Spo04201 (gene) | SpinachBase

Overview


Name	Spo04201
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Basic helix-loop-helix family protein
Location	SpoScf_00872 : 172319 .. 175380 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTTCTATAACAGTTCACCAATTATAAGTATTCCATCAATCAATTATTTATTACGTCATTTTGGTTTTATATTTAAACCAATCACATTATATATTCGTCGTCTCACTCAACCATAAATCAATTTTCTAAATCATTACAAATTTTGAACCAAAAATACACAGTATATTTCCCAACCATCACATTATTTTGTATGGATGGATTTTACAAATTGTTCGATATCATAAATAACAGAGTGACCCTGAATGACGCAATAAAAGTGTTTTCAACAGCGTAGATGACTATAAATATATAGTGTTTGAAAAAAGTTTTTATAAGTCCAAATATATTTTATGTTATACTATATCTTAAGAAATGGCCAAAAATAGCTTTCAGTATTCAAGTTTACCAGAAGAGGAAACCATGCCTCACCATTTTAATGCTACGAATACAACATCAAGTAGCATGCATTTGCAAGAATTGCCTGCAAATTGTTATGCCTTAGAATTTCAGGAACCTTTTGAAGGTTTTGCAGAATTTGAAGATAAAGCTTCTGCTGCTGATTCTTCTCATAATCACAGGCAAGCCGAGAAGCGGCGCCGCGATCGGATTAACGGGCAGCTTGCTAGGCTTAGGAGGCTCATTCCCAAGTCAGAAAAGGTAATCCAATTAGTTAATTAAGCTTCCTTAATTACTTTTGATATTGTTAGTAAAATACAGTACTGTCTAATTTATTTTACTTAACACATTGTCAGGCAATGATCTACAAAAATTAACTTAAGATTAAATTCTTGCTGATAAAACAATGAATGTTAATTACTACTCTTTTTCTATTTAAGTGTCCACTTTTCAAAAATAGTGTCCACTTTCCATTTTTGGACTACATTTTTTCATACAATTTTCTCACTTTTCCATACACTTTTCCCACTTTTCCATAAATCATGATTGTTTTTTCTTACACATTCTACACTTTTTCCACTCTTCCATCCCCACATACACTTTTATTTGTACTTTATCAATAAACAATTATCTATTTTATCCTTTCCCCAAACAAATAATCACAATTATTGTTTTTCTTAAACACTTTTTATTTTCTTTAATTACCATGAATTTCTCCAAAGTGGACACTTAAATAGAAACAGATGGAGTTTTGTCAATAAAAATAGTTGAATTAAGCAAAGTCATATGTGGTTCGAATTCGCCCATGTAGACTCGGATGCTATTTTTTTTTTTTTATTTTATCATCTTTCGTAGAATTCATCCTAGAACCAAGAACATTTTGTACGTACGACATTGAAAAATATTGTTAGGTCCTCATGAAATACGGATTAACTATTCAATTTGCCTAATTTTTCGTTATGTTTTATTATCAATTCGGCACCTCTTACAAGTCAATCGTTACTGTAAACAATACGATCTGGTTACAGAAGACGACATATTCACTTATTGTAGTACTCGGCATACTCTATAATTCTATATAGCCACTTATGAAGTAATCATGTTTATAAAAGATTAGTGGTTTCTTAATTTCGTGTTCCCAATGATTTTTCTTAGTTTAGACGATCATGGTGTTCATGATGCGTTTCATCATAAGCTTTAGGAGATATGTCAATGTAAGTCAAAGTAGGTCCTTGAAACTTATTAACATGTCTAGATGAATTGTTTTAGATCAATATCATTGCTTACATTATGTTCCATTTTTAAGATTCTCCATAAATCTTCAATATGATGGATTTTGAAACTTTTGGTCTACCACATAGCTAGATAGATAGAGTTGTCAAAAAACGCATGTAGAATCAGTTGCAGATCTTAAACAGTTTTACGAGGGAAAAATGTAAGCAATATAGTATTGAATTTATGCAATTGTACTTAAATTTTAGGGTGTGCCTGCAAAAATGTGTTTTAAAATTGTAAAAATGTGATGTATGATAGTTAAATATATAAAACGACTCGGCTCTACATGCAACGGGGTGTAACTTCTACTCCATATGTCCCTAAAAGATTGTCCCGTTGCAATTCTTTGGGTCAAACTTTGAAACTTTGATCATGAATTATCATTAGCCTATAAAAAAAATATAGTCATGTGGGGTCTTATTAGTAATATCAACTTTATAATTAATGTTTACACTTGTGGAATTAGAGATATTTAAGTTTGTGGAATTTTAAATTGTGTATTTGACACCGTGAAAAGTCAAATGGACGGTCTTTTAGGGACGGTAGGAGTACCAATTAATTGTCCTAATAGAACCTCATGATAGTCCTTTAACTTGTAAAGCAGATGGACAAGGCAGCACTCCTAGAAAGAGTAGTTGAGCAAGTTAAGGATCTAAAGAGAAAAGCATCAGAAATCAGCAAAATCTTTACAATCCCATCAGAAATCGATGACATAACTATTGAATGTCATCGGAAAGAAAATCATCCCAACAACAACAACAACAACAACAACAACAACAACAACAGCAACAACAACAACAACAGCAACATAATGTTTATGAAGGCTACATTATGCTGCGAAGATCGGCCTGACTTAATTCCAGAGCTAATACGGGCACTCAAAGACCTTAACTTGACAGTAATTGGAGCTGATATTGGCTGTTTAGGAGGAAGGATGAAAAGTATTCTATTACTTTACTACAAATTAGATAGTAATAATGATGGTGTTGTTTGTAATCTTAGTGCAATTAAGCAGTCTCTAATGGGTNATTGAATGTCATCGGAAAGAAAATCATCCCAACAACAACAACAACAACAACAACAACAACAACAGCAACAGCAACATAATGTTTATGAAGGCTACATTATGCTGCGAAGATCGGCCTGACTTAATTCCAGAGCTAATACGGGAACTCAAAGACCTTAACTTGACAGTAATTGGAGCTGATATTGGCTGTTTAGGAGGAAGGATGAAAAGTATTCTATTACTTTACTACAAATTAGATAGTAATAATGATGGTGTTGTTTGTAATGTTAGTGCAATTAAGCAGTCTCTAATGGGTGTTTTAACTAGAATTATCTCATGGTCTAGTGCTAGTACTTCCAGTTTTCGTGTTACTAGTAAGAGGCAACGCTTCTTTTTCTCTTCTTAA

mRNA sequence

AGTTCTATAACAGTTCACCAATTATAAGTATTCCATCAATCAATTATTTATTACGTCATTTTGGTTTTATATTTAAACCAATCACATTATATATTCGTCGTCTCACTCAACCATAAATCAATTTTCTAAATCATTACAAATTTTGAACCAAAAATACACAGTATATTTCCCAACCATCACATTATTTTGTATGGATGGATTTTACAAATTGTTCGATATCATAAATAACAGAGTGACCCTGAATGACGCAATAAAAGTGTTTTCAACAGCGTAGATGACTATAAATATATAGTGTTTGAAAAAAGTTTTTATAAGTCCAAATATATTTTATGTTATACTATATCTTAAGAAATGGCCAAAAATAGCTTTCAGTATTCAAGTTTACCAGAAGAGGAAACCATGCCTCACCATTTTAATGCTACGAATACAACATCAAGTAGCATGCATTTGCAAGAATTGCCTGCAAATTGTTATGCCTTAGAATTTCAGGAACCTTTTGAAGGTTTTGCAGAATTTGAAGATAAAGCTTCTGCTGCTGATTCTTCTCATAATCACAGGCAAGCCGAGAAGCGGCGCCGCGATCGGATTAACGGGCAGCTTGCTAGGCTTAGGAGGCTCATTCCCAAGTCAGAAAAGATGGACAAGGCAGCACTCCTAGAAAGAGTAGTTGAGCAAGTTAAGGATCTAAAGAGAAAAGCATCAGAAATCAGCAAAATCTTTACAATCCCATCAGAAATCGATGACATAACTATTGAATGTCATCGGAAAGAAAATCATCCCAACAACAACAACAACAACAACAACAACAACAACAACAGCAACAACAACAACAACAGCAACATAATGTTTATGAAGGCTACATTATGCTGCGAAGATCGGCCTGACTTAATTCCAGAGCTAATACGGGCACTCAAAGACCTTAACTTGACAGTAATTGGAGCTGATATTGGCTGTTTAGGAGGAAGGATGAAAAAAAATCATCCCAACAACAACAACAACAACAACAACAACAACAACAGCAACAGCAACATAATGTTTATGAAGGCTACATTATGCTGCGAAGATCGGCCTGACTTAATTCCAGAGCTAATACGGGAACTCAAAGACCTTAACTTGACAGTAATTGGAGCTGATATTGGCTGTTTAGGAGGAAGGATGAAAAGTATTCTATTACTTTACTACAAATTAGATAGTAATAATGATGGTGTTGTTTGTAATGTTAGTGCAATTAAGCAGTCTCTAATGGGTGTTTTAACTAGAATTATCTCATGGTCTAGTGCTAGTACTTCCAGTTTTCGTGTTACTAGTAAGAGGCAACGCTTCTTTTTCTCTTCTTAA

Coding sequence (CDS)

ATGGCCAAAAATAGCTTTCAGTATTCAAGTTTACCAGAAGAGGAAACCATGCCTCACCATTTTAATGCTACGAATACAACATCAAGTAGCATGCATTTGCAAGAATTGCCTGCAAATTGTTATGCCTTAGAATTTCAGGAACCTTTTGAAGGTTTTGCAGAATTTGAAGATAAAGCTTCTGCTGCTGATTCTTCTCATAATCACAGGCAAGCCGAGAAGCGGCGCCGCGATCGGATTAACGGGCAGCTTGCTAGGCTTAGGAGGCTCATTCCCAAGTCAGAAAAGATGGACAAGGCAGCACTCCTAGAAAGAGTAGTTGAGCAAGTTAAGGATCTAAAGAGAAAAGCATCAGAAATCAGCAAAATCTTTACAATCCCATCAGAAATCGATGACATAACTATTGAATGTCATCGGAAAGAAAATCATCCCAACAACAACAACAACAACAACAACAACAACAACAACAGCAACAACAACAACAACAGCAACATAATGTTTATGAAGGCTACATTATGCTGCGAAGATCGGCCTGACTTAATTCCAGAGCTAATACGGGCACTCAAAGACCTTAACTTGACAGTAATTGGAGCTGATATTGGCTGTTTAGGAGGAAGGATGAAAAAAAATCATCCCAACAACAACAACAACAACAACAACAACAACAACAGCAACAGCAACATAATGTTTATGAAGGCTACATTATGCTGCGAAGATCGGCCTGACTTAATTCCAGAGCTAATACGGGAACTCAAAGACCTTAACTTGACAGTAATTGGAGCTGATATTGGCTGTTTAGGAGGAAGGATGAAAAGTATTCTATTACTTTACTACAAATTAGATAGTAATAATGATGGTGTTGTTTGTAATGTTAGTGCAATTAAGCAGTCTCTAATGGGTGTTTTAACTAGAATTATCTCATGGTCTAGTGCTAGTACTTCCAGTTTTCGTGTTACTAGTAAGAGGCAACGCTTCTTTTTCTCTTCTTAA

Protein sequence

MAKNSFQYSSLPEEETMPHHFNATNTTSSSMHLQELPANCYALEFQEPFEGFAEFEDKASAADSSHNHRQAEKRRRDRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRKASEISKIFTIPSEIDDITIECHRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCCEDRPDLIPELIRALKDLNLTVIGADIGCLGGRMKKNHPNNNNNNNNNNNSNSNIMFMKATLCCEDRPDLIPELIRELKDLNLTVIGADIGCLGGRMKSILLLYYKLDSNNDGVVCNVSAIKQSLMGVLTRIISWSSASTSSFRVTSKRQRFFFSS

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo04201.1	Spo04201.1	mRNA

Homology

[Close]

BLAST of Spo04201.1 vs. NCBI nr
Match: gi|902234040|gb|KNA23304.1| (hypothetical protein SOVF_026020 isoform A [Spinacia oleracea])

HSP 1 Score: 335.9 bits (860), Expect = 8.000e-89
Identity = 189/218 (86.70%), Postives = 196/218 (89.91%), Query Frame = 1

		  
Query: 17  MPHHFNATNTTSSSMHLQELPANCYALEFQEPFEGFAEFEDKASAADSSHNHRQAEKRRR 76
           MPHHFNATNTTSSSMHLQELPANCYALEFQEPFEGFAEFEDKASAADSSHNHRQAEKRRR
Sbjct: 1   MPHHFNATNTTSSSMHLQELPANCYALEFQEPFEGFAEFEDKASAADSSHNHRQAEKRRR 60

Query: 77  DRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRKASEISKIFTIPSEIDDITIEC 136
           DRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRKASEISKIFTIPSEIDDITIEC
Sbjct: 61  DRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRKASEISKIFTIPSEIDDITIEC 120

Query: 137 HRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCCEDRPDLIPELIRALKDLNLTVIG 196
           HRKENHPNNNNNNNN     NNN+NSNIMFMKATLCCEDRPDLIPELIR LKDLNLTVIG
Sbjct: 121 HRKENHPNNNNNNNN-----NNNSNSNIMFMKATLCCEDRPDLIPELIRELKDLNLTVIG 180

Query: 197 ADIGCLGGRMKKNHPNNNNNNNNNNNSNSNIMFMKATL 235
           ADIGCLGGRMK         ++NN+    N+  +K +L
Sbjct: 181 ADIGCLGGRMKSILLLYYKLDSNNDGVVCNVSAIKQSL 213

[Close]

BLAST of Spo04201.1 vs. NCBI nr
Match: gi|731314989|ref|XP_010689462.1| (PREDICTED: transcription factor bHLH51 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 331.3 bits (848), Expect = 2.000e-87
Identity = 205/332 (61.75%), Postives = 243/332 (73.19%), Query Frame = 1

		  
Query: 1   MAKNSFQYSSLPEEETMPHHFNATNTTSSSMHLQELPANCYALEFQEPFEGFAEFEDKAS 60
           MAKNSF Y  LPEEET+ HHF+AT   +S M LQELP N YA ++QE F+G+AEFEDKA+
Sbjct: 1   MAKNSFCYPGLPEEETITHHFHAT---ASRMELQELPTNNYAFQYQEDFDGYAEFEDKAA 60

Query: 61  AADSSHNHRQAEKRRRDRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRKASEIS 120
           AA SSH+HRQAEKRRRDRINGQL RLRRLIPKS+KMDKAALLE+VVEQVKDLKRKASEI+
Sbjct: 61  AAASSHSHRQAEKRRRDRINGQLTRLRRLIPKSDKMDKAALLEKVVEQVKDLKRKASEIN 120

Query: 121 KIFTIPSEIDDITIECHRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCCEDRPDLI 180
           K FTIP+E DDITI+CH +     ++  +   +++   N+ S ++     +  +   D  
Sbjct: 121 KFFTIPTESDDITIDCHTETMQEKDSFPSTIIDHDHKENHPSRLVRTSLPVSGDPGVDSH 180

Query: 181 PELIRALKDLNLTVIGADIGCLGGRM-KKNHPNNNNNNNNNNNSNSNIMFMKATLCCEDR 240
           P                  G    +  K+NHPNNNNNNN        I+ +KAT CCEDR
Sbjct: 181 P---------------LPCGSFAPKENKENHPNNNNNNN--------IVLIKATFCCEDR 240

Query: 241 PDLIPELIRELKDLNLTVIGADIGCLGGRMKSILLLYYKLDSN---NDGVVCNVSAIKQS 300
            DLIPELIR LKDL LT+IGA+IGCLGGRMKSILLLYY+LD N   N G VC+VSAIKQS
Sbjct: 241 IDLIPELIRALKDLKLTIIGAEIGCLGGRMKSILLLYYRLDVNDVANHG-VCSVSAIKQS 300

Query: 301 LMGVLTRIISWSSASTSSFRVTSKRQRFFFSS 329
           +M VLTR++SWSSASTS+FRVTSKRQRFFFSS
Sbjct: 301 IMSVLTRVLSWSSASTSNFRVTSKRQRFFFSS 305

[Close]

BLAST of Spo04201.1 vs. NCBI nr
Match: gi|902234041|gb|KNA23305.1| (hypothetical protein SOVF_026020 isoform B [Spinacia oleracea])

HSP 1 Score: 331.3 bits (848), Expect = 2.000e-87
Identity = 189/219 (86.30%), Postives = 196/219 (89.50%), Query Frame = 1

		  
Query: 17  MPHHFNATNTTSSSMHLQELPANCYALEFQEPFEGFAEFEDKASAADSSHNHRQAEKRRR 76
           MPHHFNATNTTSSSMHLQELPANCYALEFQEPFEGFAEFEDKASAADSSHNHRQAEKRRR
Sbjct: 1   MPHHFNATNTTSSSMHLQELPANCYALEFQEPFEGFAEFEDKASAADSSHNHRQAEKRRR 60

Query: 77  DRINGQLARLRRLIPKSEK-MDKAALLERVVEQVKDLKRKASEISKIFTIPSEIDDITIE 136
           DRINGQLARLRRLIPKSEK MDKAALLERVVEQVKDLKRKASEISKIFTIPSEIDDITIE
Sbjct: 61  DRINGQLARLRRLIPKSEKQMDKAALLERVVEQVKDLKRKASEISKIFTIPSEIDDITIE 120

Query: 137 CHRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCCEDRPDLIPELIRALKDLNLTVI 196
           CHRKENHPNNNNNNNN     NNN+NSNIMFMKATLCCEDRPDLIPELIR LKDLNLTVI
Sbjct: 121 CHRKENHPNNNNNNNN-----NNNSNSNIMFMKATLCCEDRPDLIPELIRELKDLNLTVI 180

Query: 197 GADIGCLGGRMKKNHPNNNNNNNNNNNSNSNIMFMKATL 235
           GADIGCLGGRMK         ++NN+    N+  +K +L
Sbjct: 181 GADIGCLGGRMKSILLLYYKLDSNNDGVVCNVSAIKQSL 214

[Close]

BLAST of Spo04201.1 vs. NCBI nr
Match: gi|734400216|gb|KHN31290.1| (Transcription factor bHLH51 [Glycine soja])

HSP 1 Score: 136.0 bits (341), Expect = 1.200e-28
Identity = 89/193 (46.11%), Postives = 125/193 (64.77%), Query Frame = 1

		  
Query: 15  ETMPHHFNATNTTSSSMHLQELPANCYALEFQEPFEGFAEFEDKASAADSSHNHRQAEKR 74
           + +PHH     T S+S+   E  +      +  P EG AE  ++A +A  SH+  QAEKR
Sbjct: 52  QILPHHV----TDSASLQFGEFHS------WPLPIEGAAE--ERAISASKSHS--QAEKR 111

Query: 75  RRDRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRKASEISKIFTIPSEIDDITI 134
           RRDRIN QLA LR+LIPKS+KMDKAALL  V++QVKDLKRKA ++S+ FT+P+EID+++I
Sbjct: 112 RRDRINAQLATLRKLIPKSDKMDKAALLGSVIDQVKDLKRKAMDVSRAFTVPTEIDEVSI 171

Query: 135 ECHRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCCEDRPDLIPELIRALKDLNLTV 194
           +    ++      N   +N           + +KA++CC+DRP+L PELI+ LK L LT 
Sbjct: 172 DYDHVQDESCTKVNKQKDN-----------IVIKASVCCDDRPELFPELIQVLKGLRLTA 219

Query: 195 IGADIGCLGGRMK 208
           + ADI  +GGR+K
Sbjct: 232 VKADIASVGGRIK 219

[Close]

BLAST of Spo04201.1 vs. NCBI nr
Match: gi|593801048|ref|XP_007163561.1| (hypothetical protein PHAVU_001G244500g [Phaseolus vulgaris])

HSP 1 Score: 135.2 bits (339), Expect = 2.100e-28
Identity = 89/191 (46.60%), Postives = 126/191 (65.97%), Query Frame = 1

		  
Query: 25  NTTSSSMHLQELP--ANCYALEFQE------PFEGFAEFEDKASAADSSHNHRQAEKRRR 84
           +++S ++  Q LP   +  +L+F E      P EG AE  ++A +A  SH+  QAEKRRR
Sbjct: 41  HSSSFAVPTQILPHVTDSASLQFGEFHSWPLPIEGAAE--ERAMSASKSHS--QAEKRRR 100

Query: 85  DRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRKASEISKIFTIPSEIDDITIEC 144
           DRIN QLA LR+LIPKS+KMDKAALL  V++ VKDLKRKA ++S+ FT+P+EID+++I+C
Sbjct: 101 DRINAQLATLRKLIPKSDKMDKAALLGSVIDHVKDLKRKAMDVSRAFTVPTEIDEVSIDC 160

Query: 145 HRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCCEDRPDLIPELIRALKDLNLTVIG 204
              ++      N    N           + +KA++CC+DRP+L PELI+ LK L LT + 
Sbjct: 161 DHVQDESCTKVNKLKEN-----------IVIKASVCCDDRPELFPELIQVLKGLRLTAVK 216

Query: 205 ADIGCLGGRMK 208
           ADI  +GGR+K
Sbjct: 221 ADIASVGGRIK 216

[Close]

BLAST of Spo04201.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RWK7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_026020 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 5.600e-89
Identity = 189/218 (86.70%), Postives = 196/218 (89.91%), Query Frame = 1

		  
Query: 17  MPHHFNATNTTSSSMHLQELPANCYALEFQEPFEGFAEFEDKASAADSSHNHRQAEKRRR 76
           MPHHFNATNTTSSSMHLQELPANCYALEFQEPFEGFAEFEDKASAADSSHNHRQAEKRRR
Sbjct: 1   MPHHFNATNTTSSSMHLQELPANCYALEFQEPFEGFAEFEDKASAADSSHNHRQAEKRRR 60

Query: 77  DRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRKASEISKIFTIPSEIDDITIEC 136
           DRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRKASEISKIFTIPSEIDDITIEC
Sbjct: 61  DRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRKASEISKIFTIPSEIDDITIEC 120

Query: 137 HRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCCEDRPDLIPELIRALKDLNLTVIG 196
           HRKENHPNNNNNNNN     NNN+NSNIMFMKATLCCEDRPDLIPELIR LKDLNLTVIG
Sbjct: 121 HRKENHPNNNNNNNN-----NNNSNSNIMFMKATLCCEDRPDLIPELIRELKDLNLTVIG 180

Query: 197 ADIGCLGGRMKKNHPNNNNNNNNNNNSNSNIMFMKATL 235
           ADIGCLGGRMK         ++NN+    N+  +K +L
Sbjct: 181 ADIGCLGGRMKSILLLYYKLDSNNDGVVCNVSAIKQSL 213

[Close]

BLAST of Spo04201.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RUU5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_026020 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 1.400e-87
Identity = 189/219 (86.30%), Postives = 196/219 (89.50%), Query Frame = 1

		  
Query: 17  MPHHFNATNTTSSSMHLQELPANCYALEFQEPFEGFAEFEDKASAADSSHNHRQAEKRRR 76
           MPHHFNATNTTSSSMHLQELPANCYALEFQEPFEGFAEFEDKASAADSSHNHRQAEKRRR
Sbjct: 1   MPHHFNATNTTSSSMHLQELPANCYALEFQEPFEGFAEFEDKASAADSSHNHRQAEKRRR 60

Query: 77  DRINGQLARLRRLIPKSEK-MDKAALLERVVEQVKDLKRKASEISKIFTIPSEIDDITIE 136
           DRINGQLARLRRLIPKSEK MDKAALLERVVEQVKDLKRKASEISKIFTIPSEIDDITIE
Sbjct: 61  DRINGQLARLRRLIPKSEKQMDKAALLERVVEQVKDLKRKASEISKIFTIPSEIDDITIE 120

Query: 137 CHRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCCEDRPDLIPELIRALKDLNLTVI 196
           CHRKENHPNNNNNNNN     NNN+NSNIMFMKATLCCEDRPDLIPELIR LKDLNLTVI
Sbjct: 121 CHRKENHPNNNNNNNN-----NNNSNSNIMFMKATLCCEDRPDLIPELIRELKDLNLTVI 180

Query: 197 GADIGCLGGRMKKNHPNNNNNNNNNNNSNSNIMFMKATL 235
           GADIGCLGGRMK         ++NN+    N+  +K +L
Sbjct: 181 GADIGCLGGRMKSILLLYYKLDSNNDGVVCNVSAIKQSL 214

[Close]

BLAST of Spo04201.1 vs. UniProtKB/TrEMBL
Match: A0A0B2RD29_GLYSO (Transcription factor bHLH51 OS=Glycine soja GN=glysoja_022944 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 8.500e-29
Identity = 89/193 (46.11%), Postives = 125/193 (64.77%), Query Frame = 1

		  
Query: 15  ETMPHHFNATNTTSSSMHLQELPANCYALEFQEPFEGFAEFEDKASAADSSHNHRQAEKR 74
           + +PHH     T S+S+   E  +      +  P EG AE  ++A +A  SH+  QAEKR
Sbjct: 52  QILPHHV----TDSASLQFGEFHS------WPLPIEGAAE--ERAISASKSHS--QAEKR 111

Query: 75  RRDRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRKASEISKIFTIPSEIDDITI 134
           RRDRIN QLA LR+LIPKS+KMDKAALL  V++QVKDLKRKA ++S+ FT+P+EID+++I
Sbjct: 112 RRDRINAQLATLRKLIPKSDKMDKAALLGSVIDQVKDLKRKAMDVSRAFTVPTEIDEVSI 171

Query: 135 ECHRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCCEDRPDLIPELIRALKDLNLTV 194
           +    ++      N   +N           + +KA++CC+DRP+L PELI+ LK L LT 
Sbjct: 172 DYDHVQDESCTKVNKQKDN-----------IVIKASVCCDDRPELFPELIQVLKGLRLTA 219

Query: 195 IGADIGCLGGRMK 208
           + ADI  +GGR+K
Sbjct: 232 VKADIASVGGRIK 219

[Close]

BLAST of Spo04201.1 vs. UniProtKB/TrEMBL
Match: V7D1Z3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G244500g PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.400e-28
Identity = 89/191 (46.60%), Postives = 126/191 (65.97%), Query Frame = 1

		  
Query: 25  NTTSSSMHLQELP--ANCYALEFQE------PFEGFAEFEDKASAADSSHNHRQAEKRRR 84
           +++S ++  Q LP   +  +L+F E      P EG AE  ++A +A  SH+  QAEKRRR
Sbjct: 41  HSSSFAVPTQILPHVTDSASLQFGEFHSWPLPIEGAAE--ERAMSASKSHS--QAEKRRR 100

Query: 85  DRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRKASEISKIFTIPSEIDDITIEC 144
           DRIN QLA LR+LIPKS+KMDKAALL  V++ VKDLKRKA ++S+ FT+P+EID+++I+C
Sbjct: 101 DRINAQLATLRKLIPKSDKMDKAALLGSVIDHVKDLKRKAMDVSRAFTVPTEIDEVSIDC 160

Query: 145 HRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCCEDRPDLIPELIRALKDLNLTVIG 204
              ++      N    N           + +KA++CC+DRP+L PELI+ LK L LT + 
Sbjct: 161 DHVQDESCTKVNKLKEN-----------IVIKASVCCDDRPELFPELIQVLKGLRLTAVK 216

Query: 205 ADIGCLGGRMK 208
           ADI  +GGR+K
Sbjct: 221 ADIASVGGRIK 216

[Close]

BLAST of Spo04201.1 vs. UniProtKB/TrEMBL
Match: I1MZ11_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G025800 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.900e-28
Identity = 89/193 (46.11%), Postives = 125/193 (64.77%), Query Frame = 1

		  
Query: 15  ETMPHHFNATNTTSSSMHLQELPANCYALEFQEPFEGFAEFEDKASAADSSHNHRQAEKR 74
           + +PHH     T S+S+   E  +      +  P EG AE  ++A +A  SH+  QAEKR
Sbjct: 52  QILPHHV----TDSASLQFGEFHS------WPLPIEGAAE--ERAISASKSHS--QAEKR 111

Query: 75  RRDRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRKASEISKIFTIPSEIDDITI 134
           RRDRIN QLA LR+LIPKS+KMDKAALL  V++QVKDLKRKA ++S+ FT+P+EID+++I
Sbjct: 112 RRDRINAQLATLRKLIPKSDKMDKAALLGSVIDQVKDLKRKAMDVSRAFTVPTEIDEVSI 171

Query: 135 ECHRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCCEDRPDLIPELIRALKDLNLTV 194
           +    ++      N   +N           + +KA++CC+DRP+L PELI+ LK L LT 
Sbjct: 172 DYDHVQDESCTKVNKLKDN-----------IVIKASVCCDDRPELFPELIQVLKGLRLTA 219

Query: 195 IGADIGCLGGRMK 208
           + ADI  +GGR+K
Sbjct: 232 VKADIASVGGRIK 219

[Close]

BLAST of Spo04201.1 vs. ExPASy Swiss-Prot
Match: BH051_ARATH (Transcription factor bHLH51 OS=Arabidopsis thaliana GN=BHLH51 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.500e-21
Identity = 72/175 (41.14%), Postives = 104/175 (59.43%), Query Frame = 1

		  
Query: 61  AADSSHNHRQAEKRRRDRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRKASEIS 120
           A   S +HR AEKRRRDRIN  L  LR+L+P S+K+DKAALL  V+EQVK+LK+KA+E  
Sbjct: 60  AESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKAAESP 119

Query: 121 KIFTIPSEIDDITIECHRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCCEDRPDLI 180
               +P+E D++T++                    S+  +N+N +  KA+ CCED+P+ I
Sbjct: 120 IFQDLPTEADEVTVQ----------------PETISDFESNTNTIIFKASFCCEDQPEAI 179

Query: 181 PELIRALKDLNLTVIGADIGCLGGRMKKNHPNNNNNNNNNNNSNSNIMFMKATLC 236
            E+IR L  L L  I A+I  +GGRM+ N    ++N N   N  ++   +K +LC
Sbjct: 180 SEIIRVLTKLQLETIQAEIISVGGRMRINFILKDSNCNETTNIAASAKALKQSLC 218

[Close]

BLAST of Spo04201.1 vs. ExPASy Swiss-Prot
Match: BH030_ARATH (Transcription factor bHLH30 OS=Arabidopsis thaliana GN=BHLH30 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.100e-20
Identity = 58/149 (38.93%), Postives = 90/149 (60.40%), Query Frame = 1

		  
Query: 59  ASAADSSHNHRQAEKRRRDRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRKASE 118
           A A  +S +H +AE+RRR+RIN  LA+LR ++P + K DKA+LL  V++ VK+LKR+ S 
Sbjct: 169 AKALAASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELKRETSV 228

Query: 119 ISKIFTIPSEIDDITIECHRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCCEDRPD 178
           IS+   +P+E D++T+    +E                          +KA+LCCEDR D
Sbjct: 229 ISETNLVPTESDELTVAFTEEE------------------ETGDGRFVIKASLCCEDRSD 288

Query: 179 LIPELIRALKDLNLTVIGADIGCLGGRMK 208
           L+P++I+ LK + L  + A+I  +GGR+K
Sbjct: 289 LLPDMIKTLKAMRLKTLKAEITTVGGRVK 299

[Close]

BLAST of Spo04201.1 vs. ExPASy Swiss-Prot
Match: BH032_ARATH (Transcription factor AIG1 OS=Arabidopsis thaliana GN=BHLH32 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 4.600e-20
Identity = 56/149 (37.58%), Postives = 93/149 (62.42%), Query Frame = 1

		  
Query: 59  ASAADSSHNHRQAEKRRRDRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRKASE 118
           A A  +S +H +AE+RRR+RIN  LA+LR ++P + K DKA+LL  V++ +K+LKR+ S+
Sbjct: 127 AKALAASKSHSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKELKRQTSQ 186

Query: 119 ISKIFTIPSEIDDITIECHRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCCEDRPD 178
           I+  + +P+E DD+T++                    S+ N+    + ++A+ CC+DR D
Sbjct: 187 ITDTYQVPTECDDLTVD--------------------SSYNDEEGNLVIRASFCCQDRTD 246

Query: 179 LIPELIRALKDLNLTVIGADIGCLGGRMK 208
           L+ ++I ALK L L  + A+I  +GGR+K
Sbjct: 247 LMHDVINALKSLRLRTLKAEIATVGGRVK 255

[Close]

BLAST of Spo04201.1 vs. ExPASy Swiss-Prot
Match: BH106_ARATH (Transcription factor bHLH106 OS=Arabidopsis thaliana GN=BHLH106 PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 5.900e-15
Identity = 58/154 (37.66%), Postives = 95/154 (61.69%), Query Frame = 1

		  
Query: 56  EDKASAADSSHNHRQAEKRRRDRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRK 115
           +D+A AA    NH++AE+RRR+RIN  L +LR ++  + K DKA LL +VV++V++LK++
Sbjct: 61  QDRALAA--LRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKVVQRVRELKQQ 120

Query: 116 ASEISKI--FTIPSEIDDITIECHRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCC 175
             E S      +PSE D+I++                   +  + +N+ +I+F KA+LCC
Sbjct: 121 TLETSDSDQTLLPSETDEISVL------------------HFGDYSNDGHIIF-KASLCC 180

Query: 176 EDRPDLIPELIRALKDLNLTVIGADIGCLGGRMK 208
           EDR DL+P+L+  LK LN+  + A++  +GGR +
Sbjct: 181 EDRSDLLPDLMEILKSLNMKTLRAEMVTIGGRTR 193

[Close]

BLAST of Spo04201.1 vs. ExPASy Swiss-Prot
Match: BH107_ARATH (Putative transcription factor bHLH107 OS=Arabidopsis thaliana GN=BHLH107 PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 5.900e-15
Identity = 59/153 (38.56%), Postives = 94/153 (61.44%), Query Frame = 1

		  
Query: 55  FEDKASAADSSHNHRQAEKRRRDRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKR 114
           +EDKA A  S  NH++AE++RR RIN  L +LR+L+  + K DK+ LL +VV++VK+LK+
Sbjct: 38  YEDKALA--SLRNHKEAERKRRARINSHLNKLRKLLSCNSKTDKSTLLAKVVQRVKELKQ 97

Query: 115 KASEISKIFTIPSEIDDITIECHRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCCE 174
           +  EI+   TIPSE D+I++                 N  + +  ++  I+F K + CCE
Sbjct: 98  QTLEITDE-TIPSETDEISVL----------------NIEDCSRGDDRRIIF-KVSFCCE 157

Query: 175 DRPDLIPELIRALKDLNLTVIGADIGCLGGRMK 208
           DRP+L+ +L+  LK L +  + AD+  +GGR +
Sbjct: 158 DRPELLKDLMETLKSLQMETLFADMTTVGGRTR 170

[Close]

BLAST of Spo04201.1 vs. TAIR (Arabidopsis)
Match: AT2G40200.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 104.4 bits (259), Expect = 1.400e-22
Identity = 72/175 (41.14%), Postives = 104/175 (59.43%), Query Frame = 1

		  
Query: 61  AADSSHNHRQAEKRRRDRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRKASEIS 120
           A   S +HR AEKRRRDRIN  L  LR+L+P S+K+DKAALL  V+EQVK+LK+KA+E  
Sbjct: 60  AESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKAAESP 119

Query: 121 KIFTIPSEIDDITIECHRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCCEDRPDLI 180
               +P+E D++T++                    S+  +N+N +  KA+ CCED+P+ I
Sbjct: 120 IFQDLPTEADEVTVQ----------------PETISDFESNTNTIIFKASFCCEDQPEAI 179

Query: 181 PELIRALKDLNLTVIGADIGCLGGRMKKNHPNNNNNNNNNNNSNSNIMFMKATLC 236
            E+IR L  L L  I A+I  +GGRM+ N    ++N N   N  ++   +K +LC
Sbjct: 180 SEIIRVLTKLQLETIQAEIISVGGRMRINFILKDSNCNETTNIAASAKALKQSLC 218

[Close]

BLAST of Spo04201.1 vs. TAIR (Arabidopsis)
Match: AT1G68810.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 101.3 bits (251), Expect = 1.200e-21
Identity = 58/149 (38.93%), Postives = 90/149 (60.40%), Query Frame = 1

		  
Query: 59  ASAADSSHNHRQAEKRRRDRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRKASE 118
           A A  +S +H +AE+RRR+RIN  LA+LR ++P + K DKA+LL  V++ VK+LKR+ S 
Sbjct: 169 AKALAASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELKRETSV 228

Query: 119 ISKIFTIPSEIDDITIECHRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCCEDRPD 178
           IS+   +P+E D++T+    +E                          +KA+LCCEDR D
Sbjct: 229 ISETNLVPTESDELTVAFTEEE------------------ETGDGRFVIKASLCCEDRSD 288

Query: 179 LIPELIRALKDLNLTVIGADIGCLGGRMK 208
           L+P++I+ LK + L  + A+I  +GGR+K
Sbjct: 289 LLPDMIKTLKAMRLKTLKAEITTVGGRVK 299

[Close]

BLAST of Spo04201.1 vs. TAIR (Arabidopsis)
Match: AT3G25710.1 (basic helix-loop-helix 32)

HSP 1 Score: 100.1 bits (248), Expect = 2.600e-21
Identity = 56/149 (37.58%), Postives = 93/149 (62.42%), Query Frame = 1

		  
Query: 59  ASAADSSHNHRQAEKRRRDRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRKASE 118
           A A  +S +H +AE+RRR+RIN  LA+LR ++P + K DKA+LL  V++ +K+LKR+ S+
Sbjct: 127 AKALAASKSHSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKELKRQTSQ 186

Query: 119 ISKIFTIPSEIDDITIECHRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCCEDRPD 178
           I+  + +P+E DD+T++                    S+ N+    + ++A+ CC+DR D
Sbjct: 187 ITDTYQVPTECDDLTVD--------------------SSYNDEEGNLVIRASFCCQDRTD 246

Query: 179 LIPELIRALKDLNLTVIGADIGCLGGRMK 208
           L+ ++I ALK L L  + A+I  +GGR+K
Sbjct: 247 LMHDVINALKSLRLRTLKAEIATVGGRVK 255

[Close]

BLAST of Spo04201.1 vs. TAIR (Arabidopsis)
Match: AT2G41130.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 83.2 bits (204), Expect = 3.300e-16
Identity = 58/154 (37.66%), Postives = 95/154 (61.69%), Query Frame = 1

		  
Query: 56  EDKASAADSSHNHRQAEKRRRDRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKRK 115
           +D+A AA    NH++AE+RRR+RIN  L +LR ++  + K DKA LL +VV++V++LK++
Sbjct: 61  QDRALAA--LRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKVVQRVRELKQQ 120

Query: 116 ASEISKI--FTIPSEIDDITIECHRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCC 175
             E S      +PSE D+I++                   +  + +N+ +I+F KA+LCC
Sbjct: 121 TLETSDSDQTLLPSETDEISVL------------------HFGDYSNDGHIIF-KASLCC 180

Query: 176 EDRPDLIPELIRALKDLNLTVIGADIGCLGGRMK 208
           EDR DL+P+L+  LK LN+  + A++  +GGR +
Sbjct: 181 EDRSDLLPDLMEILKSLNMKTLRAEMVTIGGRTR 193

[Close]

BLAST of Spo04201.1 vs. TAIR (Arabidopsis)
Match: AT3G56770.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 83.2 bits (204), Expect = 3.300e-16
Identity = 59/153 (38.56%), Postives = 94/153 (61.44%), Query Frame = 1

		  
Query: 55  FEDKASAADSSHNHRQAEKRRRDRINGQLARLRRLIPKSEKMDKAALLERVVEQVKDLKR 114
           +EDKA A  S  NH++AE++RR RIN  L +LR+L+  + K DK+ LL +VV++VK+LK+
Sbjct: 38  YEDKALA--SLRNHKEAERKRRARINSHLNKLRKLLSCNSKTDKSTLLAKVVQRVKELKQ 97

Query: 115 KASEISKIFTIPSEIDDITIECHRKENHPNNNNNNNNNNNNSNNNNNSNIMFMKATLCCE 174
           +  EI+   TIPSE D+I++                 N  + +  ++  I+F K + CCE
Sbjct: 98  QTLEITDE-TIPSETDEISVL----------------NIEDCSRGDDRRIIF-KVSFCCE 157

Query: 175 DRPDLIPELIRALKDLNLTVIGADIGCLGGRMK 208
           DRP+L+ +L+  LK L +  + AD+  +GGR +
Sbjct: 158 DRPELLKDLMETLKSLQMETLFADMTTVGGRTR 170

The following BLAST results are available for this feature:

BLAST of Spo04201.1 vs. NCBI nr
BLAST of Spo04201.1 vs. UniProtKB/TrEMBL
BLAST of Spo04201.1 vs. ExPASy Swiss-Prot
BLAST of Spo04201.1 vs. TAIR (Arabidopsis)

BLAST of Spo04201.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|902234040\|gb\|KNA23304.1\|	8.0e-89	86.7	hypothetical protein SOVF_0260...	[more]
gi\|731314989\|ref\|XP_010689462.1\|	2.0e-87	61.7	PREDICTED: transcription facto...	[more]
gi\|902234041\|gb\|KNA23305.1\|	2.0e-87	86.3	hypothetical protein SOVF_0260...	[more]
gi\|734400216\|gb\|KHN31290.1\|	1.2e-28	46.1	Transcription factor bHLH51 [G...	[more]
gi\|593801048\|ref\|XP_007163561.1\|	2.1e-28	46.6	hypothetical protein PHAVU_001...	[more]

BLAST of Spo04201.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0K9RWK7_SPIOL	5.6e-89	86.7	Uncharacterized protein OS=Spi...	[more]
A0A0K9RUU5_SPIOL	1.4e-87	86.3	Uncharacterized protein OS=Spi...	[more]
A0A0B2RD29_GLYSO	8.5e-29	46.1	Transcription factor bHLH51 OS...	[more]
V7D1Z3_PHAVU	1.4e-28	46.6	Uncharacterized protein OS=Pha...	[more]
I1MZ11_SOYBN	1.9e-28	46.1	Uncharacterized protein OS=Gly...	[more]

BLAST of Spo04201.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
BH051_ARATH	2.5e-21	41.1	Transcription factor bHLH51 OS...	[more]
BH030_ARATH	2.1e-20	38.9	Transcription factor bHLH30 OS...	[more]
BH032_ARATH	4.6e-20	37.5	Transcription factor AIG1 OS=A...	[more]
BH106_ARATH	5.9e-15	37.6	Transcription factor bHLH106 O...	[more]
BH107_ARATH	5.9e-15	38.5	Putative transcription factor ...	[more]

BLAST of Spo04201.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
AT2G40200.1	1.4e-22	41.1	basic helix-loop-helix (bHLH) ...	[more]
AT1G68810.1	1.2e-21	38.9	basic helix-loop-helix (bHLH) ...	[more]
AT3G25710.1	2.6e-21	37.5	basic helix-loop-helix 32	[more]
AT2G41130.1	3.3e-16	37.6	basic helix-loop-helix (bHLH) ...	[more]
AT3G56770.1	3.3e-16	38.5	basic helix-loop-helix (bHLH) ...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	GENE3D	4.10.280.10		coord: 66..115 score: 7.4
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 67..112 score: 1.3
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 69..118 score: 3.2
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROFILE	PS50888	BHLH	coord: 63..112 score: 15
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	unknown	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 66..120 score: 1.96
None	No IPR available	unknown	Coil	Coil	coord: 102..122 score: -coord: 69..89 scor
None	No IPR available	PANTHER	PTHR12565	STEROL REGULATORY ELEMENT-BINDING PROTEIN	coord: 164..197 score: 3.5E-60coord: 56..144 score: 3.5E-60coord: 261..328 score: 3.5
None	No IPR available	PANTHER	PTHR12565:SF181	SUBFAMILY NOT NAMED	coord: 56..144 score: 3.5E-60coord: 261..328 score: 3.5E-60coord: 164..197 score: 3.5

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009651	response to salt stress
biological_process	GO:0008152	metabolic process
biological_process	GO:2000030	regulation of response to red or far red light
biological_process	GO:0010046	response to mycotoxin
biological_process	GO:0010224	response to UV-B
biological_process	GO:0007030	Golgi organization
biological_process	GO:0006816	calcium ion transport
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0009864	induced systemic resistance, jasmonic acid mediated signaling pathway
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016020	membrane
cellular_component	GO:0005634	nucleus
cellular_component	GO:0009504	cell plate
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0010008	endosome membrane
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0030247	polysaccharide binding
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0019899	enzyme binding
molecular_function	GO:0046983	protein dimerization activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo14295	0.72	Barchart \| Table
Spo17241	0.71	Barchart \| Table
Spo27031	0.71	Barchart \| Table
Spo26899	0.71	Barchart \| Table
Spo21362	0.71	Barchart \| Table
Spo01876	0.71	Barchart \| Table
Spo18589	0.71	Barchart \| Table
Spo07215	0.70	Barchart \| Table
Spo01225	0.70	Barchart \| Table
Spo27165	0.70	Barchart \| Table
Spo20562	0.70	Barchart \| Table
Spo17713	0.70	Barchart \| Table
Spo07784	0.69	Barchart \| Table
Spo01291	0.69	Barchart \| Table
Spo04129	0.69	Barchart \| Table
Spo14294	0.69	Barchart \| Table
Spo23852	0.69	Barchart \| Table
Spo24040	0.69	Barchart \| Table
Spo00710	0.68	Barchart \| Table
Spo13171	0.68	Barchart \| Table
Spo18475	0.68	Barchart \| Table
Spo02554	0.68	Barchart \| Table
Spo20380	0.68	Barchart \| Table
Spo25320	0.68	Barchart \| Table
Spo07515	0.68	Barchart \| Table
Spo20174	0.67	Barchart \| Table
Spo25350	0.67	Barchart \| Table
Spo02091	0.67	Barchart \| Table
Spo04741	0.67	Barchart \| Table
Spo21019	0.67	Barchart \| Table
Spo12369	0.67	Barchart \| Table
Spo08325	0.67	Barchart \| Table
Spo01226	0.67	Barchart \| Table
Spo00748	0.67	Barchart \| Table
Spo24818	0.66	Barchart \| Table
Spo15447	0.66	Barchart \| Table
Spo16648	0.66	Barchart \| Table
Spo04554	0.66	Barchart \| Table
Spo04379	0.66	Barchart \| Table
Spo04901	0.66	Barchart \| Table
Spo19888	0.66	Barchart \| Table
Spo05047	0.66	Barchart \| Table
Spo21018	0.66	Barchart \| Table
Spo09761	0.66	Barchart \| Table
Spo01629	0.66	Barchart \| Table
Spo09152	0.65	Barchart \| Table
Spo01686	0.65	Barchart \| Table
Spo22397	0.65	Barchart \| Table
Spo08419	0.65	Barchart \| Table