Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGAATACAAGAAATCGTTCGTCTCGCAAATCCATCTCTTCTTCTCTTTTAAAACTTCTACATTAAGCAAAAACGAAGGCAAAATCTTCTATAAATCTATGTTGAGCATCTTCTTCCTCTGTCACCACTCTTCAACTCTCATTCCCTATCTCATTTTATCTATCCTCATCTTCTGTCATCAAGGATCAACAGGGTCTTGCATCGACTTTGAATCTGAACCGTCAATGGCTACTCTCGGTGGTTTGCGCGAATCCCAAGGTGCTTCCAATGATGCTGAGATTGAAAGCCTTGCCCGTTTTGCTGTCGACGAACACAACAAGAAAGAGGTTTACTAATTTTTTAAATTAAACGCTTTGTTTTTTTTTGCAGAATTTGAAGTTGCGCATTTCATAGTTTCGCATGTTTTACTGGTAATTTGTGGGTTTATTTTTTATTTTTTGATGTCCTGATTTTCTGCAAATTTTGATGGTACCCGGTTCATAGTTCTGTGTGATATTTTCTGGGATTTGGATTTTTCTGTTAACAGAATTTGAAGTTGCCCATTTCACAATTTTACAGGATTTACTGCTATATTTTGTTTTTTCTTGCCGATTCCTTTTTTTTTGAAGTTGGGGTTTGATCAGAAGATGCTTTGTTTTTCCCCTTTTTCTCACCCAATTACGATTTCGGTATCTTGATTTTTATGTTTTTTTTTCAATTGCTATGTTTAATTTTGGGATTTGACCTTCTTAGGTCTTGCATAATATTTGTGTCAAAAGTTGTTGCCCATTTTGGTTTTATTCTATAGTGTGAATAAGAGGAGTCGTCCCGGGTTTCATTGTTAGACTCATCTTAATTTGTGATATCAAGACATTACTAAAGATAATTAAAGATATTAGTGTTGAAAGTTATGTCTCCGACCGTAAACAAGGCAATTGGGTAAGTCTTTGGGAGGATGAAGAGTAATAAGTTTAATTTTTGTTGGTAGTTTTGGGTTTGTGAAAGGATTCACTTGACAATTGTTGTGCATATTACTCTTCTCACTTTTCTCTTTGTTTGAATGAAGAATGCCTTGCTGGAGTTTGCAAGGATTATAAAGGCAAAGGAACAGGTAGTTGCGGGTACGTTACATCACTTCACAATCGAAGCGATCGATTCTGGCAAGAAGAAGCTGTATGAAGCAAAAGTATGGGTGAAGCCATGGATGAACTTCAAGGAGCTTCAGGAATTCAAGCATACTGAGGAAAGCCATGCAATCACTTCTTCTGACCTTGGTGCTAATAAAGGTAATGATTAAGGTTCATAATTTTCGCCGAAAACTATTAGTGTTGTTGGATATAATAAGAAGAATCTCAACATATATGAATAGTAGTAGCTTGATCTTCAAGGTTGTAAATTCCCGTTTTATCATGACCAAGGGTTCCTTTAAGAAGAATGTTCGGAGGAACACTAGCAGCTTAACCTATGCTTTATTCATACACGATAGGCCTTATTTGAAATTATTGAATGAATAGCTCAAGACATCTTTCTAAAGGACTACATAGTGTGTATAGGCTCAAAGCTACTTGACTTGGATATTGTTGCTGTGATACTGTGAGTGGTTGTTTGCCACCCATCCATAATGACTACCCTGCTTTCTATGTGTTGCTATCTGAATTTGATTGTTTAGAAAGGTATCTTCTGGTGAGTGTATTGTCTACTCCTAGTCATATTTTTTTATAGAGACGCAGCTAACAGTTCGTGTTAAGTTGAGAGAGAGTGTGAATGTGTTGCTTTAATAGACGAATTCCACTTCCGTTTTATCCTTGTTTCTTCTTCTCGAGCGTGTAGCTCCCTTGAAGTGCAATAAATGCAAGACATTTCTCTTTAATGATAAATTTCAGGGTTGGATGTAATTTGGATTGAGATCAGGAATACCTCATGACATCTTTAACAAAATGCCTAATAGAAATGTGTGTCTTTTGTTATTGTCATGTTCAATGGAAATTGCCTGTCACAGATGATCCAGTATCATCCTTAATTCAGCTTTTGATTGTTCCGTTCTGGTTCTATGAAAAGAATACGACTGAAAAATATATGCTTCATTTTGTATTCTACCGTTCTACGTGGAGATTCGAGTTTTTTGGTTCTGAGCATGGAGACCAATCAATCAATTCTTCTGCAGAAAGAGAATTGCATTCTTTATCTGTTTATTGAAGCCACTAATAAACTGATTAATTTTGGAGTTCCATGAAGCATCTTTCATACATTATTTTTCCAATATGATCTAATGGTGTAATAAGTTGTGTTGTGTGGTCAATGAATCATCTTTCTTGTTTTTGTACTTCTAAGTGATTGTTAGCATGCTGGCACTAACCTATGGTTAAATGATCAATCAGAAGGACATGGCGCAGGATGGAAAGAAGTGCCAGTCCATGACCCTGAAGTGCAAAATGCAGCAAATCATGCTCTTCAGACCATACAGCAAAGATCCAACTCCTTATTCCCTTATGAACTGCAAGAAGTGTCTCATGCGAAGGCTGAGGTTCGTCCTTCTGTTACCTACTGACACTTTTTAGTTACTCTTTCTTTTCCTCCTCTACTTAGAGAAAGCTAGATGAAAAATATTCCATCCTTCATCAAGTAAATAGGTCACAGATGATTTTGAGCTAATTTTTCAAGAAACTTAGTGAAAATACCACACCTTCTGACTTTTAACGGCTTATCATATTCGACATTGACCTTTTTAAGGGTAATTTCAAAACCGCATTTACTAAATTTAGAATGTGACCTACTATTTGGGATTATGTGAGTAAAATTCTTGCTTTATTATTTTGGAACAGAGATAGTATATTCTTTTAATATCTTACACTTTATGAATTCGGAATAGCACAATACCAAAGATTTTGGTAATCCTTGAGTATTTTTATGTGAGTTGCACTTTCTAAAGTTGTCCGATTTAATATGAGTTACACTTCCTATTTTTTGGTATGTCATGGTATATTGGTATCTACTCCCAATTATATTTATCTTCCTCNTCAAAACCGCATTTACTAAATTTAGAATGTGACCTACTATTTGGGATTATGTGAGTAAAATTCTTGCTTTATTATTTTGGAACAGAGATAGTATATTCTTTTAATATCTTACACTTTATGAATTCGGAATAGCACAATACCAAAGATTTTGGTAATCCTTGAGTATTTTTATGTGAGTTACACTTTCTAAAGTTGTCCGATTTAATATGAGTTACACTTCCTATTTTTTGGTATGTCATGGTATATTGGTATCTACTCCCAATTATATTTATCTTCCTCTTCCTCTTCCTCATGGTTCAGCACTTTACATTTTCAATATGAGTTGCATTTTCTATCTTTGATATGTTGTGGTATCCACTCCCAATTAAATAATCTTATTTTTCACTCTTATCGTCTATGCACTTAATTTACATCCTCTTTTTTCCACAATAAATAATTAACTCACTGATAATAAATAATAACATACTACCCCACTTGCTGTTACTTAAATAATATCAACTCATTTTTTTAACATTCCGTATCTGTCAAACTGTGTAACTCATATTAAAATACGGAAAGAGTAATTAGATGTGAGGATTGGGATCAATTTTCATTAGTATATCCTGCCTCACTAATCCCTACTAGTTATTGACCCGAAGGAATTTGTTGATATAGGTGTGAGAATATACATATCTTGCACCCACTAGTTTTCATAGTTTTTCAAGTTTTGTGTAATTGTGGGCCTTGTGGCAACATGTGTTTGAAGTCTGATGTGAAAGTGGTTATATGACAGGTTGTGGATGACACTGCTAAGTTTAACCTGCACCTCAAAGTGAAGAGAGGAAACAAGGAGGAGAAATTTAATGTGGAGGTGCACAAAAACAGTCAAGGAAACTATAACCTTAATCAAATGGGAAACATCGAGCCTGAGTTCGAGAACAAGGAATGAGTTTTGGACTTCTTTGTTTGTTAATTAACTGTGACTGTGAGCACTTAGAATAGTATGTAATGAATGCAAGCTGACTTGCTCTGAGTATAATAAGCCTTGTCTTTTGTTACGGTTACACCGTCGTTTCTTCTATATGGATATTATAGAATTTATAGCTATGGATGTATATGAAATGGAGATTGCTATCTTGCTTTTAACAACTTCCCTACTCTGTTGAAATGCTGCCTTAACATGTTTATATTAGTTAAAGTGTTCTCTTGATTTTTGTTTAGGAAGATTTTAATTCTTCCGGCTTTGATTTCTTTGACTAAAAATCG ATGAAAGAATACAAGAAATCGTTCGTCTCGCAAATCCATCTCTTCTTCTCTTTTAAAACTTCTACATTAAGCAAAAACGAAGGCAAAATCTTCTATAAATCTATGTTGAGCATCTTCTTCCTCTGTCACCACTCTTCAACTCTCATTCCCTATCTCATTTTATCTATCCTCATCTTCTGTCATCAAGGATCAACAGGGTCTTGCATCGACTTTGAATCTGAACCGTCAATGGCTACTCTCGGTGGTTTGCGCGAATCCCAAGGTGCTTCCAATGATGCTGAGATTGAAAGCCTTGCCCGTTTTGCTGTCGACGAACACAACAAGAAAGAGAATGCCTTGCTGGAGTTTGCAAGGATTATAAAGGCAAAGGAACAGGTAGTTGCGGGTACGTTACATCACTTCACAATCGAAGCGATCGATTCTGGCAAGAAGAAGCTGTATGAAGCAAAAGTATGGGTGAAGCCATGGATGAACTTCAAGGAGCTTCAGGAATTCAAGCATACTGAGGAAAGCCATGCAATCACTTCTTCTGACCTTGGTGCTAATAAAGAAGGACATGGCGCAGGATGGAAAGAAGTGCCAGTCCATGACCCTGAAGTGCAAAATGCAGCAAATCATGCTCTTCAGACCATACAGCAAAGATCCAACTCCTTATTCCCTTATGAACTGCAAGAAGTGTCTCATGCGAAGGCTGAGGTTGTGGATGACACTGCTAAGTTTAACCTGCACCTCAAAGTGAAGAGAGGAAACAAGGAGGAGAAATTTAATGTGGAGGTGCACAAAAACAGTCAAGGAAACTATAACCTTAATCAAATGGGAAACATCGAGCCTGAGTTCGAGAACAAGGAATGAGTTTTGGACTTCTTTGTTTGTTAATTAACTGTGACTGTGAGCACTTAGAATAGTATGTAATGAATGCAAGCTGACTTGCTCTGAGTATAATAAGCCTTGTCTTTTGTTACGGTTACACCGTCGTTTCTTCTATATGGATATTATAGAATTTATAGCTATGGATGTATATGAAATGGAGATTGCTATCTTGCTTTTAACAACTTCCCTACTCTGTTGAAATGCTGCCTTAACATGTTTATATTAGTTAAAGTGTTCTCTTGATTTTTGTTTAGGAAGATTTTAATTCTTCCGGCTTTGATTTCTTTGACTAAAAATCG ATGAAAGAATACAAGAAATCGTTCGTCTCGCAAATCCATCTCTTCTTCTCTTTTAAAACTTCTACATTAAGCAAAAACGAAGGCAAAATCTTCTATAAATCTATGTTGAGCATCTTCTTCCTCTGTCACCACTCTTCAACTCTCATTCCCTATCTCATTTTATCTATCCTCATCTTCTGTCATCAAGGATCAACAGGGTCTTGCATCGACTTTGAATCTGAACCGTCAATGGCTACTCTCGGTGGTTTGCGCGAATCCCAAGGTGCTTCCAATGATGCTGAGATTGAAAGCCTTGCCCGTTTTGCTGTCGACGAACACAACAAGAAAGAGAATGCCTTGCTGGAGTTTGCAAGGATTATAAAGGCAAAGGAACAGGTAGTTGCGGGTACGTTACATCACTTCACAATCGAAGCGATCGATTCTGGCAAGAAGAAGCTGTATGAAGCAAAAGTATGGGTGAAGCCATGGATGAACTTCAAGGAGCTTCAGGAATTCAAGCATACTGAGGAAAGCCATGCAATCACTTCTTCTGACCTTGGTGCTAATAAAGAAGGACATGGCGCAGGATGGAAAGAAGTGCCAGTCCATGACCCTGAAGTGCAAAATGCAGCAAATCATGCTCTTCAGACCATACAGCAAAGATCCAACTCCTTATTCCCTTATGAACTGCAAGAAGTGTCTCATGCGAAGGCTGAGGTTGTGGATGACACTGCTAAGTTTAACCTGCACCTCAAAGTGAAGAGAGGAAACAAGGAGGAGAAATTTAATGTGGAGGTGCACAAAAACAGTCAAGGAAACTATAACCTTAATCAAATGGGAAACATCGAGCCTGAGTTCGAGAACAAGGAATGA MKEYKKSFVSQIHLFFSFKTSTLSKNEGKIFYKSMLSIFFLCHHSSTLIPYLILSILIFCHQGSTGSCIDFESEPSMATLGGLRESQGASNDAEIESLARFAVDEHNKKENALLEFARIIKAKEQVVAGTLHHFTIEAIDSGKKKLYEAKVWVKPWMNFKELQEFKHTEESHAITSSDLGANKEGHGAGWKEVPVHDPEVQNAANHALQTIQQRSNSLFPYELQEVSHAKAEVVDDTAKFNLHLKVKRGNKEEKFNVEVHKNSQGNYNLNQMGNIEPEFENKE Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo04116.1 vs. NCBI nr
Match: gi|902212731|gb|KNA17069.1| (hypothetical protein SOVF_083420 isoform A [Spinacia oleracea]) HSP 1 Score: 558.5 bits (1438), Expect = 6.600e-156 Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 1
BLAST of Spo04116.1 vs. NCBI nr
Match: gi|902212732|gb|KNA17070.1| (hypothetical protein SOVF_083420 isoform B [Spinacia oleracea]) HSP 1 Score: 552.4 bits (1422), Expect = 4.700e-154 Identity = 282/283 (99.65%), Postives = 282/283 (99.65%), Query Frame = 1
BLAST of Spo04116.1 vs. NCBI nr
Match: gi|110748606|gb|ABG89856.1| (cystatin [Amaranthus hypochondriacus]) HSP 1 Score: 398.7 bits (1023), Expect = 8.700e-108 Identity = 199/248 (80.24%), Postives = 224/248 (90.32%), Query Frame = 1
BLAST of Spo04116.1 vs. NCBI nr
Match: gi|731320021|ref|XP_010670580.1| (PREDICTED: cysteine proteinase inhibitor 6 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 383.3 bits (983), Expect = 3.800e-103 Identity = 190/222 (85.59%), Postives = 209/222 (94.14%), Query Frame = 1
BLAST of Spo04116.1 vs. NCBI nr
Match: gi|870866005|gb|KMT17034.1| (hypothetical protein BVRB_2g042350 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 365.5 bits (937), Expect = 8.200e-98 Identity = 179/204 (87.75%), Postives = 196/204 (96.08%), Query Frame = 1
BLAST of Spo04116.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RDK0_SPIOL (Cysteine proteinase inhibitor OS=Spinacia oleracea GN=SOVF_083420 PE=3 SV=1) HSP 1 Score: 558.5 bits (1438), Expect = 4.600e-156 Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 1
BLAST of Spo04116.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RC70_SPIOL (Cysteine proteinase inhibitor OS=Spinacia oleracea GN=SOVF_083420 PE=3 SV=1) HSP 1 Score: 552.4 bits (1422), Expect = 3.300e-154 Identity = 282/283 (99.65%), Postives = 282/283 (99.65%), Query Frame = 1
BLAST of Spo04116.1 vs. UniProtKB/TrEMBL
Match: Q0GPA4_AMAHP (Cysteine proteinase inhibitor OS=Amaranthus hypochondriacus GN=CPI PE=2 SV=1) HSP 1 Score: 398.7 bits (1023), Expect = 6.100e-108 Identity = 199/248 (80.24%), Postives = 224/248 (90.32%), Query Frame = 1
BLAST of Spo04116.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CY51_BETVU (Cysteine proteinase inhibitor OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g042350 PE=3 SV=1) HSP 1 Score: 365.5 bits (937), Expect = 5.700e-98 Identity = 179/204 (87.75%), Postives = 196/204 (96.08%), Query Frame = 1
BLAST of Spo04116.1 vs. UniProtKB/TrEMBL
Match: G7LID2_MEDTR (Cysteine proteinase inhibitor OS=Medicago truncatula GN=MTR_8g041410 PE=3 SV=1) HSP 1 Score: 303.1 bits (775), Expect = 3.500e-79 Identity = 150/230 (65.22%), Postives = 184/230 (80.00%), Query Frame = 1
BLAST of Spo04116.1 vs. ExPASy Swiss-Prot
Match: CYT12_ORYSJ (Cysteine proteinase inhibitor 12 OS=Oryza sativa subsp. japonica GN=Os01g0270100 PE=2 SV=1) HSP 1 Score: 267.3 bits (682), Expect = 1.900e-70 Identity = 126/193 (65.28%), Postives = 165/193 (85.49%), Query Frame = 1
BLAST of Spo04116.1 vs. ExPASy Swiss-Prot
Match: CYT6_ARATH (Cysteine proteinase inhibitor 6 OS=Arabidopsis thaliana GN=CYS6 PE=1 SV=2) HSP 1 Score: 266.2 bits (679), Expect = 4.200e-70 Identity = 141/238 (59.24%), Postives = 173/238 (72.69%), Query Frame = 1
BLAST of Spo04116.1 vs. ExPASy Swiss-Prot
Match: CYT7_ARATH (Cysteine proteinase inhibitor 7 OS=Arabidopsis thaliana GN=CYS7 PE=2 SV=2) HSP 1 Score: 203.8 bits (517), Expect = 2.600e-51 Identity = 105/189 (55.56%), Postives = 142/189 (75.13%), Query Frame = 1
BLAST of Spo04116.1 vs. ExPASy Swiss-Prot
Match: CYTI_VIGUN (Cysteine proteinase inhibitor OS=Vigna unguiculata PE=1 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 5.600e-30 Identity = 63/97 (64.95%), Postives = 79/97 (81.44%), Query Frame = 1
BLAST of Spo04116.1 vs. ExPASy Swiss-Prot
Match: CYT3_ARATH (Cysteine proteinase inhibitor 3 OS=Arabidopsis thaliana GN=CYS3 PE=2 SV=2) HSP 1 Score: 121.7 bits (304), Expect = 1.300e-26 Identity = 55/89 (61.80%), Postives = 73/89 (82.02%), Query Frame = 1
BLAST of Spo04116.1 vs. TAIR (Arabidopsis)
Match: AT3G12490.2 (cystatin B) HSP 1 Score: 266.2 bits (679), Expect = 2.400e-71 Identity = 141/238 (59.24%), Postives = 173/238 (72.69%), Query Frame = 1
BLAST of Spo04116.1 vs. TAIR (Arabidopsis)
Match: AT5G05110.1 (Cystatin/monellin family protein) HSP 1 Score: 203.8 bits (517), Expect = 1.400e-52 Identity = 105/189 (55.56%), Postives = 142/189 (75.13%), Query Frame = 1
BLAST of Spo04116.1 vs. TAIR (Arabidopsis)
Match: AT2G40880.1 (cystatin A) HSP 1 Score: 121.7 bits (304), Expect = 7.200e-28 Identity = 55/89 (61.80%), Postives = 73/89 (82.02%), Query Frame = 1
BLAST of Spo04116.1 vs. TAIR (Arabidopsis)
Match: AT5G12140.1 (cystatin-1) HSP 1 Score: 105.9 bits (263), Expect = 4.100e-23 Identity = 49/91 (53.85%), Postives = 64/91 (70.33%), Query Frame = 1
BLAST of Spo04116.1 vs. TAIR (Arabidopsis)
Match: AT4G16500.1 (Cystatin/monellin superfamily protein) HSP 1 Score: 59.7 bits (143), Expect = 3.400e-9 Identity = 34/89 (38.20%), Postives = 53/89 (59.55%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo04116.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo04116.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo04116.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo04116.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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