Spo04380 (gene) | SpinachBase

Overview


Name	Spo04380
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Heavy metal transport/detoxification superfamily protein
Location	chr3 : 2636068 .. 2637845 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACTTCGTATTACTACTTGTCACATAAATAGACTCACCTTATCTCCCCTTAATTCTTACTTCACTACCTTCTTTTATTATTCTCTCTCCTCTCAATACAAATTCCACAAATCTCTAATCAAGGAAAGAAAATAAAAGATCACTGAAAATGCAGGTTAGATCTCTTACCTTTCAACTTGATCTTCTCTCTATTTTATATGTTTTGTTATTCCTTGATTAATATTATGTTTAGGGATAATTGTTGTGATTAGAGGATTGTAGGATGAATTAATGATAATTTTCCTATTTCCATCGGCTCACATTTCTGTAGCATGTTTGTGATGGGTTTACTGAATGTGTTTAATCAGTTACTCACACGTAAGTTGTCGCTAGACCTGATCAACTATAGCTCGATCTGTTCGTTTGACCCGACCCATAAAAGCCCAATTTGGCCCGAAAAGCCGTATCAAATGTATGGGTTTGGGTATGAGTTTTGTGTTAAGATCAGCCCGACCCGAATTCACATAATTGTCGCACGTTAGAAAAAAAACACGAATTTTGATCACATAATTGTCGCACATTAGAAAAAAAAAAAAAAGAGAAAATATCAACTTATAAGTTTAAGCCATTTGATTTTAGTAGTTTCTCACTTTTTCATTTAGGATTTTAAGTGGATTACGAACTCTCCTCCTCGTTATTGGGTTATTCTGTCTATTTTCCATTCAATCTAGTTTAGCAAGGTTTCTTATTCAAGTACTAATGATTTCCTTTCTTTGTTGGTTTTGTTTCAGAAATTGATAGTGAAATTGGATATCCACGATGATTTGAGCTGCAAGCAAAAGGCTATAAAACTGGTCTCTTCTATTTCTGGTAATTCCATGTCCCAAACTATCTTTTTCTTTTCAAATATACTTATCTCTTTTTAATACAAGTTCTTGTAAAACATCGTTCGACGACAGTTACTAACTGTCAGATCACATGTCATATCACCAATCTCCTTACACATTTGTCATACTATTAAGCATACTATGACAATAAATTAAGTGTAAGACGGTCTGATATTAAACTAGATTTTTTAAGTTTTAAAAATACTTTTGTAATAATAGAAATTTAATAATTGTGGTTCAAAATTTGCAGGGATTGATTCAATCTCAATGGACGGAAAGGAAAAGAAACTGACAGTAATAGGAGACATGGATCCTGTGGCAGTAGTGAAGAAATTAAGAAGGTACTACCATACTGAAATTGTCTCGGTTGGGCCTGCAAAAGAGCCTGAGAAGCCCAAAGAAAAGCCCAAAGACGAGCCCAAACCCATAGTCCCGGTAATGGATTTTATCCATGCCATGCAGGCCCATAACTCCAGTAATGCTACCTACATTGTTGATCCATGCTATTCTAGATACAATGGTTATTACAGAAGCGTGGAAGAAGATCCAAATGGTTGCGTTATTAGTTAACTATTCCTTTAAATTTAATATTTTTTTTGTTATTAATGGATAAGTTAAATTGTTAAGCTTGTTTAAGCAAGAATAATAGGATGAGTAACCTTCTAGAAAGTTCTTGTAATTGCGCCCCTTAAAGTGAACTTGTCTACTTTTAAGGTTTAAAGTTTAGCTCATAATTGAGTTGTGATTAGAGGGTAGGATTGAGCTGTAAAATTCTCCAATTTTTTTTACATTTGTGCCAATTATGTATTGATTATGTAACTAGAGATTAAAAGTCTCCATTTTTTTTAACATTTGAACCAATTGCTGTATTGATTATGTAACTAGAGATTAAATCTATAAAAGCCGTACTTAC

mRNA sequence

TACTTCGTATTACTACTTGTCACATAAATAGACTCACCTTATCTCCCCTTAATTCTTACTTCACTACCTTCTTTTATTATTCTCTCTCCTCTCAATACAAATTCCACAAATCTCTAATCAAGGAAAGAAAATAAAAGATCACTGAAAATGCAGAAATTGATAGTGAAATTGGATATCCACGATGATTTGAGCTGCAAGCAAAAGGCTATAAAACTGGTCTCTTCTATTTCTGGGATTGATTCAATCTCAATGGACGGAAAGGAAAAGAAACTGACAGTAATAGGAGACATGGATCCTGTGGCAGTAGTGAAGAAATTAAGAAGGTACTACCATACTGAAATTGTCTCGGTTGGGCCTGCAAAAGAGCCTGAGAAGCCCAAAGAAAAGCCCAAAGACGAGCCCAAACCCATAGTCCCGGTAATGGATTTTATCCATGCCATGCAGGCCCATAACTCCAGTAATGCTACCTACATTGTTGATCCATGCTATTCTAGATACAATGGTTATTACAGAAGCGTGGAAGAAGATCCAAATGGTTGCGTTATTAGTTAACTATTCCTTTAAATTTAATATTTTTTTTGTTATTAATGGATAAGTTAAATTGTTAAGCTTGTTTAAGCAAGAATAATAGGATGAGTAACCTTCTAGAAAGTTCTTGTAATTGCGCCCCTTAAAGTGAACTTGTCTACTTTTAAGGTTTAAAGTTTAGCTCATAATTGAGTTGTGATTAGAGGGTAGGATTGAGCTGTAAAATTCTCCAATTTTTTTTACATTTGTGCCAATTATGTATTGATTATGTAACTAGAGATTAAAAGTCTCCATTTTTTTTAACATTTGAACCAATTGCTGTATTGATTATGTAACTAGAGATTAAATCTATAAAAGCCGTACTTAC

Coding sequence (CDS)

ATGCAGAAATTGATAGTGAAATTGGATATCCACGATGATTTGAGCTGCAAGCAAAAGGCTATAAAACTGGTCTCTTCTATTTCTGGGATTGATTCAATCTCAATGGACGGAAAGGAAAAGAAACTGACAGTAATAGGAGACATGGATCCTGTGGCAGTAGTGAAGAAATTAAGAAGGTACTACCATACTGAAATTGTCTCGGTTGGGCCTGCAAAAGAGCCTGAGAAGCCCAAAGAAAAGCCCAAAGACGAGCCCAAACCCATAGTCCCGGTAATGGATTTTATCCATGCCATGCAGGCCCATAACTCCAGTAATGCTACCTACATTGTTGATCCATGCTATTCTAGATACAATGGTTATTACAGAAGCGTGGAAGAAGATCCAAATGGTTGCGTTATTAGTTAA

Protein sequence

MQKLIVKLDIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRYYHTEIVSVGPAKEPEKPKEKPKDEPKPIVPVMDFIHAMQAHNSSNATYIVDPCYSRYNGYYRSVEEDPNGCVIS

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo04380.1	Spo04380.1	mRNA

Homology

[Close]

BLAST of Spo04380.1 vs. NCBI nr
Match: gi|902217605|gb|KNA17794.1| (hypothetical protein SOVF_076910 [Spinacia oleracea])

HSP 1 Score: 269.6 bits (688), Expect = 2.900e-69
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 1


		  
Query: 1   MQKLIVKLDIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60
           MQKLIVKLDIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY
Sbjct: 1   MQKLIVKLDIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60

Query: 61  YHTEIVSVGPAKEPEKPKEKPKDEPKPIVPVMDFIHAMQAHNSSNATYIVDPCYSRYNGY 120
           YHTEIVSVGPAKEPEKPKEKPKDEPKPIVPVMDFIHAMQAHNSSNATYIVDPCYSRYNGY
Sbjct: 61  YHTEIVSVGPAKEPEKPKEKPKDEPKPIVPVMDFIHAMQAHNSSNATYIVDPCYSRYNGY 120

Query: 121 YRSVEEDPNGCVIS 135
           YRSVEEDPNGCVIS
Sbjct: 121 YRSVEEDPNGCVIS 134

[Close]

BLAST of Spo04380.1 vs. NCBI nr
Match: gi|902217606|gb|KNA17795.1| (hypothetical protein SOVF_076920 [Spinacia oleracea])

HSP 1 Score: 260.0 bits (663), Expect = 2.300e-66
Identity = 129/133 (96.99%), Postives = 131/133 (98.50%), Query Frame = 1


		  
Query: 1   MQKLIVKLDIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60
           MQKLIVKL+IHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY
Sbjct: 1   MQKLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60

Query: 61  YHTEIVSVGPAKEPEKPKEKPKDEPKPIVPVMDFIHAMQAHNSSNATYIVDPCYSRYNGY 120
           YHTEIVSVGPAKEPEKP EKPKDEPKP+VPVMDFIHAMQAHNSSNATYIVDP YSRYNGY
Sbjct: 61  YHTEIVSVGPAKEPEKPNEKPKDEPKPVVPVMDFIHAMQAHNSSNATYIVDPFYSRYNGY 120

Query: 121 YRSVEEDPNGCVI 134
           YRSVEEDPNGCVI
Sbjct: 121 YRSVEEDPNGCVI 133

[Close]

BLAST of Spo04380.1 vs. NCBI nr
Match: gi|731321939|ref|XP_010671618.1| (PREDICTED: uncharacterized protein LOC104888367 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 143.7 bits (361), Expect = 2.400e-31
Identity = 77/133 (57.89%), Postives = 98/133 (73.68%), Query Frame = 1


		  
Query: 1   MQKLIVKLDIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60
           MQK+++KLD+HD+LSCK+ A+KLVSS+ G+DSIS+D KE+KLTVIGDMDP+AVVKKLR+ 
Sbjct: 1   MQKVVLKLDMHDNLSCKKTALKLVSSVPGLDSISVDMKEQKLTVIGDMDPMAVVKKLRKN 60

Query: 61  YHTEIVSVGPAKEPEKPKEKPKDEPKPIVPVMDFIHAMQAHNSSNATYIVDPCYSRYNGY 120
           ++TE+VSVGPAKEPEKPK            V DF++ MQA+N S            YN  
Sbjct: 61  FYTELVSVGPAKEPEKPKS-----------VADFVNTMQAYNYSYG----------YNPP 112

Query: 121 YRSVEEDPNGCVI 134
           Y  VE++PNGCVI
Sbjct: 121 YYYVEQNPNGCVI 112

[Close]

BLAST of Spo04380.1 vs. NCBI nr
Match: gi|870865102|gb|KMT16169.1| (hypothetical protein BVRB_3g053300 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 143.3 bits (360), Expect = 3.100e-31
Identity = 78/133 (58.65%), Postives = 101/133 (75.94%), Query Frame = 1


		  
Query: 1   MQKLIVKLDIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60
           M+K+++KLD+HD+LSCK+ A+KLVSS+ G+DSIS+D K ++LTVIGD+DPVAVVKKL++ 
Sbjct: 1   MKKVVLKLDMHDNLSCKKTALKLVSSVPGLDSISVDMKVQQLTVIGDVDPVAVVKKLKKN 60

Query: 61  YHTEIVSVGPAKEPEKPKEKPKDEPKPIVPVMDFIHAMQAHNSSNATYIVDPCYSRYNGY 120
           ++ E+VSVGPAKEPEKPK     EP P+V V D++H   AHN S   Y     Y   NGY
Sbjct: 61  FYVELVSVGPAKEPEKPKPA---EPIPVVQVNDYVH---AHNYSYG-YNHPNYYVYSNGY 120

Query: 121 YRSVEEDPNGCVI 134
            R VEE+PN CVI
Sbjct: 121 VRCVEENPNACVI 126

[Close]

BLAST of Spo04380.1 vs. NCBI nr
Match: gi|731321941|ref|XP_010671619.1| (PREDICTED: uncharacterized protein LOC104888368 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 136.3 bits (342), Expect = 3.800e-29
Identity = 70/103 (67.96%), Postives = 86/103 (83.50%), Query Frame = 1


		  
Query: 1   MQKLIVKLDIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60
           MQK+++KLD+HDD +CK+KA+KLVSS++G+DSISMD KEKKLTVIGDMDPVAVV KLR+ 
Sbjct: 1   MQKVVLKLDVHDDKNCKKKALKLVSSVTGLDSISMDMKEKKLTVIGDMDPVAVVTKLRKI 60

Query: 61  YHTEIVSVGPAKEPEKPKEKPKDEPKPIVPVMDFIHAMQAHNS 104
           Y+TEIVSVGPAK+PEKPKE   +EPK        IH M+ +NS
Sbjct: 61  YNTEIVSVGPAKDPEKPKE--PEEPKKTEDPTPVIHVMRTYNS 101

[Close]

BLAST of Spo04380.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RFP2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_076910 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 2.000e-69
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 1


		  
Query: 1   MQKLIVKLDIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60
           MQKLIVKLDIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY
Sbjct: 1   MQKLIVKLDIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60

Query: 61  YHTEIVSVGPAKEPEKPKEKPKDEPKPIVPVMDFIHAMQAHNSSNATYIVDPCYSRYNGY 120
           YHTEIVSVGPAKEPEKPKEKPKDEPKPIVPVMDFIHAMQAHNSSNATYIVDPCYSRYNGY
Sbjct: 61  YHTEIVSVGPAKEPEKPKEKPKDEPKPIVPVMDFIHAMQAHNSSNATYIVDPCYSRYNGY 120

Query: 121 YRSVEEDPNGCVIS 135
           YRSVEEDPNGCVIS
Sbjct: 121 YRSVEEDPNGCVIS 134

[Close]

BLAST of Spo04380.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RE63_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_076920 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 1.600e-66
Identity = 129/133 (96.99%), Postives = 131/133 (98.50%), Query Frame = 1


		  
Query: 1   MQKLIVKLDIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60
           MQKLIVKL+IHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY
Sbjct: 1   MQKLIVKLEIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60

Query: 61  YHTEIVSVGPAKEPEKPKEKPKDEPKPIVPVMDFIHAMQAHNSSNATYIVDPCYSRYNGY 120
           YHTEIVSVGPAKEPEKP EKPKDEPKP+VPVMDFIHAMQAHNSSNATYIVDP YSRYNGY
Sbjct: 61  YHTEIVSVGPAKEPEKPNEKPKDEPKPVVPVMDFIHAMQAHNSSNATYIVDPFYSRYNGY 120

Query: 121 YRSVEEDPNGCVI 134
           YRSVEEDPNGCVI
Sbjct: 121 YRSVEEDPNGCVI 133

[Close]

BLAST of Spo04380.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CQX9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g053310 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.700e-31
Identity = 77/133 (57.89%), Postives = 98/133 (73.68%), Query Frame = 1


		  
Query: 1   MQKLIVKLDIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60
           MQK+++KLD+HD+LSCK+ A+KLVSS+ G+DSIS+D KE+KLTVIGDMDP+AVVKKLR+ 
Sbjct: 1   MQKVVLKLDMHDNLSCKKTALKLVSSVPGLDSISVDMKEQKLTVIGDMDPMAVVKKLRKN 60

Query: 61  YHTEIVSVGPAKEPEKPKEKPKDEPKPIVPVMDFIHAMQAHNSSNATYIVDPCYSRYNGY 120
           ++TE+VSVGPAKEPEKPK            V DF++ MQA+N S            YN  
Sbjct: 61  FYTELVSVGPAKEPEKPKS-----------VADFVNTMQAYNYSYG----------YNPP 112

Query: 121 YRSVEEDPNGCVI 134
           Y  VE++PNGCVI
Sbjct: 121 YYYVEQNPNGCVI 112

[Close]

BLAST of Spo04380.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CVQ4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g053300 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 2.200e-31
Identity = 78/133 (58.65%), Postives = 101/133 (75.94%), Query Frame = 1


		  
Query: 1   MQKLIVKLDIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60
           M+K+++KLD+HD+LSCK+ A+KLVSS+ G+DSIS+D K ++LTVIGD+DPVAVVKKL++ 
Sbjct: 1   MKKVVLKLDMHDNLSCKKTALKLVSSVPGLDSISVDMKVQQLTVIGDVDPVAVVKKLKKN 60

Query: 61  YHTEIVSVGPAKEPEKPKEKPKDEPKPIVPVMDFIHAMQAHNSSNATYIVDPCYSRYNGY 120
           ++ E+VSVGPAKEPEKPK     EP P+V V D++H   AHN S   Y     Y   NGY
Sbjct: 61  FYVELVSVGPAKEPEKPKPA---EPIPVVQVNDYVH---AHNYSYG-YNHPNYYVYSNGY 120

Query: 121 YRSVEEDPNGCVI 134
            R VEE+PN CVI
Sbjct: 121 VRCVEENPNACVI 126

[Close]

BLAST of Spo04380.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FJU5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g053320 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.700e-29
Identity = 70/103 (67.96%), Postives = 86/103 (83.50%), Query Frame = 1


		  
Query: 1   MQKLIVKLDIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60
           MQK+++KLD+HDD +CK+KA+KLVSS++G+DSISMD KEKKLTVIGDMDPVAVV KLR+ 
Sbjct: 1   MQKVVLKLDVHDDKNCKKKALKLVSSVTGLDSISMDMKEKKLTVIGDMDPVAVVTKLRKI 60

Query: 61  YHTEIVSVGPAKEPEKPKEKPKDEPKPIVPVMDFIHAMQAHNS 104
           Y+TEIVSVGPAK+PEKPKE   +EPK        IH M+ +NS
Sbjct: 61  YNTEIVSVGPAKDPEKPKE--PEEPKKTEDPTPVIHVMRTYNS 101

[Close]

BLAST of Spo04380.1 vs. TAIR (Arabidopsis)
Match: AT1G01490.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 99.8 bits (247), Expect = 1.400e-21
Identity = 57/87 (65.52%), Postives = 72/87 (82.76%), Query Frame = 1


		  
Query: 1  MQKLIVKLDIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60
          M+K+++KLD+HDD + KQKA+K VS++ GIDSI+MD KEKKLTVIG +DPV VV KLR+Y
Sbjct: 1  MKKIVLKLDLHDDRA-KQKALKTVSTLPGIDSIAMDMKEKKLTVIGTVDPVNVVSKLRKY 60

Query: 61 Y-HTEIVSVGPAKEPEKPKEKPKDEPK 87
          +  T+IV VGPAKEPEK K   K+EPK
Sbjct: 61 WPMTDIVLVGPAKEPEKEK---KEEPK 83

[Close]

BLAST of Spo04380.1 vs. TAIR (Arabidopsis)
Match: AT5G52740.1 (Copper transport protein family)

HSP 1 Score: 90.9 bits (224), Expect = 6.500e-19
Identity = 55/134 (41.04%), Postives = 79/134 (58.96%), Query Frame = 1


		  
Query: 1   MQKLIVKLDIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRY 60
           MQ +++KLD+H + + KQKA+  V  +SG++S+ +  K+ KLTV G++D   +VKKL++ 
Sbjct: 1   MQVVVLKLDVHCEKT-KQKAMSTVCCLSGVNSVEV--KDGKLTVTGEIDAYMIVKKLKKI 60

Query: 61  YHTEIVSVGPAKEPEKPKEKPKDEPKPIVPVMDFIHAMQAHNSSNATYIVDPCYSRYNGY 120
            HTE +SVGP KEPE  K+KP D  KP     D I+           + V PC   Y+ +
Sbjct: 61  CHTEFISVGPVKEPE--KKKPDDPKKPETKPPDVIY-----------HYVPPCPPYYHNF 118

Query: 121 YRSVEEDPNGCVIS 135
                EDPN CV S
Sbjct: 121 NGCYNEDPNACVTS 118

[Close]

BLAST of Spo04380.1 vs. TAIR (Arabidopsis)
Match: AT5G23760.1 (Copper transport protein family)

HSP 1 Score: 74.3 bits (181), Expect = 6.300e-14
Identity = 44/87 (50.57%), Postives = 62/87 (71.26%), Query Frame = 1


		  
Query: 2  QKLIVKLDIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRYY 61
          QK+++K+    D   KQKAI+  + I G+DSI+ D K++KLTVIG MD VAVVKKL++  
Sbjct: 3  QKVVLKVLTMTDDKTKQKAIEAAADIFGVDSIAADMKDQKLTVIGLMDAVAVVKKLKKVG 62

Query: 62 HTEIVSVGPAKE--PEKPKEKPKDEPK 87
            +++SVGPAKE   E+ KE+ K+E K
Sbjct: 63 KVDLISVGPAKEEKKEEKKEEKKEEKK 89

[Close]

BLAST of Spo04380.1 vs. TAIR (Arabidopsis)
Match: AT5G52750.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 68.2 bits (165), Expect = 4.500e-12
Identity = 50/141 (35.46%), Postives = 73/141 (51.77%), Query Frame = 1


		  
Query: 3   KLIVKLDIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRYYH 62
           K +++L IH++   ++KA   VS   G+ SI+MD K  K+TV+G++D   +V KLR+  +
Sbjct: 5   KAVLQLSIHEE-RIRKKAFVTVSRCPGVTSITMDDKTGKMTVVGEVDVPVIVMKLRKLCN 64

Query: 63  TEIVSVGPAKEPEKPKE-----KPKDEPKPIVPVMDFIHAMQAHNSSNATYIVDPCYSRY 122
           TE+VSV   K PEK  E      PK  P P  P       +Q +N     Y  +P Y+  
Sbjct: 65  TELVSVEVVKPPEKKPEPEKPAPPKPAPAPAKPAEIVAWPVQMNN----PYQYNPAYA-- 124

Query: 123 NGYYRSVEE-----DPNGCVI 134
           N YY+         D + CVI
Sbjct: 125 NSYYQPYGNSRFVTDESNCVI 138

[Close]

BLAST of Spo04380.1 vs. TAIR (Arabidopsis)
Match: AT5G52760.1 (Copper transport protein family)

HSP 1 Score: 63.9 bits (154), Expect = 8.500e-11
Identity = 50/135 (37.04%), Postives = 72/135 (53.33%), Query Frame = 1


		  
Query: 5   IVKLDIHDDLSCKQKAIKLVSSISGIDSISMDGKEKKLTVIGDMDPVAVVKKLRRYYHTE 64
           +++L IH++ + ++KA+  VS  SG+ SI+MD K  K+T++G++D  AVV KLR+  +TE
Sbjct: 7   VLQLSIHEERT-RKKALVTVSRFSGVTSITMD-KSGKMTIVGEVDVPAVVMKLRKLCNTE 66

Query: 65  IVSVGPAKEPEKPKEKPKDEPKPIVPVMDFIHAMQAHNSSNATYIVDPCYSRYNGYYRS- 124
           IVSV   K P K  E  K       PV             N  Y  +P Y+  N YY   
Sbjct: 67  IVSVDDVKPPVKKPEPEKPAESIAYPV-----------PMNYAYQFNPAYA--NSYYHQP 125

Query: 125 -----VEEDPNGCVI 134
                V ++PN CVI
Sbjct: 127 YGNCRVVDEPN-CVI 125

The following BLAST results are available for this feature:

BLAST of Spo04380.1 vs. NCBI nr
BLAST of Spo04380.1 vs. UniProtKB/TrEMBL
BLAST of Spo04380.1 vs. ExPASy Swiss-Prot
BLAST of Spo04380.1 vs. TAIR (Arabidopsis)

BLAST of Spo04380.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902217605\|gb\|KNA17794.1\|	2.9e-69	100.	hypothetical protein SOVF_0769...	[more]
gi\|902217606\|gb\|KNA17795.1\|	2.3e-66	96.9	hypothetical protein SOVF_0769...	[more]
gi\|731321939\|ref\|XP_010671618.1\|	2.4e-31	57.8	PREDICTED: uncharacterized pro...	[more]
gi\|870865102\|gb\|KMT16169.1\|	3.1e-31	58.6	hypothetical protein BVRB_3g05...	[more]
gi\|731321941\|ref\|XP_010671619.1\|	3.8e-29	67.9	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo04380.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RFP2_SPIOL	2.0e-69	100.	Uncharacterized protein OS=Spi...	[more]
A0A0K9RE63_SPIOL	1.6e-66	96.9	Uncharacterized protein OS=Spi...	[more]
A0A0J8CQX9_BETVU	1.7e-31	57.8	Uncharacterized protein OS=Bet...	[more]
A0A0J8CVQ4_BETVU	2.2e-31	58.6	Uncharacterized protein OS=Bet...	[more]
A0A0J8FJU5_BETVU	2.7e-29	67.9	Uncharacterized protein OS=Bet...	[more]

BLAST of Spo04380.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo04380.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G01490.1	1.4e-21	65.5	Heavy metal transport/detoxifi...	[more]
AT5G52740.1	6.5e-19	41.0	Copper transport protein famil...	[more]
AT5G23760.1	6.3e-14	50.5	Copper transport protein famil...	[more]
AT5G52750.1	4.5e-12	35.4	Heavy metal transport/detoxifi...	[more]
AT5G52760.1	8.5e-11	37.0	Copper transport protein famil...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 15..58 score: 2.
IPR006121	Heavy metal-associated domain, HMA	unknown	SSF55008	HMA, heavy metal-associated domain	coord: 15..60 score: 1.9
None	No IPR available	GENE3D	3.30.70.100		coord: 15..62 score: 6.
None	No IPR available	PANTHER	PTHR22814	COPPER TRANSPORT PROTEIN ATOX1-RELATED	coord: 1..133 score: 2.4
None	No IPR available	PANTHER	PTHR22814:SF77	HEAVY-METAL-ASSOCIATED DOMAIN-CONTAINING PROTEIN	coord: 1..133 score: 2.4

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030001	metal ion transport
molecular_function	GO:0046872	metal ion binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo08822	0.66	Barchart \| Table