Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTACACCAACGATTCCCATGACTCTGACCCACTTTCCCTGGGCTTAGCAGTGGTAGAGAGACTTAACAAAAGGCAAGAAGAAATAGGGCTTGAACTCCCTTACTTGCAAATTCAAGCAGGAACGCTTACCCACGGCATTGGTGAAACAGAAGTTGAGCTTCTCAGAGAGCTCAGGAGAGCATACCAAGGAACCTTCATGATCAGTGGAGGATTCAACAAAGAGCTGGGGATGAAGGCCATTGCTGAAGATGATGCTGATCTCGTTGCTTATGCCCGTTTTTTCCTCTCAAACCCTGATTTGGTTCGCCGGTTTGAGATCGACGCACCATTGAATGATTATGATGCTGCTACATTCTATACCCACGATCCTGTAGTTGGTTACAGTGATTACCCCTCCTTGGATGAAAATAGTGAAACCTGA ATGTACACCAACGATTCCCATGACTCTGACCCACTTTCCCTGGGCTTAGCAGTGGTAGAGAGACTTAACAAAAGGCAAGAAGAAATAGGGCTTGAACTCCCTTACTTGCAAATTCAAGCAGGAACGCTTACCCACGGCATTGGTGAAACAGAAGTTGAGCTTCTCAGAGAGCTCAGGAGAGCATACCAAGGAACCTTCATGATCAGTGGAGGATTCAACAAAGAGCTGGGGATGAAGGCCATTGCTGAAGATGATGCTGATCTCGTTGCTTATGCCCGTTTTTTCCTCTCAAACCCTGATTTGGTTCGCCGGTTTGAGATCGACGCACCATTGAATGATTATGATGCTGCTACATTCTATACCCACGATCCTGTAGTTGGTTACAGTGATTACCCCTCCTTGGATGAAAATAGTGAAACCTGA ATGTACACCAACGATTCCCATGACTCTGACCCACTTTCCCTGGGCTTAGCAGTGGTAGAGAGACTTAACAAAAGGCAAGAAGAAATAGGGCTTGAACTCCCTTACTTGCAAATTCAAGCAGGAACGCTTACCCACGGCATTGGTGAAACAGAAGTTGAGCTTCTCAGAGAGCTCAGGAGAGCATACCAAGGAACCTTCATGATCAGTGGAGGATTCAACAAAGAGCTGGGGATGAAGGCCATTGCTGAAGATGATGCTGATCTCGTTGCTTATGCCCGTTTTTTCCTCTCAAACCCTGATTTGGTTCGCCGGTTTGAGATCGACGCACCATTGAATGATTATGATGCTGCTACATTCTATACCCACGATCCTGTAGTTGGTTACAGTGATTACCCCTCCTTGGATGAAAATAGTGAAACCTGA MYTNDSHDSDPLSLGLAVVERLNKRQEEIGLELPYLQIQAGTLTHGIGETEVELLRELRRAYQGTFMISGGFNKELGMKAIAEDDADLVAYARFFLSNPDLVRRFEIDAPLNDYDAATFYTHDPVVGYSDYPSLDENSET Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo04307.1 vs. NCBI nr
Match: gi|902140180|gb|KNA04620.1| (hypothetical protein SOVF_197850 [Spinacia oleracea]) HSP 1 Score: 286.2 bits (731), Expect = 3.100e-74 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 1
BLAST of Spo04307.1 vs. NCBI nr
Match: gi|731338486|ref|XP_010680356.1| (PREDICTED: artemisinic aldehyde Delta(11(13)) reductase-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 237.7 bits (605), Expect = 1.300e-59 Identity = 112/135 (82.96%), Postives = 125/135 (92.59%), Query Frame = 1
BLAST of Spo04307.1 vs. NCBI nr
Match: gi|731338484|ref|XP_010680354.1| (PREDICTED: artemisinic aldehyde Delta(11(13)) reductase-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 233.4 bits (594), Expect = 2.400e-58 Identity = 114/140 (81.43%), Postives = 127/140 (90.71%), Query Frame = 1
BLAST of Spo04307.1 vs. NCBI nr
Match: gi|902140181|gb|KNA04621.1| (hypothetical protein SOVF_197860 [Spinacia oleracea]) HSP 1 Score: 223.4 bits (568), Expect = 2.500e-55 Identity = 108/139 (77.70%), Postives = 121/139 (87.05%), Query Frame = 1
BLAST of Spo04307.1 vs. NCBI nr
Match: gi|702304286|ref|XP_010049528.1| (PREDICTED: 12-oxophytodienoate reductase 3-like [Eucalyptus grandis]) HSP 1 Score: 171.0 bits (432), Expect = 1.500e-39 Identity = 89/145 (61.38%), Postives = 105/145 (72.41%), Query Frame = 1
BLAST of Spo04307.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QBJ7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_197850 PE=4 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 2.200e-74 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 1
BLAST of Spo04307.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C6V0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g133820 PE=4 SV=1) HSP 1 Score: 237.7 bits (605), Expect = 8.800e-60 Identity = 112/135 (82.96%), Postives = 125/135 (92.59%), Query Frame = 1
BLAST of Spo04307.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CBA4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g133830 PE=4 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 1.700e-58 Identity = 114/140 (81.43%), Postives = 127/140 (90.71%), Query Frame = 1
BLAST of Spo04307.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QDM9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_197860 PE=4 SV=1) HSP 1 Score: 223.4 bits (568), Expect = 1.700e-55 Identity = 108/139 (77.70%), Postives = 121/139 (87.05%), Query Frame = 1
BLAST of Spo04307.1 vs. UniProtKB/TrEMBL
Match: A0A059CVA1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C03542 PE=4 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 1.700e-39 Identity = 84/142 (59.15%), Postives = 105/142 (73.94%), Query Frame = 1
BLAST of Spo04307.1 vs. ExPASy Swiss-Prot
Match: DBR2_ARTAN (Artemisinic aldehyde Delta(11(13)) reductase OS=Artemisia annua GN=DBR2 PE=1 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 1.600e-38 Identity = 80/145 (55.17%), Postives = 104/145 (71.72%), Query Frame = 1
BLAST of Spo04307.1 vs. ExPASy Swiss-Prot
Match: OPR3_SOLLC (12-oxophytodienoate reductase 3 OS=Solanum lycopersicum GN=OPR3 PE=1 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 1.400e-37 Identity = 82/144 (56.94%), Postives = 101/144 (70.14%), Query Frame = 1
BLAST of Spo04307.1 vs. ExPASy Swiss-Prot
Match: OPR3_ARATH (12-oxophytodienoate reductase 3 OS=Arabidopsis thaliana GN=OPR3 PE=1 SV=2) HSP 1 Score: 154.5 bits (389), Expect = 8.800e-37 Identity = 79/139 (56.83%), Postives = 95/139 (68.35%), Query Frame = 1
BLAST of Spo04307.1 vs. ExPASy Swiss-Prot
Match: OPR7_ORYSJ (12-oxophytodienoate reductase 7 OS=Oryza sativa subsp. japonica GN=OPR7 PE=2 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 3.700e-35 Identity = 75/141 (53.19%), Postives = 94/141 (66.67%), Query Frame = 1
BLAST of Spo04307.1 vs. ExPASy Swiss-Prot
Match: OPR6_ORYSJ (Putative 12-oxophytodienoate reductase 6 OS=Oryza sativa subsp. japonica GN=OPR6 PE=2 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 4.000e-29 Identity = 67/137 (48.91%), Postives = 92/137 (67.15%), Query Frame = 1
BLAST of Spo04307.1 vs. TAIR (Arabidopsis)
Match: AT2G06050.2 (oxophytodienoate-reductase 3) HSP 1 Score: 154.5 bits (389), Expect = 5.000e-38 Identity = 79/139 (56.83%), Postives = 95/139 (68.35%), Query Frame = 1
BLAST of Spo04307.1 vs. TAIR (Arabidopsis)
Match: AT1G76690.1 (12-oxophytodienoate reductase 2) HSP 1 Score: 120.9 bits (302), Expect = 6.100e-28 Identity = 63/134 (47.01%), Postives = 91/134 (67.91%), Query Frame = 1
BLAST of Spo04307.1 vs. TAIR (Arabidopsis)
Match: AT1G76680.2 (12-oxophytodienoate reductase 1) HSP 1 Score: 120.6 bits (301), Expect = 8.000e-28 Identity = 62/134 (46.27%), Postives = 90/134 (67.16%), Query Frame = 1
BLAST of Spo04307.1 vs. TAIR (Arabidopsis)
Match: AT1G09400.1 (FMN-linked oxidoreductases superfamily protein) HSP 1 Score: 84.3 bits (207), Expect = 6.300e-17 Identity = 47/108 (43.52%), Postives = 70/108 (64.81%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo04307.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo04307.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo04307.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo04307.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 4
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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