Spo04254 (gene) | SpinachBase

Overview


Name	Spo04254
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Unknown protein
Location	Super_scaffold_150 : 1625330 .. 1629547 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAACATCCAACACCTCTAGTACCCAAGTATTTCTCAAAATTTTAAATTGGTGAAATAAAAATACAATCGTATTAATTCACTGTATGAAATACGAATATCTTTGTTTCCAAATATTGTGTAATGTCAACACCTACTAGTTGTTGCATACAAATTAGTACTCCATAATAGGAGAAAGAACGTGTAAAAATCGGACAACATATGCAATGACATTAATCACCCAATAATATAAGTGGCCATTAAAATATTATAAGTATTCCATGGAATTGAAGTGACAAATTTTGCAAAAAAAAAAAAAAAGTGACAAATTTTTGCGGACTAAATGTGGGTCTTCATGCAAAGATTTATGAACACAAATAAAATAAAGTTGAAATGTTAACAATTTTATATAACAGACTAATTAATACGAAGTATTCGATTAGGAAAGAAAAACTATAATAAGAAAATAGAGATGGGGCATTCCGAGAATTGAACTCGGGACCTCTCGCACCCTAAGCGAGAATCATACCACTAGACCAAATGCCCATTGTTGAATCCTGAAGAAACTTATAGTTATATAAATTGTTGTAATTAGAATGGGCCTGAATGCCTAACACGGTTCCTAGGACTACTCGAAAACAAATCAAACATAGTAATTGTGACCCAAATCAATTAATCAATCAAACATACAAAACTGCAATTCATTTTTAGGGTTCTTTCAGAAATCGGATCAAAAGAGGAGAGAGAAAAAGGAGAGCATTGAAAAAATGGTAGGAGCATCATCAACAGGAATGTTCAAGTTTTTGAAGCCAACGATGCGACCTCAAACAACCGATATTAAAGCCGCCGTTGGTTGGGGTGTCGCCGCCGCCACCGGAGGCCTTTATCTCGTCCAGGTTTTTTTTTCCTCTCCTCCCCCATTTTCAAACTTGTAGCTTGATTCAAATTTCATATTTTGCTTATTATTTCAATTTGTCTTTTAGATTGAATGGGATTTATTTGAGGGATGATGAACCCCTTTTAATTTTGATTTGAAAAAAACTTGGGATTAGATCTGTCGGATGTGAATTGATGTGATATGATTTTTTTGCATGTGGTTTTTGGGTTTCTGTTGATTTACATCTATAAAACGTGGGTGGTTGGGTAGGAATGAAAGGTTGACTGAGTTGTTGAAGGGTATTAATTGCATAATTTGATGAATTTATGTGTTGCTGTTTATGGGTTTAAATCAGTGGGATAGTAGAAGATTTTAATGATGATATTGGTGAGGAACCGTGAATTGCTTGAATTATGTGGTTGTTTTTTTCGGGTTCAATTCATGTTATTCAGATTGTTCCTTACATCTCAATTGCCTGTGCCGTATCCTCGGTATTCTGACATGTGTATGGATTCTTTGATGCTTCATTTTGGATAAAGAAACTTGGAACTCTGGTATAAAATTGTCATGTCTATTGCTTAGACATATATTTGTGTCTGATATGAGTTTGAGAGTCTAAATAATGTAGTTTATACCCATCTTGTTGGGTAATACATGGGATTTGGGAATTTGGATCAGATATAATAACCCAAAAGAATTGCACTCGGATGGATGAAGTCTAGATGTGCCGGCTTGTTTTTGGAGTTTTTCTTTTCAATCAAAGCACATAGGTTGAAACTTTAGCTTACCGGTTGATCAGTTGAATCAAATGGTTTTTTTTATTCTTAACCTTTAGTATCGTTAGATACTACATTTACTGGTTTATGATAGTTTGCAATTGTTTCACTCATTCCTTTGATGCAATGCTGCTATGTGTTGGCAAACACTTGAGCAGTAAATTTTGTAATATTTTTGAAATTCAGTGTACTCCTTTGTCTAATTAGGATTCTAATGACATTATTTGTGATAAATGAAGCAGTGATGAGTAAATACAAACCTGTAATGACCTGCAGCTCATTTATGAACTTCTAAGGGACTGAGAGTTTTTTTCACCAGTTTGTTTTTACTTTGTAAATAGTTCCGTGGAACTTATTAGTTGCTTTTTTGGGCTACTGTACCACTCTCCACTTTTTTTTCTTTTTTATTTTGACAGCGGCGCTATACAACCATTTTATTAATGTTGTTGAATAATCTTTTGAGATTCAAGAGATTTCAAAATTCCATAAGTCGGAACTGCTCTTGAGGATGCAGAAAACATCTTCGTATTTGAAAAGTTTGACACAAGTTTTGATGCATGGAAACCTCTTGAGTCTTGATGTACATACAATATTGCATTTCTGGTTGGGGTTTCGTATTTCCGATTCTTTGTTTTCATTAATTAATAAACAGGTGGGAGGAGACTAAGCCTTAGAGAGATGTAAGCTTCGTTTTCCTAATTCTTATTGTGAAAATATAAGTTCAAATAATTTAAGGTCATGGGCTCATTTCTGATACCAGTGATAAGTTTAAATAAGTTAAGTTTAGGGTCATTAAGTTCAAATTGGTCAAGTGCAGGGCTAATGCGTTAAGATAAGTTCAGGTAAGTTAACTTTAGGGCTTATAGGTTAAGATAAGTTCATGTAAGAGAAGAGAACATGCCCATTGGGGAAAAGGTGCTGGTCAGATATTTGTGTAAAGCATTGATGACACCAAGTCACCAAGTATGCTGTTGGTTTATGTAGGATCTCACAAATGATTTCTAATCTTAGTTACAATTCCAGTTAGGAACTCCGTTGTTGTTTGAAGCTGGTGATGTTTACTCATAAATCCTGCTTTGAAGTGTGCATATTTGTTGTTTTTAGTTTAATTTCTTTTACATAAAAGCGAATTAAATGTACGTGATTTTCTTTTCAGTCTTGGATATCCAAAACAAATTTATTACAATGTGTGTTGGTGTGTATACACTATCTGGAGTTGTTCTGCACATCTTTAGTTTGAATAGGGTTCAAGCGGAGGGGATTCCTCTGATAATGAATTTGATTGGTGTTTTAAGACTAATTATGCATGGAACTTGGACATGGATAGTAACAACATCGTTTAGCTGTAGGAGGTGTATAACAGATTCATTGGATTGGAATTCAGTAATATTTGGCACCTCAGCGTGATTGCATATTTTAATTTGCTGATAATGGAATGTTATAGGTACATTGCATGCTTTCATTGTAGCCTTATACCAATGAGGTTGCTTTATTACTGAGGAAAGGAACATCATGTAGTTTAAATCTGTCTTGTTTTTTTGAAGTTGGTTTGAATCTGTCTTAATAAATGCTGTTGTGTGAGATTTTCTGGCATGGACTAACCCAAGTAATTATATTTTAGATGGAAACTTGCCAGTCTGAATTTTTAGGTGATGATGATTAAGAATTCTGTTCCATGTTATGGTTGATTCCTACGTTGTATACATATGATCTCATTTGTTGGTATATGGGCATGAGTTAATTTTGTCACTTTACATGAATATTAGTTAACATGCCATTTTGACCTTATTTAACTTATTTGTGTTGTTTGTGACAGCCCTGGGGTTGGATCAAGAGGACTTTTATTGACAAGCCAGAAGAGGAGAATAAATGAAGTTGAAGCTTTGCCAAAATCCTCCTTGTGGTCTTGGAAGAATATTGTACCCAGCCTTGAAATCTAATAATACGTTATGGTTTTTACTATTTCCTGTCTAAGAGATGGCGAGGCTTTTTGGTGTTAGTTTTTGCAATCAACATTGAAACTAATTTAGACGGATTACAGTTATATCCTTTCAATGATTCATTTCATTTTTGCAAATTGCAATAAGCACTCTCAACACTATTGGAGATGGGTTTCTGGTTTAAATCTAAAGCTAAATGTATGATGTATTTAGTTTAGCCGATTTTGTTAAAGTTTGAGAGACTGTTTCATTTCAGTTGTGTCCTACTAGTAAGTGTCTGTTTTAGAGCTGTGTTGCACGTATTAGGATTCGACTCTTTCTGGAAGGCCTTGTGTTGCCCTCACGTTTCTCTACTAGTAACTAGTAAGTGTTGCTGTGTTGTCGGTTTTCAACAATCATTTGTGGTGGCTCGGGGATTGATTTCAGCACAGGGGAACTACTTTTTAATCTGTCATAACCTCAAATCATGTCCGCAAATCTTAGCTGAAAAGGTCAAGTTGAGTCCACCATACACCCACCACTCCACCACCGTTGTCCTGACTCCTGCTGCTACTCAAAAGGATTGACAAAATTTAAGGGATAAGAAAAATACGATTAAGTACTTTTGAGTCCTCTATTATGAGTTGATAAATACTTATACTTGAC

mRNA sequence

ATGTCAACATCCAACACCTCTAGGTTCTTTCAGAAATCGGATCAAAAGAGGAGAGAGAAAAAGGAGAGCATTGAAAAAATGGTAGGAGCATCATCAACAGGAATGTTCAAGTTTTTGAAGCCAACGATGCGACCTCAAACAACCGATATTAAAGCCGCCGTTGGTTGGGGTGTCGCCGCCGCCACCGGAGGCCTTTATCTCGTCCAGGAGGTGTATAACAGATTCATTGGATTGGAATTCAGTAATATTTGGCACCTCAGCGTGATTGCATATTTTAATTTGCTGATAATGGAATGTTATAGCCCTGGGGTTGGATCAAGAGGACTTTTATTGACAAGCCAGAAGAGGAGAATAAATGAAGTTGAAGCTTTGCCAAAATCCTCCTTGTGGTCTTGGAAGAATATTGTACCCAGCCTTGAAATCTAATAATACGTTATGGTTTTTACTATTTCCTGTCTAAGAGATGGCGAGGCTTTTTGGTGTTAGTTTTTGCAATCAACATTGAAACTAATTTAGACGGATTACAGTTATATCCTTTCAATGATTCATTTCATTTTTGCAAATTGCAATAAGCACTCTCAACACTATTGGAGATGGGTTTCTGGTTTAAATCTAAAGCTAAATGTATGATGTATTTAGTTTAGCCGATTTTGTTAAAGTTTGAGAGACTGTTTCATTTCAGTTGTGTCCTACTAGTAAGTGTCTGTTTTAGAGCTGTGTTGCACGTATTAGGATTCGACTCTTTCTGGAAGGCCTTGTGTTGCCCTCACGTTTCTCTACTAGTAACTAGTAAGTGTTGCTGTGTTGTCGGTTTTCAACAATCATTTGTGGTGGCTCGGGGATTGATTTCAGCACAGGGGAACTACTTTTTAATCTGTCATAACCTCAAATCATGTCCGCAAATCTTAGCTGAAAAGGTCAAGTTGAGTCCACCATACACCCACCACTCCACCACCGTTGTCCTGACTCCTGCTGCTACTCAAAAGGATTGACAAAATTTAAGGGATAAGAAAAATACGATTAAGTACTTTTGAGTCCTCTATTATGAGTTGATAAATACTTATACTTGAC

Coding sequence (CDS)

ATGTCAACATCCAACACCTCTAGGTTCTTTCAGAAATCGGATCAAAAGAGGAGAGAGAAAAAGGAGAGCATTGAAAAAATGGTAGGAGCATCATCAACAGGAATGTTCAAGTTTTTGAAGCCAACGATGCGACCTCAAACAACCGATATTAAAGCCGCCGTTGGTTGGGGTGTCGCCGCCGCCACCGGAGGCCTTTATCTCGTCCAGGAGGTGTATAACAGATTCATTGGATTGGAATTCAGTAATATTTGGCACCTCAGCGTGATTGCATATTTTAATTTGCTGATAATGGAATGTTATAGCCCTGGGGTTGGATCAAGAGGACTTTTATTGACAAGCCAGAAGAGGAGAATAAATGAAGTTGAAGCTTTGCCAAAATCCTCCTTGTGGTCTTGGAAGAATATTGTACCCAGCCTTGAAATCTAA

Protein sequence

MSTSNTSRFFQKSDQKRREKKESIEKMVGASSTGMFKFLKPTMRPQTTDIKAAVGWGVAAATGGLYLVQEVYNRFIGLEFSNIWHLSVIAYFNLLIMECYSPGVGSRGLLLTSQKRRINEVEALPKSSLWSWKNIVPSLEI

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo04254.1	Spo04254.1	mRNA

Homology

[Close]

BLAST of Spo04254.1 vs. NCBI nr
Match: gi|902160354|gb|KNA06435.1| (hypothetical protein SOVF_181170 [Spinacia oleracea])

HSP 1 Score: 89.7 bits (221), Expect = 4.300e-15
Identity = 43/43 (100.00%), Postives = 43/43 (100.00%), Query Frame = 1

		  
Query: 27 MVGASSTGMFKFLKPTMRPQTTDIKAAVGWGVAAATGGLYLVQ 70
          MVGASSTGMFKFLKPTMRPQTTDIKAAVGWGVAAATGGLYLVQ
Sbjct: 1  MVGASSTGMFKFLKPTMRPQTTDIKAAVGWGVAAATGGLYLVQ 43

[Close]

BLAST of Spo04254.1 vs. NCBI nr
Match: gi|870866446|gb|KMT17428.1| (hypothetical protein BVRB_2g038800 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 77.0 bits (188), Expect = 2.900e-11
Identity = 35/43 (81.40%), Postives = 40/43 (93.02%), Query Frame = 1

		  
Query: 27 MVGASSTGMFKFLKPTMRPQTTDIKAAVGWGVAAATGGLYLVQ 70
          M GAS++GMFKFLKP+MRPQ +DIKAAVGWGVAAAT G+YLVQ
Sbjct: 1  MAGASASGMFKFLKPSMRPQPSDIKAAVGWGVAAATAGIYLVQ 43

[Close]

BLAST of Spo04254.1 vs. NCBI nr
Match: gi|1351365|sp|P48505.2|UCR11_SOLTU (RecName: Full=Ubiquinol-cytochrome c reductase complex 6.7 kDa protein; Short=CR6)

HSP 1 Score: 61.2 bits (147), Expect = 1.600e-6
Identity = 25/40 (62.50%), Postives = 34/40 (85.00%), Query Frame = 1

		  
Query: 30 ASSTGMFKFLKPTMRPQTTDIKAAVGWGVAAATGGLYLVQ 70
          A+  G+FKFL+P +RPQ+TDI+AA GWGVAA TG L+++Q
Sbjct: 6  AAGNGLFKFLRPKLRPQSTDIQAAAGWGVAAVTGALWVIQ 45

[Close]

BLAST of Spo04254.1 vs. NCBI nr
Match: gi|293336024|ref|NP_001169741.1| (uncharacterized LOC100383622 [Zea mays])

HSP 1 Score: 60.1 bits (144), Expect = 3.700e-6
Identity = 28/45 (62.22%), Postives = 33/45 (73.33%), Query Frame = 1

		  
Query: 30 ASSTGMFKFLKPTMRPQTTDIKAAVGWGVAAATGGLYLVQEVYNR 75
          ASS+G+F+F+ P  RPQ+TDI AA  WGV A T GLYLVQ   NR
Sbjct: 5  ASSSGLFRFVSPRSRPQSTDIVAAASWGVFAGTAGLYLVQVRINR 49

[Close]

BLAST of Spo04254.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QGT9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_181170 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.000e-15
Identity = 43/43 (100.00%), Postives = 43/43 (100.00%), Query Frame = 1

		  
Query: 27 MVGASSTGMFKFLKPTMRPQTTDIKAAVGWGVAAATGGLYLVQ 70
          MVGASSTGMFKFLKPTMRPQTTDIKAAVGWGVAAATGGLYLVQ
Sbjct: 1  MVGASSTGMFKFLKPTMRPQTTDIKAAVGWGVAAATGGLYLVQ 43

[Close]

BLAST of Spo04254.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CZV4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g038800 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.000e-11
Identity = 35/43 (81.40%), Postives = 40/43 (93.02%), Query Frame = 1

		  
Query: 27 MVGASSTGMFKFLKPTMRPQTTDIKAAVGWGVAAATGGLYLVQ 70
          M GAS++GMFKFLKP+MRPQ +DIKAAVGWGVAAAT G+YLVQ
Sbjct: 1  MAGASASGMFKFLKPSMRPQPSDIKAAVGWGVAAATAGIYLVQ 43

[Close]

BLAST of Spo04254.1 vs. UniProtKB/TrEMBL
Match: A0A0V0GX45_SOLCH (Putative ubiquinol-cytochrome c reductase complex 6.7 kDa protein-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.100e-6
Identity = 25/40 (62.50%), Postives = 34/40 (85.00%), Query Frame = 1

		  
Query: 30 ASSTGMFKFLKPTMRPQTTDIKAAVGWGVAAATGGLYLVQ 70
          A+  G+FKFL+P +RPQ+TDI+AA GWGVAA TG L+++Q
Sbjct: 6  AAGNGLFKFLRPKLRPQSTDIQAAAGWGVAAVTGALWVIQ 45

[Close]

BLAST of Spo04254.1 vs. UniProtKB/TrEMBL
Match: M1BUD9_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400020601 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.500e-6
Identity = 25/40 (62.50%), Postives = 34/40 (85.00%), Query Frame = 1

		  
Query: 30 ASSTGMFKFLKPTMRPQTTDIKAAVGWGVAAATGGLYLVQ 70
          A+  G+FKFL+P +RPQ+TDI+AA GWGVAA TG L+++Q
Sbjct: 6  AAGNGIFKFLRPKLRPQSTDIQAAAGWGVAAVTGALWVIQ 45

[Close]

BLAST of Spo04254.1 vs. UniProtKB/TrEMBL
Match: K4BIZ6_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.500e-6
Identity = 26/43 (60.47%), Postives = 33/43 (76.74%), Query Frame = 1

		  
Query: 27 MVGASSTGMFKFLKPTMRPQTTDIKAAVGWGVAAATGGLYLVQ 70
          M  A+  G+FKFL P  RPQ+TDI+AA GWGVAA TG L+++Q
Sbjct: 1  MTTAAGNGLFKFLSPKRRPQSTDIQAAAGWGVAAVTGALWVIQ 43

[Close]

BLAST of Spo04254.1 vs. ExPASy Swiss-Prot
Match: UCR11_SOLTU (Ubiquinol-cytochrome c reductase complex 6.7 kDa protein OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 61.2 bits (147), Expect = 1.000e-8
Identity = 25/40 (62.50%), Postives = 34/40 (85.00%), Query Frame = 1

		  
Query: 30 ASSTGMFKFLKPTMRPQTTDIKAAVGWGVAAATGGLYLVQ 70
          A+  G+FKFL+P +RPQ+TDI+AA GWGVAA TG L+++Q
Sbjct: 6  AAGNGLFKFLRPKLRPQSTDIQAAAGWGVAAVTGALWVIQ 45

The following BLAST results are available for this feature:

BLAST of Spo04254.1 vs. NCBI nr
BLAST of Spo04254.1 vs. UniProtKB/TrEMBL
BLAST of Spo04254.1 vs. ExPASy Swiss-Prot
BLAST of Spo04254.1 vs. TAIR (Arabidopsis)

BLAST of Spo04254.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 4

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902160354\|gb\|KNA06435.1\|	4.3e-15	100.	hypothetical protein SOVF_1811...	[more]
gi\|870866446\|gb\|KMT17428.1\|	2.9e-11	81.4	hypothetical protein BVRB_2g03...	[more]
gi\|1351365\|sp\|P48505.2\|UCR11_SOLTU	1.6e-6	62.5	RecName: Full=Ubiquinol-cytoch...	[more]
gi\|293336024\|ref\|NP_001169741.1\|	3.7e-6	62.2	uncharacterized LOC100383622 [...	[more]

BLAST of Spo04254.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9QGT9_SPIOL	3.0e-15	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CZV4_BETVU	2.0e-11	81.4	Uncharacterized protein OS=Bet...	[more]
A0A0V0GX45_SOLCH	1.1e-6	62.5	Putative ubiquinol-cytochrome ...	[more]
M1BUD9_SOLTU	1.5e-6	62.5	Uncharacterized protein OS=Sol...	[more]
K4BIZ6_SOLLC	1.5e-6	60.4	Uncharacterized protein OS=Sol...	[more]

BLAST of Spo04254.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
UCR11_SOLTU	1.0e-8	62.5	Ubiquinol-cytochrome c reducta...	[more]

BLAST of Spo04254.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015995	chlorophyll biosynthetic process
biological_process	GO:0007030	Golgi organization
biological_process	GO:0006000	fructose metabolic process
biological_process	GO:0007010	cytoskeleton organization
biological_process	GO:0006465	signal peptide processing
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
biological_process	GO:0007033	vacuole organization
biological_process	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic
biological_process	GO:0000902	cell morphogenesis
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0016049	cell growth
biological_process	GO:0046907	intracellular transport
biological_process	GO:0006782	protoporphyrinogen IX biosynthetic process
biological_process	GO:0006412	translation
biological_process	GO:0001510	RNA methylation
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006470	protein dephosphorylation
biological_process	GO:0009298	GDP-mannose biosynthetic process
biological_process	GO:0006096	glycolytic process
biological_process	GO:0009767	photosynthetic electron transport chain
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0008152	metabolic process
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0006506	GPI anchor biosynthetic process
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0015991	ATP hydrolysis coupled proton transport
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006972	hyperosmotic response
biological_process	GO:0019521	D-gluconate metabolic process
biological_process	GO:0006833	water transport
biological_process	GO:0019932	second-messenger-mediated signaling
biological_process	GO:0009266	response to temperature stimulus
biological_process	GO:0010498	proteasomal protein catabolic process
biological_process	GO:0019307	mannose biosynthetic process
biological_process	GO:0019853	L-ascorbic acid biosynthetic process
biological_process	GO:0080005	photosystem stoichiometry adjustment
biological_process	GO:0045040	protein import into mitochondrial outer membrane
biological_process	GO:0048193	Golgi vesicle transport
biological_process	GO:0009850	auxin metabolic process
biological_process	GO:0042545	cell wall modification
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0048519	negative regulation of biological process
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0010050	vegetative phase change
biological_process	GO:0048438	floral whorl development
biological_process	GO:0010582	floral meristem determinacy
biological_process	GO:0009616	virus induced gene silencing
biological_process	GO:0009855	determination of bilateral symmetry
biological_process	GO:0048439	flower morphogenesis
biological_process	GO:0030244	cellulose biosynthetic process
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0009887	animal organ morphogenesis
biological_process	GO:0010158	abaxial cell fate specification
biological_process	GO:0009664	plant-type cell wall organization
biological_process	GO:0006508	proteolysis
biological_process	GO:0080167	response to karrikin
biological_process	GO:0010051	xylem and phloem pattern formation
cellular_component	GO:0031410	cytoplasmic vesicle
cellular_component	GO:0019013	viral nucleocapsid
cellular_component	GO:0016020	membrane
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0005681	spliceosomal complex
cellular_component	GO:0010287	plastoglobule
cellular_component	GO:0009505	plant-type cell wall
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0005787	signal peptidase complex
cellular_component	GO:0033179	proton-transporting V-type ATPase, V0 domain
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005622	intracellular
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0008287	protein serine/threonine phosphatase complex
cellular_component	GO:0009579	thylakoid
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005795	Golgi stack
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005618	cell wall
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0022626	cytosolic ribosome
cellular_component	GO:0005744	mitochondrial inner membrane presequence translocase complex
cellular_component	GO:0005742	mitochondrial outer membrane translocase complex
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0004853	uroporphyrinogen decarboxylase activity
molecular_function	GO:0016758	transferase activity, transferring hexosyl groups
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0015078	proton transmembrane transporter activity
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0051082	unfolded protein binding
molecular_function	GO:0004616	phosphogluconate dehydrogenase (decarboxylating) activity
molecular_function	GO:0004535	poly(A)-specific ribonuclease activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004722	protein serine/threonine phosphatase activity
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0015450	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0050661	NADP binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0031072	heat shock protein binding
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0004615	phosphomannomutase activity
molecular_function	GO:0003924	GTPase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo09803	0.77	Barchart \| Table
Spo27102	0.76	Barchart \| Table
Spo13956	0.75	Barchart \| Table
Spo05341	0.75	Barchart \| Table
Spo09674	0.74	Barchart \| Table
Spo01243	0.74	Barchart \| Table
Spo13107	0.73	Barchart \| Table
Spo05990	0.73	Barchart \| Table
Spo02480	0.73	Barchart \| Table
Spo04868	0.73	Barchart \| Table
Spo01437	0.73	Barchart \| Table
Spo20770	0.72	Barchart \| Table
Spo02085	0.72	Barchart \| Table
Spo07619	0.72	Barchart \| Table
Spo17887	0.72	Barchart \| Table
Spo21691	0.71	Barchart \| Table
Spo14008	0.71	Barchart \| Table
Spo23710	0.71	Barchart \| Table
Spo03195	0.71	Barchart \| Table
Spo09604	0.71	Barchart \| Table
Spo27374	0.71	Barchart \| Table
Spo11951	0.71	Barchart \| Table
Spo19898	0.70	Barchart \| Table
Spo25918	0.70	Barchart \| Table
Spo25330	0.70	Barchart \| Table
Spo01261	0.70	Barchart \| Table
Spo01507	0.70	Barchart \| Table
Spo02449	0.70	Barchart \| Table
Spo02747	0.70	Barchart \| Table
Spo23588	0.70	Barchart \| Table
Spo00812	0.70	Barchart \| Table
Spo22955	0.70	Barchart \| Table
Spo14980	0.70	Barchart \| Table
Spo14096	0.70	Barchart \| Table
Spo11911	0.70	Barchart \| Table
Spo25104	0.69	Barchart \| Table
Spo08997	0.69	Barchart \| Table
Spo25230	0.69	Barchart \| Table
Spo15149	0.69	Barchart \| Table
Spo15087	0.69	Barchart \| Table
Spo08999	0.69	Barchart \| Table
Spo10107	0.69	Barchart \| Table
Spo26986	0.69	Barchart \| Table
Spo09764	0.69	Barchart \| Table
Spo10473	0.69	Barchart \| Table
Spo09267	0.69	Barchart \| Table
Spo22583	0.69	Barchart \| Table
Spo00854	0.69	Barchart \| Table
Spo23123	0.69	Barchart \| Table
Spo09605	0.68	Barchart \| Table
Spo00080	0.68	Barchart \| Table
Spo00579	0.68	Barchart \| Table
Spo00615	0.68	Barchart \| Table
Spo02272	0.68	Barchart \| Table
Spo03251	0.68	Barchart \| Table
Spo04702	0.68	Barchart \| Table
Spo05731	0.68	Barchart \| Table
Spo08970	0.68	Barchart \| Table
Spo00079	0.68	Barchart \| Table
Spo11317	0.68	Barchart \| Table
Spo11431	0.68	Barchart \| Table
Spo12058	0.68	Barchart \| Table
Spo12107	0.68	Barchart \| Table
Spo12234	0.68	Barchart \| Table
Spo13490	0.68	Barchart \| Table
Spo15603	0.68	Barchart \| Table
Spo16339	0.68	Barchart \| Table
Spo16797	0.68	Barchart \| Table
Spo17778	0.68	Barchart \| Table
Spo18103	0.68	Barchart \| Table
Spo19558	0.68	Barchart \| Table
Spo20071	0.68	Barchart \| Table
Spo22760	0.68	Barchart \| Table
Spo23652	0.68	Barchart \| Table
Spo24590	0.68	Barchart \| Table
Spo24857	0.68	Barchart \| Table
Spo26925	0.68	Barchart \| Table
Spo27081	0.68	Barchart \| Table
Spo08197	0.67	Barchart \| Table
Spo14661	0.67	Barchart \| Table
Spo14687	0.67	Barchart \| Table
Spo06681	0.67	Barchart \| Table
Spo06670	0.67	Barchart \| Table
Spo17386	0.67	Barchart \| Table
Spo25659	0.67	Barchart \| Table
Spo19206	0.67	Barchart \| Table
Spo25851	0.67	Barchart \| Table
Spo06146	0.67	Barchart \| Table
Spo06053	0.67	Barchart \| Table
Spo22201	0.67	Barchart \| Table
Spo22970	0.67	Barchart \| Table
Spo03867	0.67	Barchart \| Table
Spo09993	0.67	Barchart \| Table
Spo00283	0.67	Barchart \| Table
Spo24594	0.67	Barchart \| Table
Spo12749	0.67	Barchart \| Table
Spo13441	0.67	Barchart \| Table
Spo24625	0.67	Barchart \| Table
Spo06594	0.66	Barchart \| Table
Spo08969	0.66	Barchart \| Table
Spo18775	0.66	Barchart \| Table
Spo08873	0.66	Barchart \| Table
Spo24066	0.66	Barchart \| Table
Spo19599	0.66	Barchart \| Table
Spo05029	0.66	Barchart \| Table
Spo12394	0.66	Barchart \| Table
Spo13731	0.66	Barchart \| Table
Spo08799	0.66	Barchart \| Table
Spo09559	0.66	Barchart \| Table
Spo07184	0.66	Barchart \| Table
Spo10940	0.66	Barchart \| Table
Spo00898	0.66	Barchart \| Table
Spo15211	0.66	Barchart \| Table
Spo27082	0.66	Barchart \| Table
Spo02068	0.66	Barchart \| Table
Spo16786	0.66	Barchart \| Table
Spo01714	0.66	Barchart \| Table
Spo17110	0.66	Barchart \| Table
Spo17679	0.66	Barchart \| Table
Spo01204	0.66	Barchart \| Table
Spo00936	0.66	Barchart \| Table
Spo20696	0.66	Barchart \| Table
Spo21027	0.66	Barchart \| Table
Spo21040	0.66	Barchart \| Table
Spo08490	0.66	Barchart \| Table
Spo12253	0.66	Barchart \| Table
Spo05843	0.66	Barchart \| Table
Spo00397	0.66	Barchart \| Table
Spo06314	0.65	Barchart \| Table
Spo15084	0.65	Barchart \| Table
Spo23388	0.65	Barchart \| Table
Spo08516	0.65	Barchart \| Table
Spo20957	0.65	Barchart \| Table
Spo23527	0.65	Barchart \| Table
Spo23549	0.65	Barchart \| Table
Spo03306	0.65	Barchart \| Table
Spo22052	0.65	Barchart \| Table
Spo14194	0.65	Barchart \| Table
Spo22507	0.65	Barchart \| Table
Spo17371	0.65	Barchart \| Table
Spo22592	0.65	Barchart \| Table
Spo16804	0.65	Barchart \| Table
Spo14965	0.65	Barchart \| Table
Spo02513	0.65	Barchart \| Table