XP_010670583.1|2.2e-12786.8PREDICTED: dr1-associated core... [more]
gi|225464049|ref|XP_002268063.1|9.5e-7856.6PREDICTED: DNA polymerase epsi... [more]
gi|590568363|ref|XP_007010771.1|1.1e-7660.6Nuclear factor Y isoform 1 [Th... [more]
gi|568834407|ref|XP_006471322.1|5.2e-7661.5PREDICTED: dr1-associated core... [more]
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BLAST of Spo04110.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RC39_SPIOL5.7e-154100.Uncharacterized protein OS=Spi... [more]
A0A0J8CTH5_BETVU1.6e-12786.8Uncharacterized protein OS=Bet... [more]
F6HV97_VITVI6.6e-7856.6Putative uncharacterized prote... [more]
A0A061FR83_THECC7.3e-7760.6Nuclear factor Y isoform 1 OS=... [more]
V4SXS0_9ROSI8.1e-7661.5Uncharacterized protein OS=Cit... [more]
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BLAST of Spo04110.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
NC2A_HUMAN2.0e-2252.8Dr1-associated corepressor OS=... [more]
NC2A_RAT6.9e-2036.4Dr1-associated corepressor OS=... [more]
NC2A_MOUSE9.1e-2035.9Dr1-associated corepressor OS=... [more]
NC2A_DICDI9.1e-2035.2Dr1-associated corepressor hom... [more]
NC2A_BOVIN1.5e-1936.4Dr1-associated corepressor OS=... [more]
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BLAST of Spo04110.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT3G12480.13.1e-5849.8nuclear factor Y, subunit C11[more]
AT5G19490.11.4e-4242.9Histone superfamily protein[more]
AT1G56170.11.0e-838.9nuclear factor Y, subunit C2[more]
AT5G63470.11.0e-839.2nuclear factor Y, subunit C4[more]
AT3G48590.11.0e-839.2nuclear factor Y, subunit C1[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003958Transcription factor CBF/NF-Y/archaeal histone domainPFAMPF00808CBFD_NFYB_HMFcoord: 8..71
score: 1.7
IPR009072Histone-foldGENE3D1.10.20.10coord: 3..72
score: 3.1
IPR009072Histone-foldunknownSSF47113Histone-foldcoord: 3..89
score: 2.37
NoneNo IPR availablePANTHERPTHR10252HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATEDcoord: 2..274
score: 2.6E
NoneNo IPR availablePANTHERPTHR10252:SF40SUBFAMILY NOT NAMEDcoord: 2..274
score: 2.6E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051321 meiotic cell cycle
biological_process GO:0010267 production of ta-siRNAs involved in RNA interference
biological_process GO:0006468 protein phosphorylation
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0008152 metabolic process
biological_process GO:0051301 cell division
biological_process GO:0051607 defense response to virus
biological_process GO:0006281 DNA repair
biological_process GO:0007064 mitotic sister chromatid cohesion
biological_process GO:0035196 production of miRNAs involved in gene silencing by miRNA
cellular_component GO:0005819 spindle
cellular_component GO:0009506 plasmodesma
cellular_component GO:0016363 nuclear matrix
cellular_component GO:0005737 cytoplasm
cellular_component GO:0008278 cohesin complex
cellular_component GO:0000775 chromosome, centromeric region
cellular_component GO:0044424 intracellular part
cellular_component GO:0000785 chromatin
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004386 helicase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003682 chromatin binding
molecular_function GO:0005515 protein binding
RNA-Seq Expression