Spo04371 (gene)

Overview
NameSpo04371
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr3 : 2502613 .. 2503900 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTGACTTATTTGGTAAGAGTTTTACATTAGATCTTAGAGGTATAGGGTTCGACCCACCAAGTGAGGGTGCTTGATGGTAGCTTTTTCTTACATTCCCCCATACTCCTAAGTTCATGACCCGCGCATACTGGACCAAAAAAACTGTGAGGGTTGAGGTTTAGTCAGGATTATTCTCCTTACCTTATACGAAATGAAAAATATGCACTACTTTGTTACAAGAAAGATAACTTAAACACAAAGTATTATATTAGAGAAATCAGAAATGGATAAGTTTATGTGACAACACATACTATTTCATAATTGTTATTTAAAATAACAAAAAAAAAATACGTGAGAACTACTAACTGAGATCTTCGTGGATCCATATTTTTTGGTGTCAATATCACCGTGAATCCGTGACATCATTGCATCTTGTCTTAAAACGTTAACGTTGATTGTTGGGAATTCATGAAAATATGACCATTGTGGTGTTTGGTGGTTGATGTGAATTTATGTAAGGAATAAAATATGAAATTTACAAAGTTACCCTTATCAGCAACTCTCCATCTCCATCTCCATCTCCTATCCAATTAATGACAATTTAGTCTTTTTATCCCATATCAATTCCCATCCAATAATACCATCCCCCTAGGTATTATTTTCATGTAAAATACAAGTTTTTATTTCCAATCCCATTTTATAATCTGAATCCCACATAACAAACATGGAAGTACGTAGAAAATGAGATTGAAACTCCCATTTCCATCCTCCATTTCCATAATGAAAATTGATTTTGGCACGCCATCTTGTGAGTAGAGCACAAAAAACTGTATCGACAATGAGTGTGTCAAAATCATTTTTGTGTACTACTACGTACTTCGCTTTATACTCCAAATATAGTACTCGTATAGTAGTATAGCTAATTTTGTCAAAATCTTAAGTTACAAGTACAGAGTAGAAATTAAGACACGATATACAATCTCGCCTACATCATTATTTTTTATTTTTTATTTTTTATTTTTAATGTTGCGATTTGTGAAGATATGATTAGGGTGCAATTTCTCCAAATCAACATTTGACGCTGCGGAGTGCGGACTACGACTAGTAGTACGAACACAATCGGAATTGGAAGCAATAAATTGCTCCCAATCCATTCCGATTCCCATTTCCCCATCTCAAAATCATCACACACAATCTTCTTCTTCATCGAACAAGAGGAAAGGATTCCGACCAAATTCAAGCTTCCCCAGAAAATCAAACGAACTCCGAATCGGAGATACCGAGAAACGATTCAATCCATCGTAG

mRNA sequence

ATGATTGACTTATTTGGTAAGAGTTTTACATTAGATCTTAGAGGGTGCAATTTCTCCAAATCAACATTTGACGCTGCGGAGTGCGGACTACGACTAGTAGTACGAACACAATCGGAATTGGAAGCAATAAATTGCTCCCAATCCATTCCGATTCCCATTTCCCCATCTCAAAATCATCACACACAATCTTCTTCTTCATCGAACAAGAGGAAAGGATTCCGACCAAATTCAAGCTTCCCCAGAAAATCAAACGAACTCCGAATCGGAGATACCGAGAAACGATTCAATCCATCGTAG

Coding sequence (CDS)

ATGATTGACTTATTTGGTAAGAGTTTTACATTAGATCTTAGAGGGTGCAATTTCTCCAAATCAACATTTGACGCTGCGGAGTGCGGACTACGACTAGTAGTACGAACACAATCGGAATTGGAAGCAATAAATTGCTCCCAATCCATTCCGATTCCCATTTCCCCATCTCAAAATCATCACACACAATCTTCTTCTTCATCGAACAAGAGGAAAGGATTCCGACCAAATTCAAGCTTCCCCAGAAAATCAAACGAACTCCGAATCGGAGATACCGAGAAACGATTCAATCCATCGTAG

Protein sequence

MIDLFGKSFTLDLRGCNFSKSTFDAAECGLRLVVRTQSELEAINCSQSIPIPISPSQNHHTQSSSSSNKRKGFRPNSSFPRKSNELRIGDTEKRFNPS
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo04371.1Spo04371.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo04371.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo04371.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo04371.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo04371.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0001510 RNA methylation
biological_process GO:0019852 L-ascorbic acid metabolic process
biological_process GO:0009407 toxin catabolic process
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0009636 response to toxic substance
biological_process GO:0010583 response to cyclopentenone
biological_process GO:0010731 protein glutathionylation
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006749 glutathione metabolic process
biological_process GO:0006508 proteolysis
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0009840 chloroplastic endopeptidase Clp complex
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009570 chloroplast stroma
molecular_function GO:0050897 cobalt ion binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0045174 glutathione dehydrogenase (ascorbate) activity
molecular_function GO:0004364 glutathione transferase activity
molecular_function GO:0005515 protein binding
RNA-Seq Expression