Spo04297 (gene) | SpinachBase

Overview


Name	Spo04297
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Transducin/WD40 repeat-like superfamily protein
Location	SpoScf_01054 : 163596 .. 170009 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACGTTTAATTTTCCTCATAAAAACCTTATTTTTTTTTTTGGTGTACCACCTTTAGGGCTAATCCGGATTCGGATTCGGGGCGAGTTCTGAGTGGATAGGTTTCATTCCCCTTCCAATTGTTATTGTGGGGGATCGAACACGCGGTCCTTCCTACCAAGTTTAGCCTCAATGACCACTGAACCAACAGACAATTGGTATAAAAACCTTAATTATGATCCAGAACCAAAATTTATTGGGCCGAAATGTAAAATGGACTTGAAGTCCTACTTGCCCAAAGCAACAGTAGCCCAAATATTATTCAGGTCTCTCCCATGAAAAGTTAGAGAGAGAAACTACACGCTCTTCCCTTCAAGCAGAAGCAGAAGCAGAAGCAGAAGCTAGTAGCTACCCGATTATTCTCAGGCCAACTGCCGGCGAATCCTTCACTTTCCGGCGAGGTACTTTTCCTCTGTCCATCATTTCTATCTCGTCACTTTATTTCTCTTGAAATTTTGATTTTAATTGAAGCGTGAGTACGAAACTGTAACTGTTCGATTTTTGTGATTATGATTTGAATTTAAGGTGGTTTATGTTTTGATTTTGGTTGAAAATTTAGTAGGATGATGAAATTTGAGGTTAGAAAGAGAGAACTAGGGTTTATCGTTGTTACATGAGAGTTAATTGGAGGTTTAACTGGATAAATTATCAGTATCTGTTAACCCTAGGATTTGTAATAATTTGCAATTTGCGTCTCTAAAACAATGTTTGGTTTAGTTTAAATAGCTTGTGAGAATTATTGAAGACAAGGGTTGAAGTTGGTGAAGTAGGGTCACTCGAGGAAATGGGGTGAAATATTTCTAGGTAGAACTTTGAGTCAGGTTAGTGTGATTGGTGTTGGATAATCTGTAATTGTGGGCGAGAAATTTTGAAGTGTTGGCAGATGGGAAGAAGATTGATGTGAAGTTACAGCAGGGCATACCTACATTCTGATAGATAATCATAGATGTGTGCTGAAACATCATGCCCATTTTTCAATTTTCATGCGCTTTGTCCCTGAAGAAAAAACGGGGAAAATTTTGTGGTTTTATAGTTTGGACGACCTTCCGGCTGACAAAGTAAAGAGTTACCTAGTTTCATGTATGTATGGAAACTGGGTGCACTTTGAGGTTTTGGTAGAAATGTGGGTAAATGGAGGATATTCTTGCTAGAAGTTGAAGCTGCGTACTAATAGTTGGTAGAAAGGTGGGTATTGTTGATGTTGGATTGGCTATAATGGGAAAAAGATTGAGAAGAACGTGAACTTGACATACTTGGATAATGATATAGGCTTCGTATTAAATGCTATTCTTCATATTCAGTTTTTAGATTAACATGCTTAAGTATAGTTGCTGGCTGAGGATTTTAAGAACTGCAAAGGAAAAAGTTACAGGTATATAGTTTGCCGAACTAATTTTTGTTAGTACACAATTGTAGAAATGACCTTCAGGATTTCTCCCTTCTTTTCACATGAAAATTTTAAACTCTACTTTGCAAGTTTCATCTACTGGTTTCTGGCCATGGGTGGTTTTATGTAATACTTCAATTTATTCCTGGTAGGCAGAAAGTTTTAAATATCTAGTTAATGGTCTTTGGCAATATGTTTATATTACAAGGTTGCTCCGTGTGGTTTATAGAAGTCAAATGTCCAAATGTTAATTATGATCTTCCAGAATTTATGTAGGATATTATTTGCTGTTCATCCCTTCCTCTGCGATTCTTTCTTTACTTGAGTATCACAAGGAAATTAATTTGTTTCTGTAAACCGTTATTTTGATTTGCCACTTTGTTTGCTATTATAAAGTATGTCAATATGTGCAAGACGGTAGATATACTGCTTAGTATTAGTAAATCGGGAATTTCTTTGATCTCTGGTCTTGTGTCCAGGGCCTTTTATTTAGAATATTTAGATCCATGAAGTGCCTTTGTTATTTTACAGTGCATTGTGAATATTGCGGAAGCAGGTAAGATTTATGCAAATAATAGGACTTCAAAACCTTGAGAATATTGGTCTCTTCCTGTTTATTCGCGGTCATGTATGAACTTAAAACATTGTTGACTTATTGAGGTATTTTTTTATGGACCACTTGATCTATTAACGGGCTGTGATCCTATAATATTAGATTATTTTGTTCGATAAGAAAAAAAGATTATATTAACAATAAGGAAAAAAGAAGGAAAACAAACAAAGAGAACAAGCTGTATGCCTCAATTCCTTTGTACCCCCCCACCCCACTGAGTAATCTTGAAAGCTCCACTCTTAGCCTATAAGGATGCTAAATAGTGACTTTTCCCTACAAGAAGTCAGAAGCTAACAGTGTGGGAGATGTGATTTTCTGATGGATTGCAAAATGCTGAGATTGCTGACATCTTTGAGTATATTCTTTGGGGAAGCAATTGCTTCGGAAAAATAAGAGTTTTAAAAGTCAGCTGCCTTTCTTAATTTCTTTAGCTTTAAGATGGTGTAATATGGTTATGTGGTTGCGTGGCATGTTCTGTGTTAAAGACGACTGTTTTGGTTGTCTCTAAGATGTTAGTGGCTGTTGGGTTTGAAGGAATTGAGAATGGAAATGAACACCTTAATTCCCCTTTATCTCTGTTTGGTTGTGCAGTTTATGAATTTTCAGCTTCCGGTGTCCAAAACCCCAACCCCCTGAATCATGATTCCCTGTCCTAACGAATGAATCAAGTTACCCCTTCGTTGGTTTGTCAACAAAAATAAATCAAAAATCAGAGAAAGGGTCACCATTTTTACCAAATCCCCTTAAATCAGGCCACTGTGTGCATTATCAGGAACGCACATCAGACATTGTGGCTACCGGACGCAACTATCACCACCACCAAACACTGGTGCTAGATTCACCTTCGTGGCTTCAATGGTGTCAACAGAATTGGCCTTTTACCATTATCACTTGCATCGACAAACTAGTGCAGGAGCAGCAGGACCACTTCCACTACCATTGGAAAACACCAGGCCCAAACCTAGTATACTTCCACCATTCATTGACATAGTTAGCTGATTTGAAAGTACGAAATTGTCTACTGTGTCTCATTTTGTTACCTAGTTTGCTATATTAGGCAAAAAATGTACCATTTTCTTGTGATAATTCCCTTTTTCTGTTCGCGGGGGATTTAGGGGATTAGGTAACACTCCATTCTTCGCCTAATCTAGAATCAAGTTCCTTAAAAAAAAACTGTCTGGGCTTTTGTGAACCCAGCTACTAAAAGGCTACCAGCAGAGAAGGCGAGGGTGCAAAAAACTAGGCCTGAGCTAAAATTTTACTGGTAACCTGTTCCACTCAAGAAATTTGTGTGAATTTCAGCTCATAAATGGCTTAGATCTTAAATTTAGGGGCTGAAAATCTCCTAGGTGGCCCAATTACCACCAAGAATTTAGGTCCAGGCCCTTGTAAAATGTAAGGCAACAACAGATTATCAGCAGCAACATGTTGGTGCAACAGTAGCAGCTGCTGGGCCCAGGCTGGTTCCGTTTAGGGTGGTTTAAAAGTAGGCAAATAGCTGTATAGGTTGTTTAATGGAAGGTGCTGGGCTGTATGATTTGATCAGGTGCAGATGTTGAGGGAAGCAAAAAGAAAATATATGCAAGCTTCTCTAACTTTGTTTCTTTCATTGGGATGGAATGCAAAATGTTGGCATCTTGAGGATATTATTTGGTGAAGCAATTGCTTGTGCAAATTAAGATTTTTAAACGTCAAGCTGTCACTGTCAACTTCTTTAATGATTTTTAAGCTGGTATAATATGGTTCCATGTTATGTTCTGAGTTGAAGATGACTGCTTCGGTCATCTTGAAAATGTTGATGTTTGTTTGGTCTCAAGGAATCAAGTAGGGGAAAGGGATGACTGCTGTTTGATTGTCCATTGTTTCTTTCTCCACTTTCAAGTTTCCAAAAGTCCCAAACCCCTGAATCATGATTTACGATCCCTATTGGCCTATCCAAGGAATCGAGTTACCCATTTCCCTTTCCAAGGAATCCAGTATTCGAGTTGCCCCTTATTGGGTAATCAATAAAATTAAGTAAAAAAATCAGAAAAACGGTCACTTATTGGCAGGCAGGTAGAGTTTTGCGGACGGGAATAAGTATGATTTTGAAGTAGGCGGGTGTGGATAGAAAAAGTCATACCTGTCATGGGTAGCGGGTAGGTGGTGGATATGAGTCATATGACTTTAGCTGGGCGCAATGGGTAGCGGGCAAGGGTGGATTAAAGTCGTACCCACCATGGGTAGTAGGCGCAAATCGCAATAGTGTTTAGTCTGTTGAATAAAAAACGTTCATGTGTATTGCACAAGGTATTACTCATTACTTTTAATTGATCTGGCTGTTTGTATTTGACTATTTGTTTATGCACTCTATGTAAGACTTCTTATGATTTTGTGTAATAATACGAAATACTTCGAATGATTTAAAAATTAGGCTGACGGTTATTTTGAGGGTACACGGGGGTAATAGATATCCACATGGGTGGTGAAGCGGGGTTGGATATTGGCTTATACCCGCTTAGGCTGGTATGGATATTGAAATTGTTTTAGGTTTGTTGAATTGAGAGTAGGTTCAGTGATTTGAGTTGTGGGCAGATGTTGAGGGAAGCAGGTTTGAGGAGGAAATTAAAAATGGACGCAAGTGTGTAAATACACTTTCTTTTGTTTGAGAAACCAAACCTTAATAAAGGAAGTTGATTTTCAATCCCCACTATATCCAAACAAAAAAATAAAATAAAGTCTCATTATTTTATCATTTTCGTCCCTTTTCTGAGTCTGAACCATGCAGCCCTCCTTAGTTACATAGCTCTGCTAATTTGTCCTGTTACTTTTTTGATGAATTTTCCTACCAAGCTTGAAAACATTACACTTCCGTGAACTACACTTTCTTGTTTCTTTACATCTGGTTGTGTAGGTCATATTTCTTAATTTTCAGTACAGGTGCAGTCCCAAGTATTTCGGTATCAGTGAAGTGGAAGGCAAGATGCTGGCTACTACACATAACAATGAAAGTGCTTTATCCGTGGCTGGTCCTAGGCCAATGGAGTGGTCCACTATGCCGTATAATGCTCCTCAGGCCTCTGGGCCTAATGGGCGACAGCGTACATCAAGTTTGGAATCTCCAATCATGTTGTTGACCGGCCACCAAAGTGCAGTATATACCATGAAGTTTAATCCAGAAGGAACAGTAATTGCATCAGGTTCACATGATAGAGAAATCTTCTTGTGGAATGTGCATGGTGACTGCAAAAATTTCATGGTTTTGAAGGGTCACAAGAATGCAGTCCTTGATCTTCATTGGACCACTGATGGAACCCAGTTAGTTTCAGCAAGTCCTGATAAGACAGTTAGAGCATGGGATGCCGAAACAGGGAAACAGATTAAAAAGATGGCCGAGCATTCTTCATTTGTTAATTCATGCTGTCCTGCTCGGAGGGGCCCACCTCTTGTTGTTAGCGGGTCGGATGATGGAACTGCAAAGCTTTGGGATATGCGTCACAGGGGTGCCATTCAGACCTTTCCAGACAAATACCAAATAACTGCTGTAGCTTTTTCTGATGCATCAGATAAAATCTACACGGGTGGGATAGACAACGATGTTAAAGTGTGGGATATTCGCAAAAATGAAGTGACCATGACCCTCCAAGGCCACACGGATATGATCACCGGGATGTCTTTGAGTGCTGATGGATCTTATCTTCTCACCAATGGTATGGACTGTAAGCTCTGCGTATGGGATATGCGTCCCTATGCTCCTCAAAATCGTTGTGTGAAGGTTCTAGAAGGTCACCAGCATAACTTTGAAAAGACCTTGTTGAAATGTGCTTGGTCTCCTGATGGTAGCAAAGTCACTTCTGGAAGTGCAGACCGGATGGTTTATATATGGGATACAACTAGTCGTCGCATTTTGTACAAGCTTCCTGGTCATACTGGCTCTGTGAATGAATGTGTTTTTCACCCGAGAGAACCTATTGTTGGATCATGCAGTAGTGACAAACAGATCTACCTTGGGGAGCTGTAAACTGGTATTTCTTGCTTATACCAGCAAAATCAACATTAATGGTGCAACTGATTTCATCTTTCAGGTTCATTTATCCATGGTACTGACAGGACTAGTTGGGTCAATTTTACATAAGCAGGAAACTTGATGCTTGTGTAGAAAAATTATGTGATGCTTCAGATTAAGTTGAATTGGGAATCCTGCTGTTTTTTTTCCATATGTATGCAATGACTTGTGTAGTTTTTCACTGAGATAGTGAATAGGATGAGAAGCTTTTCACTGATTTTGGGTGCTACCAAGTACTCCGTACCAATGAAGAAAGTTTAGCAAAATTCCAACGTATTGAATTGTCATTGTTTATTTAGATTGAAATTGTGCACTCTTTATTTGCAATA

mRNA sequence

ATGAACAGAGAGAAACTACACGCTCTTCCCTTCAAGCAGAAGCAGAAGCAGAAGCAGAAGCTAGTAGCTACCCGATTATTCTCAGGCCAACTGCCGGCGAATCCTTCACTTTCCGGCGAGTACAGGTGCAGTCCCAAGTATTTCGGTATCAGTGAAGTGGAAGGCAAGATGCTGGCTACTACACATAACAATGAAAGTGCTTTATCCGTGGCTGGTCCTAGGCCAATGGAGTGGTCCACTATGCCGTATAATGCTCCTCAGGCCTCTGGGCCTAATGGGCGACAGCGTACATCAAGTTTGGAATCTCCAATCATGTTGTTGACCGGCCACCAAAGTGCAGTATATACCATGAAGTTTAATCCAGAAGGAACAGTAATTGCATCAGGTTCACATGATAGAGAAATCTTCTTGTGGAATGTGCATGGTGACTGCAAAAATTTCATGGTTTTGAAGGGTCACAAGAATGCAGTCCTTGATCTTCATTGGACCACTGATGGAACCCAGTTAGTTTCAGCAAGTCCTGATAAGACAGTTAGAGCATGGGATGCCGAAACAGGGAAACAGATTAAAAAGATGGCCGAGCATTCTTCATTTGTTAATTCATGCTGTCCTGCTCGGAGGGGCCCACCTCTTGTTGTTAGCGGGTCGGATGATGGAACTGCAAAGCTTTGGGATATGCGTCACAGGGGTGCCATTCAGACCTTTCCAGACAAATACCAAATAACTGCTGTAGCTTTTTCTGATGCATCAGATAAAATCTACACGGGTGGGATAGACAACGATGTTAAAGTGTGGGATATTCGCAAAAATGAAGTGACCATGACCCTCCAAGGCCACACGGATATGATCACCGGGATGTCTTTGAGTGCTGATGGATCTTATCTTCTCACCAATGGTATGGACTGTAAGCTCTGCGTATGGGATATGCGTCCCTATGCTCCTCAAAATCGTTGTGTGAAGGTTCTAGAAGGTCACCAGCATAACTTTGAAAAGACCTTGTTGAAATGTGCTTGGTCTCCTGATGGTAGCAAAGTCACTTCTGGAAGTGCAGACCGGATGGTTTATATATGGGATACAACTAGTCGTCGCATTTTGTACAAGCTTCCTGGTCATACTGGCTCTGTGAATGAATGTGTTTTTCACCCGAGAGAACCTATTGTTGGATCATGCAGTAGTGACAAACAGATCTACCTTGGGGAGCTGTAAACTGGTATTTCTTGCTTATACCAGCAAAATCAACATTAATGGTGCAACTGATTTCATCTTTCAGGTTCATTTATCCATGGTACTGACAGGACTAGTTGGGTCAATTTTACATAAGCAGGAAACTTGATGCTTGTGTAGAAAAATTATGTGATGCTTCAGATTAAGTTGAATTGGGAATCCTGCTGTTTTTTTTCCATATGTATGCAATGACTTGTGTAGTTTTTCACTGAGATAGTGAATAGGATGAGAAGCTTTTCACTGATTTTGGGTGCTACCAAGTACTCCGTACCAATGAAGAAAGTTTAGCAAAATTCCAACGTATTGAATTGTCATTGTTTATTTAGATTGAAATTGTGCACTCTTTATTTGCAATA

Coding sequence (CDS)

ATGAACAGAGAGAAACTACACGCTCTTCCCTTCAAGCAGAAGCAGAAGCAGAAGCAGAAGCTAGTAGCTACCCGATTATTCTCAGGCCAACTGCCGGCGAATCCTTCACTTTCCGGCGAGTACAGGTGCAGTCCCAAGTATTTCGGTATCAGTGAAGTGGAAGGCAAGATGCTGGCTACTACACATAACAATGAAAGTGCTTTATCCGTGGCTGGTCCTAGGCCAATGGAGTGGTCCACTATGCCGTATAATGCTCCTCAGGCCTCTGGGCCTAATGGGCGACAGCGTACATCAAGTTTGGAATCTCCAATCATGTTGTTGACCGGCCACCAAAGTGCAGTATATACCATGAAGTTTAATCCAGAAGGAACAGTAATTGCATCAGGTTCACATGATAGAGAAATCTTCTTGTGGAATGTGCATGGTGACTGCAAAAATTTCATGGTTTTGAAGGGTCACAAGAATGCAGTCCTTGATCTTCATTGGACCACTGATGGAACCCAGTTAGTTTCAGCAAGTCCTGATAAGACAGTTAGAGCATGGGATGCCGAAACAGGGAAACAGATTAAAAAGATGGCCGAGCATTCTTCATTTGTTAATTCATGCTGTCCTGCTCGGAGGGGCCCACCTCTTGTTGTTAGCGGGTCGGATGATGGAACTGCAAAGCTTTGGGATATGCGTCACAGGGGTGCCATTCAGACCTTTCCAGACAAATACCAAATAACTGCTGTAGCTTTTTCTGATGCATCAGATAAAATCTACACGGGTGGGATAGACAACGATGTTAAAGTGTGGGATATTCGCAAAAATGAAGTGACCATGACCCTCCAAGGCCACACGGATATGATCACCGGGATGTCTTTGAGTGCTGATGGATCTTATCTTCTCACCAATGGTATGGACTGTAAGCTCTGCGTATGGGATATGCGTCCCTATGCTCCTCAAAATCGTTGTGTGAAGGTTCTAGAAGGTCACCAGCATAACTTTGAAAAGACCTTGTTGAAATGTGCTTGGTCTCCTGATGGTAGCAAAGTCACTTCTGGAAGTGCAGACCGGATGGTTTATATATGGGATACAACTAGTCGTCGCATTTTGTACAAGCTTCCTGGTCATACTGGCTCTGTGAATGAATGTGTTTTTCACCCGAGAGAACCTATTGTTGGATCATGCAGTAGTGACAAACAGATCTACCTTGGGGAGCTGTAA

Protein sequence

MNREKLHALPFKQKQKQKQKLVATRLFSGQLPANPSLSGEYRCSPKYFGISEVEGKMLATTHNNESALSVAGPRPMEWSTMPYNAPQASGPNGRQRTSSLESPIMLLTGHQSAVYTMKFNPEGTVIASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQLVSASPDKTVRAWDAETGKQIKKMAEHSSFVNSCCPARRGPPLVVSGSDDGTAKLWDMRHRGAIQTFPDKYQITAVAFSDASDKIYTGGIDNDVKVWDIRKNEVTMTLQGHTDMITGMSLSADGSYLLTNGMDCKLCVWDMRPYAPQNRCVKVLEGHQHNFEKTLLKCAWSPDGSKVTSGSADRMVYIWDTTSRRILYKLPGHTGSVNECVFHPREPIVGSCSSDKQIYLGEL

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo04297.1	Spo04297.1	mRNA

Homology

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BLAST of Spo04297.1 vs. NCBI nr
Match: gi|902131560|gb|KNA04277.1| (hypothetical protein SOVF_201160 isoform B, partial [Spinacia oleracea])

HSP 1 Score: 818.9 bits (2114), Expect = 3.800e-234
Identity = 388/388 (100.00%), Postives = 388/388 (100.00%), Query Frame = 1


		  
Query: 14  KQKQKQKLVATRLFSGQLPANPSLSGEYRCSPKYFGISEVEGKMLATTHNNESALSVAGP 73
           KQKQKQKLVATRLFSGQLPANPSLSGEYRCSPKYFGISEVEGKMLATTHNNESALSVAGP
Sbjct: 1   KQKQKQKLVATRLFSGQLPANPSLSGEYRCSPKYFGISEVEGKMLATTHNNESALSVAGP 60

Query: 74  RPMEWSTMPYNAPQASGPNGRQRTSSLESPIMLLTGHQSAVYTMKFNPEGTVIASGSHDR 133
           RPMEWSTMPYNAPQASGPNGRQRTSSLESPIMLLTGHQSAVYTMKFNPEGTVIASGSHDR
Sbjct: 61  RPMEWSTMPYNAPQASGPNGRQRTSSLESPIMLLTGHQSAVYTMKFNPEGTVIASGSHDR 120

Query: 134 EIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQLVSASPDKTVRAWDAETGKQIKKMA 193
           EIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQLVSASPDKTVRAWDAETGKQIKKMA
Sbjct: 121 EIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQLVSASPDKTVRAWDAETGKQIKKMA 180

Query: 194 EHSSFVNSCCPARRGPPLVVSGSDDGTAKLWDMRHRGAIQTFPDKYQITAVAFSDASDKI 253
           EHSSFVNSCCPARRGPPLVVSGSDDGTAKLWDMRHRGAIQTFPDKYQITAVAFSDASDKI
Sbjct: 181 EHSSFVNSCCPARRGPPLVVSGSDDGTAKLWDMRHRGAIQTFPDKYQITAVAFSDASDKI 240

Query: 254 YTGGIDNDVKVWDIRKNEVTMTLQGHTDMITGMSLSADGSYLLTNGMDCKLCVWDMRPYA 313
           YTGGIDNDVKVWDIRKNEVTMTLQGHTDMITGMSLSADGSYLLTNGMDCKLCVWDMRPYA
Sbjct: 241 YTGGIDNDVKVWDIRKNEVTMTLQGHTDMITGMSLSADGSYLLTNGMDCKLCVWDMRPYA 300

Query: 314 PQNRCVKVLEGHQHNFEKTLLKCAWSPDGSKVTSGSADRMVYIWDTTSRRILYKLPGHTG 373
           PQNRCVKVLEGHQHNFEKTLLKCAWSPDGSKVTSGSADRMVYIWDTTSRRILYKLPGHTG
Sbjct: 301 PQNRCVKVLEGHQHNFEKTLLKCAWSPDGSKVTSGSADRMVYIWDTTSRRILYKLPGHTG 360

Query: 374 SVNECVFHPREPIVGSCSSDKQIYLGEL 402
           SVNECVFHPREPIVGSCSSDKQIYLGEL
Sbjct: 361 SVNECVFHPREPIVGSCSSDKQIYLGEL 388

[Close]

BLAST of Spo04297.1 vs. NCBI nr
Match: gi|902131559|gb|KNA04276.1| (hypothetical protein SOVF_201160 isoform A [Spinacia oleracea])

HSP 1 Score: 734.2 bits (1894), Expect = 1.200e-208
Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 1


		  
Query: 57  MLATTHNNESALSVAGPRPMEWSTMPYNAPQASGPNGRQRTSSLESPIMLLTGHQSAVYT 116
           MLATTHNNESALSVAGPRPMEWSTMPYNAPQASGPNGRQRTSSLESPIMLLTGHQSAVYT
Sbjct: 1   MLATTHNNESALSVAGPRPMEWSTMPYNAPQASGPNGRQRTSSLESPIMLLTGHQSAVYT 60

Query: 117 MKFNPEGTVIASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQLVSASPDK 176
           MKFNPEGTVIASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQLVSASPDK
Sbjct: 61  MKFNPEGTVIASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQLVSASPDK 120

Query: 177 TVRAWDAETGKQIKKMAEHSSFVNSCCPARRGPPLVVSGSDDGTAKLWDMRHRGAIQTFP 236
           TVRAWDAETGKQIKKMAEHSSFVNSCCPARRGPPLVVSGSDDGTAKLWDMRHRGAIQTFP
Sbjct: 121 TVRAWDAETGKQIKKMAEHSSFVNSCCPARRGPPLVVSGSDDGTAKLWDMRHRGAIQTFP 180

Query: 237 DKYQITAVAFSDASDKIYTGGIDNDVKVWDIRKNEVTMTLQGHTDMITGMSLSADGSYLL 296
           DKYQITAVAFSDASDKIYTGGIDNDVKVWDIRKNEVTMTLQGHTDMITGMSLSADGSYLL
Sbjct: 181 DKYQITAVAFSDASDKIYTGGIDNDVKVWDIRKNEVTMTLQGHTDMITGMSLSADGSYLL 240

Query: 297 TNGMDCKLCVWDMRPYAPQNRCVKVLEGHQHNFEKTLLKCAWSPDGSKVTSGSADRMVYI 356
           TNGMDCKLCVWDMRPYAPQNRCVKVLEGHQHNFEKTLLKCAWSPDGSKVTSGSADRMVYI
Sbjct: 241 TNGMDCKLCVWDMRPYAPQNRCVKVLEGHQHNFEKTLLKCAWSPDGSKVTSGSADRMVYI 300

Query: 357 WDTTSRRILYKLPGHTGSVNECVFHPREPIVGSCSSDKQIYLGEL 402
           WDTTSRRILYKLPGHTGSVNECVFHPREPIVGSCSSDKQIYLGEL
Sbjct: 301 WDTTSRRILYKLPGHTGSVNECVFHPREPIVGSCSSDKQIYLGEL 345

[Close]

BLAST of Spo04297.1 vs. NCBI nr
Match: gi|731364867|ref|XP_010694211.1| (PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 704.9 bits (1818), Expect = 8.000e-200
Identity = 326/346 (94.22%), Postives = 337/346 (97.40%), Query Frame = 1


		  
Query: 57  MLATTHNNESALSVAGPRP-MEWSTMPYNAPQASGPNGRQRTSSLESPIMLLTGHQSAVY 116
           MLAT +N+ESALSVAGPRP MEWSTMPYNAPQA GPNGRQRTSSLESPIMLL GHQSA+Y
Sbjct: 1   MLATFNNSESALSVAGPRPGMEWSTMPYNAPQAPGPNGRQRTSSLESPIMLLAGHQSAIY 60

Query: 117 TMKFNPEGTVIASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQLVSASPD 176
           TMKFNPEGTV+ASGSHDREIFLWNVHGDCKNF+VLKGHKNAVLDLHWTTDGTQ+VSASPD
Sbjct: 61  TMKFNPEGTVVASGSHDREIFLWNVHGDCKNFLVLKGHKNAVLDLHWTTDGTQIVSASPD 120

Query: 177 KTVRAWDAETGKQIKKMAEHSSFVNSCCPARRGPPLVVSGSDDGTAKLWDMRHRGAIQTF 236
           KTVRAWD ETGKQIKKMAEHSSFVNSCCPARRGPPL+VSGSDDGTAKLWDMRHRGAIQTF
Sbjct: 121 KTVRAWDVETGKQIKKMAEHSSFVNSCCPARRGPPLIVSGSDDGTAKLWDMRHRGAIQTF 180

Query: 237 PDKYQITAVAFSDASDKIYTGGIDNDVKVWDIRKNEVTMTLQGHTDMITGMSLSADGSYL 296
           PDKYQITAV FSDASDKIYTGGIDND+KVWD+RKNEVTMTLQGH DMITGMSLSADGSYL
Sbjct: 181 PDKYQITAVCFSDASDKIYTGGIDNDIKVWDVRKNEVTMTLQGHQDMITGMSLSADGSYL 240

Query: 297 LTNGMDCKLCVWDMRPYAPQNRCVKVLEGHQHNFEKTLLKCAWSPDGSKVTSGSADRMVY 356
           LTNGMDCKLC+WDMRPYAPQNRCVKVLEGHQHNFEK LLKC WSPDGSKVTSGSADRMVY
Sbjct: 241 LTNGMDCKLCIWDMRPYAPQNRCVKVLEGHQHNFEKNLLKCGWSPDGSKVTSGSADRMVY 300

Query: 357 IWDTTSRRILYKLPGHTGSVNECVFHPREPIVGSCSSDKQIYLGEL 402
           IWDTTSRRILYKLPGHTGSVNECVFHPREPI+GSCSSDKQIYLGEL
Sbjct: 301 IWDTTSRRILYKLPGHTGSVNECVFHPREPIIGSCSSDKQIYLGEL 346

[Close]

BLAST of Spo04297.1 vs. NCBI nr
Match: gi|734408286|gb|KHN34668.1| (U5 small nuclear ribonucleoprotein 40 kDa protein [Glycine soja])

HSP 1 Score: 666.8 bits (1719), Expect = 2.400e-188
Identity = 303/337 (89.91%), Postives = 320/337 (94.96%), Query Frame = 1


		  
Query: 65  ESALSVAGPRPMEWSTMPYNAPQASGPNGRQRTSSLESPIMLLTGHQSAVYTMKFNPEGT 124
           ESALSV GPRPMEWST+PYNAPQA GPNG+QRTSSLESPIMLL+GHQSA+YTMKFNP G+
Sbjct: 9   ESALSVVGPRPMEWSTVPYNAPQAPGPNGKQRTSSLESPIMLLSGHQSAIYTMKFNPAGS 68

Query: 125 VIASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQLVSASPDKTVRAWDAE 184
           VIASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQ+VSASPDKTVRAWD E
Sbjct: 69  VIASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQIVSASPDKTVRAWDVE 128

Query: 185 TGKQIKKMAEHSSFVNSCCPARRGPPLVVSGSDDGTAKLWDMRHRGAIQTFPDKYQITAV 244
           TGKQIKKM EH S+VNSCCP+RRGPPLVVSGSDDGTAKLWDMR RG+IQTFPDKYQITAV
Sbjct: 129 TGKQIKKMVEHLSYVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGSIQTFPDKYQITAV 188

Query: 245 AFSDASDKIYTGGIDNDVKVWDIRKNEVTMTLQGHTDMITGMSLSADGSYLLTNGMDCKL 304
            FSDASDKI+TGGIDNDVK+WD+RK EVTMTLQGH DMIT M LS DGSYLLTNGMDCKL
Sbjct: 189 GFSDASDKIFTGGIDNDVKIWDLRKGEVTMTLQGHQDMITAMQLSPDGSYLLTNGMDCKL 248

Query: 305 CVWDMRPYAPQNRCVKVLEGHQHNFEKTLLKCAWSPDGSKVTSGSADRMVYIWDTTSRRI 364
           C+WDMRPYAPQNRCVKVLEGHQHNFEK LLKC WSPDGSKVT+GS+DRMVYIWDTTSRRI
Sbjct: 249 CIWDMRPYAPQNRCVKVLEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRI 308

Query: 365 LYKLPGHTGSVNECVFHPREPIVGSCSSDKQIYLGEL 402
           LYKLPGH GSVNECVFHP EPI+GSCSSDKQIYLGE+
Sbjct: 309 LYKLPGHNGSVNECVFHPNEPIIGSCSSDKQIYLGEI 345

[Close]

BLAST of Spo04297.1 vs. NCBI nr
Match: gi|358248088|ref|NP_001239810.1| (uncharacterized protein LOC100789793 [Glycine max])

HSP 1 Score: 666.4 bits (1718), Expect = 3.200e-188
Identity = 303/337 (89.91%), Postives = 320/337 (94.96%), Query Frame = 1


		  
Query: 65  ESALSVAGPRPMEWSTMPYNAPQASGPNGRQRTSSLESPIMLLTGHQSAVYTMKFNPEGT 124
           ESALSV GPRPMEWST+PYNAPQA GPNG+QRTSSLESPIMLL+GHQSA+YTMKFNP G+
Sbjct: 9   ESALSVVGPRPMEWSTVPYNAPQAPGPNGKQRTSSLESPIMLLSGHQSAIYTMKFNPAGS 68

Query: 125 VIASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQLVSASPDKTVRAWDAE 184
           VIASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQ+VSASPDKTVRAWD E
Sbjct: 69  VIASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQIVSASPDKTVRAWDVE 128

Query: 185 TGKQIKKMAEHSSFVNSCCPARRGPPLVVSGSDDGTAKLWDMRHRGAIQTFPDKYQITAV 244
           TGKQIKKM EH S+VNSCCP+RRGPPLVVSGSDDGTAKLWDMR RG+IQTFPDKYQITAV
Sbjct: 129 TGKQIKKMVEHLSYVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGSIQTFPDKYQITAV 188

Query: 245 AFSDASDKIYTGGIDNDVKVWDIRKNEVTMTLQGHTDMITGMSLSADGSYLLTNGMDCKL 304
            FSDASDKI+TGGIDNDVK+WD+RK EVTMTLQGH DMIT M LS DGSYLLTNGMDCKL
Sbjct: 189 GFSDASDKIFTGGIDNDVKIWDLRKGEVTMTLQGHQDMITDMQLSPDGSYLLTNGMDCKL 248

Query: 305 CVWDMRPYAPQNRCVKVLEGHQHNFEKTLLKCAWSPDGSKVTSGSADRMVYIWDTTSRRI 364
           C+WDMRPYAPQNRCVKVLEGHQHNFEK LLKC WSPDGSKVT+GS+DRMVYIWDTTSRRI
Sbjct: 249 CIWDMRPYAPQNRCVKVLEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRI 308

Query: 365 LYKLPGHTGSVNECVFHPREPIVGSCSSDKQIYLGEL 402
           LYKLPGH GSVNECVFHP EPI+GSCSSDKQIYLGE+
Sbjct: 309 LYKLPGHNGSVNECVFHPNEPIIGSCSSDKQIYLGEI 345

[Close]

BLAST of Spo04297.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QAG7_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_201160 PE=4 SV=1)

HSP 1 Score: 818.9 bits (2114), Expect = 2.700e-234
Identity = 388/388 (100.00%), Postives = 388/388 (100.00%), Query Frame = 1


		  
Query: 14  KQKQKQKLVATRLFSGQLPANPSLSGEYRCSPKYFGISEVEGKMLATTHNNESALSVAGP 73
           KQKQKQKLVATRLFSGQLPANPSLSGEYRCSPKYFGISEVEGKMLATTHNNESALSVAGP
Sbjct: 1   KQKQKQKLVATRLFSGQLPANPSLSGEYRCSPKYFGISEVEGKMLATTHNNESALSVAGP 60

Query: 74  RPMEWSTMPYNAPQASGPNGRQRTSSLESPIMLLTGHQSAVYTMKFNPEGTVIASGSHDR 133
           RPMEWSTMPYNAPQASGPNGRQRTSSLESPIMLLTGHQSAVYTMKFNPEGTVIASGSHDR
Sbjct: 61  RPMEWSTMPYNAPQASGPNGRQRTSSLESPIMLLTGHQSAVYTMKFNPEGTVIASGSHDR 120

Query: 134 EIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQLVSASPDKTVRAWDAETGKQIKKMA 193
           EIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQLVSASPDKTVRAWDAETGKQIKKMA
Sbjct: 121 EIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQLVSASPDKTVRAWDAETGKQIKKMA 180

Query: 194 EHSSFVNSCCPARRGPPLVVSGSDDGTAKLWDMRHRGAIQTFPDKYQITAVAFSDASDKI 253
           EHSSFVNSCCPARRGPPLVVSGSDDGTAKLWDMRHRGAIQTFPDKYQITAVAFSDASDKI
Sbjct: 181 EHSSFVNSCCPARRGPPLVVSGSDDGTAKLWDMRHRGAIQTFPDKYQITAVAFSDASDKI 240

Query: 254 YTGGIDNDVKVWDIRKNEVTMTLQGHTDMITGMSLSADGSYLLTNGMDCKLCVWDMRPYA 313
           YTGGIDNDVKVWDIRKNEVTMTLQGHTDMITGMSLSADGSYLLTNGMDCKLCVWDMRPYA
Sbjct: 241 YTGGIDNDVKVWDIRKNEVTMTLQGHTDMITGMSLSADGSYLLTNGMDCKLCVWDMRPYA 300

Query: 314 PQNRCVKVLEGHQHNFEKTLLKCAWSPDGSKVTSGSADRMVYIWDTTSRRILYKLPGHTG 373
           PQNRCVKVLEGHQHNFEKTLLKCAWSPDGSKVTSGSADRMVYIWDTTSRRILYKLPGHTG
Sbjct: 301 PQNRCVKVLEGHQHNFEKTLLKCAWSPDGSKVTSGSADRMVYIWDTTSRRILYKLPGHTG 360

Query: 374 SVNECVFHPREPIVGSCSSDKQIYLGEL 402
           SVNECVFHPREPIVGSCSSDKQIYLGEL
Sbjct: 361 SVNECVFHPREPIVGSCSSDKQIYLGEL 388

[Close]

BLAST of Spo04297.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QCM4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_201160 PE=4 SV=1)

HSP 1 Score: 734.2 bits (1894), Expect = 8.600e-209
Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 1


		  
Query: 57  MLATTHNNESALSVAGPRPMEWSTMPYNAPQASGPNGRQRTSSLESPIMLLTGHQSAVYT 116
           MLATTHNNESALSVAGPRPMEWSTMPYNAPQASGPNGRQRTSSLESPIMLLTGHQSAVYT
Sbjct: 1   MLATTHNNESALSVAGPRPMEWSTMPYNAPQASGPNGRQRTSSLESPIMLLTGHQSAVYT 60

Query: 117 MKFNPEGTVIASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQLVSASPDK 176
           MKFNPEGTVIASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQLVSASPDK
Sbjct: 61  MKFNPEGTVIASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQLVSASPDK 120

Query: 177 TVRAWDAETGKQIKKMAEHSSFVNSCCPARRGPPLVVSGSDDGTAKLWDMRHRGAIQTFP 236
           TVRAWDAETGKQIKKMAEHSSFVNSCCPARRGPPLVVSGSDDGTAKLWDMRHRGAIQTFP
Sbjct: 121 TVRAWDAETGKQIKKMAEHSSFVNSCCPARRGPPLVVSGSDDGTAKLWDMRHRGAIQTFP 180

Query: 237 DKYQITAVAFSDASDKIYTGGIDNDVKVWDIRKNEVTMTLQGHTDMITGMSLSADGSYLL 296
           DKYQITAVAFSDASDKIYTGGIDNDVKVWDIRKNEVTMTLQGHTDMITGMSLSADGSYLL
Sbjct: 181 DKYQITAVAFSDASDKIYTGGIDNDVKVWDIRKNEVTMTLQGHTDMITGMSLSADGSYLL 240

Query: 297 TNGMDCKLCVWDMRPYAPQNRCVKVLEGHQHNFEKTLLKCAWSPDGSKVTSGSADRMVYI 356
           TNGMDCKLCVWDMRPYAPQNRCVKVLEGHQHNFEKTLLKCAWSPDGSKVTSGSADRMVYI
Sbjct: 241 TNGMDCKLCVWDMRPYAPQNRCVKVLEGHQHNFEKTLLKCAWSPDGSKVTSGSADRMVYI 300

Query: 357 WDTTSRRILYKLPGHTGSVNECVFHPREPIVGSCSSDKQIYLGEL 402
           WDTTSRRILYKLPGHTGSVNECVFHPREPIVGSCSSDKQIYLGEL
Sbjct: 301 WDTTSRRILYKLPGHTGSVNECVFHPREPIVGSCSSDKQIYLGEL 345

[Close]

BLAST of Spo04297.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BC44_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g091710 PE=4 SV=1)

HSP 1 Score: 704.9 bits (1818), Expect = 5.600e-200
Identity = 326/346 (94.22%), Postives = 337/346 (97.40%), Query Frame = 1


		  
Query: 57  MLATTHNNESALSVAGPRP-MEWSTMPYNAPQASGPNGRQRTSSLESPIMLLTGHQSAVY 116
           MLAT +N+ESALSVAGPRP MEWSTMPYNAPQA GPNGRQRTSSLESPIMLL GHQSA+Y
Sbjct: 1   MLATFNNSESALSVAGPRPGMEWSTMPYNAPQAPGPNGRQRTSSLESPIMLLAGHQSAIY 60

Query: 117 TMKFNPEGTVIASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQLVSASPD 176
           TMKFNPEGTV+ASGSHDREIFLWNVHGDCKNF+VLKGHKNAVLDLHWTTDGTQ+VSASPD
Sbjct: 61  TMKFNPEGTVVASGSHDREIFLWNVHGDCKNFLVLKGHKNAVLDLHWTTDGTQIVSASPD 120

Query: 177 KTVRAWDAETGKQIKKMAEHSSFVNSCCPARRGPPLVVSGSDDGTAKLWDMRHRGAIQTF 236
           KTVRAWD ETGKQIKKMAEHSSFVNSCCPARRGPPL+VSGSDDGTAKLWDMRHRGAIQTF
Sbjct: 121 KTVRAWDVETGKQIKKMAEHSSFVNSCCPARRGPPLIVSGSDDGTAKLWDMRHRGAIQTF 180

Query: 237 PDKYQITAVAFSDASDKIYTGGIDNDVKVWDIRKNEVTMTLQGHTDMITGMSLSADGSYL 296
           PDKYQITAV FSDASDKIYTGGIDND+KVWD+RKNEVTMTLQGH DMITGMSLSADGSYL
Sbjct: 181 PDKYQITAVCFSDASDKIYTGGIDNDIKVWDVRKNEVTMTLQGHQDMITGMSLSADGSYL 240

Query: 297 LTNGMDCKLCVWDMRPYAPQNRCVKVLEGHQHNFEKTLLKCAWSPDGSKVTSGSADRMVY 356
           LTNGMDCKLC+WDMRPYAPQNRCVKVLEGHQHNFEK LLKC WSPDGSKVTSGSADRMVY
Sbjct: 241 LTNGMDCKLCIWDMRPYAPQNRCVKVLEGHQHNFEKNLLKCGWSPDGSKVTSGSADRMVY 300

Query: 357 IWDTTSRRILYKLPGHTGSVNECVFHPREPIVGSCSSDKQIYLGEL 402
           IWDTTSRRILYKLPGHTGSVNECVFHPREPI+GSCSSDKQIYLGEL
Sbjct: 301 IWDTTSRRILYKLPGHTGSVNECVFHPREPIIGSCSSDKQIYLGEL 346

[Close]

BLAST of Spo04297.1 vs. UniProtKB/TrEMBL
Match: A0A0B2RQU6_GLYSO (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Glycine soja GN=glysoja_011221 PE=4 SV=1)

HSP 1 Score: 666.8 bits (1719), Expect = 1.700e-188
Identity = 303/337 (89.91%), Postives = 320/337 (94.96%), Query Frame = 1


		  
Query: 65  ESALSVAGPRPMEWSTMPYNAPQASGPNGRQRTSSLESPIMLLTGHQSAVYTMKFNPEGT 124
           ESALSV GPRPMEWST+PYNAPQA GPNG+QRTSSLESPIMLL+GHQSA+YTMKFNP G+
Sbjct: 9   ESALSVVGPRPMEWSTVPYNAPQAPGPNGKQRTSSLESPIMLLSGHQSAIYTMKFNPAGS 68

Query: 125 VIASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQLVSASPDKTVRAWDAE 184
           VIASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQ+VSASPDKTVRAWD E
Sbjct: 69  VIASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQIVSASPDKTVRAWDVE 128

Query: 185 TGKQIKKMAEHSSFVNSCCPARRGPPLVVSGSDDGTAKLWDMRHRGAIQTFPDKYQITAV 244
           TGKQIKKM EH S+VNSCCP+RRGPPLVVSGSDDGTAKLWDMR RG+IQTFPDKYQITAV
Sbjct: 129 TGKQIKKMVEHLSYVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGSIQTFPDKYQITAV 188

Query: 245 AFSDASDKIYTGGIDNDVKVWDIRKNEVTMTLQGHTDMITGMSLSADGSYLLTNGMDCKL 304
            FSDASDKI+TGGIDNDVK+WD+RK EVTMTLQGH DMIT M LS DGSYLLTNGMDCKL
Sbjct: 189 GFSDASDKIFTGGIDNDVKIWDLRKGEVTMTLQGHQDMITAMQLSPDGSYLLTNGMDCKL 248

Query: 305 CVWDMRPYAPQNRCVKVLEGHQHNFEKTLLKCAWSPDGSKVTSGSADRMVYIWDTTSRRI 364
           C+WDMRPYAPQNRCVKVLEGHQHNFEK LLKC WSPDGSKVT+GS+DRMVYIWDTTSRRI
Sbjct: 249 CIWDMRPYAPQNRCVKVLEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRI 308

Query: 365 LYKLPGHTGSVNECVFHPREPIVGSCSSDKQIYLGEL 402
           LYKLPGH GSVNECVFHP EPI+GSCSSDKQIYLGE+
Sbjct: 309 LYKLPGHNGSVNECVFHPNEPIIGSCSSDKQIYLGEI 345

[Close]

BLAST of Spo04297.1 vs. UniProtKB/TrEMBL
Match: I1N8B6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G114900 PE=4 SV=1)

HSP 1 Score: 666.4 bits (1718), Expect = 2.200e-188
Identity = 302/337 (89.61%), Postives = 320/337 (94.96%), Query Frame = 1


		  
Query: 65  ESALSVAGPRPMEWSTMPYNAPQASGPNGRQRTSSLESPIMLLTGHQSAVYTMKFNPEGT 124
           ESALSV GPRPMEWST+PYNAPQA GPNG+QRTSSLESPIMLL+GHQSA+YTMKFNP G+
Sbjct: 9   ESALSVVGPRPMEWSTVPYNAPQAPGPNGKQRTSSLESPIMLLSGHQSAIYTMKFNPAGS 68

Query: 125 VIASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQLVSASPDKTVRAWDAE 184
           V+ASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQ+VSASPDKTVRAWD E
Sbjct: 69  VVASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQIVSASPDKTVRAWDVE 128

Query: 185 TGKQIKKMAEHSSFVNSCCPARRGPPLVVSGSDDGTAKLWDMRHRGAIQTFPDKYQITAV 244
           TGKQIKKM EH S+VNSCCP+RRGPPLVVSGSDDGTAKLWDMR RG+IQTFPDKYQITAV
Sbjct: 129 TGKQIKKMVEHLSYVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGSIQTFPDKYQITAV 188

Query: 245 AFSDASDKIYTGGIDNDVKVWDIRKNEVTMTLQGHTDMITGMSLSADGSYLLTNGMDCKL 304
            FSDASDKI+TGGIDNDVK+WD+RK EVTMTLQGH DMIT M LS DGSYLLTNGMDCKL
Sbjct: 189 GFSDASDKIFTGGIDNDVKIWDLRKGEVTMTLQGHQDMITAMQLSPDGSYLLTNGMDCKL 248

Query: 305 CVWDMRPYAPQNRCVKVLEGHQHNFEKTLLKCAWSPDGSKVTSGSADRMVYIWDTTSRRI 364
           C+WDMRPYAPQNRCVKVLEGHQHNFEK LLKC WSPDGSKVT+GS+DRMVYIWDTTSRRI
Sbjct: 249 CIWDMRPYAPQNRCVKVLEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDTTSRRI 308

Query: 365 LYKLPGHTGSVNECVFHPREPIVGSCSSDKQIYLGEL 402
           LYKLPGH GSVNECVFHP EPI+GSCSSDKQIYLGE+
Sbjct: 309 LYKLPGHNGSVNECVFHPNEPIIGSCSSDKQIYLGEI 345

[Close]

BLAST of Spo04297.1 vs. ExPASy Swiss-Prot
Match: SNR40_MOUSE (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Mus musculus GN=Snrnp40 PE=1 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 5.000e-125
Identity = 195/325 (60.00%), Postives = 256/325 (78.77%), Query Frame = 1


		  
Query: 82  PYNAPQASGPN-----GRQRTSSLESPIMLLTGHQSAVYTMKFNPEGTVIASGSHDREIF 141
           P   PQ + P      G  R SSL++PIMLL+GH+  VY  KF+P G+ +AS   DR I 
Sbjct: 33  PGAGPQQATPGALLQAGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLIL 92

Query: 142 LWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQLVSASPDKTVRAWDAETGKQIKKMAEHS 201
           LWNV+GDC N+  LKGH  AV++LH+ TDG+ L SAS DKTV  WD+ETG+++K++  H+
Sbjct: 93  LWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHT 152

Query: 202 SFVNSCCPARRGPPLVVSGSDDGTAKLWDMRHRGAIQTFPDKYQITAVAFSDASDKIYTG 261
           SFVNSC PARRGP LV +GSDDGT KLWD+R + A+QTF + YQ+ AV F+D SD+I +G
Sbjct: 153 SFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISG 212

Query: 262 GIDNDVKVWDIRKNEVTMTLQGHTDMITGMSLSADGSYLLTNGMDCKLCVWDMRPYAPQN 321
           GIDND+KVWD+R+N++T T++GH D +TG+SLS++GSYLL+N MD  + VWD+RP+AP+ 
Sbjct: 213 GIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKE 272

Query: 322 RCVKVLEGHQHNFEKTLLKCAWSPDGSKVTSGSADRMVYIWDTTSRRILYKLPGHTGSVN 381
           RCVK+ +G+ HNFEK LL+C+WSPDGSK+ +GSADR VY+WDTTSRR+LYKLPGH GS+N
Sbjct: 273 RCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSIN 332

Query: 382 ECVFHPREPIVGSCSSDKQIYLGEL 402
           E  FHP EPI+ S SSDK++Y+GE+
Sbjct: 333 EVAFHPDEPIILSASSDKRLYMGEI 357

[Close]

BLAST of Spo04297.1 vs. ExPASy Swiss-Prot
Match: SNR40_HUMAN (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Homo sapiens GN=SNRNP40 PE=1 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 6.500e-125
Identity = 198/331 (59.82%), Postives = 258/331 (77.95%), Query Frame = 1


		  
Query: 71  AGPRPMEWSTMPYNAPQASGPNGRQRTSSLESPIMLLTGHQSAVYTMKFNPEGTVIASGS 130
           +GP   +    P    QA  P    R SSL++PIMLL+GH+  VY  KF+P G+ +AS  
Sbjct: 30  SGPGAGQQQATPGALLQAGPP----RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAG 89

Query: 131 HDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQLVSASPDKTVRAWDAETGKQIK 190
            DR I LWNV+GDC N+  LKGH  AV++LH+ TDG+ L SAS DKTV  WD+ETG+++K
Sbjct: 90  FDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVK 149

Query: 191 KMAEHSSFVNSCCPARRGPPLVVSGSDDGTAKLWDMRHRGAIQTFPDKYQITAVAFSDAS 250
           ++  H+SFVNSC PARRGP LV +GSDDGT KLWD+R + AIQTF + YQ+ AV F+D S
Sbjct: 150 RLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTS 209

Query: 251 DKIYTGGIDNDVKVWDIRKNEVTMTLQGHTDMITGMSLSADGSYLLTNGMDCKLCVWDMR 310
           D+I +GGIDND+KVWD+R+N++T T++GH D +TG+SLS++GSYLL+N MD  + VWD+R
Sbjct: 210 DQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 269

Query: 311 PYAPQNRCVKVLEGHQHNFEKTLLKCAWSPDGSKVTSGSADRMVYIWDTTSRRILYKLPG 370
           P+AP+ RCVK+ +G+ HNFEK LL+C+WSPDGSK+ +GSADR VY+WDTTSRRILYKLPG
Sbjct: 270 PFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPG 329

Query: 371 HTGSVNECVFHPREPIVGSCSSDKQIYLGEL 402
           H GS+NE  FHP EPI+ S SSDK++Y+GE+
Sbjct: 330 HAGSINEVAFHPDEPIIISASSDKRLYMGEI 356

[Close]

BLAST of Spo04297.1 vs. ExPASy Swiss-Prot
Match: SNR40_BOVIN (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Bos taurus GN=SNRNP40 PE=2 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 6.500e-125
Identity = 200/338 (59.17%), Postives = 261/338 (77.22%), Query Frame = 1


		  
Query: 64  NESALSVAGPRPMEWSTMPYNAPQASGPNGRQRTSSLESPIMLLTGHQSAVYTMKFNPEG 123
           +E  L  AG  P   +     AP A    G  R SSL++PIMLL+GH+  VY  KF+P G
Sbjct: 22  HELLLGAAGSGP--GAGQQQAAPGALLQAGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNG 81

Query: 124 TVIASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQLVSASPDKTVRAWDA 183
           + +AS   DR I LWNV+GDC N+  LKGH  AV++LH+ TDG+ L SAS DKTV  WD+
Sbjct: 82  STLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDS 141

Query: 184 ETGKQIKKMAEHSSFVNSCCPARRGPPLVVSGSDDGTAKLWDMRHRGAIQTFPDKYQITA 243
           ETG+++K++  H+SFVNSC PARRGP LV +GSDDGT KLWD+R + AIQTF + YQ+ A
Sbjct: 142 ETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLA 201

Query: 244 VAFSDASDKIYTGGIDNDVKVWDIRKNEVTMTLQGHTDMITGMSLSADGSYLLTNGMDCK 303
           V F+D SD+I +GGIDND+KVWD+R+N++T T++GH D +TG+SLS++GSYLL+N MD  
Sbjct: 202 VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNT 261

Query: 304 LCVWDMRPYAPQNRCVKVLEGHQHNFEKTLLKCAWSPDGSKVTSGSADRMVYIWDTTSRR 363
           + VWD+RP+AP+ RCV++ +G+ HNFEK LL+C+WSPDGSK+ +GSADR VY+WDTTSRR
Sbjct: 262 VRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRR 321

Query: 364 ILYKLPGHTGSVNECVFHPREPIVGSCSSDKQIYLGEL 402
           ILYKLPGH GS+NE  FHP EPI+ S SSDK++Y+GE+
Sbjct: 322 ILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357

[Close]

BLAST of Spo04297.1 vs. ExPASy Swiss-Prot
Match: SNR40_PONAB (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Pongo abelii GN=SNRNP40 PE=2 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 6.100e-123
Identity = 196/331 (59.21%), Postives = 257/331 (77.64%), Query Frame = 1


		  
Query: 71  AGPRPMEWSTMPYNAPQASGPNGRQRTSSLESPIMLLTGHQSAVYTMKFNPEGTVIASGS 130
           +GP   +    P    QA  P    R SSL++PIMLL+GH+  VY  KF+P G+ +AS  
Sbjct: 30  SGPGAGQQQATPGALLQAGPP----RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAG 89

Query: 131 HDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQLVSASPDKTVRAWDAETGKQIK 190
            DR I LWNV+GDC N+  LKG+  AV++LH+ TDG+ L SAS DKTV  WD+ETG+++K
Sbjct: 90  FDRLILLWNVYGDCGNYATLKGYSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVK 149

Query: 191 KMAEHSSFVNSCCPARRGPPLVVSGSDDGTAKLWDMRHRGAIQTFPDKYQITAVAFSDAS 250
           ++  H+SFVNSC PARRGP LV +GSDDGT KLWD+R + AIQTF + YQ+ AV F+D S
Sbjct: 150 RLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTS 209

Query: 251 DKIYTGGIDNDVKVWDIRKNEVTMTLQGHTDMITGMSLSADGSYLLTNGMDCKLCVWDMR 310
           D+I +GGIDND+KVWD+R+N++T T++GH D +TG+SLS++GSYLL+N MD  + VWD+R
Sbjct: 210 DQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 269

Query: 311 PYAPQNRCVKVLEGHQHNFEKTLLKCAWSPDGSKVTSGSADRMVYIWDTTSRRILYKLPG 370
           P+AP+ RCVK+ +G+ HNFEK LL+C+WSPDGSK+ +GSADR V +WDTTSRRILYKLPG
Sbjct: 270 PFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRSVCVWDTTSRRILYKLPG 329

Query: 371 HTGSVNECVFHPREPIVGSCSSDKQIYLGEL 402
           H GS+NE  FHP EPI+ S SSDK++Y+GE+
Sbjct: 330 HAGSINEVAFHPDEPIIISASSDKRLYMGEI 356

[Close]

BLAST of Spo04297.1 vs. ExPASy Swiss-Prot
Match: SNR40_DICDI (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Dictyostelium discoideum GN=snrnp40 PE=3 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 4.500e-110
Identity = 175/310 (56.45%), Postives = 229/310 (73.87%), Query Frame = 1


		  
Query: 93  GRQRTSSLESPIMLLTGHQSAVYTMKFNPEGTVIASGSHDREIFLWNVHGDCKNFMVLKG 152
           G +RTS LE PIM L GH+  +Y+ KFN  GT +ASG  D+EIFLWNV+G+C N+ VLKG
Sbjct: 44  GTERTSKLEHPIMQLIGHKGEIYSCKFNSYGTALASGGSDKEIFLWNVYGECINYSVLKG 103

Query: 153 HKNAVLDLHWTTDGTQLVSASPDKTVRAWDAETGKQIKKMAEHSSFVNSCCPARRGPPLV 212
           HK  +L+LHW+TD  ++ +A  DK++  WD+  G+ IK++ EHS  VNSCCPARRGPPLV
Sbjct: 104 HKGTILELHWSTDSNEIYTACTDKSIGVWDSNKGELIKRIREHSGVVNSCCPARRGPPLV 163

Query: 213 VSGSDDGTAKLWDMRHRGAIQTFPDKYQITAVAFSDASDKIYTGGIDNDVKVWDIRKNEV 272
            SGSDD +A+++D R +G+   F  KY +T+V FSDASD++ TGGIDN ++VWDIR  E 
Sbjct: 164 ASGSDDRSARIFDTRSKGSTHLFQHKYPVTSVCFSDASDQLITGGIDNVIRVWDIRNQED 223

Query: 273 TM-TLQGHTDMITGMSLSADGSYLLTNGMDCKLCVWDMRPYAPQNRCVKVLEGHQHNFEK 332
            + TL  H D IT  S+S DG+YLL+N MD    +WD+RPYAP NR +K   G Q+NFEK
Sbjct: 224 PLYTLASHQDTITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEK 283

Query: 333 TLLKCAWSPDGSKVTSGSADRMVYIWDTTSRRILYKLPGHTGSVNECVFHPREPIVGSCS 392
            L+K +WS DG ++  GS+DR VYIWDT ++++ Y LPGH+G+VNE  FHP EPI+ SCS
Sbjct: 284 NLIKSSWSIDGRRIGCGSSDRQVYIWDTNTKQLQYCLPGHSGTVNEVTFHPNEPIIASCS 343

Query: 393 SDKQIYLGEL 402
           SDK IYLGE+
Sbjct: 344 SDKTIYLGEI 353

[Close]

BLAST of Spo04297.1 vs. TAIR (Arabidopsis)
Match: AT2G43770.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 634.0 bits (1634), Expect = 6.100e-182
Identity = 286/341 (83.87%), Postives = 316/341 (92.67%), Query Frame = 1


		  
Query: 61  THNNESALSVAGPRPMEWSTMPYNAPQASGPNGRQRTSSLESPIMLLTGHQSAVYTMKFN 120
           +  NE+ALS  GPRPMEWST+P++A Q  GPNG+ RTSSLE+PIMLL+GH SAVYTMKFN
Sbjct: 5   SRENETALS--GPRPMEWSTVPHSASQGPGPNGKNRTSSLEAPIMLLSGHPSAVYTMKFN 64

Query: 121 PEGTVIASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQLVSASPDKTVRA 180
           P GT+IASGSHDREIFLW VHGDCKNFMVLKGHKNA+LDLHWT+DG+Q+VSASPDKTVRA
Sbjct: 65  PAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRA 124

Query: 181 WDAETGKQIKKMAEHSSFVNSCCPARRGPPLVVSGSDDGTAKLWDMRHRGAIQTFPDKYQ 240
           WD ETGKQIKKMAEHSSFVNSCCP RRGPPL++SGSDDGTAKLWDMR RGAIQTFPDKYQ
Sbjct: 125 WDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQ 184

Query: 241 ITAVAFSDASDKIYTGGIDNDVKVWDIRKNEVTMTLQGHTDMITGMSLSADGSYLLTNGM 300
           ITAV+FSDA+DKI+TGG+DNDVKVWD+RK E TMTL+GH D ITGMSLS DGSYLLTNGM
Sbjct: 185 ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGM 244

Query: 301 DCKLCVWDMRPYAPQNRCVKVLEGHQHNFEKTLLKCAWSPDGSKVTSGSADRMVYIWDTT 360
           D KLCVWDMRPYAPQNRCVK+ EGHQHNFEK LLKC+WSPDG+KVT+GS+DRMV+IWDTT
Sbjct: 245 DNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTT 304

Query: 361 SRRILYKLPGHTGSVNECVFHPREPIVGSCSSDKQIYLGEL 402
           SRR +YKLPGHTGSVNECVFHP EPI+GSCSSDK IYLGE+
Sbjct: 305 SRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNIYLGEI 343

[Close]

BLAST of Spo04297.1 vs. TAIR (Arabidopsis)
Match: AT3G49660.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 150.6 bits (379), Expect = 2.100e-36
Identity = 85/296 (28.72%), Postives = 148/296 (50.00%), Query Frame = 1


		  
Query: 107 LTGHQSAVYTMKFNPEGTVIASGSHDREIFLWNVHGD----CKNFMVLKGHKNAVLDLHW 166
           LT H  AV ++KF+ +G ++AS S D+ I  + ++       +      GH+N + D+ +
Sbjct: 20  LTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAF 79

Query: 167 TTDGTQLVSASPDKTVRAWDAETGKQIKKMAEHSSFVNSCCPARRGPPLVVSGSDDGTAK 226
           ++D   +VSAS DKT++ WD ETG  IK +  H+++   C        ++VSGS D T +
Sbjct: 80  SSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYA-FCVNFNPQSNMIVSGSFDETVR 139

Query: 227 LWDMRHRGAIQTFPDKYQ-ITAVAFSDASDKIYTGGIDNDVKVWDIRKNEVTMTL-QGHT 286
           +WD+     ++  P     +TAV F+     I +   D   ++WD        TL     
Sbjct: 140 IWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDEN 199

Query: 287 DMITGMSLSADGSYLLTNGMDCKLCVWDMRPYAPQNRCVKVLEGHQHNFEKTLLKCAWSP 346
             ++ +  S +G ++L   +D  L +W++       + +K   GH  N +  +       
Sbjct: 200 PPVSFVRFSPNGKFILVGTLDNTLRLWNIS----SAKFLKTYTGHV-NAQYCISSAFSVT 259

Query: 347 DGSKVTSGSADRMVYIWDTTSRRILYKLPGHTGSVNECVFHPREPIVGSCSSDKQI 397
           +G ++ SGS D  V++W+  S+++L KL GHT +V     HP E ++ S S DK +
Sbjct: 260 NGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTV 309

[Close]

BLAST of Spo04297.1 vs. TAIR (Arabidopsis)
Match: AT4G02730.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 134.8 bits (338), Expect = 1.200e-31
Identity = 88/299 (29.43%), Postives = 151/299 (50.50%), Query Frame = 1


		  
Query: 107 LTGHQSAVYTMKFNPEGTVIASGSHDREIFLWNVHGDCKNFMVL---KGHKNAVLDLHWT 166
           L GH +A+  +KF+ +G ++AS S D+ + LW+      N+ ++   +GH + + DL W+
Sbjct: 39  LEGHTAAISCVKFSNDGNLLASASVDKTMILWSA----TNYSLIHRYEGHSSGISDLAWS 98

Query: 167 TDGTQLVSASPDKTVRAWDAETGKQ-IKKMAEHSSFVNSCCPARRGPPLVVSGSDDGTAK 226
           +D     SAS D T+R WDA +  + +K +  H++FV  C        L+VSGS D T +
Sbjct: 99  SDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFV-FCVNFNPPSNLIVSGSFDETIR 158

Query: 227 LWDMRHRGAIQTF-PDKYQITAVAFSDASDKIYTGGIDNDVKVWDIRKNEVTMTL-QGHT 286
           +W+++    ++        I++V F+     I +   D   K+WD ++     TL    +
Sbjct: 159 IWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKS 218

Query: 287 DMITGMSLSADGSYLLTNGMDCKLCVWDMRPYAPQNRCVKVLEGHQHNFEKTLLKCAWS- 346
             ++    S +G ++L   +D  L    +  YA   + +KV  GH +  +   +  A+S 
Sbjct: 219 PAVSFAKFSPNGKFILVATLDSTL---KLSNYA-TGKFLKVYTGHTN--KVFCITSAFSV 278

Query: 347 PDGSKVTSGSADRMVYIWDTTSRRILYKLPGHTGSVNECVFHPREPIVGSCSS--DKQI 397
            +G  + SGS D  VY+WD  +R IL +L GHT +V     HP +  + S  +  DK I
Sbjct: 279 TNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTI 326

[Close]

BLAST of Spo04297.1 vs. TAIR (Arabidopsis)
Match: AT5G52820.1 (WD-40 repeat family protein / notchless protein, putative)

HSP 1 Score: 126.3 bits (316), Expect = 4.200e-29
Identity = 88/300 (29.33%), Postives = 140/300 (46.67%), Query Frame = 1


		  
Query: 107 LTGHQSAVYTMKFNPEGTVIASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDG 166
           + GH  AV  + F+P+G  +ASGS D  + LW+++ +   F   KGHKN VL + W+ DG
Sbjct: 105 IAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLF-TCKGHKNWVLTVAWSPDG 164

Query: 167 TQLVSASPDKTVRAWDAETGK-QIKKMAEHSSFVN--SCCPARRGPPL--VVSGSDDGTA 226
             LVS S    +  W+ + G+ +   +  H  ++   S  P     P    V+ S DG A
Sbjct: 165 KHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDA 224

Query: 227 KLWDMRHRGAIQTFPDKYQITAVAFSDASDKIYTGGIDNDVKVWDIRKNEVTMTLQGHTD 286
           ++WD+  + +I                    IYTG  D  +K+W+  + ++   L+GH  
Sbjct: 225 RIWDITLKKSIICLSGHTLAVTCVKWGGDGIIYTGSQDCTIKMWETTQGKLIRELKGHGH 284

Query: 287 MITGMSLSADGSYLLTNGMDCKLCVWDM--RPYAPQNRCVKVLEGHQHNFEKTLLKCAWS 346
            I  ++LS +  Y+L  G       +D   R Y P     K LE     + KT      S
Sbjct: 285 WINSLALSTE--YVLRTG------AFDHTGRQYPPNEEKQKALE----RYNKTK---GDS 344

Query: 347 PDGSKVTSGSADRMVYIWD-TTSRRILYKLPGHTGSVNECVFHPREPIVGSCSSDKQIYL 399
           P+  ++ SGS D  +++W+ + S++   +L GH   VN   F P    + S S DK + L
Sbjct: 345 PE--RLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRL 386

[Close]

BLAST of Spo04297.1 vs. TAIR (Arabidopsis)
Match: AT5G08560.1 (transducin family protein / WD-40 repeat family protein)

HSP 1 Score: 112.5 bits (280), Expect = 6.200e-25
Identity = 74/297 (24.92%), Postives = 143/297 (48.15%), Query Frame = 1


		  
Query: 106 LLTGHQSAVYTMKFNPEGTVIASGSHDREIFLWNVHGDCKNFM--VLKGHKNAVLDLHWT 165
           +L  H   V+ ++F+  G  +AS S D+   +W +  D    +   L GH   V+ + W+
Sbjct: 269 ILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWS 328

Query: 166 TDGTQLVSASPDKTVRAWDAETGKQIKKMAEHSSFVNSC--CPARRGPPLVVSGSDDGTA 225
            D  Q+++   ++ +R WD ++G  +    +      SC   P  +G   +++G  D + 
Sbjct: 329 PDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPISCGWYPDGQG---IIAGMTDRSI 388

Query: 226 KLWDMRHRGAIQTFPDKYQ-ITAVAFSDASDKIYTGGIDNDVKVWDIRKNEVTMTLQGHT 285
            +WD+  R        + Q ++ +A +D    + +   D+ + ++D R+  V   ++   
Sbjct: 389 CMWDLDGREKECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVISLFD-REATVERLIE-EE 448

Query: 286 DMITGMSLSADGSYLLTNGMDCKLCVWDMRPYAPQNRCVKVLEGHQHNFEKTLLKCAWSP 345
           DMIT  SLS D  Y+L N ++ ++ +W++       + V   +GH+ +    +  C    
Sbjct: 449 DMITSFSLSNDNKYILVNLLNQEIRLWNIEG---DPKIVSRYKGHKRS-RFIIRSCFGGY 508

Query: 346 DGSKVTSGSADRMVYIWDTTSRRILYKLPGHTGSVNECVFHPRE-PIVGSCSSDKQI 397
             + + SGS D  VYIW  ++ +++ +LPGH G+VN   + P    ++ S S D  I
Sbjct: 509 KQAFIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTI 556

The following BLAST results are available for this feature:

BLAST of Spo04297.1 vs. NCBI nr
BLAST of Spo04297.1 vs. UniProtKB/TrEMBL
BLAST of Spo04297.1 vs. ExPASy Swiss-Prot
BLAST of Spo04297.1 vs. TAIR (Arabidopsis)

BLAST of Spo04297.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902131560\|gb\|KNA04277.1\|	3.8e-234	100.	hypothetical protein SOVF_2011...	[more]
gi\|902131559\|gb\|KNA04276.1\|	1.2e-208	100.	hypothetical protein SOVF_2011...	[more]
gi\|731364867\|ref\|XP_010694211.1\|	8.0e-200	94.2	PREDICTED: U5 small nuclear ri...	[more]
gi\|734408286\|gb\|KHN34668.1\|	2.4e-188	89.9	U5 small nuclear ribonucleopro...	[more]
gi\|358248088\|ref\|NP_001239810.1\|	3.2e-188	89.9	uncharacterized protein LOC100...	[more]

BLAST of Spo04297.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QAG7_SPIOL	2.7e-234	100.	Uncharacterized protein (Fragm...	[more]
A0A0K9QCM4_SPIOL	8.6e-209	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BC44_BETVU	5.6e-200	94.2	Uncharacterized protein OS=Bet...	[more]
A0A0B2RQU6_GLYSO	1.7e-188	89.9	U5 small nuclear ribonucleopro...	[more]
I1N8B6_SOYBN	2.2e-188	89.6	Uncharacterized protein OS=Gly...	[more]

BLAST of Spo04297.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
SNR40_MOUSE	5.0e-125	60.0	U5 small nuclear ribonucleopro...	[more]
SNR40_HUMAN	6.5e-125	59.8	U5 small nuclear ribonucleopro...	[more]
SNR40_BOVIN	6.5e-125	59.1	U5 small nuclear ribonucleopro...	[more]
SNR40_PONAB	6.1e-123	59.2	U5 small nuclear ribonucleopro...	[more]
SNR40_DICDI	4.5e-110	56.4	U5 small nuclear ribonucleopro...	[more]

BLAST of Spo04297.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT2G43770.1	6.1e-182	83.8	Transducin/WD40 repeat-like su...	[more]
AT3G49660.1	2.1e-36	28.7	Transducin/WD40 repeat-like su...	[more]
AT4G02730.1	1.2e-31	29.4	Transducin/WD40 repeat-like su...	[more]
AT5G52820.1	4.2e-29	29.3	WD-40 repeat family protein / ...	[more]
AT5G08560.1	6.2e-25	24.9	transducin family protein / WD...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 273..308 score: 1.8E-4coord: 188..225 score: 0.0015coord: 103..139 score: 3.4E-6coord: 241..266 score: 0.0084coord: 145..182 score: 9.1E-5coord: 317..358 score: 5.
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 143..182 score: 1.1E-8coord: 361..400 score: 0.0046coord: 315..358 score: 7.8E-8coord: 228..266 score: 2.7E-4coord: 185..225 score: 3.1E-7coord: 100..139 score: 2.2E-8coord: 269..308 score: 1.
IPR001680	WD40 repeat	PROFILE	PS50082	WD_REPEATS_2	coord: 150..191 score: 16.423coord: 241..275 score: 12.113coord: 192..234 score: 10.041coord: 107..140 score: 15.588coord: 337..367 score: 11.377coord: 368..401 score: 8.604coord: 276..310 score: 12
IPR015943	WD40/YVTN repeat-like-containing domain	GENE3D	2.130.10.10		coord: 102..398 score: 1.4
IPR017986	WD40-repeat-containing domain	PROFILE	PS50294	WD_REPEATS_REGION	coord: 107..401 score: 56
IPR017986	WD40-repeat-containing domain	unknown	SSF50978	WD40 repeat-like	coord: 104..398 score: 3.14
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 169..183 score: -coord: 126..140 score: -coord: 212..226 score: -coord: 253..267 score: -coord: 345..359 scor
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 169..183 score: 7.5E-8coord: 212..226 score: 7.5E-8coord: 126..140 score: 7.
None	No IPR available	PANTHER	PTHR22847	WD40 REPEAT PROTEIN	coord: 102..401 score: 1.3E
None	No IPR available	PANTHER	PTHR22847:SF501	U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 40 KDA PROTEIN	coord: 102..401 score: 1.3E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050794	regulation of cellular process
biological_process	GO:0006470	protein dephosphorylation
biological_process	GO:0007049	cell cycle
biological_process	GO:0006342	chromatin silencing
biological_process	GO:0006261	DNA-dependent DNA replication
biological_process	GO:0032776	DNA methylation on cytosine
biological_process	GO:0031047	gene silencing by RNA
biological_process	GO:0034968	histone lysine methylation
biological_process	GO:0009791	post-embryonic development
biological_process	GO:0022414	reproductive process
biological_process	GO:0048608	reproductive structure development
biological_process	GO:0007010	cytoskeleton organization
biological_process	GO:0015994	chlorophyll metabolic process
biological_process	GO:0006075	(1->3)-beta-D-glucan biosynthetic process
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0006810	transport
biological_process	GO:0006424	glutamyl-tRNA aminoacylation
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0016579	protein deubiquitination
biological_process	GO:0048767	root hair elongation
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0048731	system development
biological_process	GO:0050896	response to stimulus
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0009987	cellular process
biological_process	GO:0010467	gene expression
biological_process	GO:0033036	macromolecule localization
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0071702	organic substance transport
biological_process	GO:0044238	primary metabolic process
biological_process	GO:0050793	regulation of developmental process
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0009165	nucleotide biosynthetic process
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0006090	pyruvate metabolic process
biological_process	GO:0007178	transmembrane receptor protein serine/threonine kinase signaling pathway
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0010498	proteasomal protein catabolic process
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0000186	activation of MAPKK activity
biological_process	GO:0007033	vacuole organization
biological_process	GO:0006425	glutaminyl-tRNA aminoacylation
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0009651	response to salt stress
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0007030	Golgi organization
biological_process	GO:0009585	red, far-red light phototransduction
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006816	calcium ion transport
biological_process	GO:0009097	isoleucine biosynthetic process
biological_process	GO:0009098	leucine biosynthetic process
biological_process	GO:0006450	regulation of translational fidelity
biological_process	GO:0009099	valine biosynthetic process
biological_process	GO:0006438	valyl-tRNA aminoacylation
biological_process	GO:2001295	malonyl-CoA biosynthetic process
cellular_component	GO:0019013	viral nucleocapsid
cellular_component	GO:0009705	plant-type vacuole membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0000148	1,3-beta-D-glucan synthase complex
cellular_component	GO:0005829	cytosol
cellular_component	GO:0009343	biotin carboxylase complex
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005643	nuclear pore
cellular_component	GO:0005634	nucleus
cellular_component	GO:1990904	ribonucleoprotein complex
cellular_component	GO:0000785	chromatin
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0009332	glutamate-tRNA ligase complex
cellular_component	GO:0080008	Cul4-RING E3 ubiquitin ligase complex
molecular_function	GO:0004818	glutamate-tRNA ligase activity
molecular_function	GO:0032440	2-alkenal reductase [NAD(P)] activity
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0004843	thiol-dependent ubiquitin-specific protease activity
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003989	acetyl-CoA carboxylase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004075	biotin carboxylase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004819	glutamine-tRNA ligase activity
molecular_function	GO:0020037	heme binding
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
molecular_function	GO:0008242	omega peptidase activity
molecular_function	GO:0002161	aminoacyl-tRNA editing activity
molecular_function	GO:0004832	valine-tRNA ligase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0003843	1,3-beta-D-glucan synthase activity
molecular_function	GO:0004721	phosphoprotein phosphatase activity
molecular_function	GO:0004709	MAP kinase kinase kinase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo06487	0.77	Barchart \| Table
Spo05849	0.77	Barchart \| Table
Spo14514	0.75	Barchart \| Table
Spo26194	0.74	Barchart \| Table
Spo07652	0.74	Barchart \| Table
Spo08905	0.73	Barchart \| Table
Spo18269	0.72	Barchart \| Table
Spo04219	0.72	Barchart \| Table
Spo04282	0.72	Barchart \| Table
Spo13179	0.71	Barchart \| Table
Spo23082	0.71	Barchart \| Table
Spo00606	0.71	Barchart \| Table
Spo00751	0.71	Barchart \| Table
Spo25181	0.71	Barchart \| Table
Spo03555	0.71	Barchart \| Table
Spo10736	0.71	Barchart \| Table
Spo05788	0.71	Barchart \| Table
Spo23892	0.70	Barchart \| Table
Spo07142	0.70	Barchart \| Table
Spo19401	0.70	Barchart \| Table
Spo06444	0.69	Barchart \| Table
Spo20956	0.69	Barchart \| Table
Spo18525	0.69	Barchart \| Table
Spo05126	0.69	Barchart \| Table
Spo16334	0.69	Barchart \| Table
Spo17310	0.69	Barchart \| Table
Spo09819	0.69	Barchart \| Table
Spo11015	0.69	Barchart \| Table
Spo24600	0.68	Barchart \| Table
Spo17638	0.68	Barchart \| Table
Spo15422	0.68	Barchart \| Table
Spo16871	0.68	Barchart \| Table
Spo25445	0.68	Barchart \| Table
Spo12394	0.68	Barchart \| Table
Spo15603	0.68	Barchart \| Table
Spo05663	0.68	Barchart \| Table
Spo07094	0.68	Barchart \| Table
Spo06897	0.68	Barchart \| Table
Spo00395	0.67	Barchart \| Table
Spo00689	0.67	Barchart \| Table
Spo00694	0.67	Barchart \| Table
Spo01375	0.67	Barchart \| Table
Spo02163	0.67	Barchart \| Table
Spo05455	0.67	Barchart \| Table
Spo05601	0.67	Barchart \| Table
Spo06743	0.67	Barchart \| Table
Spo10998	0.67	Barchart \| Table
Spo11095	0.67	Barchart \| Table
Spo11222	0.67	Barchart \| Table
Spo12195	0.67	Barchart \| Table
Spo14317	0.67	Barchart \| Table
Spo14849	0.67	Barchart \| Table
Spo14871	0.67	Barchart \| Table
Spo15134	0.67	Barchart \| Table
Spo15556	0.67	Barchart \| Table
Spo17547	0.67	Barchart \| Table
Spo18103	0.67	Barchart \| Table
Spo21196	0.67	Barchart \| Table
Spo21812	0.67	Barchart \| Table
Spo22860	0.67	Barchart \| Table
Spo25072	0.67	Barchart \| Table
Spo25497	0.67	Barchart \| Table
Spo25708	0.67	Barchart \| Table
Spo14781	0.66	Barchart \| Table
Spo17017	0.66	Barchart \| Table
Spo17654	0.66	Barchart \| Table
Spo24939	0.66	Barchart \| Table
Spo18465	0.66	Barchart \| Table
Spo18492	0.66	Barchart \| Table
Spo13856	0.66	Barchart \| Table
Spo13723	0.66	Barchart \| Table
Spo03902	0.66	Barchart \| Table
Spo22200	0.66	Barchart \| Table
Spo02672	0.66	Barchart \| Table
Spo23056	0.66	Barchart \| Table
Spo08540	0.66	Barchart \| Table
Spo23345	0.66	Barchart \| Table
Spo08451	0.66	Barchart \| Table
Spo24594	0.66	Barchart \| Table
Spo20917	0.65	Barchart \| Table
Spo22592	0.65	Barchart \| Table
Spo20957	0.65	Barchart \| Table
Spo00468	0.65	Barchart \| Table
Spo06522	0.65	Barchart \| Table
Spo16355	0.65	Barchart \| Table