Spo04379 (gene) | SpinachBase

Overview


Name	Spo04379
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Heavy metal transport/detoxification superfamily protein
Location	chr3 : 2632041 .. 2634151 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTCACATAAATAGACTCACCTTATAGAGTATTATATCCCATTCCTTCTTACTTCACTACCTTCTTCTATTATTCTCTCTCCTCTAAACACAAATTCCACAAATCTCTAATCAAGAAAAGGAAAAAAGATCACTGAAAATGCAGGTTAGATCTCTTACCTTTCAACATTTCTCTCTATTTTATATGTTTGTTATTCCTTAATTAATATAATGTTTAGGGATAATTATTGTGGTTAGAGGATCGTATGATGAATTAATGATAGTTTTTCTATTCCCTTCAAGTAGAATGTCTTAGCTAGAATATTACCACTCACATTTCTGTAGCATGTTGGTGATGGGTTACTCACACGTAATTTGTCGCTAGACCTGATCAACTATACCCCAATCTGGTGGCCTGATTCGACCCGACTCGATCTGGAAAAGTCCATTTTGGCCCGAAAACCCGTATTAAATTTACGGGTTTGGGTATGAGTTTTTGTGTTAACGCCCTTCTGGCCTGAATTTTGATCAACTCTAACTGTCGCACATTAGATGAAGAAGAGAGAAAATATCAACTTATAAGTTTGAGAAATCACTCCTACAGTTCTAGTATACACCTATACACAGACACAATTGATTTTCATTTAGGATTTTAAGTGATTTCTAACTCTGCTCCTCCTTATTGGATTACTCGTGCTATATTCTATTCAATCAAATTTAACGGGGGTTTCTTATTCAAATACTAATGATTTTCCTACTTTGTTGGTTTTGTTCAGAAATTGATAGTGAAATTGGAAATCCACGATGATTTGAGCTGCAAGCAAAAGGCTATAAAACTGGTCTCTTCTATTTCTGGTAATTCCATGTCCCAAACTATCTTTTTCTTTTCAAATATAACTATCTCTGTTTAATACTCCCTCCGTCTTTTTTTGTTTTTTACGTATCGTATTTTGCACGCGTTTTAACGACTAATTAATGTGCATTGAGATTCTTCTAAGTTTTTCATGTAAACGAGGAAAATTACGTTTATTTATAATGTTTTCACTCTTATCAAAGTTCTGATATGGGGAAAATGAGAAAAAGTTAATGTCTTTATGGAAAAGTGTGAGTGACTAAATTACTCAATTGATTTAATTGGTTAATATAATAATTGGGTTCAAATTTTGATAGAATATTAAATCATTTATGTGATAATATAAAAGGAAATGTAAAGAACATTTTGAAACACCAAAAAAGGAAACGTAAAAAACAAAAAGAGACGGAGGGAGTACAAGTTATTGTAATAGACTGTTTAACGAAACTGTCAGATCCCATGTCATATCACCAATCTCCTTATACATTTGACATACTATTAAGCATACTATGCCATTTAATTAAGTGTAAGACAGTCCCATATGGAACTAGATTTTTTTTAGTTTTAATTTTTTTTTATATAATTGAATTTTAATAATTGTGGTTCAAAATTTTGCAGGGATTGATTCTATCTCAATGGACGGAAAGGAAAAGAAATTGACAGTAATAGGAGACATGGATCCTGTGGCAGTGGTGAAGAAATTAAGAAGGTACTACCATACTGAAATTGTCTCAGTTGGGCCTGCAAAAGAGCCTGAGAAGCCCAACGAAAAGCCCAAAGACGAGCCCAAACCCGTGGTCCCGGTAATGGATTTCATCCATGCAATGCAGGCCCATAACTCCAGTAATGCTACCTACATTGTTGATCCATTCTATTCTAGATACAATGGTTATTACAGAAGCGTGGAAGAAGATCCAAATGGTTGTGTTATTTGTTAACTAATCCTTTAAACTTAATATTTTTTTATTATTAATGGATAAGTTAAATTGTTAAGCTTGTTTAAGCAAGAGTAATAGAATGAGTGACCTTCTAGAAAGTTCTTGTATGACGCCACTTAAAGTGAACTTGTCTACTTTATGTTTAGAGTTTAGCTCATAATTAAGTTGTGATTAGAGAGTAGGATTGAACTGTAAAGTTCTCCATTTTTTACATTTGTGCCAATTATTGTATTGATTTGTTACTAGATTAAATCAATAAACGCCGTACTTACAAACTTTATATCCGTCAAAGTGAATGTTCTTTTTTTTTTTTTTTTTACAACGGACCCAACTTATTGTAG

mRNA sequence

TTCTCACATAAATAGACTCACCTTATAGAGTATTATATCCCATTCCTTCTTACTTCACTACCTTCTTCTATTATTCTCTCTCCTCTAAACACAAATTCCACAAATCTCTAATCAAGAAAAGGAAAAAAGATCACTGAAAATGCAGAAATTGATAGTGAAATTGGAAATCCACGATGATTTGAGCTGCAAGCAAAAGGCTATAAAACTGGTCTCTTCTATTTCTGGGATTGATTCTATCTCAATGGACGGAAAGGAAAAGAAATTGACAGTAATAGGAGACATGGATCCTGTGGCAGTGGTGAAGAAATTAAGAAGGTACTACCATACTGAAATTGTCTCAGTTGGGCCTGCAAAAGAGCCTGAGAAGCCCAACGAAAAGCCCAAAGACGAGCCCAAACCCGTGGTCCCGGTAATGGATTTCATCCATGCAATGCAGGCCCATAACTCCAGTAATGCTACCTACATTGTTGATCCATTCTATTCTAGATACAATGGTTATTACAGAAGCGTGGAAGAAGATCCAAATGGTTGTGTTATTTGTTAACTAATCCTTTAAACTTAATATTTTTTTATTATTAATGGATAAGTTAAATTGTTAAGCTTGTTTAAGCAAGAGTAATAGAATGAGTGACCTTCTAGAAAGTTCTTGTATGACGCCACTTAAAGTGAACTTGTCTACTTTATGTTTAGAGTTTAGCTCATAATTAAGTTGTGATTAGAGAGTAGGATTGAACTGTAAAGTTCTCCATTTTTTACATTTGTGCCAATTATTGTATTGATTTGTTACTAGATTAAATCAATAAACGCCGTACTTACAAACTTTATATCCGTCAAAGTGAATGTTCTTTTTTTTTTTTTTTTTACAACGGACCCAACTTATTGTAG

Coding sequence (CDS)

ATGCAGAAATTGATAGTGAAATTGGAAATCCACGATGATTTGAGCTGCAAGCAAAAGGCTATAAAACTGGTCTCTTCTATTTCTGGGATTGATTCTATCTCAATGGACGGAAAGGAAAAGAAATTGACAGTAATAGGAGACATGGATCCTGTGGCAGTGGTGAAGAAATTAAGAAGGTACTACCATACTGAAATTGTCTCAGTTGGGCCTGCAAAAGAGCCTGAGAAGCCCAACGAAAAGCCCAAAGACGAGCCCAAACCCGTGGTCCCGGTAATGGATTTCATCCATGCAATGCAGGCCCATAACTCCAGTAATGCTACCTACATTGTTGATCCATTCTATTCTAGATACAATGGTTATTACAGAAGCGTGGAAGAAGATCCAAATGGTTGTGTTATTTGTTAA

Protein sequence

MQKLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRYYHTEIVSVGPAKEPEKPNEKPKDEPKPVVPVMDFIHAMQAHNSSNATYIVDPFYSRYNGYYRSVEEDPNGCVIC

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo04379.1	Spo04379.1	mRNA

Homology

[Close]

BLAST of Spo04379.1 vs. NCBI nr
Match: gi|902217606|gb|KNA17795.1| (hypothetical protein SOVF_076920 [Spinacia oleracea])

HSP 1 Score: 270.4 bits (690), Expect = 1.700e-69
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 1

		  
Query: 1   MQKLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60
           MQKLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY
Sbjct: 1   MQKLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60

Query: 61  YHTEIVSVGPAKEPEKPNEKPKDEPKPVVPVMDFIHAMQAHNSSNATYIVDPFYSRYNGY 120
           YHTEIVSVGPAKEPEKPNEKPKDEPKPVVPVMDFIHAMQAHNSSNATYIVDPFYSRYNGY
Sbjct: 61  YHTEIVSVGPAKEPEKPNEKPKDEPKPVVPVMDFIHAMQAHNSSNATYIVDPFYSRYNGY 120

Query: 121 YRSVEEDPNGCVIC 135
           YRSVEEDPNGCVIC
Sbjct: 121 YRSVEEDPNGCVIC 134

[Close]

BLAST of Spo04379.1 vs. NCBI nr
Match: gi|902217605|gb|KNA17794.1| (hypothetical protein SOVF_076910 [Spinacia oleracea])

HSP 1 Score: 260.0 bits (663), Expect = 2.300e-66
Identity = 129/133 (96.99%), Postives = 131/133 (98.50%), Query Frame = 1

		  
Query: 1   MQKLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60
           MQKLIVKL+IHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY
Sbjct: 1   MQKLIVKLDIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60

Query: 61  YHTEIVSVGPAKEPEKPNEKPKDEPKPVVPVMDFIHAMQAHNSSNATYIVDPFYSRYNGY 120
           YHTEIVSVGPAKEPEKP EKPKDEPKP+VPVMDFIHAMQAHNSSNATYIVDP YSRYNGY
Sbjct: 61  YHTEIVSVGPAKEPEKPKEKPKDEPKPIVPVMDFIHAMQAHNSSNATYIVDPCYSRYNGY 120

Query: 121 YRSVEEDPNGCVI 134
           YRSVEEDPNGCVI
Sbjct: 121 YRSVEEDPNGCVI 133

[Close]

BLAST of Spo04379.1 vs. NCBI nr
Match: gi|870865102|gb|KMT16169.1| (hypothetical protein BVRB_3g053300 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 146.0 bits (367), Expect = 4.800e-32
Identity = 80/134 (59.70%), Postives = 104/134 (77.61%), Query Frame = 1

		  
Query: 1   MQKLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60
           M+K+++KL++HD+LSCK+ A+KLVSS+ G+DSIS+D K ++LTVIGD+DPVAVVKKL++ 
Sbjct: 1   MKKVVLKLDMHDNLSCKKTALKLVSSVPGLDSISVDMKVQQLTVIGDVDPVAVVKKLKKN 60

Query: 61  YHTEIVSVGPAKEPEKPNEKPKDEPKPVVPVMDFIHAMQAHNSSNATYIVDPFYSRYNGY 120
           ++ E+VSVGPAKEPEKP  KP  EP PVV V D++H   AHN S   Y    +Y   NGY
Sbjct: 61  FYVELVSVGPAKEPEKP--KPA-EPIPVVQVNDYVH---AHNYSYG-YNHPNYYVYSNGY 120

Query: 121 YRSVEEDPNGCVIC 135
            R VEE+PN CVIC
Sbjct: 121 VRCVEENPNACVIC 127

[Close]

BLAST of Spo04379.1 vs. NCBI nr
Match: gi|731321939|ref|XP_010671618.1| (PREDICTED: uncharacterized protein LOC104888367 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 144.1 bits (362), Expect = 1.800e-31
Identity = 76/134 (56.72%), Postives = 98/134 (73.13%), Query Frame = 1

		  
Query: 1   MQKLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60
           MQK+++KL++HD+LSCK+ A+KLVSS+ G+DSIS+D KE+KLTVIGDMDP+AVVKKLR+ 
Sbjct: 1   MQKVVLKLDMHDNLSCKKTALKLVSSVPGLDSISVDMKEQKLTVIGDMDPMAVVKKLRKN 60

Query: 61  YHTEIVSVGPAKEPEKPNEKPKDEPKPVVPVMDFIHAMQAHNSSNATYIVDPFYSRYNGY 120
           ++TE+VSVGPAKEPEKP             V DF++ MQA+N S            YN  
Sbjct: 61  FYTELVSVGPAKEPEKPKS-----------VADFVNTMQAYNYSYG----------YNPP 113

Query: 121 YRSVEEDPNGCVIC 135
           Y  VE++PNGCVIC
Sbjct: 121 YYYVEQNPNGCVIC 113

[Close]

BLAST of Spo04379.1 vs. NCBI nr
Match: gi|731321941|ref|XP_010671619.1| (PREDICTED: uncharacterized protein LOC104888368 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 133.7 bits (335), Expect = 2.500e-28
Identity = 71/118 (60.17%), Postives = 90/118 (76.27%), Query Frame = 1

		  
Query: 1   MQKLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60
           MQK+++KL++HDD +CK+KA+KLVSS++G+DSISMD KEKKLTVIGDMDPVAVV KLR+ 
Sbjct: 1   MQKVVLKLDVHDDKNCKKKALKLVSSVTGLDSISMDMKEKKLTVIGDMDPVAVVTKLRKI 60

Query: 61  YHTEIVSVGPAKEPEKPNEKPKDEPKPVVPVMDFIHAMQAHNSSNATYIVDPFYSRYN 119
           Y+TEIVSVGPAK+PEKP E   +EPK        IH M+ +NS        P+Y  Y+
Sbjct: 61  YNTEIVSVGPAKDPEKPKE--PEEPKKTEDPTPVIHVMRTYNSC----YNPPYYYSYH 112

[Close]

BLAST of Spo04379.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RE63_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_076920 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 1.200e-69
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 1

		  
Query: 1   MQKLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60
           MQKLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY
Sbjct: 1   MQKLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60

Query: 61  YHTEIVSVGPAKEPEKPNEKPKDEPKPVVPVMDFIHAMQAHNSSNATYIVDPFYSRYNGY 120
           YHTEIVSVGPAKEPEKPNEKPKDEPKPVVPVMDFIHAMQAHNSSNATYIVDPFYSRYNGY
Sbjct: 61  YHTEIVSVGPAKEPEKPNEKPKDEPKPVVPVMDFIHAMQAHNSSNATYIVDPFYSRYNGY 120

Query: 121 YRSVEEDPNGCVIC 135
           YRSVEEDPNGCVIC
Sbjct: 121 YRSVEEDPNGCVIC 134

[Close]

BLAST of Spo04379.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RFP2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_076910 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 1.600e-66
Identity = 129/133 (96.99%), Postives = 131/133 (98.50%), Query Frame = 1

		  
Query: 1   MQKLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60
           MQKLIVKL+IHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY
Sbjct: 1   MQKLIVKLDIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60

Query: 61  YHTEIVSVGPAKEPEKPNEKPKDEPKPVVPVMDFIHAMQAHNSSNATYIVDPFYSRYNGY 120
           YHTEIVSVGPAKEPEKP EKPKDEPKP+VPVMDFIHAMQAHNSSNATYIVDP YSRYNGY
Sbjct: 61  YHTEIVSVGPAKEPEKPKEKPKDEPKPIVPVMDFIHAMQAHNSSNATYIVDPCYSRYNGY 120

Query: 121 YRSVEEDPNGCVI 134
           YRSVEEDPNGCVI
Sbjct: 121 YRSVEEDPNGCVI 133

[Close]

BLAST of Spo04379.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CVQ4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g053300 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 3.400e-32
Identity = 80/134 (59.70%), Postives = 104/134 (77.61%), Query Frame = 1

		  
Query: 1   MQKLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60
           M+K+++KL++HD+LSCK+ A+KLVSS+ G+DSIS+D K ++LTVIGD+DPVAVVKKL++ 
Sbjct: 1   MKKVVLKLDMHDNLSCKKTALKLVSSVPGLDSISVDMKVQQLTVIGDVDPVAVVKKLKKN 60

Query: 61  YHTEIVSVGPAKEPEKPNEKPKDEPKPVVPVMDFIHAMQAHNSSNATYIVDPFYSRYNGY 120
           ++ E+VSVGPAKEPEKP  KP  EP PVV V D++H   AHN S   Y    +Y   NGY
Sbjct: 61  FYVELVSVGPAKEPEKP--KPA-EPIPVVQVNDYVH---AHNYSYG-YNHPNYYVYSNGY 120

Query: 121 YRSVEEDPNGCVIC 135
            R VEE+PN CVIC
Sbjct: 121 VRCVEENPNACVIC 127

[Close]

BLAST of Spo04379.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CQX9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g053310 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.300e-31
Identity = 76/134 (56.72%), Postives = 98/134 (73.13%), Query Frame = 1

		  
Query: 1   MQKLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60
           MQK+++KL++HD+LSCK+ A+KLVSS+ G+DSIS+D KE+KLTVIGDMDP+AVVKKLR+ 
Sbjct: 1   MQKVVLKLDMHDNLSCKKTALKLVSSVPGLDSISVDMKEQKLTVIGDMDPMAVVKKLRKN 60

Query: 61  YHTEIVSVGPAKEPEKPNEKPKDEPKPVVPVMDFIHAMQAHNSSNATYIVDPFYSRYNGY 120
           ++TE+VSVGPAKEPEKP             V DF++ MQA+N S            YN  
Sbjct: 61  FYTELVSVGPAKEPEKPKS-----------VADFVNTMQAYNYSYG----------YNPP 113

Query: 121 YRSVEEDPNGCVIC 135
           Y  VE++PNGCVIC
Sbjct: 121 YYYVEQNPNGCVIC 113

[Close]

BLAST of Spo04379.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FJU5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g053320 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.200e-28
Identity = 68/103 (66.02%), Postives = 85/103 (82.52%), Query Frame = 1

		  
Query: 1   MQKLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60
           MQK+++KL++HDD +CK+KA+KLVSS++G+DSISMD KEKKLTVIGDMDPVAVV KLR+ 
Sbjct: 1   MQKVVLKLDVHDDKNCKKKALKLVSSVTGLDSISMDMKEKKLTVIGDMDPVAVVTKLRKI 60

Query: 61  YHTEIVSVGPAKEPEKPNEKPKDEPKPVVPVMDFIHAMQAHNS 104
           Y+TEIVSVGPAK+PEKP E   +EPK        IH M+ +NS
Sbjct: 61  YNTEIVSVGPAKDPEKPKE--PEEPKKTEDPTPVIHVMRTYNS 101

[Close]

BLAST of Spo04379.1 vs. TAIR (Arabidopsis)
Match: AT1G01490.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 96.7 bits (239), Expect = 1.200e-20
Identity = 55/87 (63.22%), Postives = 72/87 (82.76%), Query Frame = 1

		  
Query: 1  MQKLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60
          M+K+++KL++HDD + KQKA+K VS++ GIDSI+MD KEKKLTVIG +DPV VV KLR+Y
Sbjct: 1  MKKIVLKLDLHDDRA-KQKALKTVSTLPGIDSIAMDMKEKKLTVIGTVDPVNVVSKLRKY 60

Query: 61 Y-HTEIVSVGPAKEPEKPNEKPKDEPK 87
          +  T+IV VGPAKEPEK   + K+EPK
Sbjct: 61 WPMTDIVLVGPAKEPEK---EKKEEPK 83

[Close]

BLAST of Spo04379.1 vs. TAIR (Arabidopsis)
Match: AT5G52740.1 (Copper transport protein family)

HSP 1 Score: 86.7 bits (213), Expect = 1.200e-17
Identity = 54/132 (40.91%), Postives = 79/132 (59.85%), Query Frame = 1

		  
Query: 1   MQKLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60
           MQ +++KL++H + + KQKA+  V  +SG++S+ +  K+ KLTV G++D   +VKKL++ 
Sbjct: 1   MQVVVLKLDVHCEKT-KQKAMSTVCCLSGVNSVEV--KDGKLTVTGEIDAYMIVKKLKKI 60

Query: 61  YHTEIVSVGPAKEPEKPNEKPKDEPKPVVPVMDFIHAMQAHNSSNATYIVDPFYSRYNGY 120
            HTE +SVGP KEPEK  +KP D  KP     D I+        +      P+Y  +NG 
Sbjct: 61  CHTEFISVGPVKEPEK--KKPDDPKKPETKPPDVIY--------HYVPPCPPYYHNFNGC 116

Query: 121 YRSVEEDPNGCV 133
           Y    EDPN CV
Sbjct: 121 Y---NEDPNACV 116

[Close]

BLAST of Spo04379.1 vs. TAIR (Arabidopsis)
Match: AT5G23760.1 (Copper transport protein family)

HSP 1 Score: 73.6 bits (179), Expect = 1.100e-13
Identity = 43/85 (50.59%), Postives = 61/85 (71.76%), Query Frame = 1

		  
Query: 2  QKLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRYY 61
          QK+++K+    D   KQKAI+  + I G+DSI+ D K++KLTVIG MD VAVVKKL++  
Sbjct: 3  QKVVLKVLTMTDDKTKQKAIEAAADIFGVDSIAADMKDQKLTVIGLMDAVAVVKKLKKVG 62

Query: 62 HTEIVSVGPAKEPEKPNEKPKDEPK 87
            +++SVGPAKE +K  E+ K+E K
Sbjct: 63 KVDLISVGPAKEEKK--EEKKEEKK 85

[Close]

BLAST of Spo04379.1 vs. TAIR (Arabidopsis)
Match: AT5G52750.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 67.8 bits (164), Expect = 5.900e-12
Identity = 50/141 (35.46%), Postives = 73/141 (51.77%), Query Frame = 1

		  
Query: 3   KLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRYYH 62
           K +++L IH++   ++KA   VS   G+ SI+MD K  K+TV+G++D   +V KLR+  +
Sbjct: 5   KAVLQLSIHEE-RIRKKAFVTVSRCPGVTSITMDDKTGKMTVVGEVDVPVIVMKLRKLCN 64

Query: 63  TEIVSVGPAKEPEKPNE-----KPKDEPKPVVPVMDFIHAMQAHNSSNATYIVDPFYSRY 122
           TE+VSV   K PEK  E      PK  P P  P       +Q +N     Y  +P Y+  
Sbjct: 65  TELVSVEVVKPPEKKPEPEKPAPPKPAPAPAKPAEIVAWPVQMNN----PYQYNPAYA-- 124

Query: 123 NGYYRSVEE-----DPNGCVI 134
           N YY+         D + CVI
Sbjct: 125 NSYYQPYGNSRFVTDESNCVI 138

[Close]

BLAST of Spo04379.1 vs. TAIR (Arabidopsis)
Match: AT5G52760.1 (Copper transport protein family)

HSP 1 Score: 63.5 bits (153), Expect = 1.100e-10
Identity = 50/135 (37.04%), Postives = 72/135 (53.33%), Query Frame = 1

		  
Query: 5   IVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRYYHTE 64
           +++L IH++ + ++KA+  VS  SG+ SI+MD K  K+T++G++D  AVV KLR+  +TE
Sbjct: 7   VLQLSIHEERT-RKKALVTVSRFSGVTSITMD-KSGKMTIVGEVDVPAVVMKLRKLCNTE 66

Query: 65  IVSVGPAKEPEKPNEKPKDEPKPVVPVMDFIHAMQAHNSSNATYIVDPFYSRYNGYYRS- 124
           IVSV   K P K  E  K       PV             N  Y  +P Y+  N YY   
Sbjct: 67  IVSVDDVKPPVKKPEPEKPAESIAYPV-----------PMNYAYQFNPAYA--NSYYHQP 125

Query: 125 -----VEEDPNGCVI 134
                V ++PN CVI
Sbjct: 127 YGNCRVVDEPN-CVI 125

The following BLAST results are available for this feature:

BLAST of Spo04379.1 vs. NCBI nr
BLAST of Spo04379.1 vs. UniProtKB/TrEMBL
BLAST of Spo04379.1 vs. ExPASy Swiss-Prot
BLAST of Spo04379.1 vs. TAIR (Arabidopsis)

BLAST of Spo04379.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902217606\|gb\|KNA17795.1\|	1.7e-69	100.	hypothetical protein SOVF_0769...	[more]
gi\|902217605\|gb\|KNA17794.1\|	2.3e-66	96.9	hypothetical protein SOVF_0769...	[more]
gi\|870865102\|gb\|KMT16169.1\|	4.8e-32	59.7	hypothetical protein BVRB_3g05...	[more]
gi\|731321939\|ref\|XP_010671618.1\|	1.8e-31	56.7	PREDICTED: uncharacterized pro...	[more]
gi\|731321941\|ref\|XP_010671619.1\|	2.5e-28	60.1	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo04379.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9RE63_SPIOL	1.2e-69	100.	Uncharacterized protein OS=Spi...	[more]
A0A0K9RFP2_SPIOL	1.6e-66	96.9	Uncharacterized protein OS=Spi...	[more]
A0A0J8CVQ4_BETVU	3.4e-32	59.7	Uncharacterized protein OS=Bet...	[more]
A0A0J8CQX9_BETVU	1.3e-31	56.7	Uncharacterized protein OS=Bet...	[more]
A0A0J8FJU5_BETVU	2.2e-28	66.0	Uncharacterized protein OS=Bet...	[more]

BLAST of Spo04379.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

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Match Name	E-value	Identity	Description

BLAST of Spo04379.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
AT1G01490.1	1.2e-20	63.2	Heavy metal transport/detoxifi...	[more]
AT5G52740.1	1.2e-17	40.9	Copper transport protein famil...	[more]
AT5G23760.1	1.1e-13	50.5	Copper transport protein famil...	[more]
AT5G52750.1	5.9e-12	35.4	Heavy metal transport/detoxifi...	[more]
AT5G52760.1	1.1e-10	37.0	Copper transport protein famil...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 15..58 score: 2.
IPR006121	Heavy metal-associated domain, HMA	unknown	SSF55008	HMA, heavy metal-associated domain	coord: 15..60 score: 2.0
None	No IPR available	GENE3D	3.30.70.100		coord: 15..62 score: 6.
None	No IPR available	PANTHER	PTHR22814	COPPER TRANSPORT PROTEIN ATOX1-RELATED	coord: 1..133 score: 8.6
None	No IPR available	PANTHER	PTHR22814:SF77	HEAVY-METAL-ASSOCIATED DOMAIN-CONTAINING PROTEIN	coord: 1..133 score: 8.6

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030001	metal ion transport
biological_process	GO:0098542	defense response to other organism
biological_process	GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway
biological_process	GO:0007178	transmembrane receptor protein serine/threonine kinase signaling pathway
biological_process	GO:0009864	induced systemic resistance, jasmonic acid mediated signaling pathway
biological_process	GO:0008152	metabolic process
biological_process	GO:0010046	response to mycotoxin
biological_process	GO:0006464	cellular protein modification process
biological_process	GO:0071229	cellular response to acid chemical
biological_process	GO:1901701	cellular response to oxygen-containing compound
biological_process	GO:0033554	cellular response to stress
biological_process	GO:0009755	hormone-mediated signaling pathway
biological_process	GO:0009697	salicylic acid biosynthetic process
biological_process	GO:0045087	innate immune response
biological_process	GO:0035556	intracellular signal transduction
biological_process	GO:0048519	negative regulation of biological process
biological_process	GO:0016310	phosphorylation
biological_process	GO:0031347	regulation of defense response
biological_process	GO:0043067	regulation of programmed cell death
biological_process	GO:0009651	response to salt stress
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0006073	cellular glucan metabolic process
biological_process	GO:0071555	cell wall organization
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:2000030	regulation of response to red or far red light
biological_process	GO:0010224	response to UV-B
biological_process	GO:0010310	regulation of hydrogen peroxide metabolic process
biological_process	GO:0009738	abscisic acid-activated signaling pathway
biological_process	GO:0000169	activation of MAPK activity involved in osmosensory signaling pathway
biological_process	GO:0010120	camalexin biosynthetic process
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0009595	detection of biotic stimulus
biological_process	GO:0010229	inflorescence development
biological_process	GO:0009867	jasmonic acid mediated signaling pathway
biological_process	GO:0001666	response to hypoxia
biological_process	GO:0043069	negative regulation of programmed cell death
biological_process	GO:0019684	photosynthesis, light reaction
biological_process	GO:0048481	plant ovule development
biological_process	GO:0080136	priming of cellular response to stress
biological_process	GO:0006612	protein targeting to membrane
biological_process	GO:0031348	negative regulation of defense response
biological_process	GO:0043900	regulation of multi-organism process
biological_process	GO:0035304	regulation of protein dephosphorylation
biological_process	GO:0009409	response to cold
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:2000038	regulation of stomatal complex development
biological_process	GO:2000037	regulation of stomatal complex patterning
biological_process	GO:0010363	regulation of plant-type hypersensitive response
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0000785	chromatin
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016020	membrane
cellular_component	GO:0005618	cell wall
cellular_component	GO:0048046	apoplast
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0016762	xyloglucan:xyloglucosyl transferase activity
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0019899	enzyme binding
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0030247	polysaccharide binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016773	phosphotransferase activity, alcohol group as acceptor
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004707	MAP kinase activity
molecular_function	GO:0003677	DNA binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo21785	0.81	Barchart \| Table
Spo23852	0.80	Barchart \| Table
Spo24818	0.79	Barchart \| Table
Spo14294	0.78	Barchart \| Table
Spo20380	0.78	Barchart \| Table
Spo14295	0.78	Barchart \| Table
Spo24940	0.77	Barchart \| Table
Spo00782	0.76	Barchart \| Table
Spo05814	0.76	Barchart \| Table
Spo27165	0.76	Barchart \| Table
Spo14902	0.75	Barchart \| Table
Spo18966	0.75	Barchart \| Table
Spo08769	0.75	Barchart \| Table
Spo19888	0.74	Barchart \| Table
Spo00611	0.74	Barchart \| Table
Spo23490	0.73	Barchart \| Table
Spo01137	0.73	Barchart \| Table
Spo01291	0.73	Barchart \| Table
Spo09635	0.73	Barchart \| Table
Spo21525	0.73	Barchart \| Table
Spo22033	0.73	Barchart \| Table
Spo18589	0.72	Barchart \| Table
Spo07077	0.72	Barchart \| Table
Spo03203	0.72	Barchart \| Table
Spo11776	0.71	Barchart \| Table
Spo05812	0.71	Barchart \| Table
Spo05464	0.71	Barchart \| Table
Spo08588	0.70	Barchart \| Table
Spo26899	0.70	Barchart \| Table
Spo15447	0.70	Barchart \| Table
Spo20562	0.70	Barchart \| Table
Spo09333	0.70	Barchart \| Table
Spo05781	0.70	Barchart \| Table
Spo22396	0.69	Barchart \| Table
Spo23842	0.69	Barchart \| Table
Spo01352	0.69	Barchart \| Table
Spo03107	0.69	Barchart \| Table
Spo21509	0.69	Barchart \| Table
Spo11975	0.69	Barchart \| Table
Spo22117	0.68	Barchart \| Table
Spo05817	0.68	Barchart \| Table
Spo01226	0.68	Barchart \| Table
Spo25350	0.68	Barchart \| Table
Spo17880	0.68	Barchart \| Table
Spo24808	0.68	Barchart \| Table
Spo01276	0.68	Barchart \| Table
Spo07181	0.68	Barchart \| Table
Spo21362	0.68	Barchart \| Table
Spo11512	0.68	Barchart \| Table
Spo26678	0.67	Barchart \| Table
Spo07646	0.67	Barchart \| Table
Spo08419	0.67	Barchart \| Table
Spo08855	0.67	Barchart \| Table
Spo09334	0.67	Barchart \| Table
Spo09636	0.67	Barchart \| Table
Spo11150	0.67	Barchart \| Table
Spo12145	0.67	Barchart \| Table
Spo12376	0.67	Barchart \| Table
Spo13478	0.67	Barchart \| Table
Spo16828	0.67	Barchart \| Table
Spo17725	0.67	Barchart \| Table
Spo02091	0.67	Barchart \| Table
Spo01686	0.67	Barchart \| Table
Spo20788	0.67	Barchart \| Table
Spo22363	0.67	Barchart \| Table
Spo05496	0.67	Barchart \| Table
Spo05047	0.66	Barchart \| Table
Spo07784	0.66	Barchart \| Table
Spo12884	0.66	Barchart \| Table
Spo23770	0.66	Barchart \| Table
Spo12328	0.66	Barchart \| Table
Spo05813	0.66	Barchart \| Table
Spo09152	0.66	Barchart \| Table
Spo01256	0.66	Barchart \| Table
Spo16648	0.66	Barchart \| Table
Spo19868	0.66	Barchart \| Table
Spo15866	0.66	Barchart \| Table
Spo07132	0.66	Barchart \| Table
Spo15750	0.66	Barchart \| Table
Spo14667	0.66	Barchart \| Table
Spo00748	0.66	Barchart \| Table
Spo04201	0.66	Barchart \| Table
Spo22164	0.66	Barchart \| Table
Spo20524	0.65	Barchart \| Table
Spo15947	0.65	Barchart \| Table
Spo20729	0.65	Barchart \| Table
Spo08594	0.65	Barchart \| Table
Spo19870	0.65	Barchart \| Table
Spo03184	0.65	Barchart \| Table
Spo24284	0.65	Barchart \| Table
Spo01629	0.65	Barchart \| Table
Spo12369	0.65	Barchart \| Table