Spo04208 (gene)

Overview
NameSpo04208
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_01241 : 169215 .. 174848 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCACAAATAAATTGGCGAATTGTTCTATATACCCATTTTCAGATAGCGAAACCAAAATCTTGAGCATTGACTTAGGGTTTGAATTCCAATCGAAATCCGATCCCCAAATCCTCTCTCCTTTCTCTCTCTCTCTTCCATCAACAATGGCGATGCGAAGGTTCATCAACGAGCTACGAGGCGTTACAGTGAAGGAAGTCCCCGACAAGGTGAAACCAATGCTCTCATTCTCTTACCTCAAGGAATCATTCGCAAAAGGCATCGACAGCTACCATGCTAAACACATCGAGACGGATTCAATCATGCCTCTTTACCATGTTTGCTTTGGCGGCATGGCCTTCTCTTACCTCGTCGCTCTTCCTGAGGAACGCCGTCATCTCGAGCATGCTCAAAAGCATGACCATTGATCTTCCTCCATTTTCTGGTAATTTTGAAAATTTGCGTTTTATTTTAATCGATTCTAAATTTCCGTTTATATTTTTATTGTTTTAGAAATTTGAAGATTATTTTATTTTGTTTGGGTTTGATTTATGTGAAAGTTTTTGTTGAAATGTGGCTTTTGATCTTCTCGTTGTCCTTTTTGTTTGGATGGGATTTCCGATCTTTATGATTATCACGTAAATTTCATCCTTTCATTGTCTGGTTATATAATCCGTTTTAACATCTGTTTCGCATGTCAATTTTTTCGGGTTCTTTGTTTTGTTTTGGTTGAAATTCGATAATTTGGATTATGGTGATCGATTTGATTTCTTTGCTCTTGGCTGGAGGCATGTACTGATTAGTTATCACTCCTTTTAAGGTGAACTGTGGTTGCTTATTATCCGATTGTTGTTTGTTTCTTATATGGTTTGGTTCGAATCACTGAGGCGTTGTGTGGAACTTCCTTGTTTCTCTAATTAGAAGAAATATTGTTGAAAAATTGTATTGTTCATGTCTGATTCTTGGGCTGGGATTCCATTGTCTAGAAGTATATATTTGGTGTTTCACTTGACTACTATGGTTTAAGTAATTGATTGGTGATTACTTTTTGGGAAAGGAATCAAAGGCTTATTGAGGCATTGAACATTTGGAGATGCTTGTTATTTCCAGCTTTGGTCCAGTCATTAAACCGGAAAAACCAGTCTTGTATTAACATTAAGTACTACTGATAATCACTTGGTTAAGATTATGATTGTAATATTGTTGCTGGTATGTACTAAGAAAATTATCACAGCCGTGGCTGAACATTTGATTATCAATCTTAATTTCCGGAATCGTCAGTCATCACTGATTTTTGGTGAGAAGACCCTCAACAAGCCCTTTATAGTGTTAAGAGTTTATTTTGGAAATTCTTCATAGCTATGGTTTCTTCTACTCATCGGAGGTTCTATTATTACTGAGATCAGTTGCTTCAATGGTTGTATTCACATATTAGGAGTTAGGATGTAATTGGATCTCTGCAGGTGTTGATCTTCCTTCAAGGAGGAAGTCCCTCTTTTAGGTTGGAAAACTTTTTTTCTGAACCTTTTTGAAGGTTGGCTCTTAGGAGAAGTTGCAAGAGTATTCTATTCTGAGTTTTGTAGTTATGTCAAGGTAAAAGGGATCCAACAAGTAAGACTCCTCTAGTTCATTTAATGTAGAGAGGATAGAGTAGTTCTTCAAAACTGTGGATTGCAAGTTTTGTTTGGGAAAATCGGAGGAAAAGAGATGCATTGAGTATTTAACTCGTGATATTCAATGCTGGAATTTGGGATGATAGTTCGAGTCTCACCTGGACTCTTCAGTTTACCTCAAATTCCCGTGTCAGATCCTCGACACTTGGACATCGGTATGGATACTTGGACACATCATTTTGGACCAAAATCATGCAACTTTCACAAAATAGCTTTCACAAACTAGGAGTGTCCCATACACAGACACGCACGAGTCTCCGATATGGGTATCCGAGTCCGGGTAACATAGGTTGGAGTCTCACTATAAAAAATTTAATCTGAAGGAGACTAAATACATGAATAATAGCTTGGGGGGTTTAAAAACTTACACTGAGTTTGAGCATCCTCCTTATGAGGACTTTTGTTGAGTCACAAAGGACAGGAAGACTTTGTAAGGTTGTGTGAACCAAGAATCTGTGAAGCTAATATGAATCCAGGTCCTTGGTACTGCACACTAGCAAGCTCAAGGTCTCACTATTTATGGTAGGCCTCACCATTTTCCTTCAACAATTTTGGCATCCAGTGTTTCAATTTGATATCAATGCAAGATATCCATTCCAGTATTGGCATCTACCATTAACATCTTGGCTGAATTCTTGGTATTTTTGTTTTAGTTGAAATTCAATGACTTGGGTTATAGTGATCGATGGGATTTCTCTCTTCTAGGCTTGGGCTCACAATTCTTGTTCGTTTGTTATTTTGTTTCAGTCAGAATAAAGGCGTTGTGTAGAGTACCCTTGTTTCTCTAAATAGAAGAAATTCTGATGAACAAATTGTATTGTGAATGCCTGATGCTTTGGTCGGGAATATCGGGATTCCTTTGTCTAGAAGTATTTGATGTTTCACTTGATGAATAGGGTTTAGTTTCGATTGGCAATTACTTTGTGGGCAAAGAATCAGATGCTTATTGAGGCTTGACACCTTTGAAAATGGTGGACTGTACACTTTGGAGTTGGCTTAACTTACTTCTAGACTGGTTGTATCACTCCTTTTTTTCTGTATCAGAAATGTTTTCTGGAGAATAAATCTCACATTTCTACCTATTTAGATTCTGAGCTTGAATGAGCAGCTCAACGGTTGTAGAGAGCTTCAATTAATCATGCCTATTTTCAGTTATATTGTTTTGTTACTTCTGATATGTGAGACTAATTAGTTAAACTGTGACATAATTGGCTTATGCTGCTTGTATTCGTTTAGCAGCGGTATGTGTCCAAGTGTAACACACGCCTTTCTTTAATGAAAATATTGCACGATTTTGTTCCAAGCGGCATATCCGTGTCTGGTTCTCGAGTATTTGGTACGGGTGTTTAAGCTAAATGAAGTCTCTGAATAGTATAGTAGTAGTCGGCTGCACTTGCTTATTAGACATGAGAGTGTCTGCAGTTATGTGGATTTTGGATAGTGGTTGTAGCATACAATTGATCAATACTTTAATAAGACCTTGGCCATGAAGAGCAATCGTTACCTGACCTCATCAAGTGGAGCTGGTTTTCTTTTAGTTTTTTCCCATGCATGCGGTTGTGGGTGTGGTTGTTGTGTGCATGCGTGTAACCCTTAAATAGAAATCTAGGGGAAGTTAGTATCTTCTATCTAATTTATAGCATTTAATATAGGTTTGTGAAATGTGTGAAACGTCATTGACCCTTTCTCAAACTATTGGTCATAATGTTGCTTGTGATAATTAACGAATCTTATGAGAGTGGGTTGTGGCGTTGTGCAATGTGGTGTATTGGAGAGAACTCTTTGTTTTTGTTTTATTTTGGGTTTTTTGTTCCCTCGGAGTTTGGAGCATTAACAGAATTCAGGTTTGAAACTCACTTTTAAATATATTGATGACCCTATAGATGTTTGCTTTGATGATGTAGAGAAAAACGAGGAGAAATCTAGACCGGGGCTTTCAGTGGGGTAATTGAACACTTCTATCAGACGCGGAAGTTATGGTTGATATATTTGAAAAATTATTTTGACCAAAGTTATGGAAGTGAATGTAACTACTTACATCAGTTGGTATGAAAGACATGCTTAATTAGTCGATCAGGTAATTGACCAAGATTGAGTTGGTAATTCTGATTTAACGAGGCGTTTTAACCTATTTACTACTGCAAACCCAAATCCAACTGTTGTTAACAAAACCAATCTTAAGCCCAACTGAAGGACTTAGATTCTTAGACTTCTATCTTTTTTTTATTTTGACACATTCTACAGAAAAATTTAGAGATTTGTATTTCCTCTGCCTTTGAATGTACATAGGGTCTCTCTTTTGTTCTAGCCGATCTCTGTATTGGTGTTTTTTTTATGGGTTGCTGTTACAAACATGGCTCCTATATATCAAATAATAAATATTCCTTTTCATGTGGTCTACCGGCTGCTGCTCAATCAGTTAGTTACAAAATACCATTTAACTCTATGGCGTCTATGGTGTCATCAATATCCGTACGTGTGATTTTTCGGTCATAGGTTTTCACCTTTACCCCCTTCGATCAAGAGATACTTTAAATCAAATATATATTTATGTTTCTAAAATAAAAAAAATGTATGGAACAACATTTTTTTAAAATTCACGAATCGGGTTGATAAGCTAAACCAGATAGTTATACGAGTGAAAGAAAATACCTTTAGATTTGCTGGAAATAAACCTAATCTCATTGCATATGTGCAAGGGTTAAACGAAAATAAACATAGGCAGTCAAGGTTTTGTCCCCCAACCTTGATTAAACTTGTCTTTAATAGGAATAACTTTGGTGTTGGATTGTCCCCTTCCGTTGAATATTTCTATCTTAGGGTTTGACATATACTCAAGCTCATGACTGAAAACTAATTTCCTGGAAGAGGTAAGATTTTGGAACTTTTTTAATTATTTGGTAAATGATCTGTTTGGTTCTTATAGCCATAGGCCCGTAACATGTCCATCCTTTAATTGCTTAAGATTGTTTCTGTTTATGGAGGTAATTGCTTTCGGCCTTTCGGGTATTGTTTGACTGTTGTTTTGGAGATTATTGTTGTTAGAAGTTGATTGTTTTTATGGTTTAATTTATCACGAATGTTGGTTGTCCTTTGCTATAGAATTTTCTTTCCAGATGAATTGCAAGACTTATCTTACCAAATCCGAATTTTCCAGGACTGTTGAAGTCTGTCTTGGAGGCTGCTGCAGTCTGTCAAGATTATCTTTGTTGCTTTGCCAGTTGAATTTACAAATGTATTGTTTCACAGTGCAAACTGAAAAAATAATTTTTGAGAACCCATTTTGATGGCGAGGATGATATTGTAAACCTCTGGAAATCAATTGGATCATGTTCTACATGTTGCAGATTTTTCTCCAGTTTTATGAAACTGTATCGTTTAACCATCCCCTTTTGCTATTTTATTCCTTCTCACTCATGTTGTCAGGCACACGGCCTGTCCGAGGAACATGTTTCTTATTGTTTGATAATTCGTGTCATGCTTGTAGAATGCATATTTCTAGTGCCATTCGATAATAATGGAACCTCGATAGTTTTTGGTGAAGCAATGGCCAAATTGTTACCCATTATTATCTCAGTCTTTTCACTAGTAAGCGCTGTAAGACTGAAAAATCTGGTCTTCAAGACCTTAGGGCTTAGCCGCTTAGGTACTCTGATTTCAAAATGTTATACGAAGTAACTCTGTCCGGTTTGAAATAATTGGGGTAGTTTACCTTTTCATGTTTGTCAATGTAAATGTTTAAACCATGATATTTTTAGTTTTGTATTTGTAAAAATTATAAAAAAAGTTGATATTTTGAAAGTATATATATTGAGACAAGTGAAACAAGGCTGCACATGGCTATTTTTCCTTGCCCATAAATCACAAATGATAGTCAAAATGAATTTGAGAATAGTTTTAAAAGTGAAAGTGTCCATATTATTTAGAAATGGAGGGAGTATTACTTGTGAAAAATTCAAAGTATTTATCCACCAAACACCCCGG

mRNA sequence

TCCACAAATAAATTGGCGAATTGTTCTATATACCCATTTTCAGATAGCGAAACCAAAATCTTGAGCATTGACTTAGGGTTTGAATTCCAATCGAAATCCGATCCCCAAATCCTCTCTCCTTTCTCTCTCTCTCTTCCATCAACAATGGCGATGCGAAGGTTCATCAACGAGCTACGAGGCGTTACAGTGAAGGAAGTCCCCGACAAGGTGAAACCAATGCTCTCATTCTCTTACCTCAAGGAATCATTCGCAAAAGGCATCGACAGCTACCATGCTAAACACATCGAGACGGATTCAATCATGCCTCTTTACCATGTTTGCTTTGGCGGCATGGCCTTCTCTTACCTCGTCGCTCTTCCTGAGGAACGCCGTCATCTCGAGCATGCTCAAAAGCATGACCATTGATCTTCCTCCATTTTCTGGACTGTTGAAGTCTGTCTTGGAGGCTGCTGCAGTCTGTCAAGATTATCTTTGTTGCTTTGCCAGTTGAATTTACAAATGTATTGTTTCACAGTGCAAACTGAAAAAATAATTTTTGAGAACCCATTTTGATGGCGAGGATGATATTGTAAACCTCTGGAAATCAATTGGATCATGTTCTACATGTTGCAGATTTTTCTCCAGTTTTATGAAACTGTATCGTTTAACCATCCCCTTTTGCTATTTTATTCCTTCTCACTCATGTTGTCAGGCACACGGCCTGTCCGAGGAACATGTTTCTTATTGTTTGATAATTCGTGTCATGCTTGTAGAATGCATATTTCTAGTGCCATTCGATAATAATGGAACCTCGATAGTTTTTGGTGAAGCAATGGCCAAATTGTTACCCATTATTATCTCAGTCTTTTCACTAGTAAGCGCTGTAAGACTGAAAAATCTGGTCTTCAAGACCTTAGGGCTTAGCCGCTTAGGTACTCTGATTTCAAAATGTTATACGAAGTAACTCTGTCCGGTTTGAAATAATTGGGGTAGTTTACCTTTTCATGTTTGTCAATGTAAATGTTTAAACCATGATATTTTTAGTTTTGTATTTGTAAAAATTATAAAAAAAGTTGATATTTTGAAAGTATATATATTGAGACAAGTGAAACAAGGCTGCACATGGCTATTTTTCCTTGCCCATAAATCACAAATGATAGTCAAAATGAATTTGAGAATAGTTTTAAAAGTGAAAGTGTCCATATTATTTAGAAATGGAGGGAGTATTACTTGTGAAAAATTCAAAGTATTTATCCACCAAACACCCCGG

Coding sequence (CDS)

ATGCTAAACACATCGAGACGGATTCAATCATGCCTCTTTACCATGTTTGCTTTGGCGGCATGGCCTTCTCTTACCTCGTCGCTCTTCCTGAGGAACGCCGTCATCTCGAGCATGCTCAAAAGCATGACCATTGATCTTCCTCCATTTTCTGGACTGTTGAAGTCTGTCTTGGAGGCTGCTGCAGTCTGTCAAGATTATCTTTGTTGCTTTGCCAGTTGA

Protein sequence

MLNTSRRIQSCLFTMFALAAWPSLTSSLFLRNAVISSMLKSMTIDLPPFSGLLKSVLEAAAVCQDYLCCFAS
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo04208.1Spo04208.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo04208.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo04208.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo04208.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo04208.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009060 aerobic respiration
biological_process GO:0050790 regulation of catalytic activity
biological_process GO:0009909 regulation of flower development
biological_process GO:0006275 regulation of DNA replication
biological_process GO:0051726 regulation of cell cycle
biological_process GO:0051567 histone H3-K9 methylation
biological_process GO:0016458 gene silencing
biological_process GO:0006268 DNA unwinding involved in DNA replication
biological_process GO:0006270 DNA replication initiation
biological_process GO:0006306 DNA methylation
biological_process GO:0000911 cytokinesis by cell plate formation
biological_process GO:0008283 cell proliferation
biological_process GO:0006096 glycolytic process
biological_process GO:0042176 regulation of protein catabolic process
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0051788 response to misfolded protein
biological_process GO:0046686 response to cadmium ion
biological_process GO:0080129 proteasome core complex assembly
biological_process GO:0009853 photorespiration
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
cellular_component GO:0005657 replication fork
cellular_component GO:0005634 nucleus
cellular_component GO:0000502 proteasome complex
cellular_component GO:0005840 ribosome
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0005747 mitochondrial respiratory chain complex I
cellular_component GO:0042555 MCM complex
molecular_function GO:0005524 ATP binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0036459 thiol-dependent ubiquitinyl hydrolase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0008234 cysteine-type peptidase activity
molecular_function GO:0030234 enzyme regulator activity
molecular_function GO:0005488 binding
molecular_function GO:0003678 DNA helicase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo156660.81Barchart | Table
Spo055890.79Barchart | Table
Spo252660.78Barchart | Table
Spo023800.76Barchart | Table
Spo223940.76Barchart | Table
Spo105990.75Barchart | Table
Spo188420.75Barchart | Table
Spo123110.75Barchart | Table
Spo115920.75Barchart | Table
Spo028380.74Barchart | Table
Spo217540.73Barchart | Table
Spo046670.73Barchart | Table
Spo058490.73Barchart | Table
Spo245320.73Barchart | Table
Spo157510.72Barchart | Table
Spo009000.72Barchart | Table
Spo156040.72Barchart | Table
Spo148750.72Barchart | Table
Spo132790.72Barchart | Table
Spo259540.72Barchart | Table
Spo120480.72Barchart | Table
Spo232410.72Barchart | Table
Spo119430.71Barchart | Table
Spo166270.71Barchart | Table
Spo261100.71Barchart | Table
Spo264210.71Barchart | Table
Spo062680.70Barchart | Table
Spo051590.70Barchart | Table
Spo134120.70Barchart | Table
Spo043810.70Barchart | Table
Spo057830.70Barchart | Table
Spo282890.70Barchart | Table
Spo209970.69Barchart | Table
Spo089610.69Barchart | Table
Spo042820.69Barchart | Table
Spo180940.69Barchart | Table
Spo199670.69Barchart | Table
Spo144470.68Barchart | Table
Spo083340.68Barchart | Table
Spo230380.68Barchart | Table
Spo281520.68Barchart | Table
Spo081600.68Barchart | Table
Spo159390.68Barchart | Table
Spo122650.67Barchart | Table
Spo065880.67Barchart | Table
Spo219220.67Barchart | Table
Spo223100.67Barchart | Table
Spo034730.67Barchart | Table
Spo256690.67Barchart | Table
Spo016170.67Barchart | Table
Spo000070.67Barchart | Table
Spo123040.67Barchart | Table
Spo251810.66Barchart | Table
Spo105980.66Barchart | Table
Spo232920.66Barchart | Table
Spo042190.66Barchart | Table
Spo138560.66Barchart | Table
Spo186470.66Barchart | Table
Spo063310.66Barchart | Table
Spo252890.65Barchart | Table
Spo247030.65Barchart | Table