Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTAAGGATAATTTCTTCAAAAGTGAGTTGTCTTTTTATCAACAAGTTTTCTTCTTCTACTACATCTCTGGAAAATCTAAATAGTGTTCGTCACTCCCAAACACCAAAAAAAAGCGCCGAAAAACTCGAATACAGAAAATAAAGCGTCATTTCGTCCCATCCATGGCTTCTCGACTTCAACGCCACAAATTTGCCTGGAGAGTTCTTATGGTTTCAAACTTCGGTGTTGCAGGTTACTCCTCCCCTAATTGCTCTACATTTGCTATTAATTACAGCTTTTCTGTTCCTTAATTGTTCCTTAATTGTTGAGTAATTACTTCTAATTTTGCAATTTATCGCTGGATTTCTCCTTGTTTCTTTCGGTTGTTGCAATTTTGATCACACTTTTTATTGTGTTTGAGTTATACTTCGAATTGGGGTAACGCAATCGAAAGAAGGATCTCGTTTGTGATTGTTCGGACAATTATTTCTGGTTTCTAGGGTCTTGATGTGTAATACACATTGTTTTTAGATTTTCTTGGGGGTTTAGGGATACCGTCATACCGGGTATGTATTAGAAGGGTTTTGTTTGCCATAGTGGATGAACAGATGAACTGCAGAAGAAGGGGGGTAGAGAAATTAGGGTGTGGGTTGAATACTTGAATTCTTGGTAAAATGATTATTCGGTTTCCCTCTCTTCGTTAATCCCATTCATTTCTCAAGATTACAGTCGAGCAAAAGGGCTTGTATTGTCTAGCAGAATAGTTTACATTCAGAAATCTTGATATTATTTGAGTTGAGGGTGTTGTACTAGTGTAGTGTAGTTCTTGTTAAGATGATTATTCGATTTCCTCGCTTCATTAATCCCATTCTTTTTTCAAGATTACATTTGAACAAACTCGTATTGTCTATCAGAATAGTTTAAATTCAGAAATCTTGATATTCTTTGATTTGAGGGAATTGTACTAGTGTAGTATAGTGTTATCAGGATTTTGCAAATGATGAGCATATAGAATTATGGACTTCTTAATTTTATGGTGGAGGCTAGATTATTTACAGAATACAGATATCTCAATGTTGACAAATCACGCCATATCCAAGTCCTATCTGAGCAATCATCTTTTATGGGTGACTACTGACTAGGCAATGATAGGGAATCTAACACTAGATAGATGATTACTTGTGGGTTTTGGAGAATGTATTCATCAATTGTCACCCTTAGGCCTTAGCTGAGGTATTACCTAATACTTCATATGTTGACTAACTAGAAGCGATTATCTGATTGATGACCAACATTGTTGAAGTTCAGGAATCTTGCATTTTTAGCTTCGGCAGTACAGTTTGATAAAGAGGTTGGGGTACGGGGTAGGGGGTAGGGGAAGGTAACAACATGATCACTCAAACTTTGTTGTTTATCAGTAGCTTGCCTAGTTACCTCAACTTCTTTTGAGTTTTATTCTGGTATAATTTGTAAGACTTCAAAGAGCAAACATAGTTTTCCTGTGCGTAGATTTGTATGGATCTCGAACTTAGCTGTACTAGTTATTTGTCAGTTGTTTTCTTTCTTTCTGTCCTTTGTCTCTGTCTCTTGTACATGATAATCATTATCCTTCTGCTGTTACCTCTTAGCACCAGCAGGGTTGGAATTCATAATCTGATCTCAAGAGTCTACATCAGGCATTGTTTGGTTGAGTTTTTGATGCTGTTGTATTTGCATGCCATGTATGTCATGGACTGTTCTAACCATTATTCAGATTGCATTCTGACTGAGATTCATCTCGTTCTAGCCACTTCAAAACTTTGTATGCCTTACTATTTTTGTGAATTCTTGAAGGTGAACACTTATGTAGTTGTGTTGAATGTGTGGTAGTAAGATGATCCTGCTATTTCTTTGTGTCATAAAAAAGATTTCTTCTGCTTCACACAACTTTATGAGTGGTTATGTGTTAGCGTGTCGCCCATTGTTTGAACTTTGAACAGCATCTGCTTAGCATGAATGTTTAGAAGAATGTCTTACCTGTCTAGTTATGATCTTTCTAATTTGCTTCACCCAGTTCCTTTGTGTTTTGAAGACCAATATTGATAAACCAAGTAGTTCAAATTGATCTGTGTTGGTCAGACTCTTTGATATAGACCAAAGAACTCATGCCTGGTTTAATATACTCAAGTATTCGGAACATGGCATTCAGAATTTCACACTAATTGACTTAAGATTCTGGTAATGGTGCTCTCATAGTGGCCTCCAATCTTTTTTTGAGAGAAAGATAGCACGGGCATTTAGTATAGTAAATCAATTTCCGCCAAAGCAGTGATGCTTTGTGGGAACGAACCAATACAAAATAACTCAGAGTTACTACTTGTATCCCACCTTGCCACCATGTGGGCTACAGTATTACATGCCCGTTTAACATGAGAAAAAACACAATAATCAAAATTAAGGCTATCATTCCTAATGTCGTCATAGATCAAGTAGATAGGAGAAAACCCAATGACCGTACTCTTTGCTGCATGTATTACATTGAGAGCATCACTTCCAACCACTATATGACCATATGCAAATCTCCTAGCAATGTGTAGACCATACCTTTACCGCCTTTGCCTCTGCTATATCTGGAGAAGTAGCTTGTATCTTTTTTGTTGCAGCCACTAATAGCTTCCCCTCACTATCTCTGACCACTACCCCAAGAGCTGCCATAACACCATCAACTTAGTGTGCGTCAGTATTTATCTTTATTACCCAGGCATAGGACAAGACCATGAGGATGGAGACTGCACAACCATATTGGTTGAGTTTGAAGGCATAAAAACCTTCTTCGTGTAGCTCCGATATTCCTCTACCATTCTCACATAACCAGTAGCTATTGTTACAGCATCAGGCTTCTCGTGCTCGAAAAATATCTTATTTCTACACGTCCAGGCAGCCCACATTAGAGCAGCCATCGTGCGCAAGTCATCTGGCCTCATCTTTCTCTTAAGCCATATCCATCTCGCATCTAAAGAAGACGTAGGAGCATCGATCAACTCGGTCTTTAGCACACTGTGTTCCCATATCGTTCTTGCTGCAGTACACTCGAACAAAGCATGAATTATCATCTCATTGTCCGACCCACATATTGGCCATATGGCATTTGGTGCAATGTGACGATATACTAGTCTTTCTCTAACTGCCAGACTTCCTTTTGCAAGCTCTCCACAAGAAATGTCTCAATTTTGGTGGTCCATCTATACTCCAAATACCTCTCCAAATCTCCTCATCAGACATAGCTTCACTCACTGACTCCAGCAGTCCCAGTTTTGCCAGCCAATACCCCGCCTTAACAGTATATACACCATCTTTTGATTGTCTCCAGTAAAGCTTGTCTTTTGTAGATCTCTCGTCTTCAGAAATGATGCATTAGGTTTATGTTTATTCGCTATTATAAGATATGTGTGAATTACAATTAACAGGACACTATTGTTTTTGTCATTGTCTAGAAGATTGGAGTAATTTATACTCTTATTACAATATTTTATCCTCGAAGATAAGACCATTCCAATATGTGCTTAAAATTTCTGATTTGAAATTGTTTTTGCCGCTTTGTTAATTATCTTTGCCCTTCTTTCTAGGTGTTTGTTGTATTGGATGCAATTAGGAAAGAATTTTATTTGTTAGTTCATTTAGTTATGTTTTTAATGCTTAAACTTTAATAGATACTTGATGGAAAATTTTCAACAAATGCAGCTTATATTTTTGGAATGAATAAAAAGAAAGAGGGAAGTTCGAAAAGCGAAAAACATGAAGAAGCTCCACTTGTTGCTGGTACAAGTACATCAAAAGTCAGTTCCGAGCCAAAAACTGAACCACCAACCCCAATTGCAGAGATTTTACCAGCAGTCATCAGTTTCATGGAGGAGCCAGGATTCAACCCTGAAACTTCAACTGGTACAAGTGCACCAATGGTCAATTGTATGGAGGAATCAGAAATGATACCAGCTACCCCAATTGCCGAGCTTGTGAAGGTGCGTGAGCCAATTGCCGAGGATCAACAACGACAGCTTTTCGGGTGGATGTTGGATGAGAAGAGAAAGGTAAAAACCAAAGACAGAGATGAAAAGAAGCAAATTGATGAAGATAAGGCCATACTCAAGCAGTTTATCAGGGAGAAATCAATCCCTGATATTTAGCCCAGACCTGTTCAATGGGGTGGGTTAAGGCCAGGCCGGGCCAAGAGCCTGGTTGTTCGGATCCAGCCCGTTAAAATTTTAGCCTCTATAACTGTCGCTGCCTTTATTCTTTGAACCTGGTTGTTCGGGTCCTGCAACTTGTCTGTCTAACTCTAACAGGAAATATCTCAGAGGTTTGAGCCATTTTTTTGGGTGCTCAATTTAGTGGTTTTAGGGCTGTGTTAGGGGTAAATATTCATGCCTACGTTTTTACGGAGTATAAAGGAATTAACTCCATTTCAGAGTTAAAGAGTTTTCTAATACCAGAAATTTGTTCATTTGTGAACCAGAACGTTTATGAAGCTGATCAAGGAAAGAATTTTCAATATTCAAAGGGCTTGTGAATTTGTGATCATTGATCTGTTTAATGACTAAGAAGATTGTATTATGTTGATTCCTTATACTGCATATGTGTTTTCTTCAGCATTTTAATGTCTTAGGTTCATTAGAAAATGATTGAAATCGGGAACAAAGGCACGCGCCACTCCTAGGTAAAGATGGATGTGGANTTAGAAAATGATTGAAATCGGGAACAAAGGCACGCGCCACTCCTAGGTAAAGATGGATGTGGATCGGGCTTTGTGCTGAGCCCATGGGCCGTGACCTGAACGGGCCTGCCCCCCCCCC AATTAAGGATAATTTCTTCAAAAGTGAGTTGTCTTTTTATCAACAAGTTTTCTTCTTCTACTACATCTCTGGAAAATCTAAATAGTGTTCGTCACTCCCAAACACCAAAAAAAAGCGCCGAAAAACTCGAATACAGAAAATAAAGCGTCATTTCGTCCCATCCATGGCTTCTCGACTTCAACGCCACAAATTTGCCTGGAGAGTTCTTATGGTTTCAAACTTCGGTGTTGCAGCTTATATTTTTGGAATGAATAAAAAGAAAGAGGGAAGTTCGAAAAGCGAAAAACATGAAGAAGCTCCACTTGTTGCTGGTACAAGTACATCAAAAGTCAGTTCCGAGCCAAAAACTGAACCACCAACCCCAATTGCAGAGATTTTACCAGCAGTCATCAGTTTCATGGAGGAGCCAGGATTCAACCCTGAAACTTCAACTGGTACAAGTGCACCAATGGTCAATTGTATGGAGGAATCAGAAATGATACCAGCTACCCCAATTGCCGAGCTTGTGAAGGTGCGTGAGCCAATTGCCGAGGATCAACAACGACAGCTTTTCGGGTGGATGTTGGATGAGAAGAGAAAGGTAAAAACCAAAGACAGAGATGAAAAGAAGCAAATTGATGAAGATAAGGCCATACTCAAGCAGTTTATCAGGGAGAAATCAATCCCTGATATTTAGCCCAGACCTGTTCAATGGGGTGGGTTAAGGCCAGGCCGGGCCAAGAGCCTGGTTGTTCGGATCCAGCCCGTTAAAATTTTAGCCTCTATAACTGTCGCTGCCTTTATTCTTTGAACCTGGTTGTTCGGGTCCTGCAACTTGTCTGTCTAACTCTAACAGGAAATATCTCAGAGGTTTGAGCCATTTTTTTGGGTGCTCAATTTAGTGGTTTTAGGGCTGTGTTAGGGGTAAATATTCATGCCTACGTTTTTACGGAGTATAAAGGAATTAACTCCATTTCAGAGTTAAAGAGTTTTCTAATACCAGAAATTTGTTCATTTGTGAACCAGAACGTTTATGAAGCTGATCAAGGAAAGAATTTTCAATATTCAAAGGGCTTGTGAATTTGTGATCATTGATCTGTTTAATGACTAAGAAGATTGTATTATGTTGATTCCTTATACTGCATATGTGTTTTCTTCAGCATTTTAATGTCTTAGGTTCATTAGAAAATGATTGAAATCGGGAACAAAGGCACGCGCCACTCCTAGGTAAAGATGGATGTGGANTTAGAAAATGATTGAAATCGGGAACAAAGGCACGCGCCACTCCTAGGTAAAGATGGATGTGGATCGGGCTTTGTGCTGAGCCCATGGGCCGTGACCTGAACGGGCCTGCCCCCCCCCC ATGGCTTCTCGACTTCAACGCCACAAATTTGCCTGGAGAGTTCTTATGGTTTCAAACTTCGGTGTTGCAGCTTATATTTTTGGAATGAATAAAAAGAAAGAGGGAAGTTCGAAAAGCGAAAAACATGAAGAAGCTCCACTTGTTGCTGGTACAAGTACATCAAAAGTCAGTTCCGAGCCAAAAACTGAACCACCAACCCCAATTGCAGAGATTTTACCAGCAGTCATCAGTTTCATGGAGGAGCCAGGATTCAACCCTGAAACTTCAACTGGTACAAGTGCACCAATGGTCAATTGTATGGAGGAATCAGAAATGATACCAGCTACCCCAATTGCCGAGCTTGTGAAGGTGCGTGAGCCAATTGCCGAGGATCAACAACGACAGCTTTTCGGGTGGATGTTGGATGAGAAGAGAAAGGTAAAAACCAAAGACAGAGATGAAAAGAAGCAAATTGATGAAGATAAGGCCATACTCAAGCAGTTTATCAGGGAGAAATCAATCCCTGATATTTAG MASRLQRHKFAWRVLMVSNFGVAAYIFGMNKKKEGSSKSEKHEEAPLVAGTSTSKVSSEPKTEPPTPIAEILPAVISFMEEPGFNPETSTGTSAPMVNCMEESEMIPATPIAELVKVREPIAEDQQRQLFGWMLDEKRKVKTKDRDEKKQIDEDKAILKQFIREKSIPDI Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo04326.1 vs. NCBI nr
Match: gi|902179009|gb|KNA09272.1| (hypothetical protein SOVF_155220 [Spinacia oleracea]) HSP 1 Score: 270.0 bits (689), Expect = 2.800e-69 Identity = 142/157 (90.45%), Postives = 145/157 (92.36%), Query Frame = 1
BLAST of Spo04326.1 vs. NCBI nr
Match: gi|731375511|ref|XP_010667285.1| (PREDICTED: uncharacterized protein LOC104884345 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 134.8 bits (338), Expect = 1.400e-28 Identity = 84/170 (49.41%), Postives = 101/170 (59.41%), Query Frame = 1
BLAST of Spo04326.1 vs. NCBI nr
Match: gi|255572965|ref|XP_002527413.1| (PREDICTED: uncharacterized protein LOC8266970 [Ricinus communis]) HSP 1 Score: 102.1 bits (253), Expect = 1.000e-18 Identity = 70/165 (42.42%), Postives = 92/165 (55.76%), Query Frame = 1
BLAST of Spo04326.1 vs. NCBI nr
Match: gi|565352112|ref|XP_006342991.1| (PREDICTED: uncharacterized protein LOC102590613 [Solanum tuberosum]) HSP 1 Score: 99.0 bits (245), Expect = 8.600e-18 Identity = 63/166 (37.95%), Postives = 92/166 (55.42%), Query Frame = 1
BLAST of Spo04326.1 vs. NCBI nr
Match: gi|720081176|ref|XP_010242201.1| (PREDICTED: uncharacterized protein LOC104586613 [Nelumbo nucifera]) HSP 1 Score: 97.1 bits (240), Expect = 3.200e-17 Identity = 66/165 (40.00%), Postives = 84/165 (50.91%), Query Frame = 1
BLAST of Spo04326.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QPV3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_155220 PE=4 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 2.000e-69 Identity = 142/157 (90.45%), Postives = 145/157 (92.36%), Query Frame = 1
BLAST of Spo04326.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B6G5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_007790 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 9.800e-29 Identity = 84/170 (49.41%), Postives = 101/170 (59.41%), Query Frame = 1
BLAST of Spo04326.1 vs. UniProtKB/TrEMBL
Match: B9SN44_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0312590 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 7.000e-19 Identity = 70/165 (42.42%), Postives = 92/165 (55.76%), Query Frame = 1
BLAST of Spo04326.1 vs. UniProtKB/TrEMBL
Match: M0ZRA3_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400002500 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 6.000e-18 Identity = 63/166 (37.95%), Postives = 92/166 (55.42%), Query Frame = 1
BLAST of Spo04326.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QNK4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_165400 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 2.500e-16 Identity = 63/168 (37.50%), Postives = 89/168 (52.98%), Query Frame = 1
BLAST of Spo04326.1 vs. TAIR (Arabidopsis)
Match: AT2G19530.1 (unknown protein) HSP 1 Score: 89.4 bits (220), Expect = 2.400e-18 Identity = 69/177 (38.98%), Postives = 98/177 (55.37%), Query Frame = 1
BLAST of Spo04326.1 vs. TAIR (Arabidopsis)
Match: AT1G55160.3 (unknown protein) HSP 1 Score: 74.7 bits (182), Expect = 6.100e-14 Identity = 42/80 (52.50%), Postives = 56/80 (70.00%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo04326.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo04326.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo04326.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo04326.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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