Spo04324 (gene) | SpinachBase

Overview


Name	Spo04324
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	RING finger protein 126
Location	SpoScf_02760 : 41209 .. 44501 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATCAAATAGGTTTGCACATGGCTCACTCAACTCATTACTTTGACAATGAAACTCACAAAAACAGAAAGAAAACACAAAGAAAAAGAATCACTTTCTACATGCCCATAAATTATTCCTTTCCTATTTTTCTGTCCAATATGCAACATGTTATAAGTAGCCCCAAAATGTTACAACTTCCCAACTCAAACAACCATTATTAGCAAATGTCTTTAAGTCCTCCTCGAACTCGATCAAACCCGACCCGTATTTACGATTCTTATTGGTGCTACCAATGCCGACGGATTGTCCGACTCTCCTCGGACAACCCGTCGGAAATCGTATGTCCTCGATGTTTCGGTCAGTTTTTGAGTGAGATGGAAATCCCAAGACCAAGATTGATTTTGGATTTTACGTACGACGACCCGTCCCCTCAAGCCCGTCTTCTCGAAGCCTTGGCCCTCATGCTTGACCCGCCTATGAGGGTACGTAACCATGAACCCGACACCCCTTGGACGGTCTCACGACAACGGTCTAGTAATAGGGATGTTGTGCTCGAAGGGCCTACTACAGAACGACCGAGATGGGTTCGGGTCCCACAGGTTTCGAACAGGACGAGGGATGACTGGGATGTTGAACCCGGGTTACGTCCCCGACCTAGGTGGATCGTCGTAAGGCCCACGGGCTTCCAGCCACAAGGGGGGGCCGCAGTAAGCCAAGTCGGTAGGCCCCCCCAAATGGAGTCCGATCCAAGGAACTATTTCCTTGGACCGGGCTTACAACAACTTATCAACGACCTTACAGAGAACGACCGCCAGGGCCCGCCACCGGCACCGGACACCGCCATCGAAGCCGTCCCACTCGTGAAGCTCACGGCGGAGCACGTGGCCGAGGGGGGCTCGGAGTGTCCCGTTTGTAAGGAGGAGTTTGAAGTAGGAAGTGAAGTAAGAGAACTACCATGCAAACATGTGTATCATTCTGATTGCATTGTACCTTGGTTAAGGTTGCACAACTCGTGCCCGGTTTGTCGAACCGAGCTACCGGTTAGCTCGGTTCGACAATGTGAAGGTGTAGGAGGAGTTATCGAATCGGAAGGGTCGAGTATTGAAGATGGTAGGCCTCGAAGGTGCTTTAATTGGAACCGGTTGAGCTCAATTTGGCCATTTCGTTCGAGGTATTCAAGGATTAGTCCCCATGATGTTCGTAATACTAGGATGTCAACAGGAGGTTAGACCTTTAATCTTCGAATTAATAAGCGTTAATAGACCTATCAAACGGGCCGCATGGCGGGTTGATTCGGGTGGGTGACTTTCAGGTTTACAAATATTTGTTCCAGACTAGAACTTTCGGGTATGGTCCACCCAACGGGTTACGTCAATTTGGGTAATAATATATAAAGAATATGCGCATAAATTAACAAATTTTCATTTACATAAGTTTTTATTTAGTCACATTTAACCATAAAATGGCGTATATTTCAAATCAATATCATATTACACCTAACAATAGTAAAAATTAAATAACGTATTTATTGTCTTAAAATTCCTCATAATCTCATGTAATACTCTAAATACAACGATTTTCAATTGGTCGGGTAAAAAAAGAGTTCCTTCGGATTTTGATCCATTAGTTATTGGATTGTTCGGATAAAATCGGGTTCAGGTGATACCCAGTATGTTCAGGCCGGTTTTGGGTCGAGTTTCAGTTTTGGGTCGAGTTTCAGTTTTGGATCGATTTTTGATAGGTCTAAGCGTTACATATGTTATTTTCTTATTATGCTAGTGTAGATGATTGATTCATTCATTATTTAAGAACTTAATCAAATTTGGTTTAATTTGTATAACTGAATGTTTTAAATATTTGAAAATACAGCGTTTTTGTTGACATGCACGTTATGCCTGATGCTTGTGATACCCTTAGTCACATATTCTCCAATTCCATCCTAATAAGTCTAACAACAAGTAAGGAGATCCATCTCTTTTGCATTAGTTTTCATGTCATGCTTCCCAAATTTCTGTACTTTTACAAATGATTTTGAAAACTATTTTATTTAAGTAATAGATTCAGAATACCTATCTTACATTTTATACTTCATTTTTTGACCATTAATATGCTCTGATCTTGGTTAACCAATGATCGATTTTGAAAACTGTTTTATTAAGTCAGGATGTCAGAAGTATTACAAAAGTTTGTAATACTTCTGGCATCCTTAGTCCTTATTACTGTAATAATTCACAGAATCGCGCATCCTGGGCAATCCTGGGATTAGGGTATATGTTATTTTGGACTAGAGTATCTGTTTTGGGTCTATTTTTTGGGGGTTTTCTGCATCTGTCAAGAGAGTATTGTCTGTCTATATAAACTGTTAAGGTCATAACCTAGTAATATTATGTAATATATATGTGTGTTCTTTATTTACGTTCTTTATTTACATTCTTAATTGTCTTTCTTGCTTTCATTACAATATCTACCGTACTTTAATTATGCTACTATATCTACCTGCTTTTAGCTGAACGATCACGGAGGCAGTCCTAGATATCTATTATTTTGAACTAGGGTTATCTGTTTTGGGCCTATTTTCTGGGTTTTTCCAGATCTGCCTAGAGAATATTATATGTCTATATAGACTGTTAGGTCATAACCTAGTTGTATTTTTTATTTTTTTTATTTTTTTATTTATGTTCTTAACTGTCTTTCTTGCTTCCGTTATAACATTTACATACTGTACTTAATAATGGTACTATATCTACCTGGTTTCAGCTGAACGATCAAGGAGGCAATCCTGCAGTATTCTTTAGCATTGATGTTGGTTGTTGTCATTTATTGGTGCTCTGTGATATACTGTTATAACGGATGCAAGAAAGACAGTAAAGAACGTAACTAAAGAACACAAAGATGTAATTAACGTGGTTCACTAACAACATGTTAGCTACTTCCACGTGTAGAGAAGGTGAAGACTTTATTGATCTTGAGGAATACTTATTACATAATACAACTAGGTTAATTATGACCGATTCAAGGCATATTCTATTTCTAACATATACTTACATTTCTCGAATTTGATAGTGGAAATTTCCACTTCCTAACCCATGTTGTATATCGAATGCTTTCGAGTTCAAGTATTCAATGATTATGAGGATTAACCTTTTCAATTCTTTGTTACGCATATGCCTGAATCTATACTAGTTATACTGGTTGCATGTCGGTCAGTTCGTGCCTTTGGGTCGGGCTTTGGGTCGATGGCCTAAACGGGTCTAACCCACACCAAGCACACTTGTATTATGTCAGGCCGAAAATTTCGGAATATAGCCCAG

mRNA sequence

CAAATCAAATAGGTTTGCACATGGCTCACTCAACTCATTACTTTGACAATGAAACTCACAAAAACAGAAAGAAAACACAAAGAAAAAGAATCACTTTCTACATGCCCATAAATTATTCCTTTCCTATTTTTCTGTCCAATATGCAACATGTTATAAGTAGCCCCAAAATGTTACAACTTCCCAACTCAAACAACCATTATTAGCAAATGTCTTTAAGTCCTCCTCGAACTCGATCAAACCCGACCCGTATTTACGATTCTTATTGGTGCTACCAATGCCGACGGATTGTCCGACTCTCCTCGGACAACCCGTCGGAAATCGTATGTCCTCGATGTTTCGGTCAGTTTTTGAGTGAGATGGAAATCCCAAGACCAAGATTGATTTTGGATTTTACGTACGACGACCCGTCCCCTCAAGCCCGTCTTCTCGAAGCCTTGGCCCTCATGCTTGACCCGCCTATGAGGGTACGTAACCATGAACCCGACACCCCTTGGACGGTCTCACGACAACGGTCTAGTAATAGGGATGTTGTGCTCGAAGGGCCTACTACAGAACGACCGAGATGGGTTCGGGTCCCACAGGTTTCGAACAGGACGAGGGATGACTGGGATGTTGAACCCGGGTTACGTCCCCGACCTAGGTGGATCGTCGTAAGGCCCACGGGCTTCCAGCCACAAGGGGGGGCCGCAGTAAGCCAAGTCGGTAGGCCCCCCCAAATGGAGTCCGATCCAAGGAACTATTTCCTTGGACCGGGCTTACAACAACTTATCAACGACCTTACAGAGAACGACCGCCAGGGCCCGCCACCGGCACCGGACACCGCCATCGAAGCCGTCCCACTCGTGAAGCTCACGGCGGAGCACGTGGCCGAGGGGGGCTCGGAGTGTCCCGTTTGTAAGGAGGAGTTTGAAGTAGGAAGTGAAGTAAGAGAACTACCATGCAAACATGTGTATCATTCTGATTGCATTGTACCTTGGTTAAGGTTGCACAACTCGTGCCCGGTTTGTCGAACCGAGCTACCGGTTAGCTCGGTTCGACAATGTGAAGGTGTAGGAGGAGTTATCGAATCGGAAGGGTCGAGTATTGAAGATGGTAGGCCTCGAAGGTGCTTTAATTGGAACCGGTTGAGCTCAATTTGGCCATTTCGTTCGAGGTATTCAAGGATTAGTCCCCATGATGTTCGTAATACTAGGATGTCAACAGGAGCGTTTTTGTTGACATGCACGTTATGCCTGATGCTTGTGATACCCTTAGTCACATATTCTCCAATTCCATCCTAATAAGTCTAACAACAACTGAACGATCAAGGAGGCAATCCTGCAGTATTCTTTAGCATTGATGTTGGTTGTTGTCATTTATTGGTGCTCTGTGATATACTGTTATAACGGATGCAAGAAAGACAGTAAAGAACGTAACTAAAGAACACAAAGATGTAATTAACGTGGTTCACTAACAACATGTTAGCTACTTCCACGTGTAGAGAAGGTGAAGACTTTATTGATCTTGAGGAATACTTATTACATAATACAACTAGGTTAATTATGACCGATTCAAGGCATATTCTATTTCTAACATATACTTACATTTCTCGAATTTGATAGTGGAAATTTCCACTTCCTAACCCATGTTGTATATCGAATGCTTTCGAGTTCAAGTATTCAATGATTATGAGGATTAACCTTTTCAATTCTTTGTTACGCATATGCCTGAATCTATACTAGTTATACTGGTTGCATGTCGGTCAGTTCGTGCCTTTGGGTCGGGCTTTGGGTCGATGGCCTAAACGGGTCTAACCCACACCAAGCACACTTGTATTATGTCAGGCCGAAAATTTCGGAATATAGCCCAG

Coding sequence (CDS)

ATGTCTTTAAGTCCTCCTCGAACTCGATCAAACCCGACCCGTATTTACGATTCTTATTGGTGCTACCAATGCCGACGGATTGTCCGACTCTCCTCGGACAACCCGTCGGAAATCGTATGTCCTCGATGTTTCGGTCAGTTTTTGAGTGAGATGGAAATCCCAAGACCAAGATTGATTTTGGATTTTACGTACGACGACCCGTCCCCTCAAGCCCGTCTTCTCGAAGCCTTGGCCCTCATGCTTGACCCGCCTATGAGGGTACGTAACCATGAACCCGACACCCCTTGGACGGTCTCACGACAACGGTCTAGTAATAGGGATGTTGTGCTCGAAGGGCCTACTACAGAACGACCGAGATGGGTTCGGGTCCCACAGGTTTCGAACAGGACGAGGGATGACTGGGATGTTGAACCCGGGTTACGTCCCCGACCTAGGTGGATCGTCGTAAGGCCCACGGGCTTCCAGCCACAAGGGGGGGCCGCAGTAAGCCAAGTCGGTAGGCCCCCCCAAATGGAGTCCGATCCAAGGAACTATTTCCTTGGACCGGGCTTACAACAACTTATCAACGACCTTACAGAGAACGACCGCCAGGGCCCGCCACCGGCACCGGACACCGCCATCGAAGCCGTCCCACTCGTGAAGCTCACGGCGGAGCACGTGGCCGAGGGGGGCTCGGAGTGTCCCGTTTGTAAGGAGGAGTTTGAAGTAGGAAGTGAAGTAAGAGAACTACCATGCAAACATGTGTATCATTCTGATTGCATTGTACCTTGGTTAAGGTTGCACAACTCGTGCCCGGTTTGTCGAACCGAGCTACCGGTTAGCTCGGTTCGACAATGTGAAGGTGTAGGAGGAGTTATCGAATCGGAAGGGTCGAGTATTGAAGATGGTAGGCCTCGAAGGTGCTTTAATTGGAACCGGTTGAGCTCAATTTGGCCATTTCGTTCGAGGTATTCAAGGATTAGTCCCCATGATGTTCGTAATACTAGGATGTCAACAGGAGCGTTTTTGTTGACATGCACGTTATGCCTGATGCTTGTGATACCCTTAGTCACATATTCTCCAATTCCATCCTAA

Protein sequence

MSLSPPRTRSNPTRIYDSYWCYQCRRIVRLSSDNPSEIVCPRCFGQFLSEMEIPRPRLILDFTYDDPSPQARLLEALALMLDPPMRVRNHEPDTPWTVSRQRSSNRDVVLEGPTTERPRWVRVPQVSNRTRDDWDVEPGLRPRPRWIVVRPTGFQPQGGAAVSQVGRPPQMESDPRNYFLGPGLQQLINDLTENDRQGPPPAPDTAIEAVPLVKLTAEHVAEGGSECPVCKEEFEVGSEVRELPCKHVYHSDCIVPWLRLHNSCPVCRTELPVSSVRQCEGVGGVIESEGSSIEDGRPRRCFNWNRLSSIWPFRSRYSRISPHDVRNTRMSTGAFLLTCTLCLMLVIPLVTYSPIPS

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo04324.1	Spo04324.1	mRNA

Homology

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BLAST of Spo04324.1 vs. NCBI nr
Match: gi|902179008|gb|KNA09271.1| (hypothetical protein SOVF_155210 [Spinacia oleracea])

HSP 1 Score: 754.2 bits (1946), Expect = 1.000e-214
Identity = 357/357 (100.00%), Postives = 357/357 (100.00%), Query Frame = 1


		  
Query: 1   MSLSPPRTRSNPTRIYDSYWCYQCRRIVRLSSDNPSEIVCPRCFGQFLSEMEIPRPRLIL 60
           MSLSPPRTRSNPTRIYDSYWCYQCRRIVRLSSDNPSEIVCPRCFGQFLSEMEIPRPRLIL
Sbjct: 1   MSLSPPRTRSNPTRIYDSYWCYQCRRIVRLSSDNPSEIVCPRCFGQFLSEMEIPRPRLIL 60

Query: 61  DFTYDDPSPQARLLEALALMLDPPMRVRNHEPDTPWTVSRQRSSNRDVVLEGPTTERPRW 120
           DFTYDDPSPQARLLEALALMLDPPMRVRNHEPDTPWTVSRQRSSNRDVVLEGPTTERPRW
Sbjct: 61  DFTYDDPSPQARLLEALALMLDPPMRVRNHEPDTPWTVSRQRSSNRDVVLEGPTTERPRW 120

Query: 121 VRVPQVSNRTRDDWDVEPGLRPRPRWIVVRPTGFQPQGGAAVSQVGRPPQMESDPRNYFL 180
           VRVPQVSNRTRDDWDVEPGLRPRPRWIVVRPTGFQPQGGAAVSQVGRPPQMESDPRNYFL
Sbjct: 121 VRVPQVSNRTRDDWDVEPGLRPRPRWIVVRPTGFQPQGGAAVSQVGRPPQMESDPRNYFL 180

Query: 181 GPGLQQLINDLTENDRQGPPPAPDTAIEAVPLVKLTAEHVAEGGSECPVCKEEFEVGSEV 240
           GPGLQQLINDLTENDRQGPPPAPDTAIEAVPLVKLTAEHVAEGGSECPVCKEEFEVGSEV
Sbjct: 181 GPGLQQLINDLTENDRQGPPPAPDTAIEAVPLVKLTAEHVAEGGSECPVCKEEFEVGSEV 240

Query: 241 RELPCKHVYHSDCIVPWLRLHNSCPVCRTELPVSSVRQCEGVGGVIESEGSSIEDGRPRR 300
           RELPCKHVYHSDCIVPWLRLHNSCPVCRTELPVSSVRQCEGVGGVIESEGSSIEDGRPRR
Sbjct: 241 RELPCKHVYHSDCIVPWLRLHNSCPVCRTELPVSSVRQCEGVGGVIESEGSSIEDGRPRR 300

Query: 301 CFNWNRLSSIWPFRSRYSRISPHDVRNTRMSTGAFLLTCTLCLMLVIPLVTYSPIPS 358
           CFNWNRLSSIWPFRSRYSRISPHDVRNTRMSTGAFLLTCTLCLMLVIPLVTYSPIPS
Sbjct: 301 CFNWNRLSSIWPFRSRYSRISPHDVRNTRMSTGAFLLTCTLCLMLVIPLVTYSPIPS 357

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BLAST of Spo04324.1 vs. NCBI nr
Match: gi|731375515|ref|XP_010667286.1| (PREDICTED: E3 ubiquitin-protein ligase RING1 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 548.1 bits (1411), Expect = 1.100e-152
Identity = 271/359 (75.49%), Postives = 303/359 (84.40%), Query Frame = 1


		  
Query: 1   MSLSPPRTRSNPTRIYDSYWCYQCRRIVRLSSDNPSEIVCPRCFGQFLSEMEIPRPRLIL 60
           MSLSPPRTRS+PTRIY+SYWCYQC RIVR+SSDN S+IVCPRCFGQF++EMEIPRPRL+L
Sbjct: 1   MSLSPPRTRSSPTRIYNSYWCYQCSRIVRISSDNTSDIVCPRCFGQFITEMEIPRPRLVL 60

Query: 61  DFTYDDPSPQARLLEALALMLDPPMRVRNHEPDTPWTVSRQRSSNRDVVLEGPTTERPRW 120
           +FTYDDPSPQARLLEALALMLDPPMR+R  E + PW+  R+RS + DVVLEGP + +PRW
Sbjct: 61  NFTYDDPSPQARLLEALALMLDPPMRIR--ESNEPWSFPRRRSRS-DVVLEGPNSGQPRW 120

Query: 121 VRVPQVSNRTRDDWDVEPGLRPRPR-WIVVRPTGFQPQGGAAVSQVGRPPQMESDPRNYF 180
           VRVP+ SN +RDD D E GL  RPR WI+ RP G QP   +  S+        +DPRNYF
Sbjct: 121 VRVPRHSN-SRDDIDNELGLHTRPRAWIIARPIGQQPGIASPSSRPEDGLTPGTDPRNYF 180

Query: 181 LGPGLQQLINDLTENDRQGPPPAPDTAIEAVPLVKLTAEHVAEGGSECPVCKEEFEVGSE 240
           LG GLQ+LIN+LTENDR GPPPAPDTAIEAVPLVKLTAEHVA+GGSECPVCKEEFE+G E
Sbjct: 181 LGSGLQELINELTENDRPGPPPAPDTAIEAVPLVKLTAEHVAQGGSECPVCKEEFEIGCE 240

Query: 241 VRELPCKHVYHSDCIVPWLRLHNSCPVCRTELPVSSVRQCEGVGGVIESEGSSIEDGRPR 300
           VRELPCKHVYHSDCIVPWLRLHNSCPVCRTELPV    QCE  G ++ESEGSSIEDGR R
Sbjct: 241 VRELPCKHVYHSDCIVPWLRLHNSCPVCRTELPVIH-DQCEDGGRIVESEGSSIEDGRTR 300

Query: 301 RCFNWNRLSSIWPFRSRYSRISPH----DVRNTRMSTGAFLLTCTLCLMLVIPLVTYSP 355
           RC NW+R SSIWPFRSRYSRI+PH    + +N RMSTGAFLLTCTLCLMLVIP +TYSP
Sbjct: 301 RCLNWSRFSSIWPFRSRYSRINPHGDHNNPQNPRMSTGAFLLTCTLCLMLVIPFMTYSP 354

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BLAST of Spo04324.1 vs. NCBI nr
Match: gi|731375517|ref|XP_010667287.1| (PREDICTED: E3 ubiquitin-protein ligase RING1 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 513.8 bits (1322), Expect = 2.300e-142
Identity = 253/339 (74.63%), Postives = 284/339 (83.78%), Query Frame = 1


		  
Query: 1   MSLSPPRTRSNPTRIYDSYWCYQCRRIVRLSSDNPSEIVCPRCFGQFLSEMEIPRPRLIL 60
           MSLSPPRTRS+PTRIY+SYWCYQC RIVR+SSDN S+IVCPRCFGQF++EMEIPRPRL+L
Sbjct: 1   MSLSPPRTRSSPTRIYNSYWCYQCSRIVRISSDNTSDIVCPRCFGQFITEMEIPRPRLVL 60

Query: 61  DFTYDDPSPQARLLEALALMLDPPMRVRNHEPDTPWTVSRQRSSNRDVVLEGPTTERPRW 120
           +FTYDDPSPQARLLEALALMLDPPMR+R  E + PW+  R+RS + DVVLEGP + +PRW
Sbjct: 61  NFTYDDPSPQARLLEALALMLDPPMRIR--ESNEPWSFPRRRSRS-DVVLEGPNSGQPRW 120

Query: 121 VRVPQVSNRTRDDWDVEPGLRPRPR-WIVVRPTGFQPQGGAAVSQVGRPPQMESDPRNYF 180
           VRVP+ SN +RDD D E GL  RPR WI+ RP G QP   +  S+        +DPRNYF
Sbjct: 121 VRVPRHSN-SRDDIDNELGLHTRPRAWIIARPIGQQPGIASPSSRPEDGLTPGTDPRNYF 180

Query: 181 LGPGLQQLINDLTENDRQGPPPAPDTAIEAVPLVKLTAEHVAEGGSECPVCKEEFEVGSE 240
           LG GLQ+LIN+LTENDR GPPPAPDTAIEAVPLVKLTAEHVA+GGSECPVCKEEFE+G E
Sbjct: 181 LGSGLQELINELTENDRPGPPPAPDTAIEAVPLVKLTAEHVAQGGSECPVCKEEFEIGCE 240

Query: 241 VRELPCKHVYHSDCIVPWLRLHNSCPVCRTELPVSSVRQCEGVGGVIESEGSSIEDGRPR 300
           VRELPCKHVYHSDCIVPWLRLHNSCPVCRTELPV    QCE  G ++ESEGSSIEDGR R
Sbjct: 241 VRELPCKHVYHSDCIVPWLRLHNSCPVCRTELPVIH-DQCEDGGRIVESEGSSIEDGRTR 300

Query: 301 RCFNWNRLSSIWPFRSRYSRISPH----DVRNTRMSTGA 335
           RC NW+R SSIWPFRSRYSRI+PH    + +N RMSTGA
Sbjct: 301 RCLNWSRFSSIWPFRSRYSRINPHGDHNNPQNPRMSTGA 334

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BLAST of Spo04324.1 vs. NCBI nr
Match: gi|224066851|ref|XP_002302246.1| (zinc finger family protein [Populus trichocarpa])

HSP 1 Score: 337.0 bits (863), Expect = 3.900e-89
Identity = 174/335 (51.94%), Postives = 221/335 (65.97%), Query Frame = 1


		  
Query: 1   MSLSPPRTRSNPTR-IYDSYWCYQCRRIVRLSSDNPSEIVCPRCFGQFLSEMEIPRPRLI 60
           MSLSPPRTR+N T   +  YWCYQC ++VR+++ +PSEI+CPRC GQFL E+ I RP L+
Sbjct: 1   MSLSPPRTRTNGTTGNFQPYWCYQCHQMVRIATTDPSEIICPRCSGQFLCEIGINRPILV 60

Query: 61  LDFTYDDPSPQARLLEALALMLDPPMRVRNHEPDTPWTVSRQRSSNRDVVLEGPTTERPR 120
           +DFT  DPSP+ARLLEAL+LMLDPP+R  N+  D P     +RS  R++ LE     R  
Sbjct: 61  VDFTAFDPSPEARLLEALSLMLDPPIRRFNYSLDEPEPEPPRRSWRRNLSLE--LDGRDN 120

Query: 121 WVRV-PQVSNRTRDDWDV--------EPGLRPRPR-WIVVRPTGFQPQGGAAVSQVGRPP 180
           W  + P++  R   DW +        EPG++ RPR WI  RP     +    +SQ   P 
Sbjct: 121 WDSLDPEIRPRRSRDWSLDGRGILEHEPGIQSRPRTWIQYRPRNPLGEPIEPLSQSENPV 180

Query: 181 QMESDPRNYFLGPGLQQLINDLTENDRQGPPPAPDTAIEAVPLVKLTAEHVAEGGSECPV 240
           +   DPR++F+G GL +LI  LT+NDRQGPPPAP+ AI+ +P VK+ A H+    S CPV
Sbjct: 181 RPLVDPRDFFVGSGLNELIEQLTQNDRQGPPPAPEIAIDTIPTVKIEASHLV-NDSHCPV 240

Query: 241 CKEEFEVGSEVRELPCKHVYHSDCIVPWLRLHNSCPVCRTELPVSSVRQCEGVGGVIESE 300
           C EEF+VG E RELPCKH+YHS+CIVPWLRLHNSCPVCR ELPV+S    +      + +
Sbjct: 241 CMEEFKVGGEARELPCKHIYHSECIVPWLRLHNSCPVCRKELPVNSESSAQ------DED 300

Query: 301 GSSIEDGRPRRCFNWNR-LSSIWPFRSRYSRISPH 324
                 GR  RC  W R LSS+WPFR+RY RISPH
Sbjct: 301 ECEDGGGRRGRCSRWRRQLSSLWPFRARYGRISPH 326

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BLAST of Spo04324.1 vs. NCBI nr
Match: gi|743845769|ref|XP_011027569.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform X2 [Populus euphratica])

HSP 1 Score: 327.0 bits (837), Expect = 4.100e-86
Identity = 179/370 (48.38%), Postives = 225/370 (60.81%), Query Frame = 1


		  
Query: 1   MSLSPPRTRSNPTRI-YDSYWCYQCRRIVRLSSDNPSEIVCPRCFGQFLSEMEIPRPRLI 60
           MSLSPPRTR+N T + +  YWCYQC ++VR+ + + SEI+CPRC GQFLSE+ I RPRL+
Sbjct: 1   MSLSPPRTRTNGTTVNFQRYWCYQCHQMVRIDTTDSSEIICPRCSGQFLSEIGINRPRLV 60

Query: 61  LDFTYDDPSPQARLLEALALMLDPPMRVRNHEPDTPWTVSRQ--RSSNRDVVLEGPTTER 120
           +DFT  DPSP ARLLEAL+LMLDPP+R  N+  D P    R   R  NR   ++  T  R
Sbjct: 61  VDFTAFDPSPDARLLEALSLMLDPPIRRFNYSLDEPEPPRRSWFRRRNRPDFID--TEIR 120

Query: 121 PRWVR---------------VPQVSNRTRDDWDVEP--------GLRPRPR-WIVVRPTG 180
           PR  R                P++S R   DW            G++ RPR W+  RP  
Sbjct: 121 PRRRRNLSLELDGRDTWDSFYPEISQRRSPDWSFSGTGLMEHVHGIQSRPRTWMQYRPGY 180

Query: 181 FQPQGGAAVSQVGRPPQMESDPRNYFLGPGLQQLINDLTENDRQGPPPAPDTAIEAVPLV 240
              +    +SQ   P     D R++FLGPGL +LI  LT+NDR GPPPAP+  I+A+P V
Sbjct: 181 PFREPIEPLSQSENPVPPLVDHRDFFLGPGLNELIEQLTQNDRPGPPPAPEITIDAIPTV 240

Query: 241 KLTAEHVAEGGSECPVCKEEFEVGSEVRELPCKHVYHSDCIVPWLRLHNSCPVCRTELPV 300
           K+ A H+    S CPVCKEEF+VG E RELPCKH+YHS+CIVPWLRLHNSCPVCR ELPV
Sbjct: 241 KIEASHLLND-SHCPVCKEEFKVGGEARELPCKHIYHSECIVPWLRLHNSCPVCRKELPV 300

Query: 301 SSVRQCEGVGGVIESEGSSIEDGRPRRCFNWNR-LSSIWPFRSRYSRISPH-DVRNTRMS 342
           +S    +      + +      GR  RC  W R LSS+WPFR+RY RISPH +V  T   
Sbjct: 301 NSESSAQ------DEDECEDGGGRRGRCLRWRRQLSSLWPFRARYGRISPHGEVAGTSQG 360

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BLAST of Spo04324.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QRX9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_155210 PE=4 SV=1)

HSP 1 Score: 754.2 bits (1946), Expect = 7.200e-215
Identity = 357/357 (100.00%), Postives = 357/357 (100.00%), Query Frame = 1


		  
Query: 1   MSLSPPRTRSNPTRIYDSYWCYQCRRIVRLSSDNPSEIVCPRCFGQFLSEMEIPRPRLIL 60
           MSLSPPRTRSNPTRIYDSYWCYQCRRIVRLSSDNPSEIVCPRCFGQFLSEMEIPRPRLIL
Sbjct: 1   MSLSPPRTRSNPTRIYDSYWCYQCRRIVRLSSDNPSEIVCPRCFGQFLSEMEIPRPRLIL 60

Query: 61  DFTYDDPSPQARLLEALALMLDPPMRVRNHEPDTPWTVSRQRSSNRDVVLEGPTTERPRW 120
           DFTYDDPSPQARLLEALALMLDPPMRVRNHEPDTPWTVSRQRSSNRDVVLEGPTTERPRW
Sbjct: 61  DFTYDDPSPQARLLEALALMLDPPMRVRNHEPDTPWTVSRQRSSNRDVVLEGPTTERPRW 120

Query: 121 VRVPQVSNRTRDDWDVEPGLRPRPRWIVVRPTGFQPQGGAAVSQVGRPPQMESDPRNYFL 180
           VRVPQVSNRTRDDWDVEPGLRPRPRWIVVRPTGFQPQGGAAVSQVGRPPQMESDPRNYFL
Sbjct: 121 VRVPQVSNRTRDDWDVEPGLRPRPRWIVVRPTGFQPQGGAAVSQVGRPPQMESDPRNYFL 180

Query: 181 GPGLQQLINDLTENDRQGPPPAPDTAIEAVPLVKLTAEHVAEGGSECPVCKEEFEVGSEV 240
           GPGLQQLINDLTENDRQGPPPAPDTAIEAVPLVKLTAEHVAEGGSECPVCKEEFEVGSEV
Sbjct: 181 GPGLQQLINDLTENDRQGPPPAPDTAIEAVPLVKLTAEHVAEGGSECPVCKEEFEVGSEV 240

Query: 241 RELPCKHVYHSDCIVPWLRLHNSCPVCRTELPVSSVRQCEGVGGVIESEGSSIEDGRPRR 300
           RELPCKHVYHSDCIVPWLRLHNSCPVCRTELPVSSVRQCEGVGGVIESEGSSIEDGRPRR
Sbjct: 241 RELPCKHVYHSDCIVPWLRLHNSCPVCRTELPVSSVRQCEGVGGVIESEGSSIEDGRPRR 300

Query: 301 CFNWNRLSSIWPFRSRYSRISPHDVRNTRMSTGAFLLTCTLCLMLVIPLVTYSPIPS 358
           CFNWNRLSSIWPFRSRYSRISPHDVRNTRMSTGAFLLTCTLCLMLVIPLVTYSPIPS
Sbjct: 301 CFNWNRLSSIWPFRSRYSRISPHDVRNTRMSTGAFLLTCTLCLMLVIPLVTYSPIPS 357

[Close]

BLAST of Spo04324.1 vs. UniProtKB/TrEMBL
Match: A0A0J8DXA5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_007800 PE=4 SV=1)

HSP 1 Score: 548.1 bits (1411), Expect = 7.800e-153
Identity = 271/359 (75.49%), Postives = 303/359 (84.40%), Query Frame = 1


		  
Query: 1   MSLSPPRTRSNPTRIYDSYWCYQCRRIVRLSSDNPSEIVCPRCFGQFLSEMEIPRPRLIL 60
           MSLSPPRTRS+PTRIY+SYWCYQC RIVR+SSDN S+IVCPRCFGQF++EMEIPRPRL+L
Sbjct: 1   MSLSPPRTRSSPTRIYNSYWCYQCSRIVRISSDNTSDIVCPRCFGQFITEMEIPRPRLVL 60

Query: 61  DFTYDDPSPQARLLEALALMLDPPMRVRNHEPDTPWTVSRQRSSNRDVVLEGPTTERPRW 120
           +FTYDDPSPQARLLEALALMLDPPMR+R  E + PW+  R+RS + DVVLEGP + +PRW
Sbjct: 61  NFTYDDPSPQARLLEALALMLDPPMRIR--ESNEPWSFPRRRSRS-DVVLEGPNSGQPRW 120

Query: 121 VRVPQVSNRTRDDWDVEPGLRPRPR-WIVVRPTGFQPQGGAAVSQVGRPPQMESDPRNYF 180
           VRVP+ SN +RDD D E GL  RPR WI+ RP G QP   +  S+        +DPRNYF
Sbjct: 121 VRVPRHSN-SRDDIDNELGLHTRPRAWIIARPIGQQPGIASPSSRPEDGLTPGTDPRNYF 180

Query: 181 LGPGLQQLINDLTENDRQGPPPAPDTAIEAVPLVKLTAEHVAEGGSECPVCKEEFEVGSE 240
           LG GLQ+LIN+LTENDR GPPPAPDTAIEAVPLVKLTAEHVA+GGSECPVCKEEFE+G E
Sbjct: 181 LGSGLQELINELTENDRPGPPPAPDTAIEAVPLVKLTAEHVAQGGSECPVCKEEFEIGCE 240

Query: 241 VRELPCKHVYHSDCIVPWLRLHNSCPVCRTELPVSSVRQCEGVGGVIESEGSSIEDGRPR 300
           VRELPCKHVYHSDCIVPWLRLHNSCPVCRTELPV    QCE  G ++ESEGSSIEDGR R
Sbjct: 241 VRELPCKHVYHSDCIVPWLRLHNSCPVCRTELPVIH-DQCEDGGRIVESEGSSIEDGRTR 300

Query: 301 RCFNWNRLSSIWPFRSRYSRISPH----DVRNTRMSTGAFLLTCTLCLMLVIPLVTYSP 355
           RC NW+R SSIWPFRSRYSRI+PH    + +N RMSTGAFLLTCTLCLMLVIP +TYSP
Sbjct: 301 RCLNWSRFSSIWPFRSRYSRINPHGDHNNPQNPRMSTGAFLLTCTLCLMLVIPFMTYSP 354

[Close]

BLAST of Spo04324.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B2Z5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_007800 PE=4 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 1.600e-142
Identity = 253/339 (74.63%), Postives = 284/339 (83.78%), Query Frame = 1


		  
Query: 1   MSLSPPRTRSNPTRIYDSYWCYQCRRIVRLSSDNPSEIVCPRCFGQFLSEMEIPRPRLIL 60
           MSLSPPRTRS+PTRIY+SYWCYQC RIVR+SSDN S+IVCPRCFGQF++EMEIPRPRL+L
Sbjct: 1   MSLSPPRTRSSPTRIYNSYWCYQCSRIVRISSDNTSDIVCPRCFGQFITEMEIPRPRLVL 60

Query: 61  DFTYDDPSPQARLLEALALMLDPPMRVRNHEPDTPWTVSRQRSSNRDVVLEGPTTERPRW 120
           +FTYDDPSPQARLLEALALMLDPPMR+R  E + PW+  R+RS + DVVLEGP + +PRW
Sbjct: 61  NFTYDDPSPQARLLEALALMLDPPMRIR--ESNEPWSFPRRRSRS-DVVLEGPNSGQPRW 120

Query: 121 VRVPQVSNRTRDDWDVEPGLRPRPR-WIVVRPTGFQPQGGAAVSQVGRPPQMESDPRNYF 180
           VRVP+ SN +RDD D E GL  RPR WI+ RP G QP   +  S+        +DPRNYF
Sbjct: 121 VRVPRHSN-SRDDIDNELGLHTRPRAWIIARPIGQQPGIASPSSRPEDGLTPGTDPRNYF 180

Query: 181 LGPGLQQLINDLTENDRQGPPPAPDTAIEAVPLVKLTAEHVAEGGSECPVCKEEFEVGSE 240
           LG GLQ+LIN+LTENDR GPPPAPDTAIEAVPLVKLTAEHVA+GGSECPVCKEEFE+G E
Sbjct: 181 LGSGLQELINELTENDRPGPPPAPDTAIEAVPLVKLTAEHVAQGGSECPVCKEEFEIGCE 240

Query: 241 VRELPCKHVYHSDCIVPWLRLHNSCPVCRTELPVSSVRQCEGVGGVIESEGSSIEDGRPR 300
           VRELPCKHVYHSDCIVPWLRLHNSCPVCRTELPV    QCE  G ++ESEGSSIEDGR R
Sbjct: 241 VRELPCKHVYHSDCIVPWLRLHNSCPVCRTELPVIH-DQCEDGGRIVESEGSSIEDGRTR 300

Query: 301 RCFNWNRLSSIWPFRSRYSRISPH----DVRNTRMSTGA 335
           RC NW+R SSIWPFRSRYSRI+PH    + +N RMSTGA
Sbjct: 301 RCLNWSRFSSIWPFRSRYSRINPHGDHNNPQNPRMSTGA 334

[Close]

BLAST of Spo04324.1 vs. UniProtKB/TrEMBL
Match: B9GU61_POPTR (Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0002s08630g PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 2.700e-89
Identity = 174/335 (51.94%), Postives = 221/335 (65.97%), Query Frame = 1


		  
Query: 1   MSLSPPRTRSNPTR-IYDSYWCYQCRRIVRLSSDNPSEIVCPRCFGQFLSEMEIPRPRLI 60
           MSLSPPRTR+N T   +  YWCYQC ++VR+++ +PSEI+CPRC GQFL E+ I RP L+
Sbjct: 1   MSLSPPRTRTNGTTGNFQPYWCYQCHQMVRIATTDPSEIICPRCSGQFLCEIGINRPILV 60

Query: 61  LDFTYDDPSPQARLLEALALMLDPPMRVRNHEPDTPWTVSRQRSSNRDVVLEGPTTERPR 120
           +DFT  DPSP+ARLLEAL+LMLDPP+R  N+  D P     +RS  R++ LE     R  
Sbjct: 61  VDFTAFDPSPEARLLEALSLMLDPPIRRFNYSLDEPEPEPPRRSWRRNLSLE--LDGRDN 120

Query: 121 WVRV-PQVSNRTRDDWDV--------EPGLRPRPR-WIVVRPTGFQPQGGAAVSQVGRPP 180
           W  + P++  R   DW +        EPG++ RPR WI  RP     +    +SQ   P 
Sbjct: 121 WDSLDPEIRPRRSRDWSLDGRGILEHEPGIQSRPRTWIQYRPRNPLGEPIEPLSQSENPV 180

Query: 181 QMESDPRNYFLGPGLQQLINDLTENDRQGPPPAPDTAIEAVPLVKLTAEHVAEGGSECPV 240
           +   DPR++F+G GL +LI  LT+NDRQGPPPAP+ AI+ +P VK+ A H+    S CPV
Sbjct: 181 RPLVDPRDFFVGSGLNELIEQLTQNDRQGPPPAPEIAIDTIPTVKIEASHLV-NDSHCPV 240

Query: 241 CKEEFEVGSEVRELPCKHVYHSDCIVPWLRLHNSCPVCRTELPVSSVRQCEGVGGVIESE 300
           C EEF+VG E RELPCKH+YHS+CIVPWLRLHNSCPVCR ELPV+S    +      + +
Sbjct: 241 CMEEFKVGGEARELPCKHIYHSECIVPWLRLHNSCPVCRKELPVNSESSAQ------DED 300

Query: 301 GSSIEDGRPRRCFNWNR-LSSIWPFRSRYSRISPH 324
                 GR  RC  W R LSS+WPFR+RY RISPH
Sbjct: 301 ECEDGGGRRGRCSRWRRQLSSLWPFRARYGRISPH 326

[Close]

BLAST of Spo04324.1 vs. UniProtKB/TrEMBL
Match: B9RJ66_RICCO (Zinc finger protein, putative OS=Ricinus communis GN=RCOM_1031870 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 2.600e-84
Identity = 177/371 (47.71%), Postives = 225/371 (60.65%), Query Frame = 1


		  
Query: 1   MSLSPPRTRSNP----TRIYDSYWCYQCRRIVRLSSDNPSEIVCPRCFGQFLSEMEIPRP 60
           MSLSPPRTR       TR +  YWCYQC R+VR+++ +PSEI+CPRC  QFL E+E+ R 
Sbjct: 1   MSLSPPRTRIRTYDATTRTFQPYWCYQCHRMVRIAASDPSEIICPRCSSQFLCELEMNRQ 60

Query: 61  RLILDFTYDDPSPQARLLEALALMLDPPMRVRNHEP-----DTPWTVSRQRSSNRDVVLE 120
           RL++DF   DPSP+ARLLEAL+L LDPP+R R         D P   +R RS       E
Sbjct: 61  RLVVDFAAFDPSPEARLLEALSLTLDPPIRRRRRRTLDFGLDEPEWGTRGRSWFGRPNPE 120

Query: 121 GPTTERPRWVRVPQVSNRTRDDWDVEPGLRPRPR-WIVVRP----TGFQPQGGAAVSQVG 180
                R R  R    S   RD+W+ EPG++P PR WIV+RP    +  QP      S+ G
Sbjct: 121 AEIHPRRRRNR----SLDGRDNWEEEPGIQPSPRTWIVLRPFDPFSPIQPN-----SRTG 180

Query: 181 RPPQMESDPRNYFLGPGLQQLINDLTENDRQGPPPAPDTAIEAVPLVKLTAEHVAEGGSE 240
                 ++PR+YFLGPGL  LI  LT++DR GPPPAP++ + A+P VK+ A H+    S+
Sbjct: 181 NLIPPRANPRDYFLGPGLNDLIEQLTQDDRPGPPPAPESTVGAIPSVKINASHLV-NDSD 240

Query: 241 CPVCKEEFEVGSEVRELPCKHVYHSDCIVPWLRLHNSCPVCRTELPVSSVRQCEGVGGVI 300
           CPVCKEEF+VG E RELPCKH+YH+DCIVPWLRLHNSCPVCR  LPV             
Sbjct: 241 CPVCKEEFKVGGEARELPCKHIYHTDCIVPWLRLHNSCPVCRQALPVLPENITLPENSTT 300

Query: 301 ESEGSSIEDGRPR--RCFNWNR-LSSIWPFRSRYSRISPHDVRNTRMSTGAFLLTCTLCL 355
           +++    EDG     RC  W R L+++WPFR RY RI+PH   +   S G   L     L
Sbjct: 301 QNDQECQEDGEGTNGRCLRWRRQLANLWPFRPRYGRIAPHGEDHVGTSQGGKALWKRRPL 360

[Close]

BLAST of Spo04324.1 vs. ExPASy Swiss-Prot
Match: RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 4.400e-40
Identity = 109/322 (33.85%), Postives = 162/322 (50.31%), Query Frame = 1


		  
Query: 19  YWCYQCRRIVRLSSDNPS-EIVCPRCFGQFLSEMEIPRPRLILDFTYDDPSPQARLLEAL 78
           ++CYQC R V ++   PS +  CP C   FL E + P P     F   +P+P +     L
Sbjct: 23  FFCYQCNRTVNVTISPPSSDPTCPICNEGFLEEYDNPNPNQGSGFL--NPNPNSIPFHDL 82

Query: 79  ALMLDPPMRVRNHEPDT-PWTVSRQRSSNRDVVLEGPTTERPRWVRVPQVSNRTRDDWDV 138
            L L  P    +  P   P + S   SS+  +    P+   P         +   D +  
Sbjct: 83  FLTLSDPFA--SLLPLLFPSSSSTTTSSSASIDPNNPSLSGP-------TRSGRGDPFAF 142

Query: 139 EPGLRPRPRWIVVRPTGFQPQGGAAVSQVGRPPQMESDPRNYFLGPGLQQLINDLTEND- 198
           +P    +     +R +G Q +     +   +  ++ ++  +YF+GPGL+QLI  L END 
Sbjct: 143 DPFTFIQNHLNDLRSSGAQIEFVIQNNPSDQGFRLPANIGDYFIGPGLEQLIQQLAENDP 202

Query: 199 -RQGPPPAPDTAIEAVPLVKLTAEHVAEGGSECPVCKEEFEVGSEVRELPCKHVYHSDCI 258
            R G PPA  +AIEA+PLV +T  ++    ++C VC ++FE G+E +++PCKH+YH DC+
Sbjct: 203 NRYGTPPASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCL 262

Query: 259 VPWLRLHNSCPVCRTELPVSS------VRQCEGVGGVIESEGS-SIEDGRPRRCFNWNRL 318
           +PWL LHNSCPVCR ELP         VR  +G  G  + + S    DG  R      R+
Sbjct: 263 LPWLELHNSCPVCRHELPTDDPDYERRVRGAQGTSGGNDGDNSGQRSDGDNRTVERSFRI 322

Query: 319 SSIWPFRSRYSRISPHDVRNTR 330
           S  WPF++R    +P D   TR
Sbjct: 323 SLPWPFQARGPGPAPGDNAETR 333

[Close]

BLAST of Spo04324.1 vs. ExPASy Swiss-Prot
Match: RHC1A_ARATH (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana GN=RHC1A PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 3.300e-35
Identity = 73/151 (48.34%), Postives = 92/151 (60.93%), Query Frame = 1


		  
Query: 177 NYFLGPGLQQLINDLTEND-RQGPPPAPDTAIEAVPLVKLTAEHVAEGGSECPVCKEEFE 236
           +YF GPGL++L   L+    R+GPPPAP +AI+A+P +K+   H+    S CPVCK+EFE
Sbjct: 139 DYFFGPGLEELFEQLSAGTTRRGPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFE 198

Query: 237 VGSEVRELPCKHVYHSDCIVPWLRLHNSCPVCRTEL-----PVSSVRQCEGVGGVIESEG 296
           +GSE +++PC H+YHSDCIVPWL  HNSCPVCR EL     P SS  +         S  
Sbjct: 199 LGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPSASGPSSSQNRTTPTRNYRSSSS 258

Query: 297 SSIEDGRPRRCFNWNRLSSIWPFRSRYSRIS 322
           SS  + R       N  SS WPFRS  S  S
Sbjct: 259 SSSSNSRENGNERRNPFSSFWPFRSSGSSSS 289

[Close]

BLAST of Spo04324.1 vs. ExPASy Swiss-Prot
Match: RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.700e-31
Identity = 71/155 (45.81%), Postives = 93/155 (60.00%), Query Frame = 1


		  
Query: 173 SDPRN--------YFLGPGLQQLINDLTEND--RQGPPPAPDTAIEAVPLVKLTAEHVAE 232
           SDP N        YF GPGL+QLI  L END  R G PPA  +AI+A+P VK+T + +  
Sbjct: 152 SDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKS 211

Query: 233 GGSECPVCKEEFEVGSEVRELPCKHVYHSDCIVPWLRLHNSCPVCRTELPVSS---VRQC 292
             ++C VC +EFE GS+V+++PCKHV+H DC++PWL LHNSCPVCR ELP        + 
Sbjct: 212 EMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPDYENRS 271

Query: 293 EGVGGVIESEGSSIEDGRPRRCFNWNRLSSIWPFR 315
           +G  G  + +GS      PR       +   WPFR
Sbjct: 272 QGSQGSGDGQGSVEGQQTPR-----FSIQLPWPFR 301

[Close]

BLAST of Spo04324.1 vs. ExPASy Swiss-Prot
Match: RHC2A_ARATH (Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana GN=RHC2A PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.300e-28
Identity = 94/303 (31.02%), Postives = 136/303 (44.88%), Query Frame = 1


		  
Query: 18  SYWCYQCRRIVRLSSDNPSEIVCPRCFGQFLSEMEIPRPRLILDFTYDDPSPQARLLEAL 77
           SYWCY C R V +S      I CP C G FL  ++ P     LDFT  D        +  
Sbjct: 5   SYWCYSCSRFVWVSDS----ISCPDCDGGFLELIQEP-----LDFTPSDSFTTTTTTQHR 64

Query: 78  ALMLDPPMRVRNHEPD---------TPWTVSRQRSS---NRDVVLEGPTTERPRWVRVPQ 137
           +    PP    +  P          TP  V+R RS+   N  +VL G +   P    V +
Sbjct: 65  SPTRFPPPSSSSSTPSASMHADNSPTPTIVTRTRSNRSPNPVIVLRG-SAAAPSSDVVSE 124

Query: 138 VSNRTRD----DWDVEPGLRPRPRWIVVRPTGFQPQGGAAVSQVGRPPQMESDPRNYFLG 197
             +R+      D   + GLRP P                        P M      + LG
Sbjct: 125 GLDRSAFQMYYDDGTDSGLRPLP------------------------PSMTE----FLLG 184

Query: 198 PGLQQLINDLTENDRQGP--------PPAPDTAIEAVPLVKLTAEHV-AEGGSECPVCKE 257
            G  +L++ +++ +            PPA  +AIEA+PL+++   H+ ++  S C VCKE
Sbjct: 185 SGFDRLLDQISQIELNTNRNLRSCEHPPASKSAIEALPLIEIDPTHLLSDSQSHCAVCKE 244

Query: 258 EFEVGSEVRELPCKHVYHSDCIVPWLRLHNSCPVCRTELPVSSVRQCEGVGGVIESEGSS 296
            F + S  RE+PC H+YH DCI+PWL + NSCPVCR ELP   +   +G G  + +  ++
Sbjct: 245 NFVLKSSAREMPCNHIYHPDCILPWLAIRNSCPVCRHELPAEDL--TDGTGAALTAVTAT 267

[Close]

BLAST of Spo04324.1 vs. ExPASy Swiss-Prot
Match: RDUF2_ARATH (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana GN=DURF2 PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.300e-28
Identity = 91/291 (31.27%), Postives = 132/291 (45.36%), Query Frame = 1


		  
Query: 4   SPPRTRSNPTRIYDSYWCYQCRRIVRLSSDNPS----EIVCPRCFGQFLSEMEIPRPRLI 63
           S P T +  T I  SYWCY C R V + +D  +     + CP C G F+ ++        
Sbjct: 3   STPTTPTTTTPITASYWCYSCTRFVSVWADQGTTTVGSVACPHCDGGFIEQIN------- 62

Query: 64  LDFTYDDPSPQARLLEALALMLDPPMRVRNHEPDTPWTVSRQRSSNRD-----VVLEGPT 123
                D  S       A  L +     VR+   +    + R+RS  R      +VL+G  
Sbjct: 63  -----DSSSA------ATELTIPASTEVRSINNNRRSVIRRRRSGRRPSFNPVIVLQGGA 122

Query: 124 TERPRWVRVPQVSNRTRDDWDVEPG----LRPRPRWIVVRPTGFQPQGGAAVSQVGRPPQ 183
            ER          +R   ++  + G    LRP P                +VS++     
Sbjct: 123 GEREEGEEGDAARDRRAFEFYYDDGSGSGLRPLPD---------------SVSEI----- 182

Query: 184 MESDPRNYFLGPGLQQLINDLTEND-------RQGPPPAPDTAIEAVPLVKLTAEHVAEG 243
                    +G G ++L+  L++ +       R G PPA  +AIE++P V+++  H+   
Sbjct: 183 --------LMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAIESLPRVEISDCHI--- 242

Query: 244 GSE--CPVCKEEFEVGSEVRELPCKHVYHSDCIVPWLRLHNSCPVCRTELP 273
           GSE  C VC E FE  +E RE+PCKH++H DCIVPWL + NSCPVCR ELP
Sbjct: 243 GSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFELP 244

[Close]

BLAST of Spo04324.1 vs. TAIR (Arabidopsis)
Match: AT1G60360.1 (RING/U-box superfamily protein)

HSP 1 Score: 244.6 bits (623), Expect = 9.300e-65
Identity = 142/341 (41.64%), Postives = 192/341 (56.30%), Query Frame = 1


		  
Query: 1   MSLSPPRTRSNPT-----RIYDSYWCYQCRRIVRLSSDNPSEIVCPRCFGQFLSEMEI-P 60
           MSLS P TR++       R +  YWCY C R+VR++S NPSEI CPRC  QF+ E+E   
Sbjct: 1   MSLSQPITRTDSAPNGAFRTFGLYWCYHCDRMVRIASSNPSEIACPRCLRQFVVEIETRQ 60

Query: 61  RPRLILDFTYD--DPSPQARLLEALALMLDPPMRVRNHEPDTPWTVSRQRSSNRDVVLEG 120
           RPR   +      D SP+ARLLEAL+LM +P    R      P+  +R R+     +LE 
Sbjct: 61  RPRFTFNHATPPFDASPEARLLEALSLMFEPATIGRFGAD--PFLRARSRN-----ILEP 120

Query: 121 PTTERPRWVRVPQVSNRTRDDWDVEPGLRPRPR--WIVVRPTGFQPQGGAAVSQVGRPPQ 180
            +  RP+  R   + N       V  G  P PR  ++++RP       G  ++   + P 
Sbjct: 121 ESRPRPQHRRRHSLDN-------VNNGGLPLPRRTYVILRPNNPTSPLGNIIAPPNQAPP 180

Query: 181 MESDPRNYFLGPG-LQQLINDLTENDRQGPPPAPDTAIEAVPLVKLTAEHVAEGGSECPV 240
              +  +YF G   L+QLI  LT++DR GPPPA +  I ++P VK+T +H+    S+C V
Sbjct: 181 RHVNSHDYFTGASSLEQLIEQLTQDDRPGPPPASEPTINSLPSVKITPQHLTNDMSQCTV 240

Query: 241 CKEEFEVGSEVRELPCKHVYHSDCIVPWLRLHNSCPVCRTELPVSSVRQCEGVGGVIESE 300
           C EEF VG +  ELPCKH+YH DCIVPWLRL+NSCP+CR +LP+        V  V ES 
Sbjct: 241 CMEEFIVGGDATELPCKHIYHKDCIVPWLRLNNSCPICRRDLPL--------VNTVAESR 300

Query: 301 GSS---IEDGRPRRCFNWNRLSSIWPFRSRYSRISPHDVRN 328
             S    +D   RR   W +L +IWPFR+RY R+SP +  N
Sbjct: 301 ERSNPIRQDMPERRRPRWMQLGNIWPFRARYQRVSPEETAN 319

[Close]

BLAST of Spo04324.1 vs. TAIR (Arabidopsis)
Match: AT2G40830.2 (RING-H2 finger C1A)

HSP 1 Score: 150.6 bits (379), Expect = 1.800e-36
Identity = 73/151 (48.34%), Postives = 92/151 (60.93%), Query Frame = 1


		  
Query: 177 NYFLGPGLQQLINDLTEND-RQGPPPAPDTAIEAVPLVKLTAEHVAEGGSECPVCKEEFE 236
           +YF GPGL++L   L+    R+GPPPAP +AI+A+P +K+   H+    S CPVCK+EFE
Sbjct: 139 DYFFGPGLEELFEQLSAGTTRRGPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFE 198

Query: 237 VGSEVRELPCKHVYHSDCIVPWLRLHNSCPVCRTEL-----PVSSVRQCEGVGGVIESEG 296
           +GSE +++PC H+YHSDCIVPWL  HNSCPVCR EL     P SS  +         S  
Sbjct: 199 LGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPSASGPSSSQNRTTPTRNYRSSSS 258

Query: 297 SSIEDGRPRRCFNWNRLSSIWPFRSRYSRIS 322
           SS  + R       N  SS WPFRS  S  S
Sbjct: 259 SSSSNSRENGNERRNPFSSFWPFRSSGSSSS 289

[Close]

BLAST of Spo04324.1 vs. TAIR (Arabidopsis)
Match: AT3G56580.2 (RING/U-box superfamily protein)

HSP 1 Score: 146.7 bits (369), Expect = 2.600e-35
Identity = 71/155 (45.81%), Postives = 97/155 (62.58%), Query Frame = 1


		  
Query: 177 NYFLGPGLQQLINDLTENDR-QGPPPAPDTAIEAVPLVKLTAEHVAEGGSECPVCKEEFE 236
           +YF GPGL++LI  L+     +GPPPAP ++I+A+P +K+T +H+    S CPVCK+EFE
Sbjct: 135 DYFFGPGLEELIEQLSSGTHHRGPPPAPKSSIDALPTIKITQKHLKSSDSHCPVCKDEFE 194

Query: 237 VGSEVRELPCKHVYHSDCIVPWLRLHNSCPVCRTELPVSSVRQCEGVGGVIESEGSSIED 296
           + SE +++PC H+YHSDCIVPWL  HNSCPVCR ELP        G     +S  +   +
Sbjct: 195 LKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELP------SRGSSSSTQSSQNRSTN 254

Query: 297 GRPRRCFNWNRLSSIWPFRSRYSRISPH--DVRNT 329
           GR       N  S++WPFRS  S  + +  D  NT
Sbjct: 255 GR-ENSRRRNIFSNLWPFRSSSSSSTQNRRDTNNT 282

[Close]

BLAST of Spo04324.1 vs. TAIR (Arabidopsis)
Match: AT3G19950.1 (RING/U-box superfamily protein)

HSP 1 Score: 137.1 bits (344), Expect = 2.100e-32
Identity = 71/155 (45.81%), Postives = 93/155 (60.00%), Query Frame = 1


		  
Query: 173 SDPRN--------YFLGPGLQQLINDLTEND--RQGPPPAPDTAIEAVPLVKLTAEHVAE 232
           SDP N        YF GPGL+QLI  L END  R G PPA  +AI+A+P VK+T + +  
Sbjct: 152 SDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKS 211

Query: 233 GGSECPVCKEEFEVGSEVRELPCKHVYHSDCIVPWLRLHNSCPVCRTELPVSS---VRQC 292
             ++C VC +EFE GS+V+++PCKHV+H DC++PWL LHNSCPVCR ELP        + 
Sbjct: 212 EMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPDYENRS 271

Query: 293 EGVGGVIESEGSSIEDGRPRRCFNWNRLSSIWPFR 315
           +G  G  + +GS      PR       +   WPFR
Sbjct: 272 QGSQGSGDGQGSVEGQQTPR-----FSIQLPWPFR 301

[Close]

BLAST of Spo04324.1 vs. TAIR (Arabidopsis)
Match: AT5G59550.1 (zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 127.9 bits (320), Expect = 1.300e-29
Identity = 91/291 (31.27%), Postives = 132/291 (45.36%), Query Frame = 1


		  
Query: 4   SPPRTRSNPTRIYDSYWCYQCRRIVRLSSDNPS----EIVCPRCFGQFLSEMEIPRPRLI 63
           S P T +  T I  SYWCY C R V + +D  +     + CP C G F+ ++        
Sbjct: 3   STPTTPTTTTPITASYWCYSCTRFVSVWADQGTTTVGSVACPHCDGGFIEQIN------- 62

Query: 64  LDFTYDDPSPQARLLEALALMLDPPMRVRNHEPDTPWTVSRQRSSNRD-----VVLEGPT 123
                D  S       A  L +     VR+   +    + R+RS  R      +VL+G  
Sbjct: 63  -----DSSSA------ATELTIPASTEVRSINNNRRSVIRRRRSGRRPSFNPVIVLQGGA 122

Query: 124 TERPRWVRVPQVSNRTRDDWDVEPG----LRPRPRWIVVRPTGFQPQGGAAVSQVGRPPQ 183
            ER          +R   ++  + G    LRP P                +VS++     
Sbjct: 123 GEREEGEEGDAARDRRAFEFYYDDGSGSGLRPLPD---------------SVSEI----- 182

Query: 184 MESDPRNYFLGPGLQQLINDLTEND-------RQGPPPAPDTAIEAVPLVKLTAEHVAEG 243
                    +G G ++L+  L++ +       R G PPA  +AIE++P V+++  H+   
Sbjct: 183 --------LMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAIESLPRVEISDCHI--- 242

Query: 244 GSE--CPVCKEEFEVGSEVRELPCKHVYHSDCIVPWLRLHNSCPVCRTELP 273
           GSE  C VC E FE  +E RE+PCKH++H DCIVPWL + NSCPVCR ELP
Sbjct: 243 GSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFELP 244

The following BLAST results are available for this feature:

BLAST of Spo04324.1 vs. NCBI nr
BLAST of Spo04324.1 vs. UniProtKB/TrEMBL
BLAST of Spo04324.1 vs. ExPASy Swiss-Prot
BLAST of Spo04324.1 vs. TAIR (Arabidopsis)

BLAST of Spo04324.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902179008\|gb\|KNA09271.1\|	1.0e-214	100.	hypothetical protein SOVF_1552...	[more]
gi\|731375515\|ref\|XP_010667286.1\|	1.1e-152	75.4	PREDICTED: E3 ubiquitin-protei...	[more]
gi\|731375517\|ref\|XP_010667287.1\|	2.3e-142	74.6	PREDICTED: E3 ubiquitin-protei...	[more]
gi\|224066851\|ref\|XP_002302246.1\|	3.9e-89	51.9	zinc finger family protein [Po...	[more]
gi\|743845769\|ref\|XP_011027569.1\|	4.1e-86	48.3	PREDICTED: E3 ubiquitin-protei...	[more]

BLAST of Spo04324.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QRX9_SPIOL	7.2e-215	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8DXA5_BETVU	7.8e-153	75.4	Uncharacterized protein OS=Bet...	[more]
A0A0J8B2Z5_BETVU	1.6e-142	74.6	Uncharacterized protein OS=Bet...	[more]
B9GU61_POPTR	2.7e-89	51.9	Zinc finger family protein OS=...	[more]
B9RJ66_RICCO	2.6e-84	47.7	Zinc finger protein, putative ...	[more]

BLAST of Spo04324.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
RING1_GOSHI	4.4e-40	33.8	E3 ubiquitin-protein ligase RI...	[more]
RHC1A_ARATH	3.3e-35	48.3	Probable E3 ubiquitin-protein ...	[more]
RNG1L_ARATH	3.7e-31	45.8	E3 ubiquitin-protein ligase RI...	[more]
RHC2A_ARATH	2.3e-28	31.0	Probable E3 ubiquitin-protein ...	[more]
RDUF2_ARATH	2.3e-28	31.2	E3 ubiquitin-protein ligase RD...	[more]

BLAST of Spo04324.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G60360.1	9.3e-65	41.6	RING/U-box superfamily protein	[more]
AT2G40830.2	1.8e-36	48.3	RING-H2 finger C1A	[more]
AT3G56580.2	2.6e-35	45.8	RING/U-box superfamily protein	[more]
AT3G19950.1	2.1e-32	45.8	RING/U-box superfamily protein	[more]
AT5G59550.1	1.3e-29	31.2	zinc finger (C3HC4-type RING f...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 226..268 score: 1.3
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 227..267 score: 8.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 227..268 score: 12
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 223..271 score: 5.9
None	No IPR available	PANTHER	PTHR22763	RING ZINC FINGER PROTEIN	coord: 14..332 score: 1.1
None	No IPR available	PANTHER	PTHR22763:SF88	RING/U-BOX DOMAIN-CONTAINING PROTEIN	coord: 14..332 score: 1.1
None	No IPR available	PFAM	PF14369	zinc_ribbon_9	coord: 18..51 score: 3.6
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 211..274 score: 8.95

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo01990	0.70	Barchart \| Table