Spo04379 (gene)

Overview
NameSpo04379
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionHeavy metal transport/detoxification superfamily protein
Locationchr3 : 2632041 .. 2634151 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCTCACATAAATAGACTCACCTTATAGAGTATTATATCCCATTCCTTCTTACTTCACTACCTTCTTCTATTATTCTCTCTCCTCTAAACACAAATTCCACAAATCTCTAATCAAGAAAAGGAAAAAAGATCACTGAAAATGCAGGTTAGATCTCTTACCTTTCAACATTTCTCTCTATTTTATATGTTTGTTATTCCTTAATTAATATAATGTTTAGGGATAATTATTGTGGTTAGAGGATCGTATGATGAATTAATGATAGTTTTTCTATTCCCTTCAAGTAGAATGTCTTAGCTAGAATATTACCACTCACATTTCTGTAGCATGTTGGTGATGGGTTACTCACACGTAATTTGTCGCTAGACCTGATCAACTATACCCCAATCTGGTGGCCTGATTCGACCCGACTCGATCTGGAAAAGTCCATTTTGGCCCGAAAACCCGTATTAAATTTACGGGTTTGGGTATGAGTTTTTGTGTTAACGCCCTTCTGGCCTGAATTTTGATCAACTCTAACTGTCGCACATTAGATGAAGAAGAGAGAAAATATCAACTTATAAGTTTGAGAAATCACTCCTACAGTTCTAGTATACACCTATACACAGACACAATTGATTTTCATTTAGGATTTTAAGTGATTTCTAACTCTGCTCCTCCTTATTGGATTACTCGTGCTATATTCTATTCAATCAAATTTAACGGGGGTTTCTTATTCAAATACTAATGATTTTCCTACTTTGTTGGTTTTGTTCAGAAATTGATAGTGAAATTGGAAATCCACGATGATTTGAGCTGCAAGCAAAAGGCTATAAAACTGGTCTCTTCTATTTCTGGTAATTCCATGTCCCAAACTATCTTTTTCTTTTCAAATATAACTATCTCTGTTTAATACTCCCTCCGTCTTTTTTTGTTTTTTACGTATCGTATTTTGCACGCGTTTTAACGACTAATTAATGTGCATTGAGATTCTTCTAAGTTTTTCATGTAAACGAGGAAAATTACGTTTATTTATAATGTTTTCACTCTTATCAAAGTTCTGATATGGGGAAAATGAGAAAAAGTTAATGTCTTTATGGAAAAGTGTGAGTGACTAAATTACTCAATTGATTTAATTGGTTAATATAATAATTGGGTTCAAATTTTGATAGAATATTAAATCATTTATGTGATAATATAAAAGGAAATGTAAAGAACATTTTGAAACACCAAAAAAGGAAACGTAAAAAACAAAAAGAGACGGAGGGAGTACAAGTTATTGTAATAGACTGTTTAACGAAACTGTCAGATCCCATGTCATATCACCAATCTCCTTATACATTTGACATACTATTAAGCATACTATGCCATTTAATTAAGTGTAAGACAGTCCCATATGGAACTAGATTTTTTTTAGTTTTAATTTTTTTTTATATAATTGAATTTTAATAATTGTGGTTCAAAATTTTGCAGGGATTGATTCTATCTCAATGGACGGAAAGGAAAAGAAATTGACAGTAATAGGAGACATGGATCCTGTGGCAGTGGTGAAGAAATTAAGAAGGTACTACCATACTGAAATTGTCTCAGTTGGGCCTGCAAAAGAGCCTGAGAAGCCCAACGAAAAGCCCAAAGACGAGCCCAAACCCGTGGTCCCGGTAATGGATTTCATCCATGCAATGCAGGCCCATAACTCCAGTAATGCTACCTACATTGTTGATCCATTCTATTCTAGATACAATGGTTATTACAGAAGCGTGGAAGAAGATCCAAATGGTTGTGTTATTTGTTAACTAATCCTTTAAACTTAATATTTTTTTATTATTAATGGATAAGTTAAATTGTTAAGCTTGTTTAAGCAAGAGTAATAGAATGAGTGACCTTCTAGAAAGTTCTTGTATGACGCCACTTAAAGTGAACTTGTCTACTTTATGTTTAGAGTTTAGCTCATAATTAAGTTGTGATTAGAGAGTAGGATTGAACTGTAAAGTTCTCCATTTTTTACATTTGTGCCAATTATTGTATTGATTTGTTACTAGATTAAATCAATAAACGCCGTACTTACAAACTTTATATCCGTCAAAGTGAATGTTCTTTTTTTTTTTTTTTTTACAACGGACCCAACTTATTGTAG

mRNA sequence

TTCTCACATAAATAGACTCACCTTATAGAGTATTATATCCCATTCCTTCTTACTTCACTACCTTCTTCTATTATTCTCTCTCCTCTAAACACAAATTCCACAAATCTCTAATCAAGAAAAGGAAAAAAGATCACTGAAAATGCAGAAATTGATAGTGAAATTGGAAATCCACGATGATTTGAGCTGCAAGCAAAAGGCTATAAAACTGGTCTCTTCTATTTCTGGGATTGATTCTATCTCAATGGACGGAAAGGAAAAGAAATTGACAGTAATAGGAGACATGGATCCTGTGGCAGTGGTGAAGAAATTAAGAAGGTACTACCATACTGAAATTGTCTCAGTTGGGCCTGCAAAAGAGCCTGAGAAGCCCAACGAAAAGCCCAAAGACGAGCCCAAACCCGTGGTCCCGGTAATGGATTTCATCCATGCAATGCAGGCCCATAACTCCAGTAATGCTACCTACATTGTTGATCCATTCTATTCTAGATACAATGGTTATTACAGAAGCGTGGAAGAAGATCCAAATGGTTGTGTTATTTGTTAACTAATCCTTTAAACTTAATATTTTTTTATTATTAATGGATAAGTTAAATTGTTAAGCTTGTTTAAGCAAGAGTAATAGAATGAGTGACCTTCTAGAAAGTTCTTGTATGACGCCACTTAAAGTGAACTTGTCTACTTTATGTTTAGAGTTTAGCTCATAATTAAGTTGTGATTAGAGAGTAGGATTGAACTGTAAAGTTCTCCATTTTTTACATTTGTGCCAATTATTGTATTGATTTGTTACTAGATTAAATCAATAAACGCCGTACTTACAAACTTTATATCCGTCAAAGTGAATGTTCTTTTTTTTTTTTTTTTTACAACGGACCCAACTTATTGTAG

Coding sequence (CDS)

ATGCAGAAATTGATAGTGAAATTGGAAATCCACGATGATTTGAGCTGCAAGCAAAAGGCTATAAAACTGGTCTCTTCTATTTCTGGGATTGATTCTATCTCAATGGACGGAAAGGAAAAGAAATTGACAGTAATAGGAGACATGGATCCTGTGGCAGTGGTGAAGAAATTAAGAAGGTACTACCATACTGAAATTGTCTCAGTTGGGCCTGCAAAAGAGCCTGAGAAGCCCAACGAAAAGCCCAAAGACGAGCCCAAACCCGTGGTCCCGGTAATGGATTTCATCCATGCAATGCAGGCCCATAACTCCAGTAATGCTACCTACATTGTTGATCCATTCTATTCTAGATACAATGGTTATTACAGAAGCGTGGAAGAAGATCCAAATGGTTGTGTTATTTGTTAA

Protein sequence

MQKLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRYYHTEIVSVGPAKEPEKPNEKPKDEPKPVVPVMDFIHAMQAHNSSNATYIVDPFYSRYNGYYRSVEEDPNGCVIC
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo04379.1Spo04379.1mRNA


Homology
[Close]
BLAST of Spo04379.1 vs. NCBI nr
Match: gi|902217606|gb|KNA17795.1| (hypothetical protein SOVF_076920 [Spinacia oleracea])

HSP 1 Score: 270.4 bits (690), Expect = 1.700e-69
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 1 

		  

Query: 1   MQKLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60
           MQKLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY
Sbjct: 1   MQKLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60

Query: 61  YHTEIVSVGPAKEPEKPNEKPKDEPKPVVPVMDFIHAMQAHNSSNATYIVDPFYSRYNGY 120
           YHTEIVSVGPAKEPEKPNEKPKDEPKPVVPVMDFIHAMQAHNSSNATYIVDPFYSRYNGY
Sbjct: 61  YHTEIVSVGPAKEPEKPNEKPKDEPKPVVPVMDFIHAMQAHNSSNATYIVDPFYSRYNGY 120

Query: 121 YRSVEEDPNGCVIC 135
           YRSVEEDPNGCVIC
Sbjct: 121 YRSVEEDPNGCVIC 134
[Close]
BLAST of Spo04379.1 vs. NCBI nr
Match: gi|902217605|gb|KNA17794.1| (hypothetical protein SOVF_076910 [Spinacia oleracea])

HSP 1 Score: 260.0 bits (663), Expect = 2.300e-66
Identity = 129/133 (96.99%), Postives = 131/133 (98.50%), Query Frame = 1 

		  

Query: 1   MQKLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60
           MQKLIVKL+IHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY
Sbjct: 1   MQKLIVKLDIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60

Query: 61  YHTEIVSVGPAKEPEKPNEKPKDEPKPVVPVMDFIHAMQAHNSSNATYIVDPFYSRYNGY 120
           YHTEIVSVGPAKEPEKP EKPKDEPKP+VPVMDFIHAMQAHNSSNATYIVDP YSRYNGY
Sbjct: 61  YHTEIVSVGPAKEPEKPKEKPKDEPKPIVPVMDFIHAMQAHNSSNATYIVDPCYSRYNGY 120

Query: 121 YRSVEEDPNGCVI 134
           YRSVEEDPNGCVI
Sbjct: 121 YRSVEEDPNGCVI 133
[Close]
BLAST of Spo04379.1 vs. NCBI nr
Match: gi|870865102|gb|KMT16169.1| (hypothetical protein BVRB_3g053300 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 146.0 bits (367), Expect = 4.800e-32
Identity = 80/134 (59.70%), Postives = 104/134 (77.61%), Query Frame = 1 

		  

Query: 1   MQKLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60
           M+K+++KL++HD+LSCK+ A+KLVSS+ G+DSIS+D K ++LTVIGD+DPVAVVKKL++ 
Sbjct: 1   MKKVVLKLDMHDNLSCKKTALKLVSSVPGLDSISVDMKVQQLTVIGDVDPVAVVKKLKKN 60

Query: 61  YHTEIVSVGPAKEPEKPNEKPKDEPKPVVPVMDFIHAMQAHNSSNATYIVDPFYSRYNGY 120
           ++ E+VSVGPAKEPEKP  KP  EP PVV V D++H   AHN S   Y    +Y   NGY
Sbjct: 61  FYVELVSVGPAKEPEKP--KPA-EPIPVVQVNDYVH---AHNYSYG-YNHPNYYVYSNGY 120

Query: 121 YRSVEEDPNGCVIC 135
            R VEE+PN CVIC
Sbjct: 121 VRCVEENPNACVIC 127
[Close]
BLAST of Spo04379.1 vs. NCBI nr
Match: gi|731321939|ref|XP_010671618.1| (PREDICTED: uncharacterized protein LOC104888367 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 144.1 bits (362), Expect = 1.800e-31
Identity = 76/134 (56.72%), Postives = 98/134 (73.13%), Query Frame = 1 

		  

Query: 1   MQKLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60
           MQK+++KL++HD+LSCK+ A+KLVSS+ G+DSIS+D KE+KLTVIGDMDP+AVVKKLR+ 
Sbjct: 1   MQKVVLKLDMHDNLSCKKTALKLVSSVPGLDSISVDMKEQKLTVIGDMDPMAVVKKLRKN 60

Query: 61  YHTEIVSVGPAKEPEKPNEKPKDEPKPVVPVMDFIHAMQAHNSSNATYIVDPFYSRYNGY 120
           ++TE+VSVGPAKEPEKP             V DF++ MQA+N S            YN  
Sbjct: 61  FYTELVSVGPAKEPEKPKS-----------VADFVNTMQAYNYSYG----------YNPP 113

Query: 121 YRSVEEDPNGCVIC 135
           Y  VE++PNGCVIC
Sbjct: 121 YYYVEQNPNGCVIC 113
[Close]
BLAST of Spo04379.1 vs. NCBI nr
Match: gi|731321941|ref|XP_010671619.1| (PREDICTED: uncharacterized protein LOC104888368 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 133.7 bits (335), Expect = 2.500e-28
Identity = 71/118 (60.17%), Postives = 90/118 (76.27%), Query Frame = 1 

		  

Query: 1   MQKLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60
           MQK+++KL++HDD +CK+KA+KLVSS++G+DSISMD KEKKLTVIGDMDPVAVV KLR+ 
Sbjct: 1   MQKVVLKLDVHDDKNCKKKALKLVSSVTGLDSISMDMKEKKLTVIGDMDPVAVVTKLRKI 60

Query: 61  YHTEIVSVGPAKEPEKPNEKPKDEPKPVVPVMDFIHAMQAHNSSNATYIVDPFYSRYN 119
           Y+TEIVSVGPAK+PEKP E   +EPK        IH M+ +NS        P+Y  Y+
Sbjct: 61  YNTEIVSVGPAKDPEKPKE--PEEPKKTEDPTPVIHVMRTYNSC----YNPPYYYSYH 112
[Close]
BLAST of Spo04379.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RE63_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_076920 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 1.200e-69
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 1 

		  

Query: 1   MQKLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60
           MQKLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY
Sbjct: 1   MQKLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60

Query: 61  YHTEIVSVGPAKEPEKPNEKPKDEPKPVVPVMDFIHAMQAHNSSNATYIVDPFYSRYNGY 120
           YHTEIVSVGPAKEPEKPNEKPKDEPKPVVPVMDFIHAMQAHNSSNATYIVDPFYSRYNGY
Sbjct: 61  YHTEIVSVGPAKEPEKPNEKPKDEPKPVVPVMDFIHAMQAHNSSNATYIVDPFYSRYNGY 120

Query: 121 YRSVEEDPNGCVIC 135
           YRSVEEDPNGCVIC
Sbjct: 121 YRSVEEDPNGCVIC 134
[Close]
BLAST of Spo04379.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RFP2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_076910 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 1.600e-66
Identity = 129/133 (96.99%), Postives = 131/133 (98.50%), Query Frame = 1 

		  

Query: 1   MQKLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60
           MQKLIVKL+IHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY
Sbjct: 1   MQKLIVKLDIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60

Query: 61  YHTEIVSVGPAKEPEKPNEKPKDEPKPVVPVMDFIHAMQAHNSSNATYIVDPFYSRYNGY 120
           YHTEIVSVGPAKEPEKP EKPKDEPKP+VPVMDFIHAMQAHNSSNATYIVDP YSRYNGY
Sbjct: 61  YHTEIVSVGPAKEPEKPKEKPKDEPKPIVPVMDFIHAMQAHNSSNATYIVDPCYSRYNGY 120

Query: 121 YRSVEEDPNGCVI 134
           YRSVEEDPNGCVI
Sbjct: 121 YRSVEEDPNGCVI 133
[Close]
BLAST of Spo04379.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CVQ4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g053300 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 3.400e-32
Identity = 80/134 (59.70%), Postives = 104/134 (77.61%), Query Frame = 1 

		  

Query: 1   MQKLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60
           M+K+++KL++HD+LSCK+ A+KLVSS+ G+DSIS+D K ++LTVIGD+DPVAVVKKL++ 
Sbjct: 1   MKKVVLKLDMHDNLSCKKTALKLVSSVPGLDSISVDMKVQQLTVIGDVDPVAVVKKLKKN 60

Query: 61  YHTEIVSVGPAKEPEKPNEKPKDEPKPVVPVMDFIHAMQAHNSSNATYIVDPFYSRYNGY 120
           ++ E+VSVGPAKEPEKP  KP  EP PVV V D++H   AHN S   Y    +Y   NGY
Sbjct: 61  FYVELVSVGPAKEPEKP--KPA-EPIPVVQVNDYVH---AHNYSYG-YNHPNYYVYSNGY 120

Query: 121 YRSVEEDPNGCVIC 135
            R VEE+PN CVIC
Sbjct: 121 VRCVEENPNACVIC 127
[Close]
BLAST of Spo04379.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CQX9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g053310 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.300e-31
Identity = 76/134 (56.72%), Postives = 98/134 (73.13%), Query Frame = 1 

		  

Query: 1   MQKLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60
           MQK+++KL++HD+LSCK+ A+KLVSS+ G+DSIS+D KE+KLTVIGDMDP+AVVKKLR+ 
Sbjct: 1   MQKVVLKLDMHDNLSCKKTALKLVSSVPGLDSISVDMKEQKLTVIGDMDPMAVVKKLRKN 60

Query: 61  YHTEIVSVGPAKEPEKPNEKPKDEPKPVVPVMDFIHAMQAHNSSNATYIVDPFYSRYNGY 120
           ++TE+VSVGPAKEPEKP             V DF++ MQA+N S            YN  
Sbjct: 61  FYTELVSVGPAKEPEKPKS-----------VADFVNTMQAYNYSYG----------YNPP 113

Query: 121 YRSVEEDPNGCVIC 135
           Y  VE++PNGCVIC
Sbjct: 121 YYYVEQNPNGCVIC 113
[Close]
BLAST of Spo04379.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FJU5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g053320 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.200e-28
Identity = 68/103 (66.02%), Postives = 85/103 (82.52%), Query Frame = 1 

		  

Query: 1   MQKLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60
           MQK+++KL++HDD +CK+KA+KLVSS++G+DSISMD KEKKLTVIGDMDPVAVV KLR+ 
Sbjct: 1   MQKVVLKLDVHDDKNCKKKALKLVSSVTGLDSISMDMKEKKLTVIGDMDPVAVVTKLRKI 60

Query: 61  YHTEIVSVGPAKEPEKPNEKPKDEPKPVVPVMDFIHAMQAHNS 104
           Y+TEIVSVGPAK+PEKP E   +EPK        IH M+ +NS
Sbjct: 61  YNTEIVSVGPAKDPEKPKE--PEEPKKTEDPTPVIHVMRTYNS 101
[Close]
BLAST of Spo04379.1 vs. TAIR (Arabidopsis)
Match: AT1G01490.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 96.7 bits (239), Expect = 1.200e-20
Identity = 55/87 (63.22%), Postives = 72/87 (82.76%), Query Frame = 1 

		  

Query: 1  MQKLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60
          M+K+++KL++HDD + KQKA+K VS++ GIDSI+MD KEKKLTVIG +DPV VV KLR+Y
Sbjct: 1  MKKIVLKLDLHDDRA-KQKALKTVSTLPGIDSIAMDMKEKKLTVIGTVDPVNVVSKLRKY 60

Query: 61 Y-HTEIVSVGPAKEPEKPNEKPKDEPK 87
          +  T+IV VGPAKEPEK   + K+EPK
Sbjct: 61 WPMTDIVLVGPAKEPEK---EKKEEPK 83
[Close]
BLAST of Spo04379.1 vs. TAIR (Arabidopsis)
Match: AT5G52740.1 (Copper transport protein family)

HSP 1 Score: 86.7 bits (213), Expect = 1.200e-17
Identity = 54/132 (40.91%), Postives = 79/132 (59.85%), Query Frame = 1 

		  

Query: 1   MQKLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60
           MQ +++KL++H + + KQKA+  V  +SG++S+ +  K+ KLTV G++D   +VKKL++ 
Sbjct: 1   MQVVVLKLDVHCEKT-KQKAMSTVCCLSGVNSVEV--KDGKLTVTGEIDAYMIVKKLKKI 60

Query: 61  YHTEIVSVGPAKEPEKPNEKPKDEPKPVVPVMDFIHAMQAHNSSNATYIVDPFYSRYNGY 120
            HTE +SVGP KEPEK  +KP D  KP     D I+        +      P+Y  +NG 
Sbjct: 61  CHTEFISVGPVKEPEK--KKPDDPKKPETKPPDVIY--------HYVPPCPPYYHNFNGC 116

Query: 121 YRSVEEDPNGCV 133
           Y    EDPN CV
Sbjct: 121 Y---NEDPNACV 116
[Close]
BLAST of Spo04379.1 vs. TAIR (Arabidopsis)
Match: AT5G23760.1 (Copper transport protein family)

HSP 1 Score: 73.6 bits (179), Expect = 1.100e-13
Identity = 43/85 (50.59%), Postives = 61/85 (71.76%), Query Frame = 1 

		  

Query: 2  QKLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRYY 61
          QK+++K+    D   KQKAI+  + I G+DSI+ D K++KLTVIG MD VAVVKKL++  
Sbjct: 3  QKVVLKVLTMTDDKTKQKAIEAAADIFGVDSIAADMKDQKLTVIGLMDAVAVVKKLKKVG 62

Query: 62 HTEIVSVGPAKEPEKPNEKPKDEPK 87
            +++SVGPAKE +K  E+ K+E K
Sbjct: 63 KVDLISVGPAKEEKK--EEKKEEKK 85
[Close]
BLAST of Spo04379.1 vs. TAIR (Arabidopsis)
Match: AT5G52750.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 67.8 bits (164), Expect = 5.900e-12
Identity = 50/141 (35.46%), Postives = 73/141 (51.77%), Query Frame = 1 

		  

Query: 3   KLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRYYH 62
           K +++L IH++   ++KA   VS   G+ SI+MD K  K+TV+G++D   +V KLR+  +
Sbjct: 5   KAVLQLSIHEE-RIRKKAFVTVSRCPGVTSITMDDKTGKMTVVGEVDVPVIVMKLRKLCN 64

Query: 63  TEIVSVGPAKEPEKPNE-----KPKDEPKPVVPVMDFIHAMQAHNSSNATYIVDPFYSRY 122
           TE+VSV   K PEK  E      PK  P P  P       +Q +N     Y  +P Y+  
Sbjct: 65  TELVSVEVVKPPEKKPEPEKPAPPKPAPAPAKPAEIVAWPVQMNN----PYQYNPAYA-- 124

Query: 123 NGYYRSVEE-----DPNGCVI 134
           N YY+         D + CVI
Sbjct: 125 NSYYQPYGNSRFVTDESNCVI 138
[Close]
BLAST of Spo04379.1 vs. TAIR (Arabidopsis)
Match: AT5G52760.1 (Copper transport protein family)

HSP 1 Score: 63.5 bits (153), Expect = 1.100e-10
Identity = 50/135 (37.04%), Postives = 72/135 (53.33%), Query Frame = 1 

		  

Query: 5   IVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRYYHTE 64
           +++L IH++ + ++KA+  VS  SG+ SI+MD K  K+T++G++D  AVV KLR+  +TE
Sbjct: 7   VLQLSIHEERT-RKKALVTVSRFSGVTSITMD-KSGKMTIVGEVDVPAVVMKLRKLCNTE 66

Query: 65  IVSVGPAKEPEKPNEKPKDEPKPVVPVMDFIHAMQAHNSSNATYIVDPFYSRYNGYYRS- 124
           IVSV   K P K  E  K       PV             N  Y  +P Y+  N YY   
Sbjct: 67  IVSVDDVKPPVKKPEPEKPAESIAYPV-----------PMNYAYQFNPAYA--NSYYHQP 125

Query: 125 -----VEEDPNGCVI 134
                V ++PN CVI
Sbjct: 127 YGNCRVVDEPN-CVI 125
The following BLAST results are available for this feature:
BLAST of Spo04379.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902217606|gb|KNA17795.1|1.7e-69100.hypothetical protein SOVF_0769... [more]
gi|902217605|gb|KNA17794.1|2.3e-6696.9hypothetical protein SOVF_0769... [more]
gi|870865102|gb|KMT16169.1|4.8e-3259.7hypothetical protein BVRB_3g05... [more]
gi|731321939|ref|XP_010671618.1|1.8e-3156.7PREDICTED: uncharacterized pro... [more]
gi|731321941|ref|XP_010671619.1|2.5e-2860.1PREDICTED: uncharacterized pro... [more]
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BLAST of Spo04379.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RE63_SPIOL1.2e-69100.Uncharacterized protein OS=Spi... [more]
A0A0K9RFP2_SPIOL1.6e-6696.9Uncharacterized protein OS=Spi... [more]
A0A0J8CVQ4_BETVU3.4e-3259.7Uncharacterized protein OS=Bet... [more]
A0A0J8CQX9_BETVU1.3e-3156.7Uncharacterized protein OS=Bet... [more]
A0A0J8FJU5_BETVU2.2e-2866.0Uncharacterized protein OS=Bet... [more]
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BLAST of Spo04379.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo04379.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT1G01490.11.2e-2063.2Heavy metal transport/detoxifi... [more]
AT5G52740.11.2e-1740.9Copper transport protein famil... [more]
AT5G23760.11.1e-1350.5Copper transport protein famil... [more]
AT5G52750.15.9e-1235.4Heavy metal transport/detoxifi... [more]
AT5G52760.11.1e-1037.0Copper transport protein famil... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006121Heavy metal-associated domain, HMAPFAMPF00403HMAcoord: 15..58
score: 2.
IPR006121Heavy metal-associated domain, HMAunknownSSF55008HMA, heavy metal-associated domaincoord: 15..60
score: 2.0
NoneNo IPR availableGENE3D3.30.70.100coord: 15..62
score: 6.
NoneNo IPR availablePANTHERPTHR22814COPPER TRANSPORT PROTEIN ATOX1-RELATEDcoord: 1..133
score: 8.6
NoneNo IPR availablePANTHERPTHR22814:SF77HEAVY-METAL-ASSOCIATED DOMAIN-CONTAINING PROTEINcoord: 1..133
score: 8.6

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030001 metal ion transport
biological_process GO:0098542 defense response to other organism
biological_process GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway
biological_process GO:0007178 transmembrane receptor protein serine/threonine kinase signaling pathway
biological_process GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway
biological_process GO:0008152 metabolic process
biological_process GO:0010046 response to mycotoxin
biological_process GO:0006464 cellular protein modification process
biological_process GO:0071229 cellular response to acid chemical
biological_process GO:1901701 cellular response to oxygen-containing compound
biological_process GO:0033554 cellular response to stress
biological_process GO:0009755 hormone-mediated signaling pathway
biological_process GO:0009697 salicylic acid biosynthetic process
biological_process GO:0045087 innate immune response
biological_process GO:0035556 intracellular signal transduction
biological_process GO:0048519 negative regulation of biological process
biological_process GO:0016310 phosphorylation
biological_process GO:0031347 regulation of defense response
biological_process GO:0043067 regulation of programmed cell death
biological_process GO:0009651 response to salt stress
biological_process GO:0006468 protein phosphorylation
biological_process GO:0006073 cellular glucan metabolic process
biological_process GO:0071555 cell wall organization
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:2000030 regulation of response to red or far red light
biological_process GO:0010224 response to UV-B
biological_process GO:0010310 regulation of hydrogen peroxide metabolic process
biological_process GO:0009738 abscisic acid-activated signaling pathway
biological_process GO:0000169 activation of MAPK activity involved in osmosensory signaling pathway
biological_process GO:0010120 camalexin biosynthetic process
biological_process GO:0042742 defense response to bacterium
biological_process GO:0050832 defense response to fungus
biological_process GO:0009595 detection of biotic stimulus
biological_process GO:0010229 inflorescence development
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0001666 response to hypoxia
biological_process GO:0043069 negative regulation of programmed cell death
biological_process GO:0019684 photosynthesis, light reaction
biological_process GO:0048481 plant ovule development
biological_process GO:0080136 priming of cellular response to stress
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0031348 negative regulation of defense response
biological_process GO:0043900 regulation of multi-organism process
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0009409 response to cold
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:2000038 regulation of stomatal complex development
biological_process GO:2000037 regulation of stomatal complex patterning
biological_process GO:0010363 regulation of plant-type hypersensitive response
cellular_component GO:0005886 plasma membrane
cellular_component GO:0000785 chromatin
cellular_component GO:0005634 nucleus
cellular_component GO:0005737 cytoplasm
cellular_component GO:0016020 membrane
cellular_component GO:0005618 cell wall
cellular_component GO:0048046 apoplast
molecular_function GO:0016874 ligase activity
molecular_function GO:0003682 chromatin binding
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0016762 xyloglucan:xyloglucosyl transferase activity
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function GO:0046872 metal ion binding
molecular_function GO:0019899 enzyme binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0030247 polysaccharide binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0016773 phosphotransferase activity, alcohol group as acceptor
molecular_function GO:0016301 kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004707 MAP kinase activity
molecular_function GO:0003677 DNA binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo217850.81Barchart | Table
Spo238520.80Barchart | Table
Spo248180.79Barchart | Table
Spo142940.78Barchart | Table
Spo203800.78Barchart | Table
Spo142950.78Barchart | Table
Spo249400.77Barchart | Table
Spo007820.76Barchart | Table
Spo058140.76Barchart | Table
Spo271650.76Barchart | Table
Spo149020.75Barchart | Table
Spo189660.75Barchart | Table
Spo087690.75Barchart | Table
Spo198880.74Barchart | Table
Spo006110.74Barchart | Table
Spo234900.73Barchart | Table
Spo011370.73Barchart | Table
Spo012910.73Barchart | Table
Spo096350.73Barchart | Table
Spo215250.73Barchart | Table
Spo220330.73Barchart | Table
Spo185890.72Barchart | Table
Spo070770.72Barchart | Table
Spo032030.72Barchart | Table
Spo117760.71Barchart | Table
Spo058120.71Barchart | Table
Spo054640.71Barchart | Table
Spo085880.70Barchart | Table
Spo268990.70Barchart | Table
Spo154470.70Barchart | Table
Spo205620.70Barchart | Table
Spo093330.70Barchart | Table
Spo057810.70Barchart | Table
Spo223960.69Barchart | Table
Spo238420.69Barchart | Table
Spo013520.69Barchart | Table
Spo031070.69Barchart | Table
Spo215090.69Barchart | Table
Spo119750.69Barchart | Table
Spo221170.68Barchart | Table
Spo058170.68Barchart | Table
Spo012260.68Barchart | Table
Spo253500.68Barchart | Table
Spo178800.68Barchart | Table
Spo248080.68Barchart | Table
Spo012760.68Barchart | Table
Spo071810.68Barchart | Table
Spo213620.68Barchart | Table
Spo115120.68Barchart | Table
Spo266780.67Barchart | Table
Spo076460.67Barchart | Table
Spo084190.67Barchart | Table
Spo088550.67Barchart | Table
Spo093340.67Barchart | Table
Spo096360.67Barchart | Table
Spo111500.67Barchart | Table
Spo121450.67Barchart | Table
Spo123760.67Barchart | Table
Spo134780.67Barchart | Table
Spo168280.67Barchart | Table
Spo177250.67Barchart | Table
Spo020910.67Barchart | Table
Spo016860.67Barchart | Table
Spo207880.67Barchart | Table
Spo223630.67Barchart | Table
Spo054960.67Barchart | Table
Spo050470.66Barchart | Table
Spo077840.66Barchart | Table
Spo128840.66Barchart | Table
Spo237700.66Barchart | Table
Spo123280.66Barchart | Table
Spo058130.66Barchart | Table
Spo091520.66Barchart | Table
Spo012560.66Barchart | Table
Spo166480.66Barchart | Table
Spo198680.66Barchart | Table
Spo158660.66Barchart | Table
Spo071320.66Barchart | Table
Spo157500.66Barchart | Table
Spo146670.66Barchart | Table
Spo007480.66Barchart | Table
Spo042010.66Barchart | Table
Spo221640.66Barchart | Table
Spo205240.65Barchart | Table
Spo159470.65Barchart | Table
Spo207290.65Barchart | Table
Spo085940.65Barchart | Table
Spo198700.65Barchart | Table
Spo031840.65Barchart | Table
Spo242840.65Barchart | Table
Spo016290.65Barchart | Table
Spo123690.65Barchart | Table